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[1][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 286 bits (733), Expect = 4e-76
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ
Sbjct: 71 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 130
Query: 182 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 361
AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG
Sbjct: 131 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 190
Query: 362 WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA 460
WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA
Sbjct: 191 WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA 223
Score = 286 bits (733), Expect = 4e-76
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 201
Query: 182 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 361
AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG
Sbjct: 202 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 261
Query: 362 WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA 460
WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA
Sbjct: 262 WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA 294
Score = 264 bits (674), Expect = 3e-69
Identities = 141/142 (99%), Positives = 141/142 (99%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 272
Query: 182 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 361
AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG
Sbjct: 273 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 332
Query: 362 WVGFNIFGSLQAQLNQMDAKNK 427
WVGFNIFGSLQAQL QMDAKNK
Sbjct: 333 WVGFNIFGSLQAQLRQMDAKNK 354
Score = 248 bits (634), Expect = 1e-64
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +2
Query: 35 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 214
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 11 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 70
Query: 215 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 394
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ
Sbjct: 71 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 130
Query: 395 AQLNQMDAKNKRAVPAAVGMGA 460
AQLNQMDAKNKRAVPAAVGMGA
Sbjct: 131 AQLNQMDAKNKRAVPAAVGMGA 152
[2][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 263 bits (672), Expect = 4e-69
Identities = 140/142 (98%), Positives = 142/142 (100%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPV+GWVGFNIFGSLQ
Sbjct: 119 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQ 178
Query: 182 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 361
AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG
Sbjct: 179 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 238
Query: 362 WVGFNIFGSLQAQLNQMDAKNK 427
WVGFNIFGSLQAQL+QMDAKNK
Sbjct: 239 WVGFNIFGSLQAQLSQMDAKNK 260
Score = 247 bits (631), Expect = 3e-64
Identities = 129/142 (90%), Positives = 137/142 (96%)
Frame = +2
Query: 35 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 214
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 59 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 118
Query: 215 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 394
RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPV+GWVGFNIFGSLQ
Sbjct: 119 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQ 178
Query: 395 AQLNQMDAKNKRAVPAAVGMGA 460
AQLNQMDAKNKRAVPAAVGMGA
Sbjct: 179 AQLNQMDAKNKRAVPAAVGMGA 200
[3][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 102 bits (254), Expect = 1e-20
Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 5/148 (3%)
Frame = +2
Query: 2 RAVPAAVG-MGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSL 178
+ V A VG + AAA + ++A+A+TE LA D R+AI VPV+GWVG+NI G
Sbjct: 46 KGVAAGVGGLSAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPG 104
Query: 179 QAQLNQM--DAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVP 352
QL +M DA K+ V A VG+ AAA + ++A+A+TE LA D R+AI VP
Sbjct: 105 LKQLEKMQQDAAKKKGVAAGVGLSAAALMGMPEAADAATEAMQLADLDARIAIFGA-FVP 163
Query: 353 VIGWVGFNIFGSLQAQLNQM--DAKNKR 430
V+GWVG+NI G QL +M DA K+
Sbjct: 164 VLGWVGYNILGPGLKQLEKMQQDAAKKK 191
