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[1][TOP] >UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE Length = 185 Score = 302 bits (774), Expect = 8e-81 Identities = 153/169 (90%), Positives = 154/169 (91%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAP PAQANQMMV TP NNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPLSDEQI AQVDYIVANGWIPCLEFA SDKAY SNES IRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 WKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM FL Q Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQ 169 [2][TOP] >UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE Length = 185 Score = 300 bits (768), Expect = 4e-80 Identities = 151/169 (89%), Positives = 154/169 (91%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAP PAQANQMMV TP NNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPL+DEQI AQVDYIVANGWIPCLEFA +DKAY SNES IRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 WKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM FL Q Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQ 169 [3][TOP] >UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP8_CHLRE Length = 188 Score = 195 bits (495), Expect(2) = 6e-77 Identities = 100/110 (90%), Positives = 101/110 (91%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAP PAQANQMMV TP NNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 SYLPPLSDEQI AQVDYIVANGWIPCLEFA SDKAY SNES IRFGSVSC Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 110 Score = 116 bits (291), Expect(2) = 6e-77 Identities = 53/56 (94%), Positives = 54/56 (96%) Frame = +1 Query: 349 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLRHPQAGADHGLSGP 516 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLR P+AGADHGL GP Sbjct: 111 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLRQPEAGADHGLPGP 166 [4][TOP] >UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U90_VOLCA Length = 185 Score = 288 bits (738), Expect = 1e-76 Identities = 142/169 (84%), Positives = 151/169 (89%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AA++AKSSV+A VARPARSSVRP+A LKPAVKAAP PAQAN+MMV TP NNKMFETF Sbjct: 1 MAAIVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPL+DEQI AQVDYIVANGWIPCLEFA +DKAY SNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 WKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM FL Q Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQ 169 [5][TOP] >UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U92_VOLCA Length = 185 Score = 287 bits (735), Expect = 3e-76 Identities = 140/169 (82%), Positives = 150/169 (88%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AA++AKSSV+ AV RPARSSVRP+A LKPA+KAAP PAQAN+MMV TP NNKMFETF Sbjct: 1 MAAIVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPL+DEQI AQVDYIVANGWIPCLEFA +DKAY SNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 WKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM FL Q Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQ 169 [6][TOP] >UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U91_VOLCA Length = 185 Score = 284 bits (726), Expect = 3e-75 Identities = 140/169 (82%), Positives = 148/169 (87%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AAVIAKSSV+ AVARPARS VRP+A LKP+V+A P P QAN+MMV TP NNKMFETF Sbjct: 1 MAAVIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETF 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPLSDEQI AQVDYIVANGWIPCLEFA +DKAY SNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 WKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM FL Q Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQ 169 [7][TOP] >UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP5_CHLRE Length = 139 Score = 228 bits (581), Expect = 2e-58 Identities = 111/123 (90%), Positives = 111/123 (90%) Frame = +2 Query: 149 MVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFG 328 MV TP NNKMFETFSYLPPLSDEQI AQVDYIVANGWIPCLEFA SDKAY SNES IRFG Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60 Query: 329 SVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVF 508 SVSCLYYDNRYWTMWKLPMFGCRD MQVLREIV CTKAFPDAYVRLVAFD KQVQIM F Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGF 120 Query: 509 LGQ 517 L Q Sbjct: 121 LVQ 123 [8][TOP] >UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK1_DUNTE Length = 189 Score = 219 bits (559), Expect = 7e-56 Identities = 106/170 (62%), Positives = 134/170 (78%), Gaps = 1/170 (0%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPA-QANQMMVCTPFNNKMFET 187 +AA++AKS+ A +A+ +R++ + A+LKPAV+AAP+ PA +ANQMMV P NNK FET Sbjct: 1 MAALLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFET 60 Query: 188 FSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWT 367 FSYLPPL+ +QI QVDYIV NGW PCLEFA ++AY S++S +RFG+VS YYDNRYWT Sbjct: 61 FSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWT 120 Query: 368 MWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 MWKLPMFGC D QVL EI C++AFP++Y RLVAFD KQVQ++ FL Q Sbjct: 121 MWKLPMFGCTDPSQVLSEINKCSRAFPESYQRLVAFDNKKQVQVISFLVQ 170 [9][TOP] >UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE Length = 188 Score = 209 bits (531), Expect = 1e-52 Identities = 107/171 (62%), Positives = 131/171 (76%), Gaps = 2/171 (1%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGD-PA-QANQMMVCTPFNNKMFE 184 +A++IAKS+ A VA +R+S + A+LKPAV+A P+ PA +ANQMMV P NNK FE Sbjct: 1 MASLIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFE 58 Query: 185 TFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYW 364 TFSYLPPL+ +QI QVDYIV NGW PCLEFA +AY S++S +RFG+VS YYDNRYW Sbjct: 59 TFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYW 118 Query: 365 TMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 TMWKLPMFGC D QVL EI C++AFP++Y RLVAFD KQVQ++ FL Q Sbjct: 119 TMWKLPMFGCTDPSQVLSEINKCSRAFPNSYQRLVAFDNKKQVQVISFLVQ 169 [10][TOP] >UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF11_CHLPY Length = 184 Score = 199 bits (505), Expect = 1e-49 Identities = 101/167 (60%), Positives = 119/167 (71%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +A+ I+ S V A VA RS ++P AV + G+ + + MMV TP NNK FETF Sbjct: 1 MASTISASLVKAPVATTQRSVLKPAGKTFKAVTVS-NGNVQKTSAMMVWTPVNNKFFETF 59 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPLS +QI QVDYIV NGW PCLEFA D AY SN+S +RFG+VS Y DNRYWTM Sbjct: 60 SYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTM 119 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WKLPMFGC D QVL+EI +C +AFPDAY+RLVAFD +QVQI FL Sbjct: 120 WKLPMFGCTDPSQVLKEISNCERAFPDAYIRLVAFDAIRQVQITGFL 166 [11][TOP] >UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella salina RepID=Q5XR40_DUNSA Length = 190 Score = 197 bits (501), Expect = 4e-49 Identities = 107/173 (61%), Positives = 126/173 (72%), Gaps = 4/173 (2%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARP-ARSSVRPMAALKPAV-KAAPEGD-PA-QANQMMVCTPFNNKM 178 +AA+IAK+ AVA P +R S + A+LKPAV + AP+ PA + NQMMV P NNK Sbjct: 1 MAALIAKTC--PAVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ 58 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FETFSYLPPL+ +QI QVDYIV NGWIPCLEF+ AY +N + RFG VS YYDNR Sbjct: 59 FETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNR 118 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 YWTMWKLPMFGC D QVL EI C++AFP+AY RLVAFD KQVQ++ FL Q Sbjct: 119 YWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRLVAFDNKKQVQVISFLVQ 171 [12][TOP] >UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS5_ACECL Length = 184 Score = 196 bits (499), Expect = 6e-49 Identities = 100/167 (59%), Positives = 117/167 (70%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +AA + ++ + ARSS P A A+ ++ +MMV PFNNKMFETF Sbjct: 1 MAAAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVA-MKKSREMMVWQPFNNKMFETF 59 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ IR G V+ Y DNRYWTM Sbjct: 60 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 119 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI FL Sbjct: 120 WKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 166 [13][TOP] >UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF10_CHLPY Length = 181 Score = 195 bits (496), Expect = 1e-48 Identities = 94/163 (57%), Positives = 114/163 (69%), Gaps = 5/163 (3%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPA-----VKAAPEGDPAQANQMMVCTPFNNKMFETFSYLP 202 ++ +A A +VRP+A LK A + G + M V TP NNKMFETFSYLP Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60 Query: 203 PLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLP 382 PL+D +I QVDYIV NGW PCLEFA S AYASNE+ IR + +CLYYDNRYWTMWKLP Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120 Query: 383 MFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 MFGC D QVL+E+ +C +AFPDAY+R+V FD +QVQ+ FL Sbjct: 121 MFGCTDGHQVLQEVANCRRAFPDAYIRMVGFDPIRQVQVAGFL 163 [14][TOP] >UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS3_ACECL Length = 183 Score = 195 bits (495), Expect = 2e-48 Identities = 92/126 (73%), Positives = 100/126 (79%) Frame = +2 Query: 134 QANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNES 313 + MMV PFNNKMFETFSYLPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ Sbjct: 40 KCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 99 Query: 314 IIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQV 493 IR G VS Y DNRYWTMWKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QV Sbjct: 100 CIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 159 Query: 494 QIMVFL 511 QI FL Sbjct: 160 QISGFL 165 [15][TOP] >UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS4_ACECL Length = 182 Score = 194 bits (493), Expect = 3e-48 Identities = 91/123 (73%), Positives = 100/123 (81%) Frame = +2 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 +MMV PFNNKMFETFSYLPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ IR Sbjct: 42 EMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIR 101 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 G V+ Y DNRYWTMWKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI Sbjct: 102 MGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQIS 161 Query: 503 VFL 511 FL Sbjct: 162 GFL 164 [16][TOP] >UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS6_ACECL Length = 182 Score = 192 bits (489), Expect = 9e-48 Identities = 97/164 (59%), Positives = 111/164 (67%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 +I+ S +A P S + A+K +MMV PFNNKMFETFSYL Sbjct: 10 IISSKQCSKPIAPPKVSINKGFVNTSAAIKN---------REMMVWQPFNNKMFETFSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ I G V+ Y DNRYWTMWKL Sbjct: 61 PPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKL 120 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI FL Sbjct: 121 PMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFL 164 [17][TOP] >UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS7_ACECL Length = 183 Score = 191 bits (485), Expect = 3e-47 Identities = 89/122 (72%), Positives = 99/122 (81%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 MMV PFNNKMFETFSYLPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ IR Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G V+ Y DNRYWTMWKLPMFGC D QVL ++ CTKAFPDAY+RLV FD ++QVQI Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICG 163 Query: 506 FL 511 FL Sbjct: 164 FL 165 [18][TOP] >UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Acetabularia acetabulum RepID=RBS1_ACEAT Length = 182 Score = 191 bits (485), Expect = 3e-47 Identities = 89/123 (72%), Positives = 99/123 (80%) Frame = +2 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 +MMV PFNNKMFETFS+LPPL+DEQI QVDYI+ N W PCLEFAASD+AYA NE+ IR Sbjct: 42 EMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIR 101 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 G V+ Y DNRYWTMWKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI Sbjct: 102 MGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQIS 161 Query: 503 VFL 511 FL Sbjct: 162 GFL 164 [19][TOP] >UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS4_ACEAT Length = 182 Score = 191 bits (484), Expect = 3e-47 Identities = 89/123 (72%), Positives = 99/123 (80%) Frame = +2 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 +MMV PFNNKMFETFS+LPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ IR Sbjct: 42 EMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIR 101 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 G V+ Y DNRYWTMWKLPMFGC D QVL EI CT AFPDAY+RLV FD ++QVQI Sbjct: 102 MGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQIS 161 Query: 503 VFL 511 FL Sbjct: 162 GFL 164 [20][TOP] >UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS5_ACEAT Length = 183 Score = 190 bits (482), Expect = 6e-47 Identities = 89/122 (72%), Positives = 98/122 (80%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 MMV PFNNKMFETFS+LPPL+DEQI QVDYI+AN W PCLEFAASD+AYA NE+ IR Sbjct: 44 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G V+ Y DNRYWTMWKLPMFGC D QVL EI CT AFPDAY+RLV FD ++QVQI Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISG 163 Query: 506 FL 511 FL Sbjct: 164 FL 165 [21][TOP] >UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS3_ACEAT Length = 182 Score = 190 bits (482), Expect = 6e-47 Identities = 89/122 (72%), Positives = 98/122 (80%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 MMV PFNNKMFETFS+LPPL+DEQI QVDYI+ N W PCLEFAASD+AYA NE+ IR Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRM 102 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G V+ Y DNRYWTMWKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI Sbjct: 103 GPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISG 162 Query: 506 FL 511 FL Sbjct: 163 FL 164 [22][TOP] >UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Batophora oerstedii RepID=RBS_BATOE Length = 175 Score = 182 bits (462), Expect = 1e-44 Identities = 87/149 (58%), Positives = 106/149 (71%), Gaps = 2/149 (1%) Frame = +2 Query: 71 SVRPMAALKPAVKAA--PEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYI 244 ++ P A K V+ G +++ MMV PFNNK FETFSYLPPL+D+QI QVDYI Sbjct: 9 TIVPCATTKQIVRPRFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYI 68 Query: 245 VANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREI 424 + N W PCLEFA SD+AY ++++ +R G + Y DNRYWTMWKLPMFGC D QVL EI Sbjct: 69 LRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEI 128 Query: 425 VDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 CTKAFPDAY+RLV FD ++QVQI FL Sbjct: 129 SACTKAFPDAYIRLVCFDANRQVQISGFL 157 [23][TOP] >UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus pluvialis RepID=Q30CC3_HAEPL Length = 141 Score = 180 bits (456), Expect = 6e-44 Identities = 84/124 (67%), Positives = 96/124 (77%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 MMV P NNK +ETFSYLPPL+ +QI QVDY+V NGWIPCLEFA + +AY SN S +RF Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 GSVS YYDNRYWT+WKLPMFGC D VL EI +KAFP AY+R+VAFD +QVQIM Sbjct: 61 GSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEISRASKAFPQAYIRMVAFDNVRQVQIMS 120 Query: 506 FLGQ 517 FL Q Sbjct: 121 FLVQ 124 [24][TOP] >UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFT5_9CHLO Length = 158 Score = 172 bits (437), Expect = 9e-42 Identities = 84/137 (61%), Positives = 100/137 (72%) Frame = +2 Query: 107 KAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAAS 286 KA P P +A+ V P NNK +ETFSYLP L+ EQI QVDY++ NG+ PCLEFA + Sbjct: 13 KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADA 71 Query: 287 DKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRL 466 ++ SNE+ +RF VS YYDNRYWTMWKLPMFGC D QVL+E+ CT+AFP+AYVRL Sbjct: 72 AYSFVSNENTVRFSGVSANYYDNRYWTMWKLPMFGCTDAAQVLKEVALCTRAFPNAYVRL 131 Query: 467 VAFDIHKQVQIMVFLGQ 517 VAFD KQVQ M FL Q Sbjct: 132 VAFDNTKQVQCMGFLVQ 148 [25][TOP] >UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BL0_NANBA Length = 182 Score = 172 bits (435), Expect = 2e-41 Identities = 85/159 (53%), Positives = 101/159 (63%) Frame = +2 Query: 35 SVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSD 214 ++S A R A + A+ K G + M+V TP NNK FETFS+LPPLSD Sbjct: 6 AISTAAVRIAPITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSD 65 Query: 215 EQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGC 394 +I QVDYIV NGW PCLEF+ + AY + + +R S Y DNRYW+MWKLPMFGC Sbjct: 66 SEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGC 125 Query: 395 RDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D QVL+EI CTKAFP AY+RLVAFD KQVQ FL Sbjct: 126 TDGSQVLKEIAGCTKAFPGAYIRLVAFDNQKQVQCTGFL 164 [26][TOP] >UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO Length = 165 Score = 171 bits (433), Expect = 3e-41 Identities = 85/148 (57%), Positives = 101/148 (68%), Gaps = 1/148 (0%) Frame = +2 Query: 71 SVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVA 250 ++R A + A KA PA+ MV P NNK FETFSYLPPL+DEQI QVDYIV Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58 Query: 251 NGWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIV 427 NGW PCLEF+ S AY SN +++R + YYDNRYWT+WKLPMFGC D QVL+EI Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMFGCTDPSQVLKEIA 118 Query: 428 DCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 C KA PDAYVR+ AFD ++QVQ+ L Sbjct: 119 ACVKACPDAYVRMAAFDANRQVQVASML 146 [27][TOP] >UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK9_NANBA Length = 182 Score = 170 bits (431), Expect = 5e-41 Identities = 86/167 (51%), Positives = 105/167 (62%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETF 190 +A+ IA S+ + VA + + + K G + M+V TP NNK FETF Sbjct: 1 MASTIAFSTAAVRVAPITKVNA---TSTKARTAFVSNGTVKKTTAMLVWTPINNKFFETF 57 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 S+LPPLSD +I QVDYIV NGW PCLEF+ + AY + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WKLPMFGC D QVL+EI CTKAFP AY+RLVAFD KQVQ FL Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCTKAFPGAYIRLVAFDNQKQVQCTGFL 164 [28][TOP] >UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Chlamydomonas moewusii RepID=RBS_CHLMO Length = 168 Score = 169 bits (429), Expect = 8e-41 Identities = 88/156 (56%), Positives = 105/156 (67%) Frame = +2 Query: 50 VARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDA 229 +A A SV AA + +AAP PA A + V P NNK +ETFSYLPPL++++I Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56 Query: 230 QVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQ 409 QVDYI+ NGW PCLEFA ++ SN + +R VS YYDNRYWTMWKLPMFGC D Q Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQ 116 Query: 410 VLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 VLRE+ C AFP+ Y+RLVAFD KQVQ M FL Q Sbjct: 117 VLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQ 152 [29][TOP] >UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1 Tax=Acetabularia peniculus RepID=RBS1_ACECL Length = 126 Score = 168 bits (426), Expect = 2e-40 Identities = 78/108 (72%), Positives = 87/108 (80%) Frame = +2 Query: 188 FSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWT 367 FSYLPPL+DEQI QVDYI+AN W PCLEFAASD+AYA N++ IR G V+ Y DNRYWT Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60 Query: 368 MWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 MWKLPMFGC D QVL EI CTKAFPDAY+RLV FD ++QVQI FL Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 108 [30][TOP] >UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Parietochloris incisa RepID=B3VSA1_9CHLO Length = 189 Score = 167 bits (422), Expect = 5e-40 Identities = 85/168 (50%), Positives = 113/168 (67%), Gaps = 2/168 (1%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARS--SVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFET 187 A++++ A A PARS ++ P A A K G + QMMV P NN+ FET Sbjct: 6 ASLLSAPVAVVASAAPARSLKALAPARAATFAQKTVSNG--IKTRQMMVWQPTNNRYFET 63 Query: 188 FSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWT 367 S+LPPL+D+QI QVDY++ NGW+PCLEF+ ++ AY ++++ IR+G+V+ Y DNRYWT Sbjct: 64 LSFLPPLTDDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQDNRYWT 123 Query: 368 MWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 M+KLPMFGC D QVL EI + K FPDAY+RLVAFD Q Q+ FL Sbjct: 124 MFKLPMFGCTDPGQVLTEIANAEKCFPDAYIRLVAFDNVTQTQVAGFL 171 [31][TOP] >UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Euglena gracilis RepID=Q9STC5_EUGGR Length = 271 Score = 166 bits (421), Expect = 7e-40 Identities = 82/145 (56%), Positives = 98/145 (67%) Frame = +2 Query: 83 MAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWI 262 MA +KP V A M V P NNK FETFSYLPPLSD QI QVD I+A G Sbjct: 116 MAMMKPKVAAVLPF--TSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 263 PCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKA 442 PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI +C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 443 FPDAYVRLVAFDIHKQVQIMVFLGQ 517 +P YVRL AFD KQVQ++ F+ Q Sbjct: 234 YPQCYVRLAAFDSVKQVQVISFVVQ 258 [32][TOP] >UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1 Tax=Euglena gracilis RepID=RBS_EUGGR Length = 1273 Score = 166 bits (421), Expect = 7e-40 Identities = 82/145 (56%), Positives = 98/145 (67%) Frame = +2 Query: 83 MAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWI 262 MA +KP V A M V P NNK FETFSYLPPLSD QI QVD I+A G Sbjct: 116 MAMMKPKVAAVLPF--TSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 263 PCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKA 442 PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI +C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 443 FPDAYVRLVAFDIHKQVQIMVFLGQ 517 +P YVRL AFD KQVQ++ F+ Q Sbjct: 234 YPQCYVRLAAFDSVKQVQVISFVVQ 258 Score = 165 bits (418), Expect = 1e-39 Identities = 85/160 (53%), Positives = 104/160 (65%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDE 217 +S V RP+ SS AA G+ +M V P NNK FETFSYLPPLSD Sbjct: 1115 ISFVVQRPSGSSSSSWGM------AAMTGE----KEMKVWNPVNNKKFETFSYLPPLSDA 1164 Query: 218 QIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCR 397 QI QVD I+A G PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1224 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 D QVLREI +C +A+P YVRL AFD KQVQ++ F+ Q Sbjct: 1225 DASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQ 1264 Score = 164 bits (416), Expect = 3e-39 Identities = 85/160 (53%), Positives = 103/160 (64%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDE 217 +S V RP+ SS AA G+ M V P NNK FETFSYLPPLSD Sbjct: 253 ISFVVQRPSGSSSSSWGM------AAMTGE----KDMKVWNPVNNKKFETFSYLPPLSDA 302 Query: 218 QIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCR 397 QI QVD I+A G PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 362 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 D QVLREI +C +A+P YVRL AFD KQVQ++ F+ Q Sbjct: 363 DASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQ 402 Score = 164 bits (416), Expect = 3e-39 Identities = 85/160 (53%), Positives = 103/160 (64%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDE 217 +S V RP+ SS AA G+ M V P NNK FETFSYLPPLSD Sbjct: 540 ISFVVQRPSGSSSSSWGM------AAMTGE----KDMKVWNPVNNKKFETFSYLPPLSDA 589 Query: 218 QIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCR 397 QI QVD I+A G PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 649 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 D QVLREI +C +A+P YVRL AFD KQVQ++ F+ Q Sbjct: 650 DASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQ 689 Score = 164 bits (416), Expect = 3e-39 Identities = 85/160 (53%), Positives = 103/160 (64%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDE 217 +S V RP+ SS AA G+ M V P NNK FETFSYLPPLSD Sbjct: 971 ISFVVQRPSGSSSSSWGM------AAMTGE----KDMKVWNPVNNKKFETFSYLPPLSDA 1020 Query: 218 QIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCR 397 QI QVD I+A G PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1080 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 D QVLREI +C +A+P YVRL AFD KQVQ++ F+ Q Sbjct: 1081 DASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQ 1120 Score = 164 bits (414), Expect = 4e-39 Identities = 76/124 (61%), Positives = 91/124 (73%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P NNK FETFSYLPPLSD QI QVD I+A G PCLEFAA + ++ +N++ +RF Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 768 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + YYDNRYWTMWKLPMFGC D QVLREI +C +A+P YVRL AFD KQVQ++ Sbjct: 769 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 828 Query: 506 FLGQ 517 F+ Q Sbjct: 829 FVVQ 832 Score = 162 bits (409), Expect = 2e-38 Identities = 75/124 (60%), Positives = 90/124 (72%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P NNK FETFSYLPPLSD QI QVD I+A G PCLEFAA + ++ +N++ +RF Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 481 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + YYDN YWTMWKLPMFGC D QVLREI +C +A+P YVRL AFD KQVQ++ Sbjct: 482 SGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 541 Query: 506 FLGQ 517 F+ Q Sbjct: 542 FVVQ 545 Score = 161 bits (407), Expect = 3e-38 Identities = 85/160 (53%), Positives = 105/160 (65%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDE 217 +S V RP+ SS + AA G+ +M V P NNK FETFSYLPPLSD Sbjct: 827 ISFVVQRPSGSSSSSSWGM-----AAMTGE----KEMKVWNPVNNKKFETFSYLPPLSDA 877 Query: 218 QIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCR 397 QI QVD I+A G PCLEFAA + ++ +N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 937 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 D QVLREI +C +A+P YVRL AFD KQVQ++ F+ Q Sbjct: 938 DASQVLREISECRRAYPQCYVRL-AFDSVKQVQVISFVVQ 976 [33][TOP] >UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO Length = 140 Score = 166 bits (419), Expect = 1e-39 Identities = 77/122 (63%), Positives = 89/122 (72%) Frame = +2 Query: 152 VCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGS 331 V P NNK +ETFSYLP L+ EQI QVDY++ NGW PCLEFA ++ SNE+ +RF Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62 Query: 332 VSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYDNRYWTMWKLPMFGC D QVL+EI C AFP++Y RLVAFD +KQVQ M FL Sbjct: 63 ASSNYYDNRYWTMWKLPMFGCTDASQVLKEIAACNAAFPESYSRLVAFDNNKQVQCMGFL 122 Query: 512 GQ 517 Q Sbjct: 123 VQ 124 [34][TOP] >UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK3_NANBA Length = 180 Score = 164 bits (415), Expect = 3e-39 Identities = 83/155 (53%), Positives = 99/155 (63%) Frame = +2 Query: 47 AVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQID 226 A+ RP + V+ A K V A + MV TP NNK FETFS+LPPLS+ +I Sbjct: 10 ALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETFSFLPPLSESEIS 67 Query: 227 AQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHM 406 QVDY+V N + PCLEF+ + AY + S IR S Y DNRYW MWKLPMFGC D Sbjct: 68 KQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPMWKLPMFGCTDGS 127 Query: 407 QVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 QVL+EI CTKAFP AY+RLVAFD +QVQ+ FL Sbjct: 128 QVLKEIAACTKAFPGAYIRLVAFDASRQVQVAGFL 162 [35][TOP] >UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=Q33BU5_CHLPY Length = 124 Score = 160 bits (404), Expect = 6e-38 Identities = 72/106 (67%), Positives = 83/106 (78%) Frame = +2 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPL+D +I QVDYIV NGW PCLEFA S AYASNE+ IR + +CLYYDNRYWTMW Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QVL E+ +C +AFPDAY+RLV FD +QVQ+ FL Sbjct: 61 KLPMFGCTDGHQVLAEVSNCRRAFPDAYIRLVGFDPVRQVQVAGFL 106 [36][TOP] >UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=1 Tax=Acetabularia acetabulum RepID=Q8S322_ACEAT Length = 126 Score = 156 bits (395), Expect = 7e-37 Identities = 72/108 (66%), Positives = 83/108 (76%) Frame = +2 Query: 188 FSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWT 367 +S+LPPL+DEQI QVDYI+AN W CLEFAASD+AYA N++ IR V+ Y DNRYWT Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60 Query: 368 MWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 MWKLPMFGC D QVL EI CT AFPDAY+R V FD ++QVQI FL Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRFVCFDAYRQVQISGFL 108 [37][TOP] >UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E329_9CHLO Length = 191 Score = 152 bits (384), Expect = 1e-35 Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 4/147 (2%) Frame = +2 Query: 83 MAALKPAVKAAP---EGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVAN 253 ++A+ P + AP G A N MMV P NK FETFS+LPPLSD+++ QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 254 GWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVD 430 GW PC+EF ++ KAYA SV+ YYDNRYW MWKLPM+GC + +VL+EI Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123 Query: 431 CTKAFPDAYVRLVAFDIHKQVQIMVFL 511 CT AFPD ++R+ FD KQVQ FL Sbjct: 124 CTSAFPDCFIRVAGFDNIKQVQCSSFL 150 [38][TOP] >UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I5_9CHLO Length = 186 Score = 151 bits (382), Expect = 2e-35 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 1/151 (0%) Frame = +2 Query: 62 ARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDY 241 A SV P+ A PAV G ++++ M V P NNK FETFS+LPPLSD++I QV Y Sbjct: 3 ALCSVAPVVAKVPAVST---GKASKSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 242 IVANGWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLR 418 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 419 EIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 E+ CT+AFPD ++R+ FD KQVQ FL Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQVQCSSFL 150 [39][TOP] >UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I4_9CHLO Length = 183 Score = 151 bits (382), Expect = 2e-35 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 1/151 (0%) Frame = +2 Query: 62 ARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDY 241 A SV P+ A PAV G ++++ M V P NNK FETFS+LPPLSD++I QV Y Sbjct: 3 ALCSVAPVVAKVPAVST---GKASKSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 242 IVANGWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLR 418 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 419 EIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 E+ CT+AFPD ++R+ FD KQVQ FL Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQVQCSSFL 150 [40][TOP] >UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I3_9CHLO Length = 204 Score = 151 bits (382), Expect = 2e-35 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 1/151 (0%) Frame = +2 Query: 62 ARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDY 241 A SV P+ A PAV G ++++ M V P NNK FETFS+LPPLSD++I QV Y Sbjct: 3 ALCSVAPVVAKVPAVST---GKASKSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 242 IVANGWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLR 418 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 419 EIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 E+ CT+AFPD ++R+ FD KQVQ FL Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQVQCSSFL 150 [41][TOP] >UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E330_9CHLO Length = 179 Score = 150 bits (380), Expect = 4e-35 Identities = 73/147 (49%), Positives = 96/147 (65%), Gaps = 4/147 (2%) Frame = +2 Query: 83 MAALKPAVKAAP---EGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVAN 253 ++A+ P + AP G A N MMV P NK FETFS+LPPLSD+++ QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 254 GWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVD 430 GW PC+EF ++ KAYA SV+ YYDNRYW MWKLPM+GC + +VL+EI Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123 Query: 431 CTKAFPDAYVRLVAFDIHKQVQIMVFL 511 CT+AFP+ ++R+ FD KQVQ FL Sbjct: 124 CTQAFPECFIRVAGFDNIKQVQCSSFL 150 [42][TOP] >UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena gracilis RepID=Q7M229_EUGGR Length = 138 Score = 147 bits (371), Expect = 4e-34 Identities = 73/131 (55%), Positives = 91/131 (69%), Gaps = 7/131 (5%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAA---SDKAYA----S 304 M V P NNK +ETFSYLPPLSD +I QVD I+A GWIPCLEF+ S++AY + Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60 Query: 305 NESIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIH 484 N++ +RF + YYDNRYWTMWKLPMFGC D QVL+E+ A P+ +VRL AFD Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMFGCTDASQVLKELSPLEFAAPENFVRLAAFDSV 120 Query: 485 KQVQIMVFLGQ 517 KQVQ++ F+ Q Sbjct: 121 KQVQVISFVVQ 131 [43][TOP] >UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA22_OSTLU Length = 169 Score = 147 bits (371), Expect = 4e-34 Identities = 72/149 (48%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Frame = +2 Query: 68 SSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIV 247 S++ +A A G A A MM+ P NKMFETFS+LPPLSD +I QV Y++ Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61 Query: 248 ANGWIPCLEFAASDKAYASNESIIRFG-SVSCLYYDNRYWTMWKLPMFGCRDHMQVLREI 424 NGW PC+EF S AY S++ YYDNRYW MWKLPM+GC++ +V+ EI Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121 Query: 425 VDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 C K FPD YVR+ FD KQVQ FL Sbjct: 122 NTCIKCFPDCYVRVAGFDNIKQVQCSAFL 150 [44][TOP] >UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG4_OSTTA Length = 168 Score = 144 bits (364), Expect = 3e-33 Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Frame = +2 Query: 110 AAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASD 289 A G A A MM+ P NKMFETFS+LPPLSD +I Q Y++ NGW PC+EF ++ Sbjct: 15 AVSTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAE 74 Query: 290 KAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRL 466 AYA S++ LYYDNRYW MWKLPM+GC++ +VL E+ K FPD Y+R+ Sbjct: 75 HAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDCYIRV 134 Query: 467 VAFDIHKQVQIMVFL 511 V FD KQVQ FL Sbjct: 135 VGFDNIKQVQCAGFL 149 [45][TOP] >UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ3_9POAL Length = 169 Score = 140 bits (354), Expect = 4e-32 Identities = 69/164 (42%), Positives = 96/164 (58%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ A +P A + + M V + NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL++EQ+ QVDY++ N W+PCLEF+ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E+ + ++PDAYVR++ FD +Q Q + F+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIRQTQCVSFI 161 [46][TOP] >UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA Length = 214 Score = 139 bits (351), Expect = 9e-32 Identities = 78/175 (44%), Positives = 99/175 (56%), Gaps = 8/175 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPEGDPAQANQMMVCTPF 166 + A +A S+ V P+ SS V+ + LK A K + + ++ M V P Sbjct: 39 VVAPVALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPI 98 Query: 167 NNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLY 346 FETFSYLPPL+D+QI QVDY++ IPC+EF +N S G+ S Y Sbjct: 99 GQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGY 154 Query: 347 YDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YD RYWTMWKLPMFGC D QVLREI +C FP +VR++ FD KQVQI FL Sbjct: 155 YDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFL 209 [47][TOP] >UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TCL7_PHYPA Length = 184 Score = 139 bits (351), Expect = 9e-32 Identities = 81/177 (45%), Positives = 100/177 (56%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS----VRPMAALKPAVKAAPEGDPAQANQ-------MMVCT 160 +AV A S+ AA + A S+ V+ + LKPA + + A Q M V Sbjct: 7 SAVAAPVSLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWN 66 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P FETFSYLPPL+D+QI QVDY++ IPC+EF +N S G+ S Sbjct: 67 PIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSS 122 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVLREI +C FP +VR++ FD KQVQI FL Sbjct: 123 GYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFL 179 [48][TOP] >UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=Q75WT7_PHYPA Length = 184 Score = 139 bits (350), Expect = 1e-31 Identities = 79/174 (45%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 ++ +A SSV+A+ SSV+ + LK A + + Q M V P Sbjct: 13 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+QI QVDY++ IPC+EF +N S GS S YY Sbjct: 70 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 125 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC D QVLREI +C ++P +VR++ FD KQVQI FL Sbjct: 126 DGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFL 179 [49][TOP] >UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum bicolor RepID=C5Y519_SORBI Length = 169 Score = 139 bits (349), Expect = 1e-31 Identities = 69/164 (42%), Positives = 95/164 (57%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ A + A + + M V + NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL++EQ+ QVDY++ N W+PCLEF+ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E+ + ++PDAYVR++ FD KQ Q + F+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIKQTQCVSFI 161 [50][TOP] >UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKI7_PHYPA Length = 181 Score = 138 bits (348), Expect = 2e-31 Identities = 81/183 (44%), Positives = 104/183 (56%), Gaps = 16/183 (8%) Frame = +2 Query: 11 LAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ------ 145 +A+V+A S+V S+AV+ +SV+ + LK + + + + Q Sbjct: 1 MASVVATSTVVAPAAFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQ 60 Query: 146 -MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 M V P FETFSYLPPLSD+ I QVDY++ IPCLEF +D +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS--- 117 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 S YYD RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECKKTFPGCFVRVLGFDNVKQVQIC 173 Query: 503 VFL 511 FL Sbjct: 174 GFL 176 [51][TOP] >UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCN2_PHYPA Length = 182 Score = 138 bits (347), Expect = 3e-31 Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 16/183 (8%) Frame = +2 Query: 11 LAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ------ 145 +A+V+A SSV S++V+ +SV+ + LK A + + + Q Sbjct: 1 MASVVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQ 60 Query: 146 -MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 M V P FETFSYLPPLSD+ I QV+Y++ IPCLEF + + + R Sbjct: 61 CMQVWNPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDVN------SNGVSR 114 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 + S YYD RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQIC 174 Query: 503 VFL 511 FL Sbjct: 175 GFL 177 [52][TOP] >UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris vittata RepID=Q43110_PTEVI Length = 174 Score = 137 bits (346), Expect = 3e-31 Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 8/175 (4%) Frame = +2 Query: 11 LAAVIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPE-------GDPAQANQMMVCTPF 166 +A ++A +VSA + A A S + + LK AP+ + ++ + M+V P+ Sbjct: 1 MATMLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPY 60 Query: 167 NNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLY 346 +NK FET SYLPPL+++QI QV+Y+V GW PC+EF Y + GS Y Sbjct: 61 DNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFH----GSG---Y 113 Query: 347 YDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YD RYW MWKLPMFGC D VLREI +C K +P A++R++ FD +QVQ+ FL Sbjct: 114 YDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFL 168 [53][TOP] >UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9D5_PHYPA Length = 182 Score = 137 bits (345), Expect = 4e-31 Identities = 76/174 (43%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A ++ S+A + +SV+ + LK A + + Q M V P Sbjct: 10 MVAPAAFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ G IPCLEF + + + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFDVNA------DGVSRTNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSSQVLREIEECKKTFPGCFVRILGFDNVKQVQICGFL 177 [54][TOP] >UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X7_PHYPA Length = 182 Score = 137 bits (344), Expect = 6e-31 Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A ++ S+AV+ SSV+ + LK A + + + Q M V P Sbjct: 10 VVAPAAFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF + + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFDVNANG------VSRTNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFL 177 [55][TOP] >UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TT85_PHYPA Length = 183 Score = 137 bits (344), Expect = 6e-31 Identities = 80/182 (43%), Positives = 101/182 (55%), Gaps = 15/182 (8%) Frame = +2 Query: 11 LAAVIAKS---SVSAAVARPAR-----SSVRPMAALKPAVKAAPEGDPAQANQ------- 145 +A+ +A S VS A A PA +SV+ + LK A + + + Q Sbjct: 1 MASAVASSVVAPVSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQC 60 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P FETFSYLPPL+D++I QVDY++ IPC+EF +N S Sbjct: 61 MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS---- 116 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G+ S YYD RYWTMWKLPMFGC D QVLREI +C FP +VR++ FD KQVQI Sbjct: 117 GAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICG 176 Query: 506 FL 511 FL Sbjct: 177 FL 178 [56][TOP] >UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3X7_PHYPA Length = 179 Score = 136 bits (343), Expect = 7e-31 Identities = 79/177 (44%), Positives = 104/177 (58%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAA----VARPARSSVRPMAALKPAVKAAPEG-------DPAQANQMMVCT 160 +AV++ S V+AA V R + SSV+ + LK +A + + ++ M V Sbjct: 3 SAVVSVSIVAAASPASVCRES-SSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWN 61 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P FETFSYLPPL+D+QI QVD+++ IPC+EF +N S G S Sbjct: 62 PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSS 117 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVLREI +C ++FP +VR++ FD KQVQI FL Sbjct: 118 GYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFL 174 [57][TOP] >UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3R8_PHYPA Length = 181 Score = 136 bits (343), Expect = 7e-31 Identities = 81/183 (44%), Positives = 101/183 (55%), Gaps = 16/183 (8%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS---------VRPMAALKPAVKAAPEGDP-------AQAN 142 +A+++A S+V A A A SS V+ + LK A + + ++ N Sbjct: 1 MASIVAASTVVAPAAFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVN 60 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 M V P FETFSYLPPLSD+ I QV+Y++ IPCLEF S N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS--- 117 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 S YYD RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQIC 173 Query: 503 VFL 511 FL Sbjct: 174 GFL 176 [58][TOP] >UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X8_PHYPA Length = 182 Score = 136 bits (342), Expect = 1e-30 Identities = 77/174 (44%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A ++ S+AV SSV+ + LK A + + + Q M V P Sbjct: 10 VVAPAAFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF + + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFDVNANG------VSRTNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFL 177 [59][TOP] >UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3W5_PHYPA Length = 179 Score = 135 bits (340), Expect = 2e-30 Identities = 79/177 (44%), Positives = 103/177 (58%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAA----VARPARSSVRPMAALKPAVKAAPEG-------DPAQANQMMVCT 160 +AV++ S V+AA V R + SSV+ + LK A + + ++ M V Sbjct: 3 SAVVSVSIVAAASPAAVCRES-SSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWN 61 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P FETFSYLPPL+D+QI QVD+++ IPC+EF +N S G S Sbjct: 62 PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSS 117 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVLREI +C ++FP +VR++ FD KQVQI FL Sbjct: 118 GYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFL 174 [60][TOP] >UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis vinifera RepID=A7Q6D7_VITVI Length = 169 Score = 135 bits (340), Expect = 2e-30 Identities = 64/124 (51%), Positives = 77/124 (62%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M P NNK FET SYLPPLSD+ I ++DY++ GWIPCLEF + N I Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPG- 106 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 YYD RYWT+WKLPMFGC D QVL EI +C K +P+AY+R +AFD Q Q M Sbjct: 107 ------YYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQCMA 160 Query: 506 FLGQ 517 F+ Q Sbjct: 161 FVIQ 164 [61][TOP] >UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS3_LEMGI Length = 177 Score = 135 bits (340), Expect = 2e-30 Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 13/173 (7%) Frame = +2 Query: 32 SSVSAAVAR--PARSSVRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNN 172 +S +AAVAR PA+SS+ P A + PA + A G+ + + M V P Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQVWPPEGL 66 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + S YYD Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYD 119 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + F+ Sbjct: 120 GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 [62][TOP] >UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ4_9POAL Length = 169 Score = 135 bits (339), Expect = 2e-30 Identities = 68/164 (41%), Positives = 94/164 (57%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ A + A + + M V + NK FET SYL Sbjct: 5 VMASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL++EQ+ QVDY++ N W+PCLEF+ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E + ++PDAYVR++ FD +Q Q + F+ Sbjct: 118 PMFGCTDASQVYKEPQEAIASYPDAYVRILGFDNIRQTQCVSFI 161 [63][TOP] >UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRS0_PHYPA Length = 182 Score = 135 bits (339), Expect = 2e-30 Identities = 76/174 (43%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A S+ S+AV+ +SV+ + LK + + + Q M V P Sbjct: 10 VVAPAALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF + + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDVNANG------VSRANNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFL 177 [64][TOP] >UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RG04_PHYPA Length = 184 Score = 135 bits (339), Expect = 2e-30 Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 7/173 (4%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKP-------AVKAAPEGDPAQANQMMVCTPFNN 172 AA +A SS + V+ +SV+ + LK A K + + ++ M V P Sbjct: 15 AAFVAASS--SGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSRVQCMQVWNPIGM 72 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 FETFSYLPPLSD+ I QV+Y++ IPCLEF + + + R + S YYD Sbjct: 73 TKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDVN------SNGVSRVNNSSPGYYD 126 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC+D QVLREI +C K FP YVR++ FD KQVQI FL Sbjct: 127 GRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRVLGFDNVKQVQICGFL 179 [65][TOP] >UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWU8_PHYPA Length = 183 Score = 134 bits (338), Expect = 3e-30 Identities = 77/174 (44%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A ++ S+AV+ SSV+ + LK + + + Q M V P Sbjct: 12 VVAPTAFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIG 71 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF ++ +N S S YY Sbjct: 72 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYY 124 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 125 DGRYWTMWKLPMFGCNDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFL 178 [66][TOP] >UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U377_PHYPA Length = 182 Score = 134 bits (337), Expect = 4e-30 Identities = 76/174 (43%), Positives = 97/174 (55%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 + A A ++ SA+V +SV+ + LK A + + Q M V P Sbjct: 10 IVAPAAFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQCMQVWNPIG 69 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF + + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDVNANG------VSRTNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFL 177 [67][TOP] >UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJ57_PHYPA Length = 181 Score = 134 bits (337), Expect = 4e-30 Identities = 81/183 (44%), Positives = 104/183 (56%), Gaps = 16/183 (8%) Frame = +2 Query: 11 LAAVIAKSSVSA----AVARPARSS-----VRPMAALKPAVKAAPEGDPAQANQ------ 145 +A+ +A S+V A A A PA S+ V+ + LK A + + + + Q Sbjct: 1 MASTVAASAVVAPTAFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQ 60 Query: 146 -MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 M V P FETFSYLPPLSD+ I QV+Y++ IPCLEF ++ +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS--- 117 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 S YYD RYWTMWKLPMFGC+D QVLREI +C K FP +VR++ FD KQVQI Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQVQIC 173 Query: 503 VFL 511 FL Sbjct: 174 GFL 176 [68][TOP] >UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Zantedeschia aethiopica RepID=RBS_ZANAE Length = 178 Score = 134 bits (336), Expect = 5e-30 Identities = 75/170 (44%), Positives = 99/170 (58%), Gaps = 13/170 (7%) Frame = +2 Query: 41 SAAVAR--PARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKMF 181 +AAV+R PA+S+ V P A L P + + +N M V P K F Sbjct: 9 TAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPSNGLRVRCMQVWPPEGKKKF 68 Query: 182 ETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRY 361 ET SYLPPL+ EQ+ +VDY++ NGWIPC+EF Y + S YYD RY Sbjct: 69 ETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN-------SPGYYDGRY 121 Query: 362 WTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WTMWKLPMFGC D QVL+E+ +C+KA+PD + R++ FD +QVQ + FL Sbjct: 122 WTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFL 171 [69][TOP] >UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M9_PHYPA Length = 182 Score = 133 bits (335), Expect = 6e-30 Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 +A A + S+ V+ +SV+ + LK A + + Q M V P Sbjct: 11 VAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIG 70 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF S+ + R + S YY Sbjct: 71 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C FP YVR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRVLGFDNVKQVQICGFL 177 [70][TOP] >UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M6_PHYPA Length = 182 Score = 133 bits (335), Expect = 6e-30 Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 7/174 (4%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFN 169 +A A + S+ V+ +SV+ + LK A + + Q M V P Sbjct: 11 VAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIG 70 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 FETFSYLPPLSD+ I QV+Y++ IPCLEF S+ + R + S YY Sbjct: 71 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYY 123 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC+D QVLREI +C FP YVR++ FD KQVQI FL Sbjct: 124 DGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRVLGFDNVKQVQICGFL 177 [71][TOP] >UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PI67_POPTR Length = 170 Score = 133 bits (335), Expect = 6e-30 Identities = 72/166 (43%), Positives = 94/166 (56%), Gaps = 7/166 (4%) Frame = +2 Query: 41 SAAVARPARSSVRPMAALKP-------AVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 ++AVA P +R + +P A + + ++ M P NNK FE SYL Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS++ I ++DY++ GWIPCLEF S+ R S YYD RYWT+WKL Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVG-------SVRREHSRMPGYYDGRYWTLWKL 120 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLGQ 517 PMFGC D QVL EI +C KA+PDAY+R +AFD Q Q M F+ Q Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQ 166 [72][TOP] >UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI Length = 188 Score = 133 bits (335), Expect = 6e-30 Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 16/176 (9%) Frame = +2 Query: 32 SSVSAAVARPARSSVRPMAALKPAVKAAPEGDPA----------------QANQMMVCTP 163 SS +A P ++ V+ +A+ A+ G A + + M V P Sbjct: 11 SSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGSRVHCMQVWPP 70 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF A + +N G + Sbjct: 71 INNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN------GVMVPG 124 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYW++WKLPMFGC + QVL E+ +C KA+P+AY+R + FD +Q Q + F+ Sbjct: 125 YYDGRYWSLWKLPMFGCTNSAQVLSELEECKKAYPNAYIRCLGFDNKRQTQCIAFI 180 [73][TOP] >UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL Length = 121 Score = 133 bits (334), Expect = 8e-30 Identities = 60/117 (51%), Positives = 78/117 (66%) Frame = +2 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 + NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF+ Y N S S Sbjct: 5 YGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPC 57 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFLG 514 YYD RYWTMWKLPMFGC D QV +E+ + ++PDAYVR++ FD +Q Q + F+G Sbjct: 58 YYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIRQTQCVSFIG 114 [74][TOP] >UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVU8_PHYPA Length = 176 Score = 132 bits (333), Expect = 1e-29 Identities = 74/169 (43%), Positives = 94/169 (55%), Gaps = 7/169 (4%) Frame = +2 Query: 26 AKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFNNKMFE 184 A ++ S+ ++ +S + LK A + + Q M V P FE Sbjct: 10 AFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVWNPIGQTKFE 69 Query: 185 TFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYW 364 TFSYLPPLSD+ I QV+Y++ IPCLEF S+ + R + S YYD RYW Sbjct: 70 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYYDGRYW 122 Query: 365 TMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 TMWKLPMFGC+D QVLREI +C K FP YVR++ FD KQVQI FL Sbjct: 123 TMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRVLGFDNVKQVQICGFL 171 [75][TOP] >UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Zea mays RepID=RBS_MAIZE Length = 170 Score = 132 bits (333), Expect = 1e-29 Identities = 67/164 (40%), Positives = 94/164 (57%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 ++A S+ + A + +S+ A + + + + M V + NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS + + QVDY++ NGWIPCLEF+ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E+ + K++PDA+ R++ FD KQ Q + F+ Sbjct: 119 PMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFI 162 [76][TOP] >UniRef100_A4SA23 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA23_OSTLU Length = 177 Score = 132 bits (332), Expect = 1e-29 Identities = 61/116 (52%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 167 NNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFG-SVSCL 343 + +MFETFS+LPPLSD +I QV Y++ NGW PC+EF S AY S++ Sbjct: 43 SRRMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAG 102 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYDNRYW MWKLPM+GC++ +V+ EI C K FPD YVR+ FD KQVQ FL Sbjct: 103 YYDNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPDCYVRVAGFDNIKQVQCSAFL 158 [77][TOP] >UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia sinensis RepID=A0FIP7_CAMSI Length = 176 Score = 132 bits (332), Expect = 1e-29 Identities = 72/177 (40%), Positives = 98/177 (55%), Gaps = 14/177 (7%) Frame = +2 Query: 23 IAKSSVSAAVARPARSSVR-PMAALKPA-------------VKAAPEGDPAQANQMMVCT 160 +A S +S+AV PA++S+ P LK A G Q M V Sbjct: 1 MAASIISSAVVAPAQASMAAPFTGLKSTSAFPVTRKLDTDITSLASNGGRVQC--MKVWP 58 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ + R + S Sbjct: 59 PLGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFSVQ------GGFVYREHNKSP 112 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL+E+ +C K +P +++R++ FD +QVQ + F+ Sbjct: 113 GYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRIIGFDNKRQVQCISFI 169 [78][TOP] >UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng RepID=Q3LFQ4_PANGI Length = 183 Score = 132 bits (331), Expect = 2e-29 Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 13/180 (7%) Frame = +2 Query: 11 LAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MM 151 +A+ + S+ AAV+R PA++S V P LK P + + +N M Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60 Query: 152 VCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGS 331 V P K FET SYLP L+ EQ+ +VDY++ +GW+PCLEF + + R Sbjct: 61 VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELE------HGFVYREHH 114 Query: 332 VSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL+E+ +C K +P+AY+R++ FD +QVQ + F+ Sbjct: 115 HSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFI 174 [79][TOP] >UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG3_OSTTA Length = 191 Score = 131 bits (330), Expect = 2e-29 Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 24/158 (15%) Frame = +2 Query: 110 AAPEGDPAQANQMMVCTPFNNK-----------------------MFETFSYLPPLSDEQ 220 A G A A MM+ P NK MFETFS+LPPLSD + Sbjct: 15 AVSTGKVANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAE 74 Query: 221 IDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF-GSVSCLYYDNRYWTMWKLPMFGCR 397 I Q Y++ NGW PC+EF ++ AYA S++ LYYDNRYW MWKLPM+GC+ Sbjct: 75 IAKQCQYLLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQ 134 Query: 398 DHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 + +VL E+ K FPD Y+R+V FD KQVQ FL Sbjct: 135 NTDEVLAEVNMAKKCFPDCYIRVVGFDNIKQVQCAGFL 172 [80][TOP] >UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY Length = 82 Score = 131 bits (330), Expect = 2e-29 Identities = 60/81 (74%), Positives = 64/81 (79%) Frame = +2 Query: 152 VCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGS 331 V P NNK FETFSYLPPLS +QI QVDYIV NGW PCLEFA D AY SN+S +RFG+ Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60 Query: 332 VSCLYYDNRYWTMWKLPMFGC 394 VS Y DNRYWTMWKLPMFGC Sbjct: 61 VSVGYQDNRYWTMWKLPMFGC 81 [81][TOP] >UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Betula pendula RepID=RBS_BETVE Length = 182 Score = 131 bits (330), Expect = 2e-29 Identities = 78/183 (42%), Positives = 101/183 (55%), Gaps = 16/183 (8%) Frame = +2 Query: 11 LAAVIAKSSVSAAVAR--PARSS-VRPMAALKPA-------------VKAAPEGDPAQAN 142 +A + S+ AAV+R PA+SS V P LK A G Q Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQC- 59 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 M V P K FET SYLPPLS EQ+ +VDY++ IPCLEF + + R Sbjct: 60 -MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELE------HGFVYR 112 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 + S YYD RYWTMWKLPMFGC D QVL+E+ +C KA+P A++R++ FD +QVQI+ Sbjct: 113 EHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQII 172 Query: 503 VFL 511 F+ Sbjct: 173 SFI 175 [82][TOP] >UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Spinacia oleracea RepID=RBS2_SPIOL Length = 180 Score = 131 bits (330), Expect = 2e-29 Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQAN----QMMVCTP 163 ++V++ ++V+ PA++S V P LK PA K + +N Q M P Sbjct: 3 SSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWP 62 Query: 164 FNN-KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 