AV626486 ( LCL010a05_r )

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[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8I9W8_CHLRE
          Length = 270

 Score =  291 bits (745), Expect = 2e-77
 Identities = 144/144 (100%), Positives = 144/144 (100%)
 Frame = +3

Query: 78  MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLA 257
           MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLA
Sbjct: 1   MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLA 60

Query: 258 VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 437
           VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP
Sbjct: 61  VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 120

Query: 438 PPMGTPYGLRPADSLQHVYPLMTT 509
           PPMGTPYGLRPADSLQHVYPLMTT
Sbjct: 121 PPMGTPYGLRPADSLQHVYPLMTT 144

[2][TOP]
>UniRef100_A8JED3 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JED3_CHLRE
          Length = 206

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 51/108 (47%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
 Frame = +3

Query: 135 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 314
           G+ G+T+KALQT+TGA IQIDQ                      + DI+RG+FKGFALLR
Sbjct: 35  GRDGDTIKALQTFTGALIQIDQ----------------------VHDIVRGTFKGFALLR 72

Query: 315 QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLY----DDRTAPPPM 446
           QAT  +N     P     +PVYAPGYGL+P SQLY    D  +A  PM
Sbjct: 73  QATGHSNRG---PQPLSNKPVYAPGYGLVPPSQLYGGTGDIASAQVPM 117

[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
          Length = 1640

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
 Frame = +3

Query: 87   QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSV-DPTRVSISGAAYSVNLAVS 263
            ++ ++ECP++MVGRVIGK GET+K LQ ++GA +Q+DQ+V DP  V I+GA  SV  A  
Sbjct: 1453 ESRIVECPKNMVGRVIGKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAE 1512

Query: 264  IITDIIRGSFKGFALLRQ-------------ATRPANGRNGYP-AFTEPRPVYAPGYGLI 401
             +  II G       + Q             A     G  GYP A       Y PGYG  
Sbjct: 1513 AVAAIIAGGPTAQYAVPQAGAGYGGGYGGYGAIGGYGGYGGYPQAAAAAYAGYYPGYGAY 1572

Query: 402  P 404
            P
Sbjct: 1573 P 1573

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = +3

Query: 99   MECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSV--DPTRVSISGAAYSVNLAVSIIT 272
            ++CP +MVGRVIGK GET+K +   +GA I ++QS+  D  +V I+GAA  V +A +++T
Sbjct: 1372 IDCPATMVGRVIGKGGETIKGMMAQSGAHIAMNQSLEGDVKKVVITGAAPCVAVAEALVT 1431

Query: 273  DII 281
             ++
Sbjct: 1432 RLL 1434

[4][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8T9_9CHLO
          Length = 156

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = +3

Query: 96  VMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITD 275
           ++ECP+ MVGRVIG+ GET+K LQ+ TGA IQIDQSV P  ++I+G  Y V+ A   + D
Sbjct: 95  IVECPKDMVGRVIGRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVD 154

Query: 276 II 281
           +I
Sbjct: 155 VI 156

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
 Frame = +3

Query: 99  MECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVD---PTRVSISGAAYSVNLAVSII 269
           ++CP  +VGRVIGK GET+K LQ  +GA I IDQ+     P ++SISG A  V++A  ++
Sbjct: 14  IDCPPGLVGRVIGKGGETIKGLQAQSGAHITIDQNYPDGAPRKISISGPAGCVDIASKLV 73

Query: 270 TDIIRG 287
            D+++G
Sbjct: 74  EDLLKG 79

[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
           Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
          Length = 511

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
 Frame = +3

Query: 96  VMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITD 275
           V+ECP++MVGR+IGK GET+K LQ    A+IQIDQS  P +V+I+G ++++  A   I D
Sbjct: 289 VLECPKTMVGRIIGKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIED 348

Query: 276 IIR--GSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPP--- 440
           +IR  G   G   +   +RP  G      +      Y  GYG   A   Y      P   
Sbjct: 349 LIRSTGPPPGGMGMGGGSRPPYGAPYGQQYPGGAGGYGGGYGGYGAPGGYGAPGGYPGYG 408

Query: 441 -----PMGTPYG 461
                P G PYG
Sbjct: 409 GYGGYPGGAPYG 420

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = +3

Query: 48  AGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVD---PTR 218
           A  AP   QK       +ECP+ +VGRVIG+ GET++ LQ  +GA I ++Q        +
Sbjct: 194 AAPAPGEAQK------TLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQ 247