Score = 92.4 bits (228), Expect = 1e-17
Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +2
Query: 89 LAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQM--DAKNKRAVPAAVG-MGAAASL 259
LA D R+AI VPV+GWVG+NI G QL +M DA K+ V A VG + AAA +
Sbjct: 3 LADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQDAAKKKGVAAGVGGLSAAALM 61
Query: 260 LFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQM--DAKNKRA 433
++A+A+TE LA D R+AI VPV+GWVG+NI G QL +M DA K+
Sbjct: 62 GMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQDAAKKKG 120
Query: 434 VPAAVGMGA 460
V A VG+ A
Sbjct: 121 VAAGVGLSA 129
[4][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 97.8 bits (242), Expect = 3e-19
Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +2
Query: 38 ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDA-KNK 214
A++ ++SA AS +I LA DNRV L L+P IGWV FNI LQ LNQ+D +
Sbjct: 13 AAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQPALNQVDKMRGA 69
Query: 215 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 394
+A+ A G+GAAA+L+ A A+A+ E A +A SD R I+ LL+P IGWV FNI L+
Sbjct: 70 KALVAGAGLGAAATLMAAPHADAAQEFAQIADSDARGLIIVGLLLPAIGWVLFNI---LR 126
Query: 395 AQLNQMD 415
LNQ++
Sbjct: 127 PALNQIE 133
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+A+ A G+GAAA+L+ A A+A+ E A +A SD R I+ LL+P IGWV FNI L+
Sbjct: 70 KALVAGAGLGAAATLMAAPHADAAQEFAQIADSDARGLIIVGLLLPAIGWVLFNI---LR 126
Query: 182 AQLNQMD 202
LNQ++
Sbjct: 127 PALNQIE 133
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMD-AKNK 427
A++ ++SA AS +I LA DNRV L L+P IGWV FNI LQ LNQ+D +
Sbjct: 13 AAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQPALNQVDKMRGA 69
Query: 428 RAVPAAVGMGA 460
+A+ A G+GA
Sbjct: 70 KALVAGAGLGA 80
[5][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 97.4 bits (241), Expect = 4e-19
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+++ A G+GA A L+ A A+A+ EIA +A SD R I+ LL+P +GWV FNI
Sbjct: 129 KSLVAGAGLGALA-LVAAPHADAAQEIAQVADSDARGLIIIGLLLPAVGWVLFNILRPAL 187
Query: 182 AQLNQMDAKN-------KRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILAT 340
Q+ +M + KR V A+G+G A SL A A+A+ EIATLA SD+R I+
Sbjct: 188 NQIEKMQDQGNAAAITRKRGVIGALGLGTA-SLFLAPHADAAQEIATLADSDSRGLIIIG 246
Query: 341 LLVPVIGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 451
LL+P +GWV FNI Q+N + N P G
Sbjct: 247 LLLPAVGWVLFNILKPALNQINNIVEGNDTGAPVKRG 283
Score = 94.7 bits (234), Expect = 3e-18
Identities = 69/160 (43%), Positives = 89/160 (55%), Gaps = 13/160 (8%)
Frame = +2
Query: 17 AVGMGAAASLLFA-----QSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+VG A A +FA +SA AS +I LA DNRV L LVP IGWV FNI L+
Sbjct: 60 SVGANALAGAMFAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNI---LK 116
Query: 182 AQLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVI 358
LNQ+D K +++ A G+GA A L+ A A+A+ EIA +A SD R I+ LL+P +
Sbjct: 117 PALNQVDKMKAAKSLVAGAGLGALA-LVAAPHADAAQEIAQVADSDARGLIIIGLLLPAV 175
Query: 359 GWVGFNI-------FGSLQAQLNQMDAKNKRAVPAAVGMG 457
GWV FNI +Q Q N KR V A+G+G
Sbjct: 176 GWVLFNILRPALNQIEKMQDQGNAAAITRKRGVIGALGLG 215
Score = 89.7 bits (221), Expect = 9e-17
Identities = 63/150 (42%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
R V A+G+G A SL A A+A+ EIATLA SD+R I+ LL+P +GWV FNI
Sbjct: 206 RGVIGALGLGTA-SLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 182 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTEIATLAASDNRV 325
Q+N + N P A G+ AAA SLL A A+A + +D R
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQEIAQLGADTRP 324
Query: 326 AILATLLVPVIGWVGFNIFGSLQAQLNQMD 415
IL +L P IGWV FNI L+ LNQ+D
Sbjct: 325 LILLFILAPAIGWVLFNI---LKPALNQVD 351
[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 95.1 bits (235), Expect = 2e-18
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = +2
Query: 26 MGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDA 205
M AA++LFA A A+ E+ LA D R+AI + PV+GWV +NI G Q M
Sbjct: 55 MSLAATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQK 113
Query: 206 KN--KRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNI 379