N K +ET SYLPPL+ +Q+ QVDY++ N W+PCLEF +D + E G Sbjct: 63 TQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFE-TDHGFVYREHHNSPG---- 117 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ +C K +P+A++R++ FD ++QVQ + F+ Sbjct: 118 -YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFI 173 [83][TOP] >UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS1_SOLLC Length = 181 Score = 131 bits (330), Expect = 2e-29 Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 13/180 (7%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPEGDPAQANQMM 151 +A+ I S+ +A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 152 VCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGS 331 V P N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF +++ + E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFE-TERGFVYRENNSSPG- 118 Query: 332 VSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ + KA+P A+VR++ FD +QVQ + F+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFI 174 [84][TOP] >UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T529_SOYBN Length = 172 Score = 131 bits (329), Expect = 3e-29 Identities = 60/122 (49%), Positives = 76/122 (62%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M P NNK FET SYLPPLSDE I ++DY++ GWIPCLEF N + Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 YYD RYWT+WKLPMF C D QVL+EI +C + +P+AY+R +AFD + +Q M Sbjct: 107 ------YYDGRYWTLWKLPMFACSDSSQVLKEIHECRRVYPNAYIRCLAFDNQRHMQSMA 160 Query: 506 FL 511 F+ Sbjct: 161 FI 162 [85][TOP] >UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS2A_SOLLC Length = 180 Score = 131 bits (329), Expect = 3e-29 Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALK-----PAVK------AAPEGDPAQANQMMVCT 160 AAV +S+V+ A S V P LK P K + + + + M V Sbjct: 9 AAVATRSNVTQA------SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWP 62 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF + + R + S Sbjct: 63 PINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETE------HGFVYRENNKSP 116 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ + KA+P A+VR++ FD +QVQ + F+ Sbjct: 117 GYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFI 173 [86][TOP] >UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia oleracea RepID=O20253_SPIOL Length = 180 Score = 130 bits (328), Expect = 4e-29 Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQAN----QMMVCTP 163 ++V++ + V+ PA++S V P LK PA K + +N Q M P Sbjct: 3 SSVLSSARVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWP 62 Query: 164 FNN-KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 N K +ET SYLPPL+ +Q+ QVDY++ N W+PCLEF +D + E G Sbjct: 63 TQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFE-TDHGFVYREHHNSPG---- 117 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ +C K +P+A++R++ FD ++QVQ + F+ Sbjct: 118 -YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFI 173 [87][TOP] >UniRef100_Q67IU5 Ribulose bisphosphate carboxylase small chain n=2 Tax=Oryza sativa RepID=Q67IU5_ORYSJ Length = 183 Score = 130 bits (328), Expect = 4e-29 Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 3/168 (1%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ---MMVCTPFNNKMFET 187 A +V A+ +PA+ VR + P A G + + M PF N+ +E Sbjct: 6 ASFVAGAVVASPEQPAKL-VRDQRRVVPGSCRARRGAASNGFRTYCMQTWNPFTNRRYEA 64 Query: 188 FSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWT 367 SYLPPLS + I ++++I++ GW+PCLEF + + SN + YYD RYWT Sbjct: 65 MSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPG-------YYDGRYWT 117 Query: 368 MWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 +WKLPMFGC D VLRE+ +C + +PDA++RL+AFD +Q Q M F+ Sbjct: 118 LWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFV 165 [88][TOP] >UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS4_LEMGI Length = 177 Score = 130 bits (328), Expect = 4e-29 Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 13/173 (7%) Frame = +2 Query: 32 SSVSAAVAR--PARSSVRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNN 172 +S +AAVAR PA++++ P A + PA + A + + + M V P Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQVWPPEGL 66 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + S YYD Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYD 119 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + F+ Sbjct: 120 GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 [89][TOP] >UniRef100_A4SA21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA21_OSTLU Length = 134 Score = 130 bits (327), Expect = 5e-29 Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 1/114 (0%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFG-SVSCLYY 349 +MFETFS+LPPLSD +I QV Y++ NGW PC+EF S AY S++ YY Sbjct: 2 RMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYY 61 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 DNRYW MWKLPM+GC++ +V+ EI C K FP+ YVR+ FD KQVQ FL Sbjct: 62 DNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPECYVRVAGFDNIKQVQCSAFL 115 [90][TOP] >UniRef100_P19311 Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS5_LEMGI Length = 177 Score = 130 bits (327), Expect = 5e-29 Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMV 154 +A+ + S+ + A A PA+SS V P L+ PA + A + + + M V Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------- 113 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + F+ Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 [91][TOP] >UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9S5G3_RICCO Length = 181 Score = 130 bits (326), Expect = 7e-29 Identities = 72/174 (41%), Positives = 97/174 (55%), Gaps = 14/174 (8%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALKPAVK-------------AAPEGDPAQANQMMVCTPFN 169 SS S + + PA+++ V P LK A A G Q M V P Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQC--MQVWPPLG 64 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 K FET SYLP L+DEQ+ +VDY++ GWIPCLEF + + R S YY Sbjct: 65 KKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELE------HGFVYRENHRSPGYY 118 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC D QVL+E+ + KA+P++++R++ FD +QVQ + F+ Sbjct: 119 DGRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFI 172 [92][TOP] >UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Silene latifolia subsp. alba RepID=RBS_SILPR Length = 177 Score = 130 bits (326), Expect = 7e-29 Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEG------------DPAQANQMMV 154 +A++++ ++V A + V P + LK + A P + + N M V Sbjct: 1 MASLMSNAAVVTASTAAQANMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQV 59 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P N K FET SYLP LS+E + +++Y++ GW+PCLEF + R + Sbjct: 60 WPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPA------HVYRENNK 113 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QV E+V+C A+PDA+VR++ FD +QVQ + F+ Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFI 172 [93][TOP] >UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Marchantia paleacea RepID=RBS_MARPA Length = 180 Score = 130 bits (326), Expect = 7e-29 Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 8/174 (4%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPEGDPAQANQMMVCTPFNN 172 AAV+ + SAA + V A LK V + + + ++ + M V P+NN Sbjct: 8 AAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNN 67 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 FET SYLPPLS + + Q+DY++ +GW PC+EF ++ R GS YYD Sbjct: 68 LKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTREGSTMPGYYD 120 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAF-PDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D VLREI +C K + Y+R + FD +QVQ F+ Sbjct: 121 GRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFI 174 [94][TOP] >UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Nicotiana RepID=RBS1_NICSY Length = 180 Score = 130 bits (326), Expect = 7e-29 Identities = 74/182 (40%), Positives = 99/182 (54%), Gaps = 13/182 (7%) Frame = +2 Query: 5 LKLAAVIAKSSVSAAVARPARSSVRPMAALKPAVK-------------AAPEGDPAQANQ 145 L AAV +S+V+ A + V P LK A A G Q Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQC-- 57 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF + + R Sbjct: 58 MQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 112 NNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [95][TOP] >UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RBS1A_ARATH Length = 180 Score = 130 bits (326), Expect = 7e-29 Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 14/177 (7%) Frame = +2 Query: 23 IAKSSVSAA--VARPARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMVCT 160 +A S +S+A VA PA+++ V P LK PA + A + + N M V Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P K FET SYLP L+D ++ +VDY++ N WIPC+EF + + R S Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELE------HGFVYREHGNSP 114 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLP+FGC D QVL+E+ +C K +P+A++R++ FD +QVQ + F+ Sbjct: 115 GYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFI 171 [96][TOP] >UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=O24574_MAIZE Length = 170 Score = 129 bits (325), Expect = 9e-29 Identities = 66/164 (40%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 ++A S+ + A + +S+ A + + + M V + NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS + + QVDY++ NGWIPCLEF+ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E+ + A+PDA+ R++ FD +Q Q + F+ Sbjct: 119 PMFGCTDATQVYKELQEAIAAYPDAFHRVIGFDNVRQTQCVSFI 162 [97][TOP] >UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ8_SOLTU Length = 181 Score = 129 bits (325), Expect = 9e-29 Identities = 59/122 (48%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 59 MQVWPPINTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRE 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ +C K++P A++R++ FD +QVQ + Sbjct: 113 NHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [98][TOP] >UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWX2_PHYPA Length = 182 Score = 129 bits (325), Expect = 9e-29 Identities = 74/167 (44%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +2 Query: 32 SSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-------MMVCTPFNNKMFETF 190 ++ S++VA +V+ LK A + + Q M V P FETF Sbjct: 17 AAASSSVASSDSVTVKASTCLKGPTFFASKSQKLSSVQNGSRVQCMQVWNPIGMTKFETF 76 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPLSDE I QV+Y++ IPCLEF + K + R + S YYD RYWTM Sbjct: 77 SYLPPLSDEAIAKQVEYMIQQKLIPCLEFDLNSKG------VSRDNNSSPGYYDGRYWTM 130 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WKLPMFGC D QVLREI +C FP+ +VR++ FD KQVQI FL Sbjct: 131 WKLPMFGCNDSAQVLREIQECKTTFPNCWVRVLGFDNVKQVQICGFL 177 [99][TOP] >UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS3_SOLTU Length = 181 Score = 129 bits (325), Expect = 9e-29 Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVK------------AAPEGDPAQANQMMVC 157 AAV +S+V+ A S V P LK A + + + M V Sbjct: 9 AAVATRSNVAQA------SMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVW 62 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 P N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF + + R S Sbjct: 63 PPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRENHKS 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFI 174 [100][TOP] >UniRef100_P19308 Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic n=1 Tax=Lemna gibba RepID=RBS2_LEMGI Length = 177 Score = 129 bits (325), Expect = 9e-29 Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEG------DPAQANQMMV 154 +A+ + S+ + A A PA+S+ V P L+ PA + A + + + + M V Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------- 113 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + F+ Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 [101][TOP] >UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=B7ZYT6_MAIZE Length = 153 Score = 129 bits (324), Expect = 1e-28 Identities = 61/123 (49%), Positives = 78/123 (63%) Frame = +2 Query: 143 QMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR 322 +M V + NK FET SYLPPLS + + QVDY++ NGWIPCLEF+ Y N Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 S S YYD RYWTMWKLPMFGC D QV +E+ + A+PDA+ R++ FD +Q Q + Sbjct: 85 --STSPCYYDGRYWTMWKLPMFGCTDATQVYKELQEAIAAYPDAFHRVIGFDNVRQTQCV 142 Query: 503 VFL 511 F+ Sbjct: 143 SFI 145 [102][TOP] >UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSB_SOLTU Length = 180 Score = 129 bits (324), Expect = 1e-28 Identities = 71/179 (39%), Positives = 99/179 (55%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK-----------AAPEGDPAQANQMMV 154 +A+ I S+ A A A++S V P LK + + + M V Sbjct: 1 MASSIVSSAAVATRANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF + + R + Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRENNK 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + F+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFI 173 [103][TOP] >UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ7_SOLTU Length = 181 Score = 129 bits (323), Expect = 2e-28 Identities = 59/122 (48%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRE 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ +C K++P A++R++ FD +QVQ + Sbjct: 113 NHKSPGYYDGRYWTMWKLPMFGCTDTTQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [104][TOP] >UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSA_SOLTU Length = 180 Score = 129 bits (323), Expect = 2e-28 Identities = 68/177 (38%), Positives = 98/177 (55%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVK-----------AAPEGDPAQANQMMVCT 160 ++V++ ++V+ S V P LK A + + + M V Sbjct: 3 SSVMSSAAVATRGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWP 62 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF + + R + S Sbjct: 63 PINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRENNKSP 116 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + F+ Sbjct: 117 GYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFI 173 [105][TOP] >UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS1_SOLTU Length = 181 Score = 129 bits (323), Expect = 2e-28 Identities = 59/122 (48%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRE 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ +C K++P A++R++ FD +QVQ + Sbjct: 113 NHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [106][TOP] >UniRef100_Q84QE5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nicotiana tabacum RepID=Q84QE5_TOBAC Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 13/182 (7%) Frame = +2 Query: 5 LKLAAVIAKSSVSAAVARPARSSVRPMAALKPAVK-------------AAPEGDPAQANQ 145 L AAV +++V+ A + V P LK A A G Q Sbjct: 6 LSSAAVATRTNVAQA------NMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQC-- 57 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P+ K +ET SYLP LS+EQ+ ++++Y++ NGW+PCLEF +++ + E+ Sbjct: 58 MQVWPPYGKKKYETLSYLPDLSEEQLLSEIEYLLKNGWVPCLEFE-TERGFVYREN---- 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QVL E+ + KA+P+A++R++ FD +QVQ + Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVGEAKKAYPEAWIRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [107][TOP] >UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSC_SOLTU Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 60/122 (49%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 112 NNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [108][TOP] >UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3B_SOLLC Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 60/122 (49%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF + + R Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A+VR++ FD +QVQ + Sbjct: 112 NHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [109][TOP] >UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 60/122 (49%), Positives = 80/122 (65%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF + + R Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A+VR++ FD +QVQ + Sbjct: 112 NHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [110][TOP] >UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY Length = 181 Score = 128 bits (322), Expect = 2e-28 Identities = 72/182 (39%), Positives = 98/182 (53%), Gaps = 15/182 (8%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPAR--SSVRPMAALKPAVK-------------AAPEGDPAQANQ 145 +A +I S+ + A A S + P LK A A G Q Sbjct: 1 MAFLIMSSAAAVATGTNAAQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQC-- 58 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 59 MQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETE------HGFVYRE 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 113 NNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [111][TOP] >UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca sativa RepID=Q9SEB9_LACSA Length = 181 Score = 127 bits (320), Expect = 3e-28 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 14/174 (8%) Frame = +2 Query: 32 SSVSAAVAR--PARSSVR-PMAALK-----PAVKAAPE------GDPAQANQMMVCTPFN 169 SS A V R PA++S+ P LK P K A + + M V P Sbjct: 6 SSAVATVNRSTPAQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIG 65 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 K +ET SYLPPLSDE + ++DY++ N W+PCLEF + + R S YY Sbjct: 66 LKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELE------HGFVYREHHHSPGYY 119 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLPMFGC D QV++E+ +C K +P+A++R++ FD +QVQ + F+ Sbjct: 120 DGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFI 173 [112][TOP] >UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA Length = 174 Score = 127 bits (320), Expect = 3e-28 Identities = 65/161 (40%), Positives = 90/161 (55%) Frame = +2 Query: 29 KSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPL 208 KS S V R S + +A + + M+V P K FET SYLPPL Sbjct: 22 KSMASFPVPRKVNSDITTIA-----------NNGGRVQCMLVWPPLGRKKFETLSYLPPL 70 Query: 209 SDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMF 388 S E + +V+Y++ GW+PCLEF + + R + S YYD RYWTMWKLPMF Sbjct: 71 SIESLTKEVEYLLRKGWVPCLEFELE------HGFVYRENNRSPGYYDGRYWTMWKLPMF 124 Query: 389 GCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 GC D QV++E+ +C K +P A+VR++ FD +QVQ + F+ Sbjct: 125 GCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFI 165 [113][TOP] >UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Medicago sativa RepID=RBS_MEDSA Length = 180 Score = 127 bits (320), Expect = 3e-28 Identities = 58/126 (46%), Positives = 82/126 (65%) Frame = +2 Query: 134 QANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNES 313 + N M V P K FET SYLPPL++EQ+ +V+Y++ GWIPCLEF +K + E+ Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFEL-EKGFVYREN 112 Query: 314 IIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQV 493 G YYD RYWTMW+LP+FG D QVL+E+ DC +PD+++R++ FD +QV Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQV 167 Query: 494 QIMVFL 511 Q + F+ Sbjct: 168 QCISFI 173 [114][TOP] >UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Lactuca sativa RepID=RBS_LACSA Length = 181 Score = 127 bits (320), Expect = 3e-28 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 5/172 (2%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ-----MMVCTPFNNK 175 +A V +S A++A P + ++ A KA + +N M V P K Sbjct: 9 IATVNRTTSTQASLAAPF-TGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLK 67 Query: 176 MFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDN 355 +ET SYLPPLSDE + ++DY++ N WIPCLEF + + R S YYD Sbjct: 68 KYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELE------HGFVYREHHHSPGYYDG 121 Query: 356 RYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV++E+ +C K +P+A++R++ FD +QVQ + F+ Sbjct: 122 RYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173 [115][TOP] >UniRef100_P08705 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Helianthus annuus RepID=RBS_HELAN Length = 178 Score = 127 bits (320), Expect = 3e-28 Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 16/176 (9%) Frame = +2 Query: 32 SSVSAAVARPARSS------VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTP 163 +S+S++VA +R++ V P LK P K A + +N M V P Sbjct: 2 ASISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K +ET SYLPPL++ Q+ +VDY++ W+PCLEF + + R + S Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELE------HGFVYRENARSPG 115 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ ++F+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171 [116][TOP] >UniRef100_P10647 Ribulose bisphosphate carboxylase small chain C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS0_SOLTU Length = 181 Score = 127 bits (320), Expect = 3e-28 Identities = 71/178 (39%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVK------------AAPEGDPAQANQMMVC 157 AAV +S+V+ A S V P LK A + + + M V Sbjct: 9 AAVATRSNVAQA------SMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVW 62 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 P N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF + + R + S Sbjct: 63 PPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETE------HGFVYREHNSS 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QVL E+ + A+P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFI 174 [117][TOP] >UniRef100_Q39746 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS4_FLAPR Length = 178 Score = 127 bits (319), Expect = 4e-28 Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 11/176 (6%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTP 163 A I+ + + + A PA+++ V P LK PA K A + +N M V P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S Sbjct: 62 LGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPG 115 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 171 [118][TOP] >UniRef100_Q39744 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS2_FLAPR Length = 178 Score = 127 bits (319), Expect = 4e-28 Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 11/176 (6%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTP 163 A I+ + + + A PA+++ V P LK PA K A + +N M V P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S Sbjct: 62 LGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPG 115 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 171 [119][TOP] >UniRef100_A9YTZ9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ9_SOLTU Length = 181 Score = 127 bits (318), Expect = 6e-28 Identities = 58/122 (47%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF + + R Sbjct: 59 MQVWPPINTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETE------HGIVYRE 112 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYW MWKLPMFGC D QVL E+ +C K++P A++R++ FD +QVQ + Sbjct: 113 KHKSPGYYDGRYWNMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [120][TOP] >UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus olitorius RepID=A7LIT5_9ROSI Length = 183 Score = 127 bits (318), Expect = 6e-28 Identities = 72/181 (39%), Positives = 98/181 (54%), Gaps = 14/181 (7%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPA-------------VKAAPEGDPAQANQM 148 +A+ + S+ A PA+++ V P LK A A G Q M Sbjct: 1 MASAMMSSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQC--M 58 Query: 149 MVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFG 328 V P K FET SYLP L+ Q+ +VDY++ +GWIPCLEF + + R Sbjct: 59 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELE------HGFVYREH 112 Query: 329 SVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVF 508 S YYD RYWTMWKLPMFGC D QVL+E+ + KA+PDA++R++ FD +QVQ + F Sbjct: 113 HHSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISF 172 Query: 509 L 511 + Sbjct: 173 I 173 [121][TOP] >UniRef100_P26573 Ribulose bisphosphate carboxylase small chain 8B, chloroplastic n=1 Tax=Nicotiana plumbaginifolia RepID=RBS8_NICPL Length = 180 Score = 127 bits (318), Expect = 6e-28 Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 13/182 (7%) Frame = +2 Query: 5 LKLAAVIAKSSVSAAVARPARSSVRPMAALKPAVK-------------AAPEGDPAQANQ 145 L AAV +S+V+ A + V P LK A A G Q Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQC-- 57 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P N K +ET SYLP LS EQ+ ++++Y++ +GW+PCLEF +++ + E Sbjct: 58 MQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFE-TERGFVYREHHHSP 116 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G YYD RYWTMWKLPMFGC D QVL E+ + KA+P A+VR++ FD +QVQ + Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [122][TOP] >UniRef100_Q41351 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Stellaria longipes RepID=RBS_STELP Length = 180 Score = 126 bits (317), Expect = 8e-28 Identities = 65/161 (40%), Positives = 93/161 (57%) Frame = +2 Query: 29 KSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPL 208 KS+ S V+R + +A+ V+ M V P N K +ET SYLP L Sbjct: 30 KSNASFPVSRKTNLDITSIASNGGRVRC-----------MQVWPPINMKKYETLSYLPDL 78 Query: 209 SDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMF 388 S EQ+ ++++Y++ NGW+PCLEF + + R + S YYD RYWTMWKLPMF Sbjct: 79 SSEQLLSEIEYLLKNGWVPCLEFETE------HGFVYREHTSSPGYYDGRYWTMWKLPMF 132 Query: 389 GCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 GC D QV E+ + KA+PDA++R++ FD +QVQ + F+ Sbjct: 133 GCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFI 173 [123][TOP] >UniRef100_P19312 Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS6_LEMGI Length = 177 Score = 126 bits (317), Expect = 8e-28 Identities = 71/171 (41%), Positives = 99/171 (57%), Gaps = 14/171 (8%) Frame = +2 Query: 41 SAAVAR--PARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNNKM 178 +AAVAR PA+++ V P L+ PA + A + + + M V P K Sbjct: 9 TAAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKK 68 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + S YYD R Sbjct: 69 FETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYDGR 121 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + F+ Sbjct: 122 YWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 [124][TOP] >UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP Length = 180 Score = 126 bits (317), Expect = 8e-28 Identities = 70/173 (40%), Positives = 96/173 (55%), Gaps = 6/173 (3%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKPAVKA------APEGDPAQANQMMVCTPFNN 172 + AV+ S A + P + ++ +A+ K+ A G Q M V P Sbjct: 10 ITAVVGASGAQANMVAPF-NGLKSIASFPVTRKSNDITSIASNGGRVQC--MQVWPPVGK 66 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF + + R S Y D Sbjct: 67 KKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELE------HPFVYRENHRSPGYQD 120 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPM+GC D QVL E+ + KA+P A++R++ FD +QVQ + F+ Sbjct: 121 GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFI 173 [125][TOP] >UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY Length = 180 Score = 126 bits (317), Expect = 8e-28 Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 13/179 (7%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVK-------------AAPEGDPAQANQMMV 154 ++VI+ ++V+ S V P LK AV A G Q M V Sbjct: 3 SSVISSAAVATRTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQC--MQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P+ K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF + + R Sbjct: 61 WPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETE------HGFVYREYHA 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 115 SPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFI 173 [126][TOP] >UniRef100_P16032 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS1_MESCR Length = 182 Score = 126 bits (317), Expect = 8e-28 Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 13/179 (7%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVK-------AAPEGDPAQANQMMV 154 +++++ ++V+ PA++S V P LK P K A G Q M V Sbjct: 3 SSMVSSAAVATVNRTPAQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQC--MQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R Sbjct: 61 WPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPT------HGFVYREHGN 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 + YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 115 TPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFI 173 [127][TOP] >UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hordeum vulgare RepID=RBS_HORVU Length = 174 Score = 126 bits (316), Expect = 1e-27 Identities = 68/164 (41%), Positives = 93/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + +A + + M V K FET SYL Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYL 64 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS E + QVDY++ + W+PCLEF+ I R + S YYD RYWTMWKL Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVG-------FIFREHNASPGYYDGRYWTMWKL 117 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFI 161 [128][TOP] >UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY Length = 180 Score = 126 bits (316), Expect = 1e-27 Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 13/179 (7%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVK-------------AAPEGDPAQANQMMV 154 ++V++ ++V+ + S V P LK A A G Q M V Sbjct: 3 SSVMSSAAVATSTNAAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQC--MQV 60 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P+ K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF + + R Sbjct: 61 WPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETE------HGFVYREYHA 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 115 SPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFI 173 [129][TOP] >UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ5_WHEAT Length = 175 Score = 125 bits (315), Expect = 1e-27 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 1/166 (0%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 AV+A S+ S A + +S+ P++ + + +M V K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLS 63 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPLS E + QVDY++ + W+PCLEF+ I R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG-------FIFREHNASPGYYDGRYWTMW 116 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QV+ E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFI 162 [130][TOP] >UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum annuum RepID=Q6RWD8_CAPAN Length = 180 Score = 125 bits (315), Expect = 1e-27 Identities = 58/122 (47%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M+V P N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF + + R Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 112 HHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [131][TOP] >UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x domestica x Pyrus communis RepID=Q43115_9ROSA Length = 179 Score = 125 bits (315), Expect = 1e-27 Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 13/180 (7%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPA------------VKAAPEGDPAQANQMM 151 +A+ + S A V+ PA++ V P LK + A G Q M Sbjct: 1 MASSMISSGTVATVSAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQC--MQ 58 Query: 152 VCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGS 331 V P K FET SYLPPLS E + +VDY++ W+PCLEF + + R + Sbjct: 59 VWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELE------HGFVYRENN 112 Query: 332 VSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL+E+ + KA+P +++R++ FD +QVQ + F+ Sbjct: 113 RSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFI 172 [132][TOP] >UniRef100_A9NZM2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NZM2_PICSI Length = 159 Score = 125 bits (315), Expect = 1e-27 Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 2/159 (1%) Frame = +2 Query: 41 SAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPLSDEQ 220 S+ +A + ++V +AA + + M V P+NN FET SYLP L+ EQ Sbjct: 3 SSIMALSSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQ 62 Query: 221 IDAQVDYIVANGWIPCLEFAASDKAYASNESIIR--FGSVSCLYYDNRYWTMWKLPMFGC 394 + +V+Y++ N W+PCLEF + II+ +GS YYD RYW MWKLPMFGC Sbjct: 63 LLKEVEYLLRNKWVPCLEF--------DEDGIIKRKYGSTPG-YYDGRYWVMWKLPMFGC 113 Query: 395 RDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 + QVL E+ +C KA+P A++R++ FD +QVQ + F+ Sbjct: 114 TEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFI 152 [133][TOP] >UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Capsicum annuum RepID=RBS_CAPAN Length = 187 Score = 125 bits (315), Expect = 1e-27 Identities = 58/122 (47%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M+V P N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF + + R Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETE------HGFVYRE 111 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 112 HHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCIS 171 Query: 506 FL 511 F+ Sbjct: 172 FI 173 [134][TOP] >UniRef100_Q42516 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS1_AMAHP Length = 183 Score = 125 bits (315), Expect = 1e-27 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 11/173 (6%) Frame = +2 Query: 26 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNN 172 A + +AA A S V P LK P K + + + M V P Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGK 68 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF + + R S Y D Sbjct: 69 KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELE------HPFVYRENHRSPGYQD 122 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPM+GC D QVL E+ + KA+P A++R++ FD +QVQ + F+ Sbjct: 123 GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFI 175 [135][TOP] >UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer arietinum RepID=Q9ZP07_CICAR Length = 181 Score = 125 bits (314), Expect = 2e-27 Identities = 58/122 (47%), Positives = 82/122 (67%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF +K + E Sbjct: 59 MQVWPPIGKKKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEFEL-EKGFVYREHNNSP 117 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 G YYD RYWTMWKLP+FGC + +QVL+E+ + KA+P+A+VR++ FD +QVQ + Sbjct: 118 G-----YYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [136][TOP] >UniRef100_Q8VX71 Ribulose bisphosphate carboxylase small chain n=1 Tax=Rumex obtusifolius RepID=Q8VX71_RUMOB Length = 181 Score = 125 bits (314), Expect = 2e-27 Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 3/169 (1%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQ---MMVCTPFNNKMFE 184 +A +A+ S + A + ++ +A K++ P+ + M V P FE Sbjct: 8 SATVARPSAAQATVIAPFTGLKNIATFPTTRKSSDLSFPSNGGKVRCMQVWPPEGKIKFE 67 Query: 185 TFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYW 364 T SYLPPLS+ + AQ++Y++ NGW+PCLEF A + R S YYD RYW Sbjct: 68 TLSYLPPLSEADLLAQINYLLINGWVPCLEFDVGPGA------VYREHHHSPGYYDGRYW 121 Query: 365 TMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 TMWKLPMFGC D QV+ E+ + KA+P A+VR++ FD +QVQ + F+ Sbjct: 122 TMWKLPMFGCTDATQVVAELEEAKKAYPHAFVRIIGFDNVRQVQCVSFI 170 [137][TOP] >UniRef100_Q5ZF97 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF97_PLAMJ Length = 177 Score = 125 bits (314), Expect = 2e-27 Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 9/176 (5%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPEGDPAQ----ANQMMVCTP 163 +A+ + +S +A R + V P A LK PA + A+ M V P Sbjct: 1 MASSMLSTSSTAVAGRAQATMVAPYAGLKSTSVFPATRKTGNAKLARNAGKVRCMQVWPP 60 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K +ET SYLP L+ EQ+ ++DY++ + WIPCLEF + + R + S Sbjct: 61 LGKKKYETLSYLPDLTVEQLAKEIDYLLRSKWIPCLEFELE------HGFVYRENNRSPG 114 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV+ E+ +C K +P+A+VR++ FD +QVQ + F+ Sbjct: 115 YYDGRYWTMWKLPMFGCTDASQVIAELEECKKEYPNAWVRIIGFDNVRQVQCISFI 170 [138][TOP] >UniRef100_A5JPN4 Ribulose bisphosphate carboxylase small chain n=2 Tax=Musa acuminata RepID=A5JPN4_MUSAC Length = 180 Score = 125 bits (314), Expect = 2e-27 Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPA----VKAAPEGD----PAQAN--QMMVC 157 +++++ S+ + A PA+SS V P LK A V P D P+ Q M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKV 61 Query: 158 TPFNN-KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP L DE + Q++Y++ + WIPCLEF + N Sbjct: 62 WPIEGLKKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCPKGFVWRENHR------- 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D +QV +E+ +C K +P A++R++ FD ++QVQ + F+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFI 173 [139][TOP] >UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR Length = 182 Score = 125 bits (314), Expect = 2e-27 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 9/171 (5%) Frame = +2 Query: 26 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAPEGDPAQAN----QMMVCTPFNNKM 178 A ++++AA + V P LK P + + +N Q MV P K Sbjct: 9 AATTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMKK 68 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R + YYD R Sbjct: 69 FETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPT------HGFVYREHGNTPGYYDGR 122 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV+ E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 123 YWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFI 173 [140][TOP] >UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR Length = 183 Score = 125 bits (314), Expect = 2e-27 Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%) Frame = +2 Query: 26 AKSSVSAAVARPARSSVRPMAALKPAVKAAP-----------EGDPAQANQMMVCTPFNN 172 A ++++AA + V P LK +V A P + + M V P Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R + YYD Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPT------HGFVYREHGNTPGYYD 121 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV+ E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFI 174 [141][TOP] >UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR Length = 180 Score = 125 bits (314), Expect = 2e-27 Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 10/177 (5%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCT 160 +A++++ ++V S V P LK P K + + +N M V Sbjct: 1 MASMMSNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWP 60 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P K FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R + Sbjct: 61 PLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPT------HGFVYREHGNTP 114 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+A+ R++ FD +QVQ + F+ Sbjct: 115 GYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFI 171 [142][TOP] >UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ2_WHEAT Length = 175 Score = 125 bits (313), Expect = 2e-27 Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 AV+A S+ S A + +S+ P++ + + + + M V K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 162 [143][TOP] >UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ageratina adenophora RepID=C1JZ18_9ASTR Length = 178 Score = 125 bits (313), Expect = 2e-27 Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 11/176 (6%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPE-----GDPAQANQMMVCTP 163 A I+ S + + A PA+++ V P LK PA K A + + + M V P Sbjct: 2 ASISSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPP 61 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S Sbjct: 62 LGLKKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEFELE------HGFVYREHARSPG 