AV624944 ( LC084h04_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV624944  LC084h04_r
         (455 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_O64985 Poly(A) binding protein RB47 n=1 Tax=Chlamydomo...    87   6e-16
UniRef100_A8HME6 Polyadenylate-binding protein RB47 n=1 Tax=Chla...    87   6e-16
UniRef100_UPI000194C017 PREDICTED: poly(A) binding protein, cyto...    56   1e-06
UniRef100_UPI0000ECD120 UPI0000ECD120 related cluster n=1 Tax=Ga...    56   1e-06
UniRef100_Q5ZL53 Putative uncharacterized protein n=1 Tax=Gallus...    56   1e-06
UniRef100_Q2VIN8 PABP3 (Fragment) n=1 Tax=Chlorocebus sabaeus Re...    55   2e-06
UniRef100_UPI0000E23543 PREDICTED: similar to PABP3 isoform 4 n=...    55   2e-06
UniRef100_UPI0000E23542 PREDICTED: similar to polyadenylate bind...    55   2e-06
UniRef100_UPI0000E23541 PREDICTED: similar to PABP3 isoform 2 n=...    55   2e-06
UniRef100_UPI0000E23540 PREDICTED: similar to PABP3 isoform 3 n=...    55   2e-06
UniRef100_Q2VIP2 PABP3 (Fragment) n=2 Tax=Pan troglodytes RepID=...    55   2e-06
UniRef100_Q3ZCS4 Poly(A) binding protein, cytoplasmic 3 n=1 Tax=...    55   2e-06
UniRef100_Q9H361 Polyadenylate-binding protein 3 n=3 Tax=Homo sa...    55   2e-06
UniRef100_UPI00017968F3 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI000155CC05 PREDICTED: similar to poly(A) binding pr...    55   3e-06
UniRef100_UPI0000D9CEBF PREDICTED: poly(A) binding protein, cyto...    55   3e-06
UniRef100_UPI00005A28F5 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28F4 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28F3 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28F2 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28F1 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28EF PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28EE PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28ED PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28EC PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28EB PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28EA PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E8 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E7 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E6 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E5 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E4 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E3 PREDICTED: similar to poly A binding pro...    55   3e-06
UniRef100_UPI00005A28E2 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI00005A28E0 PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_UPI000048135A PREDICTED: similar to Polyadenylate-bind...    55   3e-06
UniRef100_Q6DF12 Polyadenylate-binding protein 1 n=1 Tax=Xenopus...    55   3e-06
UniRef100_Q5R8L7 Putative uncharacterized protein DKFZp468C038 n...    55   3e-06
UniRef100_Q2VIP0 PABP3 (Fragment) n=1 Tax=Pongo pygmaeus RepID=Q...    55   3e-06