KN + V A G+ AAA L ++++A+ ++ LA D R+AI + PV+GWV +NI
Sbjct: 114 KNAKSKGVLAGAGLSAAALLGMPEASDAAEKLGDLAGIDGRIAIF-FVFAPVLGWVAYNI 172
Query: 380 FGSLQAQLNQMDAKNKRAVPAAVGMG 457
G Q M KN ++ G G
Sbjct: 173 LGPGLRQFEDMQKKNAKSKGVLAGAG 198
Score = 86.3 bits (212), Expect = 1e-15
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+ V A G+ AAA L ++++A+ ++ LA D R+AI + PV+GWV +NI G
Sbjct: 119 KGVLAGAGLSAAALLGMPEASDAAEKLGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGL 177
Query: 182 AQLNQMDAKN--KRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPV 355
Q M KN + V A G+ AAA L ++++A+ ++ LA D R+AI + PV
Sbjct: 178 RQFEDMQKKNAKSKGVLAGAGLSAAALLGMPEASDAAEKLGDLAGIDGRIAIF-FVFAPV 236
Query: 356 IGWVGFNIFGSLQAQLNQMDAKNKRAV 436
+GWV +NI G + Q ++D +R++
Sbjct: 237 LGWVAYNILGPERGQ--EVDGLRRRSL 261
[7][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 93.2 bits (230), Expect = 8e-18
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+ V A G+ AAA + ++++A+ ++ LA D R+AI + PV+GWV +NI G
Sbjct: 200 KGVLAGAGLSAAALMGMPEASDAAEQLGELAGIDGRIAIFF-VFAPVLGWVAYNILGPGL 258
Query: 182 AQLNQMD--AKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPV 355
Q M A K+ V A G+ AAA + ++++A+ EI TLA D R+AI + PV
Sbjct: 259 RQFEDMQKAAAKKKGVLAGAGLSAAALMGMPEASDAAQEIGTLAGIDGRIAIF-FVFAPV 317
Query: 356 IGWVGFNIFGSLQAQLNQMD--AKNKRAVPAAVGMGA 460
+GWV +NI G Q M A K+ V A G+ A
Sbjct: 318 LGWVAYNILGPGLRQFEDMQKAAAKKKGVLAGAGLSA 354
Score = 87.8 bits (216), Expect = 3e-16
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+ V A G+ AAA + ++++A+ EI TLA D R+AI + PV+GWV +NI G
Sbjct: 272 KGVLAGAGLSAAALMGMPEASDAAQEIGTLAGIDGRIAIFF-VFAPVLGWVAYNILGPGL 330
Query: 182 AQLNQMD--AKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPV 355
Q M A K+ V A G+ AAA + ++++A+ ++ LA D R+AI + PV
Sbjct: 331 RQFEDMQKAAAKKKGVLAGAGLSAAALMGMPEASDAAEQLGELAGIDGRIAIF-FVFAPV 389
Query: 356 IGWVGFNIFGSLQAQLNQM 412
+GWV +NI G Q M
Sbjct: 390 LGWVAYNILGPGLRQFEDM 408
Score = 85.9 bits (211), Expect = 1e-15
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A G+ A+A + ++++A+ +A LA D R+AI + PV+GWV +NI G Q
Sbjct: 133 AGGLTASALMGMPEASDAAQNVADLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFED 191
Query: 197 MD--AKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVG 370
M A K+ V A G+ AAA + ++++A+ ++ LA D R+AI + PV+GWV
Sbjct: 192 MQKAAAKKKGVLAGAGLSAAALMGMPEASDAAEQLGELAGIDGRIAIF-FVFAPVLGWVA 250
Query: 371 FNIFGSLQAQLNQMD--AKNKRAVPAAVGMGA 460
+NI G Q M A K+ V A G+ A
Sbjct: 251 YNILGPGLRQFEDMQKAAAKKKGVLAGAGLSA 282
Score = 82.4 bits (202), Expect = 1e-14
Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Frame = +2
Query: 26 MGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDA 205
M AAS+ FA A+A+ E+ A D R I + PV+GWV +NI QL M A
Sbjct: 60 MATAASMFFADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQA 118
Query: 206 KN-----KRAVPA-AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWV 367
N KRA A A G+ A+A + ++++A+ +A LA D R+AI + PV+GWV
Sbjct: 119 VNAKSSKKRAAGALAGGLTASALMGMPEASDAAQNVADLAGIDGRIAIF-FVFAPVLGWV 177
Query: 368 GFNIFGSLQAQLNQMD--AKNKRAVPAAVGMGA 460
+NI G Q M A K+ V A G+ A
Sbjct: 178 AYNILGPGLRQFEDMQKAAAKKKGVLAGAGLSA 210
[8][TOP]
>UniRef100_A9TFS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TFS8_PHYPA
Length = 130
Score = 89.4 bits (220), Expect = 1e-16
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 38 ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDA-KNK 214
A++ ++SA AS +I LA DNRV L LVP IGWV FNI L+ LNQ+D ++
Sbjct: 7 AAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNI---LKPALNQVDKMRSA 63
Query: 215 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 394
+A+ A G+G+ A +L A A+A+ EIA +A SD R I+ LL+P IGWV FNI L+
Sbjct: 64 KALVAGAGLGSLA-MLAAPHADAAQEIAQVAESDARGLIIIGLLLPAIGWVLFNI---LR 119
Query: 395 AQLNQMD 415
LNQ +
Sbjct: 120 PALNQFE 126
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMD-AKNK 427
A++ ++SA AS +I LA DNRV L LVP IGWV FNI L+ LNQ+D ++
Sbjct: 7 AAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNI---LKPALNQVDKMRSA 63
Query: 428 RAVPAAVGMGA 460
+A+ A G+G+