115 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD R+WTMWKLPMFGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YYDGRHWTMWKLPMFGCTDSAQVLKEVGECKKEYPQAWIRIIGFDNVRQVQCISFI 171 [144][TOP] >UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T055_RICCO Length = 180 Score = 125 bits (313), Expect = 2e-27 Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 11/177 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPA----VKAAPEGD-------PAQANQMMVCT 160 ++++ + S A P S V P LK + V D + + M V Sbjct: 3 SSIVPSTMASLNRAAPQASMVAPFTGLKSSSVFPVTRKQNNDITTLASNGGKVHCMQVWP 62 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P K FET SYLPPLS+E + +VDY++ GW+PCLEF + + R S Sbjct: 63 PVGKKKFETLSYLPPLSEESLAKEVDYLLRMGWVPCLEFELE------HGFVYRENHRSP 116 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD R WTMWKLPMFGC D QVL+E+ + KA+P++++R++ FD +QVQ + F+ Sbjct: 117 GYYDGRCWTMWKLPMFGCTDSSQVLKELEEAKKAYPNSFIRIIGFDNKRQVQCISFI 173 [145][TOP] >UniRef100_B7FHB2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FHB2_MEDTR Length = 180 Score = 125 bits (313), Expect = 2e-27 Identities = 68/174 (39%), Positives = 97/174 (55%), Gaps = 17/174 (9%) Frame = +2 Query: 41 SAAVARPARSS------VRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFN 169 SAAV +R+S V P LK P K + + N M V P Sbjct: 6 SAAVTTVSRASSTQANLVAPFTGLKSSAAFPVTKKTNNDITSIASNGGRVNCMQVWPPIG 65 Query: 170 NKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYY 349 K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF +K + E+ G YY Sbjct: 66 KKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEFEL-EKGFVYRENHSSPG-----YY 119 Query: 350 DNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 D RYWTMWKLP+FG D QVL+E+ + A+P++++R++ FD +QVQ + F+ Sbjct: 120 DGRYWTMWKLPLFGATDSSQVLKELAEAKAAYPESFIRIIGFDNVRQVQCISFI 173 [146][TOP] >UniRef100_O24045 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Musa acuminata RepID=RBS_MUSAC Length = 180 Score = 125 bits (313), Expect = 2e-27 Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPA----VKAAPEGD----PAQAN--QMMVC 157 +++++ S+ + A PA+SS V P LK A V P D P+ Q M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKV 61 Query: 158 TPFNN-KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP + DE + Q++Y++ + WIPCLEF + N Sbjct: 62 WPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEFCPKGFVWRENHR------- 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D +QV +E+ +C K +P A++R++ FD ++QVQ + F+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFI 173 [147][TOP] >UniRef100_O22573 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS3_FRIAG Length = 179 Score = 125 bits (313), Expect = 2e-27 Identities = 71/178 (39%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPEGDPA-----------QANQMMVC 157 +A + S +AA A PA++S V P LK A PA + M V Sbjct: 4 SATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 K FET SYLP LS E + Q++Y++ NGW+PCLEF+ N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNK-------S 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E +C K +P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174 [148][TOP] >UniRef100_Q39745 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS3_FLAPR Length = 173 Score = 125 bits (313), Expect = 2e-27 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA A+++ V P LK P K + +N M V P K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 166 [149][TOP] >UniRef100_P00872 Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic n=1 Tax=Lemna gibba RepID=RBS1_LEMGI Length = 173 Score = 125 bits (313), Expect = 2e-27 Identities = 58/122 (47%), Positives = 77/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FET SYLPPLS E + +VDY++ N W+PC+EF+ Y N + Sbjct: 54 MQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNA---- 109 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+ +VR++ FD +QVQ + Sbjct: 110 ---SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 166 Query: 506 FL 511 F+ Sbjct: 167 FI 168 [150][TOP] >UniRef100_Q106Z4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z4_MUSAC Length = 180 Score = 124 bits (312), Expect = 3e-27 Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 13/179 (7%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPEGDPAQAN-----------QMMVC 157 ++++ S+ + + A PA+SS V P LK + A P A A+ Q M Sbjct: 3 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 61 Query: 158 TPFNNKM-FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP L DE + Q++Y++ + WIPCLEF S + + E+ G Sbjct: 62 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 117 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D +QV++E+ +C K +P A++R++ FD ++QVQ + F+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDNNRQVQCISFI 173 [151][TOP] >UniRef100_Q08186 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS6_MESCR Length = 186 Score = 124 bits (312), Expect = 3e-27 Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 12/177 (6%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAP------------EGDPAQANQMMVCT 160 A +A ++ S + A S V P LK +V A P + + M V Sbjct: 9 AAVATTAASRSAGAQA-SMVAPFTGLK-SVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWP 66 Query: 161 PFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSC 340 P K FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R + Sbjct: 67 PLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPT------HGFVYREHGNTP 120 Query: 341 LYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV+ E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 121 GYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFI 177 [152][TOP] >UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT Length = 174 Score = 124 bits (312), Expect = 3e-27 Identities = 66/165 (40%), Positives = 92/165 (55%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSY 196 AV+A S+ + A + +S+ + + + + M V K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 197 LPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWK 376 LPPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 116 Query: 377 LPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 LPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 161 [153][TOP] >UniRef100_Q39743 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS1_FLAPR Length = 173 Score = 124 bits (312), Expect = 3e-27 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA A+++ V P LK P K + +N M V P K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKK 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 166 [154][TOP] >UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL Length = 165 Score = 124 bits (311), Expect = 4e-27 Identities = 65/164 (39%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [155][TOP] >UniRef100_Q9FRZ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ4_WHEAT Length = 175 Score = 124 bits (311), Expect = 4e-27 Identities = 68/166 (40%), Positives = 93/166 (56%), Gaps = 1/166 (0%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 AV+A S+ S A + +S+ P++ + + M V K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPLS E + QVDY++ + W+PCLEF+ I R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG-------FIFREHNASPGYYDGRYWTMW 116 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QV+ E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFI 162 [156][TOP] >UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FEE4_WHEAT Length = 174 Score = 124 bits (311), Expect = 4e-27 Identities = 66/165 (40%), Positives = 93/165 (56%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSY 196 AV+A S+ + A + +S+ + + + + + M V K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 197 LPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWK 376 LPPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWK 116 Query: 377 LPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 LPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 161 [157][TOP] >UniRef100_Q84NG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG4_FLABI Length = 173 Score = 124 bits (311), Expect = 4e-27 Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVAR-PARSSVRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA P + V P LK P K +N M V P K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLKANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKKK 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPELTEAQLAKEVDYLIRNKWVPCLEFELE------HGFVYRENASSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFI 166 [158][TOP] >UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea brasiliensis RepID=B1PLM0_HEVBR Length = 183 Score = 124 bits (311), Expect = 4e-27 Identities = 60/122 (49%), Positives = 78/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FETF YLPPL+ EQ+ +V+Y+ GW+PCLEF + ++ R Sbjct: 60 MQVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEFELE------HGTVYRE 113 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D +QVL+E+ + KA+PD Y R++ FD +QVQ + Sbjct: 114 YHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCIS 173 Query: 506 FL 511 FL Sbjct: 174 FL 175 [159][TOP] >UniRef100_A9NNZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NNZ8_PICSI Length = 193 Score = 124 bits (311), Expect = 4e-27 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 27/193 (13%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS----------------VRPMAALKPAVKAAPEG------- 124 +A+++ ++ AAVA P ++S ++ A ++K + G Sbjct: 3 SAIMSSAAAMAAVAAPPKTSNGSGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKT 62 Query: 125 --DPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAY 298 + + M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF Sbjct: 63 TSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEF------- 115 Query: 299 ASNESIIR--FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVA 472 + II+ +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ Sbjct: 116 -DEDGIIKRKYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIG 173 Query: 473 FDIHKQVQIMVFL 511 FD +QVQ + F+ Sbjct: 174 FDNVRQVQCISFI 186 [160][TOP] >UniRef100_A9NML5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NML5_PICSI Length = 193 Score = 124 bits (311), Expect = 4e-27 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 27/193 (13%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS----------------VRPMAALKPAVKAAPEG------- 124 +A+++ ++ AAVA P ++S ++ A ++K + G Sbjct: 3 SAIMSSAAAMAAVAAPPKTSNGNGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKT 62 Query: 125 --DPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAY 298 + + M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF Sbjct: 63 TSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEF------- 115 Query: 299 ASNESIIR--FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVA 472 + II+ +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ Sbjct: 116 -DEDGIIKRKYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIG 173 Query: 473 FDIHKQVQIMVFL 511 FD +QVQ + F+ Sbjct: 174 FDNVRQVQCISFI 186 [161][TOP] >UniRef100_A9NMJ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NMJ1_PICSI Length = 193 Score = 124 bits (311), Expect = 4e-27 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 27/193 (13%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS----------------VRPMAALKPAVKAAPEG------- 124 +A+++ ++ AAVA P ++S ++ A ++K + G Sbjct: 3 SAIMSSAAAMAAVAAPPKTSNGNGSSNGNVVAAFTGLKSTAQFPSSMKISNAGAEWERKT 62 Query: 125 --DPAQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAY 298 + + M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF Sbjct: 63 TSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEF------- 115 Query: 299 ASNESIIR--FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVA 472 + II+ +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ Sbjct: 116 -DEDGIIKRKYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIG 173 Query: 473 FDIHKQVQIMVFL 511 FD +QVQ + F+ Sbjct: 174 FDNVRQVQCISFI 186 [162][TOP] >UniRef100_Q39749 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS7_FLAPR Length = 173 Score = 124 bits (311), Expect = 4e-27 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA A+++ V P LK P K + +N M V P K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKR 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 166 [163][TOP] >UniRef100_Q39747 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS5_FLAPR Length = 173 Score = 124 bits (311), Expect = 4e-27 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA A+++ V P LK P K + +N M V P K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 166 [164][TOP] >UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT Length = 175 Score = 124 bits (311), Expect = 4e-27 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 AV+A S+ + A + +S+ P++ + + + + M V K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFI 162 [165][TOP] >UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea arabica RepID=Q8GRJ7_COFAR Length = 181 Score = 124 bits (310), Expect = 5e-27 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 18/175 (10%) Frame = +2 Query: 41 SAAVARPARSS------VRPMAALKPA------------VKAAPEGDPAQANQMMVCTPF 166 SAAVA R+S V P LK A A G Q M V P Sbjct: 8 SAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQC--MQVWPPR 65 Query: 167 NNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLY 346 K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF +K + E G Y Sbjct: 66 GLKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEFEL-EKGFVYREYHRSPG-----Y 119 Query: 347 YDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YD RYWTMWKLPM+GC D QVL E+ +C K +P+ +VR++ FD +QVQ + F+ Sbjct: 120 YDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNCWVRIIGFDNVRQVQCISFI 174 [166][TOP] >UniRef100_Q42900 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Larix laricina RepID=Q42900_LARLA Length = 171 Score = 124 bits (310), Expect = 5e-27 Identities = 59/127 (46%), Positives = 81/127 (63%) Frame = +2 Query: 131 AQANQMMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNE 310 A+ M V P+ NK +ET SYLP L+ EQ+ +V+Y++ N W+PCLEF + Sbjct: 45 ARVRCMQVWPPYANKKWETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGE------ 98 Query: 311 SIIRFGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQ 490 I R S YYD RYW MWKLPMFGC + QVL E+ +C KA+P+AY+R++ FD +Q Sbjct: 99 -IKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAYIRVIGFDNVRQ 157 Query: 491 VQIMVFL 511 VQ + F+ Sbjct: 158 VQCISFI 164 [167][TOP] >UniRef100_C0PR41 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PR41_PICSI Length = 194 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 124 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 125 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 183 Query: 500 MVFL 511 + F+ Sbjct: 184 ISFI 187 [168][TOP] >UniRef100_C0PQS9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PQS9_PICSI Length = 194 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 124 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 125 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 183 Query: 500 MVFL 511 + F+ Sbjct: 184 ISFI 187 [169][TOP] >UniRef100_C0PPN4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPN4_PICSI Length = 136 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 15 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 66 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 67 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 125 Query: 500 MVFL 511 + F+ Sbjct: 126 ISFI 129 [170][TOP] >UniRef100_A9NM29 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NM29_PICSI Length = 194 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 124 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 125 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 183 Query: 500 MVFL 511 + F+ Sbjct: 184 ISFI 187 [171][TOP] >UniRef100_A9NLD6 Ribulose bisphosphate carboxylase small chain n=2 Tax=Picea sitchensis RepID=A9NLD6_PICSI Length = 194 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 124 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 125 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 183 Query: 500 MVFL 511 + F+ Sbjct: 184 ISFI 187 [172][TOP] >UniRef100_A9NL36 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NL36_PICSI Length = 195 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 74 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEF--------DEDGIIKR 125 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 126 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 184 Query: 500 MVFL 511 + F+ Sbjct: 185 ISFI 188 [173][TOP] >UniRef100_A9NKU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NKU8_PICSI Length = 194 Score = 124 bits (310), Expect = 5e-27 Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIR- 322 M V P+NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + II+ Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEF--------DEDGIIKR 124 Query: 323 -FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQI 499 +GS YYD RYW MWKLPMFGC + QVL E+ +C KA+P A++R++ FD +QVQ Sbjct: 125 KYGSTPG-YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQC 183 Query: 500 MVFL 511 + F+ Sbjct: 184 ISFI 187 [174][TOP] >UniRef100_Q41373 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Saccharum sp. RepID=RBS_SACHY Length = 168 Score = 124 bits (310), Expect = 5e-27 Identities = 64/164 (39%), Positives = 91/164 (55%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ +AA + +S+ A + A + + M V + NK FET SYL Sbjct: 5 VMASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL+ EQ+ QVDY++ N W+PCLEF+ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV +E+ + ++P+ ++ FD +Q Q + F+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPELRA-ILGFDNIRQTQWLTFI 160 [175][TOP] >UniRef100_P10053 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH Length = 171 Score = 124 bits (310), Expect = 5e-27 Identities = 58/122 (47%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V PF N FET SYLP L++EQ+ +V+Y++ N W+PCLEF SI R Sbjct: 52 MQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEG-------SISRK 104 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYW MWKLPMFGC + QV+ E+ +C KA+P A++R++ FD +QVQ + Sbjct: 105 YNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCIS 164 Query: 506 FL 511 F+ Sbjct: 165 FI 166 [176][TOP] >UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR Length = 183 Score = 124 bits (310), Expect = 5e-27 Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%) Frame = +2 Query: 26 AKSSVSAAVARPARSSVRPMAALKPAVKAAP-----------EGDPAQANQMMVCTPFNN 172 A ++++AA + V P LK ++ A P + + M V P Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS+E + +V Y++ NGW+PCLEF + + + R + YYD Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPT------HGFVYREHGNTPGYYD 121 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV+ E+ + KA+P+A++R++ FD +QVQ + F+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFI 174 [177][TOP] >UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS2B_ARATH Length = 181 Score = 124 bits (310), Expect = 5e-27 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK P + A + + + M V P K Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP LSD ++ +VDY++ N WIPC+EF + + R + YYD R Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE------HGFVYREHGNTPGYYDGR 120 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171 [178][TOP] >UniRef100_Q9SAW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Secale cereale