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[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8I9W8_CHLRE
          Length = 270

 Score =  207 bits (528), Expect(2) = 2e-59
 Identities = 104/106 (98%), Positives = 104/106 (98%)
 Frame = +1

Query: 235 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 414
           GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR
Sbjct: 20  GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 79

Query: 415 QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPXXMGT 552
           QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP  MGT
Sbjct: 80  QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPPPMGT 125

 Score = 45.8 bits (107), Expect(2) = 2e-59
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +3

Query: 84  MRTQNSVMECPRSMVGRVIGEARRRVE 164
           MRTQNSVMECPRSMVGRVIG++   V+
Sbjct: 1   MRTQNSVMECPRSMVGRVIGKSGETVK 27

[2][TOP]
>UniRef100_A8JED3 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JED3_CHLRE
          Length = 206

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 52/118 (44%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +1

Query: 190 CTANFRLLRRWAYPT--------GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYS 345
           C    +LL+  A  T        G+ G+T+KALQT+TGA IQIDQ               
Sbjct: 12  CVGRLQLLKGQARQTSTLGFGTAGRDGDTIKALQTFTGALIQIDQ--------------- 56

Query: 346 VNLAVSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLY 519
                  + DI+RG+FKGFALLRQAT  +N     P     +PVYAPGYGL+P SQLY
Sbjct: 57  -------VHDIVRGTFKGFALLRQATGHSNRG---PQPLSNKPVYAPGYGLVPPSQLY 104

[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
          Length = 1640

 Score = 53.5 bits (127), Expect(2) = 9e-09
 Identities = 39/105 (37%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
 Frame = +1

Query: 235  GKSGETVKALQTYTGATIQIDQSV-DPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALL 411
            GK GET+K LQ ++GA +Q+DQ+V DP  V I+GA  SV  A   +  II G       +
Sbjct: 1469 GKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAEAVAAIIAGGPTAQYAV 1528

Query: 412  RQ-------------ATRPANGRNGYP-AFTEPRPVYAPGYGLIP 504
             Q             A     G  GYP A       Y PGYG  P
Sbjct: 1529 PQAGAGYGGGYGGYGAIGGYGGYGGYPQAAAAAYAGYYPGYGAYP 1573

 Score = 30.0 bits (66), Expect(2) = 9e-09
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 93   QNSVMECPRSMVGRVIGEARRRVE 164
            ++ ++ECP++MVGRVIG+    ++
Sbjct: 1453 ESRIVECPKNMVGRVIGKGGETIK 1476

[4][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8T9_9CHLO
          Length = 156

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +1

Query: 235 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDII 381
           G+ GET+K LQ+ TGA IQIDQSV P  ++I+G  Y V+ A   + D+I
Sbjct: 108 GRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVDVI 156

 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 102 VMECPRSMVGRVIGEARRRVE 164
           ++ECP+ MVGRVIG     ++
Sbjct: 95  IVECPKDMVGRVIGRGGETIK 115

[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
           Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
          Length = 511

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +1

Query: 235 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIR--GSFKGFAL 408
           GK GET+K LQ    A+IQIDQS  P +V+I+G ++++  A   I D+IR  G   G   
Sbjct: 302 GKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIEDLIRSTGPPPGGMG 361

Query: 409 LRQATRPANGRNGYPAFTEPRPVYAPGYG 495
           +   +RP  G      + +  P  A GYG
Sbjct: 362 MGGGSRPPYG----APYGQQYPGGAGGYG 386

 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 102 VMECPRSMVGRVIGEARRRVE 164
           V+ECP++MVGR+IG+    ++
Sbjct: 289 VLECPKTMVGRIIGKGGETIK 309

[6][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
          Length = 393

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = +1

Query: 235 GKSGETVKALQTYTGATIQIDQS---VDPTRVSISGAAYSVNLAVSIITDIIRGS 390
           G+ GET+K+LQ  +GA + IDQS    +P RV+ISG   SV+ A  ++ +++ G+
Sbjct: 147 GRGGETIKSLQATSGAHVAIDQSGADGEPKRVTISGTRKSVDAASELVENLLLGT 201

 Score = 33.1 bits (74), Expect(2) = 3e-07
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = +3

Query: 60  NAPKSRQKMRTQNSV----MECPRSMVGRVIGEARRRVE 164
           NA + R ++  +N +    +ECP+SMVGR+IG     ++
Sbjct: 116 NAERERLELERENEIVTRSLECPQSMVGRIIGRGGETIK 154