Sbjct: 64 KALVAGAGLGS 74
[9][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 87.8 bits (216), Expect = 3e-16
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 2 RAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQ 181
+ +P +G+ AAA + A+A+TE+ A D R+ I VPV+GWV +NI
Sbjct: 134 KGIPLGLGLSAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGL 192
Query: 182 AQLNQMDAKN--KRAVPAAV-GMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVP 352
Q+ M KN KR V A V G+ AAA L + A+A+TE+ A D R+ I VP
Sbjct: 193 NQIEDMQKKNAKKRGVAAGVTGLSAAALLGMPEQADAATELMQTAGLDARILIFGA-FVP 251
Query: 353 VIGWVGFNIFGSLQAQLNQMDAKNKR 430
V+GWV +NI Q+ M KN +
Sbjct: 252 VLGWVAYNILKPGLNQIEDMQKKNAK 277
Score = 85.9 bits (211), Expect = 1e-15
Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Frame = +2
Query: 14 AAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLN 193
AA+ + A +L Q++ AS ++ +A D+R I +L P IGWV +NI Q N
Sbjct: 64 AALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFN 123
Query: 194 QMDAKN---KRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGW 364
M KN K+ +P +G+ AAA + A+A+TE+ A D R+ I VPV+GW
Sbjct: 124 SMQEKNARGKKGIPLGLGLSAAALAGMPEQADAATELMQTAGLDARILIFGA-FVPVLGW 182
Query: 365 VGFNIFGSLQAQLNQMDAKN--KRAVPAAV 448
V +NI Q+ M KN KR V A V
Sbjct: 183 VAYNILKPGLNQIEDMQKKNAKKRGVAAGV 212
[10][TOP]
>UniRef100_C5YMH8 Putative uncharacterized protein Sb07g002060 n=1 Tax=Sorghum
bicolor RepID=C5YMH8_SORBI
Length = 203
Score = 81.3 bits (199), Expect = 3e-14
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Frame = +2
Query: 11 PAAVGMGAAASLLFAQSAEASTEIATLAA-----SDNRVAILATLLVPVIGWVGFNIFGS 175
PAA A A F+ A + +A +AA SDNR +L ++ P IGWV +NI
Sbjct: 55 PAAAAAAALAGAFFSALASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNI--- 111
Query: 176 LQAQLNQMDAKNKRAVPAAVGMGAAASLL-FAQSAEAST-----EIATLAAS----DNRV 325
LQ LNQ++ +AV A +G+GAAA+ A EAS ++A LAA+ D+R
Sbjct: 112 LQPALNQLNRMRSQAVVAGLGLGAAATAAGMASPPEASAAASVQDLAALAAAAPADDSRG 171
Query: 326 AILATLLVPVIGWVGFNIFGSLQAQLNQM 412
+L ++ P IGWV FNI QLN+M
Sbjct: 172 LLLLIVVAPAIGWVLFNILQPALNQLNRM 200
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = +2
Query: 224 PAAVGMGAAASLLFAQSAEASTEIATLAA-----SDNRVAILATLLVPVIGWVGFNIFGS 388
PAA A A F+ A + +A +AA SDNR +L ++ P IGWV +NI
Sbjct: 55 PAAAAAAALAGAFFSALASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNI--- 111
Query: 389 LQAQLNQMDAKNKRAVPAAVGMGA 460
LQ LNQ++ +AV A +G+GA
Sbjct: 112 LQPALNQLNRMRSQAVVAGLGLGA 135
[11][TOP]
>UniRef100_A9NZQ0 Putative uncharacterized protein n=2 Tax=Picea sitchensis
RepID=A9NZQ0_PICSI
Length = 207
Score = 81.3 bits (199), Expect = 3e-14
Identities = 57/142 (40%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Frame = +2
Query: 14 AAVGMGAA--ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQ 187
AA MGAA +L SA A+ E+ LAASD+R +L LVP I WV +NI LQ
Sbjct: 65 AATAMGAALIGALSSCDSAAAAQEVMELAASDSRGTLLLLPLVPAIAWVLYNI---LQPA 121
Query: 188 LNQMDAKNKRAVPAAVGMGAAASLLF---AQSAEASTEIATLAA----SDNRVAILATLL 346
LNQ++ + A G+GAA F + A A + LAA +DNR +L ++
Sbjct: 122 LNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVV 181
Query: 347 VPVIGWVGFNIFGSLQAQLNQM 412
+P IGWV FNI Q+N+M
Sbjct: 182 IPAIGWVLFNILQPALNQINKM 203
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/93 (36%), Positives = 49/93 (52%)
Frame = +2
Query: 182 AQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIG 361
A+L Q+ + + A+G +L SA A+ E+ LAASD+R +L LVP I
Sbjct: 52 AKLGQVTKQWQAEAATAMGAALIGALSSCDSAAAAQEVMELAASDSRGTLLLLPLVPAIA 111
Query: 362 WVGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGA 460
WV +NI LQ LNQ++ + A G+GA
Sbjct: 112 WVLYNI---LQPALNQINRMKGAGLVAFAGLGA 141
[12][TOP]
>UniRef100_A9NQA0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NQA0_PICSI
Length = 206
Score = 81.3 bits (199), Expect = 3e-14
Identities = 57/142 (40%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Frame = +2
Query: 14 AAVGMGAA--ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQ 187
AA MGAA +L SA A+ E+ LAASD+R +L LVP I WV +NI LQ
Sbjct: 65 AATAMGAALIGALSSCDSAAAAQEVMELAASDSRGTLLLLPLVPAIAWVLYNI---LQPA 121