RepID=Q9SAW4_SECCE Length = 165 Score = 123 bits (309), Expect = 6e-27 Identities = 66/164 (40%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [179][TOP] >UniRef100_Q9S7N3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Triticeae RepID=Q9S7N3_AEGLO Length = 165 Score = 123 bits (309), Expect = 6e-27 Identities = 65/164 (39%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [180][TOP] >UniRef100_Q106Z5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata AAA Group RepID=Q106Z5_MUSAC Length = 180 Score = 123 bits (309), Expect = 6e-27 Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSS-VRPMAALKPA----VKAAPEGD----PAQAN--QMMVC 157 +++++ S+ + A PA+SS V P LK A V P D P+ Q M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKV 61 Query: 158 TPFNN-KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP L DE + Q++Y++ + WIPCLEF + N Sbjct: 62 WPIEGVKKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCPKGFVWRENHR------- 114 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMW LPMFGC D +QV +E+ +C K +P A++R++ FD ++QVQ + F+ Sbjct: 115 SPGYYDGRYWTMWNLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCVSFI 173 [181][TOP] >UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T1N0_RICCO Length = 185 Score = 123 bits (309), Expect = 6e-27 Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 12/165 (7%) Frame = +2 Query: 53 ARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ------MMVCTPFNNKMFETFSY 196 A PA++S V P LK P + AN M V P K FET SY Sbjct: 17 ASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSY 76 Query: 197 LPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWK 376 LP L+ EQ+ +V+Y++ GW+PCLEF + + R + S YYD RYWTMWK Sbjct: 77 LPDLTREQLAKEVEYLLRKGWVPCLEFELE------HGFVYRENARSPGYYDGRYWTMWK 130 Query: 377 LPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 LPMFGC D +QVL+E+ + KA+P+++VR++ FD +QVQ + F+ Sbjct: 131 LPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFI 175 [182][TOP] >UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=B3H5S2_ARATH Length = 186 Score = 123 bits (309), Expect = 6e-27 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALKPAVK-----------AAPEGDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK + + + + + M V P K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP LSD ++ +VDY++ N WIPC+EF + + + R + YYD R Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL-EVINTKHGFVYREHGNTPGYYDGR 125 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 126 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 176 [183][TOP] >UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Raphanus sativus RepID=RBS_RAPSA Length = 181 Score = 123 bits (309), Expect = 6e-27 Identities = 62/161 (38%), Positives = 92/161 (57%) Frame = +2 Query: 29 KSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPL 208 KSS + V R + + +A+ + + + M V P K FET SYLP L Sbjct: 28 KSSAAFPVTRKTNTDITSIAS-----------NGGRVSCMKVWPPIGKKKFETLSYLPDL 76 Query: 209 SDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMF 388 SD ++ +VDY++ N WIPC+EF + + R + YYD RYWTMWKLP+F Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEFELE------HGFVYREHGSTPGYYDGRYWTMWKLPLF 130 Query: 389 GCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 GC D QVL+E+ +C K +P+A +R++ FD ++QVQ + F+ Sbjct: 131 GCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFI 171 [184][TOP] >UniRef100_P16031 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Larix laricina RepID=RBS_LARLA Length = 189 Score = 123 bits (309), Expect = 6e-27 Identities = 58/122 (47%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P+ NK FET SYLP L+ EQ+ +V+Y++ N W+PCLEF + I R Sbjct: 68 MQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGE-------IKRV 120 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYW MWKLPMFGC + QVL E+ +C KA+P+A++R++ FD +QVQ + Sbjct: 121 YGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCIS 180 Query: 506 FL 511 F+ Sbjct: 181 FI 182 [185][TOP] >UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hevea brasiliensis RepID=RBS_HEVBR Length = 183 Score = 123 bits (309), Expect = 6e-27 Identities = 59/122 (48%), Positives = 79/122 (64%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K +ET SYLPPL+ EQ+ +V+Y++ GW+PCLEF + ++ R Sbjct: 60 MQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELE------HGTVYRE 113 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D +QVL+E+ + KA+PD Y R++ FD +QVQ + Sbjct: 114 YHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCIS 173 Query: 506 FL 511 FL Sbjct: 174 FL 175 [186][TOP] >UniRef100_P07089 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Flaveria trinervia RepID=RBS_FLATR Length = 173 Score = 123 bits (309), Expect = 6e-27 Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVAR-PARSSVRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA P + V P LK P K +N M V P K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLKANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKKK 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENASSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFI 166 [187][TOP] >UniRef100_Q9XGX5 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS2_AMAHP Length = 184 Score = 123 bits (309), Expect = 6e-27 Identities = 59/122 (48%), Positives = 76/122 (62%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF + + R Sbjct: 61 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELE------HPFVYRE 114 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S Y D RYWTMWKLPM+GC D QVL E+ + KA+P A++R++ FD +QVQ + Sbjct: 115 NHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVS 174 Query: 506 FL 511 F+ Sbjct: 175 FI 176 [188][TOP] >UniRef100_Q9XQB5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vigna radiata var. radiata RepID=Q9XQB5_PHAAU Length = 181 Score = 123 bits (308), Expect = 8e-27 Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 1/123 (0%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDK-AYASNESIIR 322 M V K FET SYLP L++EQ+ +VDY++ +GWIPCLEF S K A+ E+ Sbjct: 57 MQVWPTIGKKKFETLSYLPDLTEEQLGKEVDYLLRSGWIPCLEFELSHKDAFPHRENNRS 116 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 G YYD RYWTMWKLPM+GC D QVL+E+ + +PD +VR+V FD +QVQ + Sbjct: 117 PG-----YYDGRYWTMWKLPMYGCTDSSQVLKELREARTLYPDGFVRIVGFDSVRQVQCI 171 Query: 503 VFL 511 F+ Sbjct: 172 SFI 174 [189][TOP] >UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY9_9POAL Length = 168 Score = 123 bits (308), Expect = 8e-27 Identities = 63/164 (38%), Positives = 93/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + A + + M V K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ + + S YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVGFIFREHGSTPG-------YYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [190][TOP] >UniRef100_Q9SAX5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9SAX5_AEGSP Length = 165 Score = 123 bits (308), Expect = 8e-27 Identities = 65/164 (39%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [191][TOP] >UniRef100_Q2QTJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTJ7_ORYSJ Length = 175 Score = 123 bits (308), Expect = 8e-27 Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSY 196 V+A S+ S A + +S+ P++ + + + + M V K FET SY Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFETLSY 64 Query: 197 LPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWK 376 LPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD RYWTMWK Sbjct: 65 LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWK 117 Query: 377 LPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 LPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 118 LPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 162 [192][TOP] >UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Trifolium repens RepID=RBS_TRIRP Length = 178 Score = 123 bits (308), Expect = 8e-27 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 11/176 (6%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALK-----PAVKAAPE-----GDPAQANQMMVCTP 163 A+I+ ++V+ P ++++ P LK P K + + ++ N M V P Sbjct: 2 ALISSAAVTTINRAPVQANLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPP 61 Query: 164 FNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCL 343 K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF +K + + G Sbjct: 62 VGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFEL-EKGFVHRQYNSSPG----- 115 Query: 344 YYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMW+LP+FG D QVL+E+ +C +P+A++R++ FD +QVQ + F+ Sbjct: 116 YYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171 [193][TOP] >UniRef100_P08474 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Cucumis sativus RepID=RBS_CUCSA Length = 189 Score = 123 bits (308), Expect = 8e-27 Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 15/182 (8%) Frame = +2 Query: 11 LAAVIAKSSVSAAV--ARPARSS-VRPMAALKPAVK-----------AAPEGDPAQANQM 148 +A+ I S+ A+V A PA++S V P LK + + + M Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60 Query: 149 MVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEF-AASDKAYASNESIIRF 325 V P + FET SYLP +S+EQ+ + DY++ NGW+PC+EF S Y N Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHR---- 116 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S +YD RYWTMWKLPMFGC D QV++EI + K +PDA++R++ FD +QVQ + Sbjct: 117 ---SPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCIS 173 Query: 506 FL 511 F+ Sbjct: 174 FI 175 [194][TOP] >UniRef100_Q39748 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS6_FLAPR Length = 173 Score = 123 bits (308), Expect = 8e-27 Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Frame = +2 Query: 32 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPEGDPAQANQ-----MMVCTPFNNKM 178 +S+ A VA A+++ V P LK P K + +N M V P K Sbjct: 2 ASIPATVAAVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKK 61 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 + T SYLP L++ Q+ +VDY++ N W+PCLEF + + R + S YYD R Sbjct: 62 YXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELE------HGFVYRENARSPGYYDGR 115 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPMFGC D +QV++E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 116 YWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 166 [195][TOP] >UniRef100_O24634 Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS1_FRIAG Length = 179 Score = 123 bits (308), Expect = 8e-27 Identities = 69/178 (38%), Positives = 94/178 (52%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPEGDPA-----------QANQMMVC 157 ++ + S +AA A PA++S V P LK PA + M V Sbjct: 4 SSTMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 K FET SYLP LS E + Q++Y++ NGW+PCLEF+ N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNK-------S 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E +C K +P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174 [196][TOP] >UniRef100_Q9ZWG6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9ZWG6_HORVU Length = 165 Score = 122 bits (307), Expect = 1e-26 Identities = 64/164 (39%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPL+ E + QVDY++ + W+PCLEF+ + + S S YYD RYWTMWKL Sbjct: 61 PPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFI 157 [197][TOP] >UniRef100_Q9SAX1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops bicornis RepID=Q9SAX1_AEGBI Length = 164 Score = 122 bits (307), Expect = 1e-26 Identities = 58/113 (51%), Positives = 75/113 (66%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 +RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 SRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [198][TOP] >UniRef100_Q9AUJ3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ3_FLAPA Length = 131 Score = 122 bits (307), Expect = 1e-26 Identities = 55/122 (45%), Positives = 78/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEFELE------HGFVYRE 62 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + Sbjct: 63 NASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVS 122 Query: 506 FL 511 F+ Sbjct: 123 FI 124 [199][TOP] >UniRef100_Q9AQX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AQX3_FLAPA Length = 131 Score = 122 bits (307), Expect = 1e-26 Identities = 55/122 (45%), Positives = 78/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEFELE------HGFVYRE 62 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + Sbjct: 63 NASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVS 122 Query: 506 FL 511 F+ Sbjct: 123 FI 124 [200][TOP] >UniRef100_Q36688 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa RepID=Q36688_ORYSA Length = 169 Score = 122 bits (307), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 51 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHK-------SPGYYD 103 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 104 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 156 [201][TOP] >UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS3B_ARATH Length = 181 Score = 122 bits (307), Expect = 1e-26 Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALKPAVK-----------AAPEGDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK + + + + + M V P K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP LSD ++ +VDY++ N WIPC+EF + + R + YYD R Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE------HGFVYREHGNTPGYYDGR 120 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171 [202][TOP] >UniRef100_O22572 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS2_FRIAG Length = 179 Score = 122 bits (307), Expect = 1e-26 Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEG------DPAQANQMMVC 157 +A + S +AA PA++S V P LK P + G + + M V Sbjct: 4 SATMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVW 63 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 K FET SYLP LS E + Q++Y++ NGW+PCLEF+ N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNK-------S 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC D QV++E +C K +P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174 [203][TOP] >UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS1B_ARATH Length = 181 Score = 122 bits (307), Expect = 1e-26 Identities = 66/171 (38%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK P + A + + + M V P K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP L+D ++ +VDY++ N WIPC+EF + + R + YYD R Sbjct: 67 FETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELE------HGFVYREHGNTPGYYDGR 120 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171 [204][TOP] >UniRef100_Q9ZWG7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Secale cereale RepID=Q9ZWG7_SECCE Length = 165 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [205][TOP] >UniRef100_Q9ZRS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale cereale RepID=Q9ZRS6_SECCE Length = 175 Score = 122 bits (306), Expect = 1e-26 Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 1/166 (0%) Frame = +2 Query: 17 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 AV+A S+ + A + +S+ P+ + + + + M V K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVGRRSGSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLPPLS E + QVDY++ + W+PCLEF+ + + + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNN-------SPGYYDGRYWTMW 116 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFI 162 [206][TOP] >UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY8_9POAL Length = 168 Score = 122 bits (306), Expect = 1e-26 Identities = 63/164 (38%), Positives = 93/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + A + + M V K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ + + S YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVGFIFREHGSTPG-------YYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [207][TOP] >UniRef100_Q9SAX6 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Triticeae RepID=Q9SAX6_WHEAT Length = 165 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [208][TOP] >UniRef100_Q9SAW9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops tauschii RepID=Q9SAW9_AEGTA Length = 165 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGIVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [209][TOP] >UniRef100_Q9SAW8 Ribulose bisphosphate carboxylase small chain (Fragment) n=7 Tax=Triticeae RepID=Q9SAW8_TRITI Length = 165 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [210][TOP] >UniRef100_Q9SAW7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum turgidum subsp. dicoccoides RepID=Q9SAW7_TRITU Length = 165 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [211][TOP] >UniRef100_Q575T3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum turgidum subsp. durum RepID=Q575T3_TRITU Length = 170 Score = 122 bits (306), Expect = 1e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [212][TOP] >UniRef100_Q2QTK0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTK0_ORYSJ Length = 128 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 10 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 62 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 63 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 115 [213][TOP] >UniRef100_A6N149 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N149_ORYSI Length = 157 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 39 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 91 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 92 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 144 [214][TOP] >UniRef100_Q2QTJ1 Ribulose bisphosphate carboxylase small chain n=2 Tax=Oryza sativa RepID=Q2QTJ1_ORYSJ Length = 175 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 57 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 109 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 110 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 162 [215][TOP] >UniRef100_A2ZJQ0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa Indica Group RepID=A2ZJQ0_ORYSI Length = 175 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 57 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 109 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 110 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 162 [216][TOP] >UniRef100_P18566 Ribulose bisphosphate carboxylase small chain A, chloroplastic n=3 Tax=Oryza sativa RepID=RBS2_ORYSJ Length = 175 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 57 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 109 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 110 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 162 [217][TOP] >UniRef100_Q0INY7 Ribulose bisphosphate carboxylase small chain, chloroplastic n=3 Tax=Oryza sativa RepID=RBS1_ORYSJ Length = 175 Score = 122 bits (306), Expect = 1e-26 Identities = 56/113 (49%), Positives = 76/113 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 57 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 109 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL+E+ + KA+PDA+VR++ FD +QVQ++ F+ Sbjct: 110 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFI 162 [218][TOP] >UniRef100_Q9ZWG9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum timopheevii subsp. armeniacum RepID=Q9ZWG9_TRITI Length = 165 Score = 122 bits (305), Expect = 2e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [219][TOP] >UniRef100_Q9SAX7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9SAX7_AEGSP Length = 165 Score = 122 bits (305), Expect = 