AV625846 ( LC098g09_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV625846  LC098g09_r
         (341 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fr...   211   2e-53
UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax...   210   4e-53
UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas ...    80   9e-14
UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas ...    69   1e-10
UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcom...    68   4e-10
UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitr...    67   6e-10
UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypepti...    65   2e-09
UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-...    62   3e-08
UniRef100_A9TFS8 Predicted protein (Fragment) n=1 Tax=Physcomitr...    59   1e-07
UniRef100_A9NZQ0 Putative uncharacterized protein n=2 Tax=Picea ...    58   3e-07
UniRef100_C5YMH8 Putative uncharacterized protein Sb07g002060 n=...    58   4e-07
UniRef100_A9NQA0 Putative uncharacterized protein n=1 Tax=Picea ...    57   5e-07
UniRef100_C0PPX7 Putative uncharacterized protein n=1 Tax=Picea ...    57   8e-07
UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 T...    57   8e-07
UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 T...    55   2e-06
graphical overview:
alignment
UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_C1E7Y4 UniRef100_C1E7Y4 UniRef100_C1E7Y4 UniRef100_C1E7Y4 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9U315 UniRef100_A9U315 UniRef100_A9U315 UniRef100_A9U315 UniRef100_A4S5C8 UniRef100_A4S5C8 UniRef100_A4S5C8 UniRef100_A4S5C8 UniRef100_A4S5C8 UniRef100_A4S5C8 UniRef100_Q00Y99 UniRef100_Q00Y99 UniRef100_Q00Y99 UniRef100_Q00Y99 UniRef100_A9TFS8 UniRef100_A9TFS8 UniRef100_A9TFS8 UniRef100_A9TFS8 UniRef100_A9NZQ0 UniRef100_A9NZQ0 UniRef100_C5YMH8 UniRef100_C5YMH8 UniRef100_A9NQA0 UniRef100_A9NQA0 UniRef100_C0PPX7 UniRef100_C0PPX7 UniRef100_B6SQV2 UniRef100_B6SQV2