Query: 188 LNQMDAKNKRAVPAAVGMGAAASLLF---AQSAEASTEIATLAA----SDNRVAILATLL 346
LNQ++ + A G+GAA F + A A + LAA +DNR +L ++
Sbjct: 122 LNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVV 181
Query: 347 VPVIGWVGFNIFGSLQAQLNQM 412
+P IGWV FNI Q+N+M
Sbjct: 182 IPAIGWVLFNILQPALNQINKM 203
[13][TOP]
>UniRef100_C0PPX7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PPX7_PICSI
Length = 206
Score = 79.7 bits (195), Expect = 9e-14
Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Frame = +2
Query: 14 AAVGMGAA--ASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQ 187
AA MGAA +L S A+ E+ LAASD+R +L LVP I WV +NI LQ
Sbjct: 65 AATAMGAALIGALSSCDSTAAAQEVMELAASDSRGTLLLLPLVPAIAWVLYNI---LQPA 121
Query: 188 LNQMDAKNKRAVPAAVGMGAAASLLF---AQSAEASTEIATLAA----SDNRVAILATLL 346
LNQ++ + A G+GAA F + A A + LAA +DNR +L ++
Sbjct: 122 LNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRRLLLLIVV 181
Query: 347 VPVIGWVGFNIFGSLQAQLNQM 412
+P IGWV FNI Q+N+M
Sbjct: 182 IPAIGWVLFNILQPALNQINKM 203
[14][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 78.6 bits (192), Expect = 2e-13
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 17/153 (11%)
Frame = +2
Query: 5 AVPAAVGMGAAASLLFAQSAEASTEIATLAA-----SDNRVAILATLLVPVIGWVGFNIF 169
+V +A+ ++L + +A A+ +A +AA SDNR +L ++ P IGWV +NI
Sbjct: 44 SVSSALAGAFFSALASSDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNI- 102
Query: 170 GSLQAQLNQMDAKNKRAVPAAVGMGAAASLLFA----QSAEASTEIATLAAS-------- 313
LQ LNQ++ +AV A +G+GAAA+ + A +A A+ ++A LAA+
Sbjct: 103 --LQPALNQLNRMRSQAVVAGLGLGAAAAGMAAAPEASAAAAAQDLAALAAAAAAAAPAD 160
Query: 314 DNRVAILATLLVPVIGWVGFNIFGSLQAQLNQM 412
DNR +L ++ P IGWV FNI Q+N+M
Sbjct: 161 DNRGLLLLIVVTPAIGWVLFNILQPALNQINRM 193
[15][TOP]
>UniRef100_C6TLH3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TLH3_SOYBN
Length = 187
Score = 77.4 bits (189), Expect = 5e-13
Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 11 PAAVGMGAAASLL-FAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQ 187
PA GA + L +A A +IA +A DNR L ++P IGWV FNI Q
Sbjct: 52 PATAIAGAIFTTLGTCDAAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQ 111
Query: 188 LNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWV 367
LN+M ++ + V +G+G A L A A A+ A AASDNR +L ++ P I WV
Sbjct: 112 LNRM--RSTKGVIIGLGLGGLAGLAAAPHAWAAASEAAAAASDNRGQLLLFVVTPAIAWV 169
Query: 368 GFNIFGSLQAQLNQM 412
+NI QLN+M
Sbjct: 170 LYNILQPALNQLNRM 184
[16][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 73.6 bits (179), Expect = 7e-12
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 16/152 (10%)
Frame = +2
Query: 5 AVPAAVGMGAAASL----LFAQSAEASTEIATLAASD----NRVAILATLLVPVIGWVGF 160
A AA+ + A+++L L A ++ +A +AA+D +R +L ++ P IGWV +
Sbjct: 39 AKKAALSVSASSTLAGAFLAALASSPDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLY 98
Query: 161 NIFGSLQAQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI--------ATLAASD 316
NI QLN+M ++ +AV A +G+GAAA+ A EAS + A A D
Sbjct: 99 NILQPALNQLNRM--RSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPADD 156
Query: 317 NRVAILATLLVPVIGWVGFNIFGSLQAQLNQM 412
+R +L ++ P IGWV FNI QLN+M
Sbjct: 157 SRGLLLLIVVAPAIGWVLFNILQPALNQLNRM 188
[17][TOP]
>UniRef100_C6SZ97 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SZ97_SOYBN
Length = 192
Score = 72.8 bits (177), Expect = 1e-11
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +2
Query: 59 SAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 238
+A A +IA +A DNR L ++P IGWV FNI QLN+M ++ + V +G
Sbjct: 69 AAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRM--RSTKGVIIGLG 126
Query: 239 MGAAASLLFA--QSAEASTEIATL---AASDNRVAILATLLVPVIGWVGFNIFGSLQAQL 403
+G A L+ A SA A++E+A + A++DNR +L ++ P I WV +NI QL
Sbjct: 127 LGGLAGLVAAPHASAAAASEVAAMAEAASNDNRGQLLLFVVTPAIAWVLYNILQPALNQL 186
Query: 404 NQM 412
N+M
Sbjct: 187 NRM 189
[18][TOP]
>UniRef100_B6SR26 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SR26_MAIZE
Length = 176
Score = 72.4 bits (176), Expect = 1e-11
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Frame = +2
Query: 32 AAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKN 211