2e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [220][TOP] >UniRef100_Q9SAX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Aegilops speltoides RepID=Q9SAX3_AEGSP Length = 165 Score = 122 bits (305), Expect = 2e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [221][TOP] >UniRef100_Q9S800 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9S800_AEGSP Length = 165 Score = 122 bits (305), Expect = 2e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [222][TOP] >UniRef100_Q9FRZ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ3_WHEAT Length = 173 Score = 122 bits (305), Expect = 2e-26 Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 9/167 (5%) Frame = +2 Query: 38 VSAAVARPARSSVRPMAALK-----PAVKAAPEGDPAQANQMMVCT---PFNN-KMFETF 190 ++ AV + ++V P LK P + + E P + C P K FET Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSEPRPRHNGGRIRCMQVWPIEGIKKFETL 60 Query: 191 SYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTM 370 SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD RYWTM Sbjct: 61 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTM 113 Query: 371 WKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 WKLPMFGC D QVL E+ + K +PDAYVR+ FD +QVQ + F+ Sbjct: 114 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVNGFDNLRQVQCVSFI 160 [223][TOP] >UniRef100_Q9AUJ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ5_FLARA Length = 131 Score = 122 bits (305), Expect = 2e-26 Identities = 55/122 (45%), Positives = 78/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K +ET SYLP L++ Q+ +VDY++ N W+PCLEF + + R Sbjct: 9 MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEFELE------HGFVYRE 62 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + Sbjct: 63 NARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCIS 122 Query: 506 FL 511 F+ Sbjct: 123 FI 124 [224][TOP] >UniRef100_Q84NG5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG5_FLABI Length = 173 Score = 122 bits (305), Expect = 2e-26 Identities = 54/122 (44%), Positives = 78/122 (63%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K +ET SYLP L++ Q+ ++DY++ N W+PCLEF + + R Sbjct: 51 MKVWPPVGKKKYETLSYLPELTEAQLAKEIDYLIRNKWVPCLEFELE------HGFVYRE 104 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 + S YYD RYWTMWKLPMFGC D QV++E+ +C K +P A++R++ FD +QVQ + Sbjct: 105 NARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVS 164 Query: 506 FL 511 F+ Sbjct: 165 FI 166 [225][TOP] >UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pyrus pyrifolia RepID=RBS_PYRPY Length = 183 Score = 122 bits (305), Expect = 2e-26 Identities = 57/122 (46%), Positives = 75/122 (61%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FET SYLPPLS E + +VDY++ W+PCLEF + R Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELE------TGFVYRE 114 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL+E+ + KA+P +++R++ FD +QVQ + Sbjct: 115 NHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCIS 174 Query: 506 FL 511 F+ Sbjct: 175 FI 176 [226][TOP] >UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Malus sp. RepID=RBS_MALSP Length = 183 Score = 122 bits (305), Expect = 2e-26 Identities = 57/122 (46%), Positives = 76/122 (62%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M V P K FET SYLPPLS E + +VDY++ W+PCLEF + + R Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELE------HGFVYRE 114 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QVL+E+ + KA+P +++R++ FD +QVQ + Sbjct: 115 NHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCIS 174 Query: 506 FL 511 F+ Sbjct: 175 FI 176 [227][TOP] >UniRef100_O22645 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS5_FRIAG Length = 179 Score = 122 bits (305), Expect = 2e-26 Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPEG------DPAQANQMMVC 157 +A + S +AA A PA++S V P LK P + G + + M V Sbjct: 4 SATMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKTATGLSTLPSNGGRVQCMKVW 63 Query: 158 TPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVS 337 K FET SYLP LS E + Q++Y++ NGW+PCLEF+ N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNK-------S 116 Query: 338 CLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YYD RYWTMWKLPMFGC QV++E +C K +P A++R++ FD +QVQ + F+ Sbjct: 117 PGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174 [228][TOP] >UniRef100_Q9ZWH4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9ZWH4_AEGSP Length = 165 Score = 121 bits (304), Expect = 2e-26 Identities = 58/112 (51%), Positives = 73/112 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVF 508 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSF 156 [229][TOP] >UniRef100_Q9ZWG3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum urartu RepID=Q9ZWG3_9POAL Length = 165 Score = 121 bits (304), Expect = 2e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [230][TOP] >UniRef100_Q9ZRS5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale cereale RepID=Q9ZRS5_SECCE Length = 175 Score = 121 bits (304), Expect = 2e-26 Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSY 196 V+A S+ S A + +S+ P++ + + M V K FET SY Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 64 Query: 197 LPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWK 376 LPPL+ E + QVDY++ + W+PCLEF+ I R + S YYD RYWTMWK Sbjct: 65 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVG-------FIFREHNASPGYYDGRYWTMWK 117 Query: 377 LPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 LPMFGC D QV+ E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 118 LPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFI 162 [231][TOP] >UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q306K0_BRANA Length = 181 Score = 121 bits (304), Expect = 2e-26 Identities = 60/161 (37%), Positives = 93/161 (57%) Frame = +2 Query: 29 KSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPL 208 KSS + V R A + + +A+ + + + M V P K FET SYLP L Sbjct: 28 KSSAAFPVTRKANNDITSIAS-----------NGGRVSCMKVWPPVGKKKFETLSYLPDL 76 Query: 209 SDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMF 388 ++ ++ +VDY++ N WIPC+EF + + R + YYD RYWTMWKLP+F Sbjct: 77 TEVELGKEVDYLLRNKWIPCVEFELE------HGFVYREHGSTPGYYDGRYWTMWKLPLF 130 Query: 389 GCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 GC D QVL+E+ +C +P+A++R++ FD ++QVQ + F+ Sbjct: 131 GCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFI 171 [232][TOP] >UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=Q2V327_ARATH Length = 174 Score = 121 bits (304), Expect = 2e-26 Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALKPAVK-----------AAPEGDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK + + + + + M V P K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP LSD ++ +VDY++ N WIPC+EF + G+ YYD R Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFE------------LEHGNTPG-YYDGR 113 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C K +P A++R++ FD +QVQ + F+ Sbjct: 114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 164 [233][TOP] >UniRef100_O22487 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa RepID=O22487_ORYSA Length = 175 Score = 121 bits (304), Expect = 2e-26 Identities = 56/110 (50%), Positives = 74/110 (67%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPL+ E + Q++Y++ + W+PCLEF+ Y N S YYD Sbjct: 57 KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYD 109 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 RYWTMWKLPMFGC D QVL+E+ D KA+PDA+VR++ FD +QVQ++ Sbjct: 110 GRYWTMWKLPMFGCTDATQVLKELEDAKKAYPDAFVRIIGFDNVRQVQLI 159 [234][TOP] >UniRef100_A7YVW6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia chinensis RepID=A7YVW6_ACTCH Length = 176 Score = 121 bits (304), Expect = 2e-26 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 5/171 (2%) Frame = +2 Query: 14 AAVIAKSSVS----AAVARPARSSVRPMA-ALKPAVKAAPEGDPAQANQMMVCTPFNNKM 178 A+ I+ S+V+ A++A P P A +L +++ + M V P K Sbjct: 3 ASTISSSAVTSVTRASLASPFAGVKSPSAISLGRKLESGSRSSGFKVKCMQVWPPLGKKK 62 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLPPL +E + Q+DY++ GWIPC+EF+ + + R S YYD R Sbjct: 63 FETLSYLPPLPEEALLKQIDYLIRMGWIPCIEFSVGEGF------VYREHHHSPGYYDGR 116 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLPM+GC D QV E+ K +PD+++R++ FD +QVQ + F+ Sbjct: 117 YWTMWKLPMYGCTDSTQVRAEVEANKKEYPDSFIRIIGFDNKRQVQCVSFI 167 [235][TOP] >UniRef100_O22077 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Fagus crenata RepID=RBS_FAGCR Length = 182 Score = 121 bits (304), Expect = 2e-26 Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 14/181 (7%) Frame = +2 Query: 11 LAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPEGDPAQANQ------M 148 +A+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60 Query: 149 MVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFG 328 V P + FET SYLPPLS E + Q++Y++ GWIPCLEF + + R Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELE------HPFVYREN 114 Query: 329 SVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVF 508 + S YYD RYW MWKLPMFGC D QVL E+ + +K +P +++R++ FD +QVQ + F Sbjct: 115 NRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISF 174 Query: 509 L 511 + Sbjct: 175 I 175 [236][TOP] >UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1 Tax=Brassica napus RepID=RBS2_BRANA Length = 181 Score = 121 bits (304), Expect = 2e-26 Identities = 60/161 (37%), Positives = 93/161 (57%) Frame = +2 Query: 29 KSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYLPPL 208 KSS + V R A + + +A+ + + + M V P K FET SYLP L Sbjct: 28 KSSAAFPVTRKANNDITSIAS-----------NGGRVSCMKVWPPVGKKKFETLSYLPDL 76 Query: 209 SDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKLPMF 388 ++ ++ +VDY++ N WIPC+EF + + R + YYD RYWTMWKLP+F Sbjct: 77 TEVELGKEVDYLLRNKWIPCVEFELE------HGFVYREHGSTPGYYDGRYWTMWKLPLF 130 Query: 389 GCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 GC D QVL+E+ +C +P+A++R++ FD ++QVQ + F+ Sbjct: 131 GCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFI 171 [237][TOP] >UniRef100_Q9ZWG2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Bromus catharticus RepID=Q9ZWG2_BROCA Length = 164 Score = 121 bits (303), Expect = 3e-26 Identities = 56/113 (49%), Positives = 75/113 (66%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + Q+DY++ + W+PCLEF+ + R + S YYD Sbjct: 51 KKFETLSYLPPLSTEALLKQIDYLIRSKWVPCLEFSKVG-------FVFREHNASPGYYD 103 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 104 GRYWTMWKLPMFGCTDASQVIKELEEVKKEYPDAYVRIIGFDNLRQVQCVSFI 156 [238][TOP] >UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9TLH3_MANES Length = 184 Score = 121 bits (303), Expect = 3e-26 Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDK-AYASNESIIR 322 M V K FET SYLPPLS EQ+ +++DY++ +GWIPCLEF Y ++ S+ Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPG 119 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 YYD RYWTMWKLPMFGC D QVL+E+ + KA PD + R++ FD +QVQ + Sbjct: 120 -------YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQCI 172 Query: 503 VFL 511 F+ Sbjct: 173 SFI 175 [239][TOP] >UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9T4H0_MANES Length = 184 Score = 121 bits (303), Expect = 3e-26 Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Frame = +2 Query: 146 MMVCTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDK-AYASNESIIR 322 M V K FET SYLPPLS EQ+ +++DY++ +GWIPCLEF Y ++ S+ Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPG 119 Query: 323 FGSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIM 502 YYD RYWTMWKLPMFGC D QVL+E+ + KA PD + R++ FD +QVQ + Sbjct: 120 -------YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQCI 172 Query: 503 VFL 511 F+ Sbjct: 173 SFI 175 [240][TOP] >UniRef100_Q9SNZ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena maroccana RepID=Q9SNZ6_9POAL Length = 168 Score = 121 bits (303), Expect = 3e-26 Identities = 63/164 (38%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + + + M V K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ + + S YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVGFIFREHGSTPG-------YYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV+RE+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIREVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [241][TOP] >UniRef100_Q9SAW6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum aestivum RepID=Q9SAW6_WHEAT Length = 165 Score = 121 bits (303), Expect = 3e-26 Identities = 58/113 (51%), Positives = 74/113 (65%) Frame = +2 Query: 173 KMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYD 352 K FET SYLPPLS E + QVDY++ + W+PCLEF+ + + S S YYD Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYD 104 Query: 353 NRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 RYWTMWKLPMFGC D QVL E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 105 GRYWTMWKLPMFGCTDATQVLIEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFI 157 [242][TOP] >UniRef100_Q5ZF94 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF94_PLAMJ Length = 174 Score = 121 bits (303), Expect = 3e-26 Identities = 65/166 (39%), Positives = 94/166 (56%) Frame = +2 Query: 14 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFS 193 A V A++S+ + S P+A V + G + M V P K +ET S Sbjct: 10 ATVTAQTSMVGQFSGLKFGSTFPIAKKTGRVSSPSSG--LKVRCMQVWPPTGKKKYETLS 67 Query: 194 YLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMW 373 YLP L+ EQ+ ++DY++ + WIPCLEF + + R + S YYD RYWTMW Sbjct: 68 YLPDLTVEQLAKEIDYLLRSKWIPCLEFELE------HGFVYRENARSPGYYDGRYWTMW 121 Query: 374 KLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 KLPMFGC D QV+ E+ +C K +P+A+VR++ FD +QVQ + F+ Sbjct: 122 KLPMFGCTDASQVIAELEECKKEYPNAWVRIIGFDNVRQVQCISFI 167 [243][TOP] >UniRef100_Q106Z3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z3_MUSAC Length = 181 Score = 121 bits (303), Expect = 3e-26 Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 15/182 (8%) Frame = +2 Query: 11 LAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPEGDPAQAN-----------QM 148 +A+ + SS +A V+R PA+SS V P LK + A P A A+ Q Sbjct: 1 MASSVMVSSAAAVVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQC 59 Query: 149 MVCTPFNNKM-FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRF 325 M P K FET SYLP L DE + Q++Y++ + WIPCLEF+ + N Sbjct: 60 MKVWPIEGKKKFETLSYLPTLVDEVLLKQIEYLLRSKWIPCLEFSHEGFVWRENHR---- 115 Query: 326 GSVSCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMV 505 S YYD RYWTMWKLPMFGC D QV +E+ +C K +P A+V ++ FD ++QVQ + Sbjct: 116 ---SPGYYDGRYWTMWKLPMFGCTDATQVAKELEECKKEYPRAFVGIIGFDNNRQVQCIS 172 Query: 506 FL 511 F+ Sbjct: 173 FI 174 [244][TOP] >UniRef100_A9XP21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Sonneratia apetala RepID=A9XP21_9MYRT Length = 178 Score = 121 bits (303), Expect = 3e-26 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 15/175 (8%) Frame = +2 Query: 32 SSVSAAVAR--PARSS-VRPMAALKPA------------VKAAPEGDPAQANQMMVCTPF 166 SS + AV R PA++S V P LK + A G Q M V P Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQC--MQVWPPE 59 Query: 167 NNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLY 346 K FET SYLP LS EQ+ +++Y++ NGW PCLEF+ AY E+ G Y Sbjct: 60 GLKKFETLSYLPDLSREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----Y 114 Query: 347 YDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YD RYWTMWKLPMFGC D +QV++E+ + KA+P + R+ F +QVQ + F+ Sbjct: 115 YDGRYWTMWKLPMFGCTDPIQVIKELDEGIKAYPTYFFRIAGFSARRQVQCISFI 169 [245][TOP] >UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Glycine max RepID=RBS1_SOYBN Length = 178 Score = 121 bits (303), Expect = 3e-26 Identities = 69/179 (38%), Positives = 92/179 (51%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKA-------APEGDPAQANQMMV 154 +A+ + S V R V P LK P K A G Q M V Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQC--MQV 58 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP L D Q+ +V+Y++ GWIPCLEF + + R + Sbjct: 59 WPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELE------HGFVYREHNR 112 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL+E+ + A+P+ ++R++ FD +QVQ + F+ Sbjct: 113 SPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFI 171 [246][TOP] >UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Brassica napus RepID=RBS1_BRANA Length = 181 Score = 121 bits (303), Expect = 3e-26 Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 12/171 (7%) Frame = +2 Query: 35 SVSAAVARPARSS-VRPMAALK-----PAVKAAPE------GDPAQANQMMVCTPFNNKM 178 S +A V PA+++ V P LK P + A + + + M V P K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKK 66 Query: 179 FETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNR 358 FET SYLP L++ ++ +VDY++ N WIPC+EF + + R + YYD R Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELE------HGFVYREHGSTPGYYDGR 120 Query: 359 YWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 YWTMWKLP+FGC D QVL+E+ +C +P+A++R++ FD ++QVQ + F+ Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFI 171 [247][TOP] >UniRef100_Q9ZSS0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9ZSS0_9POAL Length = 168 Score = 120 bits (302), Expect = 4e-26 Identities = 61/164 (37%), Positives = 93/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + + + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ + + S YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVGFIFREHGSTPG-------YYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [248][TOP] >UniRef100_Q9SNZ8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SNZ8_9POAL Length = 168 Score = 120 bits (302), Expect = 4e-26 Identities = 62/164 (37%), Positives = 93/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ + A + +S+ + + A + + M V K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSASSLGNVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ + + S YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVGFIFREHGSTPG-------YYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [249][TOP] >UniRef100_Q9SNW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SNW4_9POAL Length = 168 Score = 120 bits (302), Expect = 4e-26 Identities = 63/164 (38%), Positives = 92/164 (56%) Frame = +2 Query: 20 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPEGDPAQANQMMVCTPFNNKMFETFSYL 199 V+A S+ S A + +S+ + + + + M V K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLAVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 200 PPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSVSCLYYDNRYWTMWKL 379 PPLS+E + Q+D+++ + W+PCLEF+ I R + YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEFSKVG-------FIFRVHGSTPGYYDGRYWTMWKL 113 Query: 380 PMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 PMFGC D QV++E+ + K +PDAYVR++ FD +QVQ + F+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQVQCVSFI 157 [250][TOP] >UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ5_SOYBN Length = 178 Score = 120 bits (302), Expect = 4e-26 Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 12/179 (6%) Frame = +2 Query: 11 LAAVIAKSSVSAAVARPARSSVRPMAALKP------------AVKAAPEGDPAQANQMMV 154 +A+ + S V R V P LK + A G Q M V Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDTISIASNGGRVQC--MQV 58 Query: 155 CTPFNNKMFETFSYLPPLSDEQIDAQVDYIVANGWIPCLEFAASDKAYASNESIIRFGSV 334 P K FET SYLP L D Q+ +V+Y++ GWIPCLEF + + R + Sbjct: 59 WPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELE------HGFVYREHNR 112 Query: 335 SCLYYDNRYWTMWKLPMFGCRDHMQVLREIVDCTKAFPDAYVRLVAFDIHKQVQIMVFL 511 S YYD RYWTMWKLPMFGC D QVL+E+ + A+P+ ++R++ FD +QVQ + F+ Sbjct: 113 SPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFI 171