Query: 219 VSISGAAYSVNLAVSIITDIIRG 287
           ++ISG+  +V+ A S++ ++I G
Sbjct: 248 ITISGSQDAVDRAASMVQELIGG 270

[6][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
          Length = 393

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 7/86 (8%)
 Frame = +3

Query: 54  NAPKSRQKMRTQNSV----MECPRSMVGRVIGKSGETVKALQTYTGATIQIDQS---VDP 212
           NA + R ++  +N +    +ECP+SMVGR+IG+ GET+K+LQ  +GA + IDQS    +P
Sbjct: 116 NAERERLELERENEIVTRSLECPQSMVGRIIGRGGETIKSLQATSGAHVAIDQSGADGEP 175

Query: 213 TRVSISGAAYSVNLAVSIITDIIRGS 290
            RV+ISG   SV+ A  ++ +++ G+
Sbjct: 176 KRVTISGTRKSVDAASELVENLLLGT 201

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +3

Query: 99  MECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDI 278
           +ECP+  VG++IG+ GET++ +Q  TGA +QIDQ+  P  V ++GA   V+    ++ +I
Sbjct: 218 IECPKERVGKIIGRGGETIRGIQAATGARLQIDQTRQPCVVMMAGAEACVDACTQVVNEI 277

Query: 279 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGY 392
           + G     A+  +  R   G  GY +     P  + G+
Sbjct: 278 LEGG--STAVFNEIARGGQG-FGYASSANAAPYASAGW 312

[7][TOP]
>UniRef100_A4S9R3 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S9R3_OSTLU
          Length = 249

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 33/99 (33%), Positives = 54/99 (54%)
 Frame = +3

Query: 99  MECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDI 278
           +ECP+  VG++IG+ GET++ +QT TGA +QIDQ+  P +V ++G+   V     ++ +I
Sbjct: 78  IECPKESVGKLIGRGGETIRGIQTATGARMQIDQTRQPCQVILAGSEACVEAGAQVVQEI 137

Query: 279 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYG 395
           I G     A+  +  R   G  G     +     A G+G
Sbjct: 138 IDGG--STAVFNEIARGGQGFGGQGFGGQGYGAQAAGWG 174

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = +3

Query: 117 MVGRVIGKSGETVKALQTYTGATIQIDQSV---DPTRVSISGAAYSVNLAVSIITDIIRG 287
           MVGR+IG+ GET+K LQ  +GA + IDQ+V   +P +++I+GAA  V++A  ++ +++ G
Sbjct: 1   MVGRIIGRGGETIKGLQASSGAHVAIDQNVGEGEPRKITIAGAAACVDVASELVENLLLG 60

Query: 288 SFKGFALL 311
           +  G  LL
Sbjct: 61  TGVGGGLL 68

[8][TOP]
>UniRef100_B7G561 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7G561_PHATR
          Length = 1234

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 29/87 (33%), Positives = 51/87 (58%)
 Frame = +3

Query: 21  TAKVSTQRFAGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQ 200
           T  V  Q +  +A ++       N ++ C +  V  +IG+ G T+K +Q  +GA + IDQ
Sbjct: 736 TTSVRVQTYGVHADRASDTTGKGNHILTCDKRFVPLLIGRRGWTIKNIQDSSGARVDIDQ 795

Query: 201 SVDPTRVSISGAAYSVNLAVSIITDII 281
           +V P R++ISGA   V++AV ++ D++
Sbjct: 796 NVAPPRITISGAEEQVSIAVEMVRDVL 822

[9][TOP]
>UniRef100_C1N3L0 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3L0_9CHLO
          Length = 204

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +3

Query: 126 RVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRG 287
           +VIG+ GET+K LQ  +GA +QIDQ+ DP +V +SG  Y V  A + + +I+ G
Sbjct: 5   KVIGRGGETIKGLQASSGARVQIDQTTDPCKVVVSGNPYCVEAAYAQVANIVAG 58

[10][TOP]
>UniRef100_C1N3L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3L1_9CHLO
          Length = 314

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +3

Query: 87  QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDP---TRVSISGAAYSVNLA 257
           + +++ CP S+VGRVIGK GET+K LQ  +GA +Q++Q         V ISG    V++A
Sbjct: 196 KTTIVPCPPSLVGRVIGKGGETIKGLQAQSGAHVQVNQDFPDGANREVIISGPGGCVDVA 255

Query: 258 VSIITDIIRG 287
             +I +++ G
Sbjct: 256 ERMIHELLSG 265