AA S +A A A A D+R +L ++ P IGWV +NI QLN+M ++
Sbjct: 42 AAVSASSPDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RS 99
Query: 212 KRAVPAAVGMGAAASLLFA---QSAEASTEIATLAAS----DNRVAILATLLVPVIGWVG 370
+AV A +G+GAAA+ + A SA ++A +AA+ D+R +L ++ P IGWV
Sbjct: 100 SQAVAAGLGLGAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVL 159
Query: 371 FNIFGSLQAQLNQM 412
FNI QLN+M
Sbjct: 160 FNILQPALNQLNRM 173
[19][TOP]
>UniRef100_Q0J8C7 Os08g0119800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0J8C7_ORYSJ
Length = 216
Score = 70.9 bits (172), Expect = 4e-11
Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Frame = +2
Query: 14 AAVGMGAA--ASLLFAQSAEASTEIATLAAS-----DNRVAILATLLVPVIGWVGFNIFG 172
AA M A ++L +A A+ +IA +AA+ DNR L + P I WV +NI
Sbjct: 67 AAAAMAGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQ 126
Query: 173 SLQAQLNQMDAKNKRAVPAAVGMGAA--ASLLFAQSAEASTEIATLAA-------SDNRV 325
QLN+M ++++ + A +G+GAA A L F A A+ E+A LAA DNR
Sbjct: 127 PALNQLNRM--RSEQVLVAGLGLGAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRG 184
Query: 326 AILATLLVPVIGWVGFNIFGSLQAQLNQM 412
+L ++ P I WV +NI QLN+M
Sbjct: 185 LLLLFVVAPAIAWVLYNILQPALNQLNRM 213
[20][TOP]
>UniRef100_A9PIV1 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PIV1_9ROSI
Length = 196
Score = 70.9 bits (172), Expect = 4e-11
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L + A A+ +IA +A DNR L L+P I WV FNI Q+N+
Sbjct: 61 AIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINR 120
Query: 197 MDAKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGWV 367
M + + V +G+G A+ F + +AS +EIA + AASDNR +L ++ P I WV
Sbjct: 121 M--RQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVVAPAILWV 178
Query: 368 GFNIFGSLQAQLNQM 412
+NI Q+N+M
Sbjct: 179 LYNILQPALNQINKM 193
[21][TOP]
>UniRef100_Q6ZJ41 cDNA clone:001-024-H10, full insert sequence n=2 Tax=Oryza sativa
RepID=Q6ZJ41_ORYSJ
Length = 205
Score = 70.9 bits (172), Expect = 4e-11
Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Frame = +2
Query: 14 AAVGMGAA--ASLLFAQSAEASTEIATLAAS-----DNRVAILATLLVPVIGWVGFNIFG 172
AA M A ++L +A A+ +IA +AA+ DNR L + P I WV +NI
Sbjct: 56 AAAAMAGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQ 115
Query: 173 SLQAQLNQMDAKNKRAVPAAVGMGAA--ASLLFAQSAEASTEIATLAA-------SDNRV 325
QLN+M ++++ + A +G+GAA A L F A A+ E+A LAA DNR
Sbjct: 116 PALNQLNRM--RSEQVLVAGLGLGAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRG 173
Query: 326 AILATLLVPVIGWVGFNIFGSLQAQLNQM 412
+L ++ P I WV +NI QLN+M
Sbjct: 174 LLLLFVVAPAIAWVLYNILQPALNQLNRM 202
[22][TOP]
>UniRef100_UPI00019828B8 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019828B8
Length = 201
Score = 70.1 bits (170), Expect = 7e-11
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ ++L A A+ +IA +A DNR L ++P I WV FNI QLN+
Sbjct: 65 AIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNK 124
Query: 197 MDAKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL---AASDNRVAILATLLVPVIGW 364
M ++ + V +G+G A+ F + AS +EIATL A+SDNR +L ++ P I W
Sbjct: 125 M--RSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPAILW 182
Query: 365 VGFNIFGSLQAQLNQM 412
V +NI QLN+M
Sbjct: 183 VLYNILQPALNQLNRM 198
[23][TOP]
>UniRef100_B9RMR5 Photosystem II core complex proteins psbY, chloroplast n=1
Tax=Ricinus communis RepID=B9RMR5_RICCO
Length = 195
Score = 69.3 bits (168), Expect = 1e-10
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ ++L A A+ +IA +A DNR L ++P +GWV FNI Q+N+
Sbjct: 58 AIAGAIFSTLSSCDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQINR 117
Query: 197 MDAKNKRAVPAAVGMGAAASLLF---AQSAEASTEIATL--AASDNRVAILATLLVPVIG 361
M + + V +G+G A+ F A A AS IA + AASDNR +L ++ P I
Sbjct: 118 M--RETKGVIIGLGLGGLAATGFMAAAPEASASENIAMIADAASDNRGQLLLFVVAPAIL 175
Query: 362 WVGFNIFGSLQAQLNQM 412
WV +NI Q+N+M
Sbjct: 176 WVLYNILQPALNQINRM 192
[24][TOP]
>UniRef100_B7FLH1 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FLH1_MEDTR
Length = 202
Score = 69.3 bits (168), Expect = 1e-10
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 ASLLFAQSAEASTEIATLA--ASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKN 211