UniRef100_Q2VIN7 PABP3 (Fragment) n=1 Tax=Aotus trivirgatus RepI...    55   3e-06
UniRef100_B4DZW4 cDNA FLJ57246, highly similar to Poly(A)-bindin...    55   3e-06
UniRef100_B4DQX0 cDNA FLJ59219, highly similar to Poly(A)-bindin...    55   3e-06
UniRef100_B3KT93 cDNA FLJ37875 fis, clone BRSSN2018771, highly s...    55   3e-06
UniRef100_Q5R8F7 Polyadenylate-binding protein 1 n=1 Tax=Pongo a...    55   3e-06
UniRef100_P11940-2 Isoform 2 of Polyadenylate-binding protein 1 ...    55   3e-06
UniRef100_P11940 Polyadenylate-binding protein 1 n=2 Tax=Eutheri...    55   3e-06
UniRef100_Q7T3G5 Poly(A) binding protein, cytoplasmic 4 (Inducib...    54   4e-06
UniRef100_Q3SAZ2 PolyA binding protein (Fragment) n=1 Tax=Oxyura...    54   4e-06
UniRef100_Q862M1 Similar to poly(A)-binding protein 1 (Fragment)...    54   4e-06
UniRef100_Q2VIP1 PABP3 (Fragment) n=1 Tax=Gorilla gorilla RepID=...    54   4e-06
UniRef100_UPI0000EB0FB6 Polyadenylate-binding protein 1-like. n=...    54   5e-06
UniRef100_UPI0000D9E614 PREDICTED: poly(A) binding protein, cyto...    54   7e-06
UniRef100_UPI0000D9E613 PREDICTED: poly(A) binding protein, cyto...    54   7e-06
UniRef100_Q6IP09 Polyadenylate-binding protein 1-B n=1 Tax=Xenop...    54   7e-06
UniRef100_P20965 Polyadenylate-binding protein 1-A n=1 Tax=Xenop...    54   7e-06
UniRef100_UPI0000D8FF65 PREDICTED: similar to poly(A) binding pr...    53   9e-06
UniRef100_UPI00006A0491 MGC89376 protein. n=1 Tax=Xenopus (Silur...    53   9e-06
UniRef100_UPI00017B2F35 UPI00017B2F35 related cluster n=1 Tax=Te...    53   9e-06
UniRef100_UPI00017B2F34 UPI00017B2F34 related cluster n=1 Tax=Te...    53   9e-06
UniRef100_UPI00016E84BA UPI00016E84BA related cluster n=1 Tax=Ta...    53   9e-06
UniRef100_UPI00016E84B9 UPI00016E84B9 related cluster n=1 Tax=Ta...    53   9e-06
UniRef100_UPI00016E84B8 UPI00016E84B8 related cluster n=1 Tax=Ta...    53   9e-06
UniRef100_Q8QGJ7 PolyA-binding protein n=1 Tax=Takifugu rubripes...    53   9e-06
UniRef100_Q4RNX8 Chromosome 10 SCAF15009, whole genome shotgun s...    53   9e-06
UniRef100_Q99L36 Poly(A) binding protein, cytoplasmic 1 n=1 Tax=...    53   9e-06
UniRef100_Q99KL3 Pabpc1 protein (Fragment) n=1 Tax=Mus musculus ...    53   9e-06
UniRef100_Q8BN32 Putative uncharacterized protein n=1 Tax=Mus mu...    53   9e-06
UniRef100_Q3U8U8 Putative uncharacterized protein n=1 Tax=Mus mu...    53   9e-06
UniRef100_Q2VIN9 PABP3 (Fragment) n=1 Tax=Hylobates lar RepID=Q2...    53   9e-06
UniRef100_Q9EPH8 Polyadenylate-binding protein 1 n=1 Tax=Rattus ...    53   9e-06
UniRef100_P29341 Polyadenylate-binding protein 1 n=1 Tax=Mus mus...    53   9e-06
UniRef100_Q6DEY7 Embryonic polyadenylate-binding protein n=1 Tax...    53   9e-06
UniRef100_Q98SP8 Embryonic polyadenylate-binding protein A n=1 T...    53   9e-06
graphical overview:
alignment