++L +A A+ +IA +A +SDNR L L+P I WV +NIF Q+N+M +N
Sbjct: 71 STLSTCDAAFAAQQIAEIAEGSSDNRGLALLLPLIPAIAWVLYNIFQPALNQINRM--RN 128
Query: 212 KRAVPAAVGMG---AAASLLFAQSAEAS--TEIATLAASDNRVAILATLLVPVIGWVGFN 376
+ V +G+G AA+ + Q A AS T IA A SDNR +L ++ P I WV +N
Sbjct: 129 DKGVIIGLGLGGGLAASGFVSTQDAIASEMTAIAEAAGSDNRGQLLLFVVTPAILWVLYN 188
Query: 377 IFGSLQAQLNQM 412
I Q+N+M
Sbjct: 189 ILQPAFNQINRM 200
[25][TOP]
>UniRef100_A9PJJ8 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJJ8_9ROSI
Length = 196
Score = 69.3 bits (168), Expect = 1e-10
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L + A A+ +IA +A DNR L L+P I WV FNI Q+N+
Sbjct: 61 AIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINR 120
Query: 197 MDAKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGWV 367
M + + V +G+G A+ F + +AS +EIA + A SDNR +L ++ P I WV
Sbjct: 121 M--RQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVVAPAILWV 178
Query: 368 GFNIFGSLQAQLNQM 412
+NI Q+N+M
Sbjct: 179 LYNILQPALNQINKM 193
[26][TOP]
>UniRef100_P80470 Photosystem II protein psbY-2, chloroplastic n=1 Tax=Spinacia
oleracea RepID=PSBY_SPIOL
Length = 199
Score = 68.9 bits (167), Expect = 2e-10
Identities = 54/142 (38%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAA----SDNRVAILATLLVPVIGWVGFNIFGSLQA 184
A+ A+L A A ++A +AA SDNR L ++P +GWV FNI LQ
Sbjct: 60 AIAGAVFATLGSVDPAFAVQQLADIAAEAGTSDNRGLALLLPIIPALGWVLFNI---LQP 116
Query: 185 QLNQMDAKNKRAVPAAVGMG----AAASLLFA--QSAEASTEIATLAASDNRVAILATLL 346
LNQ++ VG+G A + LL A ++ AS EIA SDNR +L ++
Sbjct: 117 ALNQINKMRNEKKAFIVGLGLSGLATSGLLLATPEAQAASEEIA--RGSDNRGTLLLLVV 174
Query: 347 VPVIGWVGFNIFGSLQAQLNQM 412
+P IGWV FNI QLN+M
Sbjct: 175 LPAIGWVLFNILQPALNQLNKM 196
[27][TOP]
>UniRef100_B9HTF3 Putative uncharacterized protein n=2 Tax=Populus RepID=B9HTF3_POPTR
Length = 196
Score = 68.6 bits (166), Expect = 2e-10
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L + A A+ +IA +A DNR L L+P I WV FNI Q+N+
Sbjct: 61 AIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQINR 120
Query: 197 MDAKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGWV 367
M + + V +G+G A+ F + AS +EIA + A SDNR +L ++ P I WV
Sbjct: 121 M--RQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAILWV 178
Query: 368 GFNIFGSLQAQLNQM 412
+NI Q+N+M
Sbjct: 179 LYNILQPALNQINKM 193
[28][TOP]
>UniRef100_A9PJP1 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJP1_9ROSI
Length = 192
Score = 68.2 bits (165), Expect = 3e-10
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L ++ A A+ +IA +A DNR L L+P I WV FNI LQ LNQ
Sbjct: 58 AIAGAIFTALSSSEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNI---LQPTLNQ 114
Query: 197 MD-AKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGW 364
++ + R V +G+G A+ F + +AS +EIA + A SD+R +L ++ P I W
Sbjct: 115 VNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILW 174
Query: 365 VGFNIFGSLQAQLNQM 412
V +NI Q+N+M
Sbjct: 175 VLYNILQPALNQINRM 190
[29][TOP]
>UniRef100_B9HLC6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HLC6_POPTR
Length = 192
Score = 67.8 bits (164), Expect = 4e-10
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L + A A+ +IA +A DNR L L+P I WV FNI LQ LNQ
Sbjct: 58 AIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNI---LQPALNQ 114
Query: 197 MD-AKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGW 364
++ + R V +G+G A+ F + +AS +EIA + A SD+R +L ++ P I W
Sbjct: 115 VNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILW 174
Query: 365 VGFNIFGSLQAQLNQM 412
V +NI Q+N+M
Sbjct: 175 VLYNILQPALNQINRM 190
[30][TOP]
>UniRef100_A9PJP0 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJP0_9ROSI
Length = 192
Score = 67.8 bits (164), Expect = 4e-10
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = +2
Query: 17 AVGMGAAASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQ 196
A+ +L + A A+ +IA +A DNR L L+P I WV FNI LQ LNQ
Sbjct: 58 AIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNI---LQPALNQ 114
Query: 197 MD-AKNKRAVPAAVGMGAAASLLFAQSAEAS-TEIATL--AASDNRVAILATLLVPVIGW 364