UniRef100_O64985 UniRef100_O64985 UniRef100_A8HME6 UniRef100_A8HME6 UniRef100_UPI000194C017 UniRef100_UPI000194C017 UniRef100_UPI0000ECD120 UniRef100_UPI0000ECD120 UniRef100_Q5ZL53 UniRef100_Q5ZL53 UniRef100_Q2VIN8 UniRef100_Q2VIN8 UniRef100_UPI0000E23543 UniRef100_UPI0000E23543 UniRef100_UPI0000E23542 UniRef100_UPI0000E23542 UniRef100_UPI0000E23541 UniRef100_UPI0000E23541 UniRef100_UPI0000E23540 UniRef100_UPI0000E23540 UniRef100_Q2VIP2 UniRef100_Q2VIP2 UniRef100_Q3ZCS4 UniRef100_Q3ZCS4 UniRef100_Q9H361 UniRef100_Q9H361 UniRef100_UPI00017968F3 UniRef100_UPI00017968F3 UniRef100_UPI000155CC05 UniRef100_UPI000155CC05 UniRef100_UPI0000D9CEBF UniRef100_UPI0000D9CEBF UniRef100_UPI00005A28F5 UniRef100_UPI00005A28F5 UniRef100_UPI00005A28F4 UniRef100_UPI00005A28F4 UniRef100_UPI00005A28F3 UniRef100_UPI00005A28F3 UniRef100_UPI00005A28F2 UniRef100_UPI00005A28F2 UniRef100_UPI00005A28F1 UniRef100_UPI00005A28F1 UniRef100_UPI00005A28EF UniRef100_UPI00005A28EF UniRef100_UPI00005A28EE UniRef100_UPI00005A28EE UniRef100_UPI00005A28ED UniRef100_UPI00005A28ED UniRef100_UPI00005A28EC UniRef100_UPI00005A28EC UniRef100_UPI00005A28EB UniRef100_UPI00005A28EB UniRef100_UPI00005A28EA UniRef100_UPI00005A28EA UniRef100_UPI00005A28E8 UniRef100_UPI00005A28E8 UniRef100_UPI00005A28E7 UniRef100_UPI00005A28E7 UniRef100_UPI00005A28E6 UniRef100_UPI00005A28E6 UniRef100_UPI00005A28E5 UniRef100_UPI00005A28E5 UniRef100_UPI00005A28E4 UniRef100_UPI00005A28E4 UniRef100_UPI00005A28E3 UniRef100_UPI00005A28E3 UniRef100_UPI00005A28E2 UniRef100_UPI00005A28E2 UniRef100_UPI00005A28E0 UniRef100_UPI00005A28E0 UniRef100_UPI000048135A UniRef100_UPI000048135A UniRef100_Q6DF12 UniRef100_Q6DF12 UniRef100_Q5R8L7 UniRef100_Q5R8L7 UniRef100_Q2VIP0 UniRef100_Q2VIP0 UniRef100_Q2VIN7 UniRef100_Q2VIN7 UniRef100_B4DZW4 UniRef100_B4DZW4 UniRef100_B4DQX0 UniRef100_B4DQX0 UniRef100_B3KT93 UniRef100_B3KT93 UniRef100_Q5R8F7 UniRef100_Q5R8F7 UniRef100_P11940-2 UniRef100_P11940-2 UniRef100_P11940 UniRef100_P11940 UniRef100_Q7T3G5 UniRef100_Q7T3G5 UniRef100_Q3SAZ2 UniRef100_Q3SAZ2 UniRef100_Q862M1 UniRef100_Q862M1 UniRef100_Q2VIP1 UniRef100_Q2VIP1 UniRef100_UPI0000EB0FB6 UniRef100_UPI0000EB0FB6 UniRef100_UPI0000D9E614 UniRef100_UPI0000D9E614 UniRef100_UPI0000D9E613 UniRef100_UPI0000D9E613 UniRef100_Q6IP09 UniRef100_Q6IP09 UniRef100_P20965 UniRef100_P20965 UniRef100_UPI0000D8FF65 UniRef100_UPI0000D8FF65 UniRef100_UPI00006A0491 UniRef100_UPI00006A0491 UniRef100_UPI00017B2F35 UniRef100_UPI00017B2F35 UniRef100_UPI00017B2F34 UniRef100_UPI00017B2F34 UniRef100_UPI00016E84BA UniRef100_UPI00016E84BA UniRef100_UPI00016E84B9 UniRef100_UPI00016E84B9 UniRef100_UPI00016E84B8 UniRef100_UPI00016E84B8 UniRef100_Q8QGJ7 UniRef100_Q8QGJ7 UniRef100_Q4RNX8 UniRef100_Q4RNX8 UniRef100_Q99L36 UniRef100_Q99L36 UniRef100_Q99KL3 UniRef100_Q99KL3 UniRef100_Q8BN32 UniRef100_Q8BN32 UniRef100_Q3U8U8 UniRef100_Q3U8U8 UniRef100_Q2VIN9 UniRef100_Q2VIN9 UniRef100_Q9EPH8 UniRef100_Q9EPH8 UniRef100_P29341 UniRef100_P29341 UniRef100_Q6DEY7 UniRef100_Q6DEY7