++ + R V +G+G A+ F + +AS +EIA + A SD+R +L ++ P I W
Sbjct: 115 VNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIARIAEATSDSRGTLLLLVVAPAILW 174
Query: 365 VGFNIFGSLQAQLNQM 412
V +NI Q+N+M
Sbjct: 175 VLYNILQPALNQINRM 190
[31][TOP]
>UniRef100_O49347 Photosystem II protein psbY-2, chloroplastic n=3 Tax=Arabidopsis
thaliana RepID=PSBY_ARATH
Length = 189
Score = 65.9 bits (159), Expect = 1e-09
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Frame = +2
Query: 5 AVPAAVGMGAA-ASLLFAQSAEASTEIATLAA----SDNRVAILATLLVPVIGWVGFNIF 169
AV + GA +SL +++ A A +IA LAA SDNR L +VP I WV +NI
Sbjct: 44 AVTSTALAGAVFSSLSYSEPALAIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNIL 103
Query: 170 GSLQAQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEA-STEIATLAASDNRVAILATLL 346
Q+N+M V +G G AAS L EA + A A+SD+R +L ++
Sbjct: 104 QPAINQVNKMRESKGIVVGLGIGGGLAASGLLTPPPEAYAAAEAAAASSDSRGQLLLIVV 163
Query: 347 VPVIGWVGFNIFGSLQAQLNQM 412
P + WV +NI Q+N+M
Sbjct: 164 TPALLWVLYNILQPALNQINKM 185
[32][TOP]
>UniRef100_O62185 Protein F28D9.1, partially confirmed by transcript evidence n=1
Tax=Caenorhabditis elegans RepID=O62185_CAEEL
Length = 601
Score = 57.8 bits (138), Expect = 4e-07
Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Frame = -3
Query: 455 PCRRRRAQRACSWRPSGSAAPAESRRC*SQPNR*RAPAESPEWPRGCRWRPGWQSQSTPQ 276
P RRRR+ PS S +P RR S P++ R+PA E P R R S+S P
Sbjct: 372 PARRRRS-------PSASKSPPAPRRRRS-PSKSRSPAPKREIPPARRRRSPSASKSPPA 423
Query: 275 PTGRTAERQRRPCRRRRAQRACSWRPSGSAAPAESRRC*SQPSR*RAPAESPEWPRGCRW 96
P + + P RRR PS S +PA RR R+P++SP+ PR R
Sbjct: 424 PKRAKSRSKSPPAPRRRRS------PSQSKSPAPRRR--------RSPSKSPQAPRRRRS 469
Query: 95 RPGWQSQS-------TPQPTGRTAERQRRPCRRRRA 9
G +S+S P R + ++RR RRRR+
Sbjct: 470 PSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRS 505
Score = 55.5 bits (132), Expect = 2e-06
Identities = 51/151 (33%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = -3
Query: 449 RRRRAQRACSWRPSGSAAPAESRRC*SQ-----PNR*RAPAESPEWPRGCRWRPGWQSQS 285
RRRR+ A S S PA RR SQ P R ++ ++SP P R P
Sbjct: 303 RRRRSPSA-----SKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSP 357
Query: 284 TPQPTGRTAERQRRPCRRRRAQRACSWRPSGSAAPAESRRC*SQPSR*RAPAESPEWPRG 105
P P + + P RRRR+ PS S +P RR S PS+ R+PA E P
Sbjct: 358 PPAPKRAKSRSKSPPARRRRS-------PSASKSPPAPRRRRS-PSKSRSPAPKREIPPA 409
Query: 104 CRWRPGWQSQSTPQPTGRTAERQRRPCRRRR 12
R R S+S P P + + P RRR
Sbjct: 410 RRRRSPSASKSPPAPKRAKSRSKSPPAPRRR 440
[33][TOP]
>UniRef100_UPI00018691A7 hypothetical protein BRAFLDRAFT_241872 n=1 Tax=Branchiostoma
floridae RepID=UPI00018691A7
Length = 172
Score = 54.3 bits (129), Expect = 4e-06
Identities = 51/152 (33%), Positives = 62/152 (40%)
Frame = -3
Query: 458 RPCRRRRAQRACSWRPSGSAAPAESRRC*SQPNR*RAPAESPEWPRGCRWRPGWQSQSTP 279
RP R QR + RP G + P +P R P P R RP QS+ T
Sbjct: 10 RPTLRPPGQRRLTLRPPGQSRPT------LRPLGQRRPTLRPPGQRRPTLRPLGQSRPTL 63
Query: 278 QPTGRTAERQRRPCRRRRAQRACSWRPSGSAAPAESRRC*SQPSR*RAPAESPEWPRGCR 99
+P G QRRP R QR + RP G + P +P R P P+ R
Sbjct: 64 RPQG-----QRRPTLRPPGQRRPTLRPQGQSRPT------LRPQGQRRPTLRPQGQRRPT 112
Query: 98 WRPGWQSQSTPQPTGRTAERQRRPCRRRRAQR 3
RP QS+ T +P G QRRP R QR
Sbjct: 113 LRPLGQSRPTLRPQG-----QRRPTLRPPGQR 139
[34][TOP]
>UniRef100_Q7XWP6 OSJNBa0072D08.4 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XWP6_ORYSJ
Length = 808
Score = 53.5 bits (127), Expect = 7e-06
Identities = 55/189 (29%), Positives = 66/189 (34%), Gaps = 42/189 (22%)
Frame = +3
Query: 9 CPPPSAWAPLPLCCSPSRLRRRLRLPP--WPPATTAWPFWRLCWCPSSAG---------- 152
CP W +P RL W WP R CW P+S+
Sbjct: 437 CPRLHGWPIMPPLLGAYVFTDRLAFAAADWCFRLHGWPLCRRCWAPTSSPTGSPSPPPTG 496
Query: 153 -LASTSSALCRRS*TRWTPRTSAL---CPPPSAWAPLPLCCSPSRLRRRLRLPPWPP--- 311
LA T+ LCRR W P +S PPP+ L C+ L RR P P
Sbjct: 497 VLACTAGLLCRRC---WAPTSSPTGLPSPPPTG----VLACTAGLLCRRCWAPTSSPTGS 549
Query: 312 ---------ATTAWPFWRLCWCPSSVG-----------LASTSSALCRRS*TRWTPRTSA 431
A TA R CW P+S LA T+ LCRR W P +S
Sbjct: 550 PSSPPTGVLACTAGLLCRRCWAPTSSPTGSPSPPPTGVLACTAGLLCRRC---WAPTSSP 606
Query: 432 L---CPPPS 449
PPP+
Sbjct: 607 TGLPSPPPT 615