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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 265 bits (677), Expect = 1e-69
Identities = 143/143 (100%), Positives = 143/143 (100%)
Frame = +1
Query: 67 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 246
MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA
Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60
Query: 247 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 426
SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA
Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120
Query: 427 VPAAVGMGAAASLLFAQSAEAST 495
VPAAVGMGAAASLLFAQSAEAST
Sbjct: 121 VPAAVGMGAAASLLFAQSAEAST 143
Score = 141 bits (355), Expect = 3e-32
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189
Query: 421 RAVPAAVGMGAAASLLFAQSAEAST 495
RAVPAAVGMGAAASLLFAQSAEAST
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEAST 214
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260
[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 180 bits (456), Expect = 5e-44
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +1
Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390
VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60
Query: 391 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAST 495
QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAST
Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAST 95
Score = 141 bits (355), Expect = 3e-32
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141
Query: 421 RAVPAAVGMGAAASLLFAQSAEAST 495
RAVPAAVGMGAAASLLFAQSAEAST
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEAST 166
Score = 141 bits (355), Expect = 3e-32
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212
Query: 421 RAVPAAVGMGAAASLLFAQSAEAST 495
RAVPAAVGMGAAASLLFAQSAEAST
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEAST 237
Score = 141 bits (355), Expect = 3e-32
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283
Query: 421 RAVPAAVGMGAAASLLFAQSAEAST 495
RAVPAAVGMGAAASLLFAQSAEAST
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEAST 308
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354
[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 65.5 bits (158), Expect = 2e-09
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Frame = +1
Query: 40 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 219
++ +P L + R+S + R LPVR A V A A + ++G
Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62
Query: 220 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 396
A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q
Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122
Query: 397 NQMDAKN---KRAVPAAVGMGAAASLLFAQSAEAST 495
N M KN K+ +P +G+ AAA + A+A+T
Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAALAGMPEQADAAT 158
[4][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 62.4 bits (150), Expect = 2e-08
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +1
Query: 235 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 408
S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D
Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114
Query: 409 AKNKRAVPAAVGMGAAASLLFAQSAEAST 495
A K+ V A VG+ AAA + ++A+A+T
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAAT 143
[5][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390
V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ
Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58
Query: 391 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEAS 492
LNQ+D + +A+ A G+GAAA+L+ A A+A+
Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAA 93
[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 58.9 bits (141), Expect = 2e-07
Identities = 50/146 (34%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Frame = +1
Query: 61 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 240
V + ALR S A R R AK R A+ S V A+ E S+
Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 417
AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN
Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116
Query: 418 -KRAVPAAVGMGAAASLLFAQSAEAS 492
+ V A G+ AAA L ++++A+
Sbjct: 117 KSKGVLAGAGLSAAALLGMPEASDAA 142
[7][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 57.8 bits (138), Expect = 4e-07
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Frame = +1
Query: 208 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 387
K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 388 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEA 489
Q+N + N P A G+ AAA SLL A A+A
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADA 310
[8][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 57.0 bits (136), Expect = 6e-07
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +1
Query: 58 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 231
+ +A + + P RS+ S + +R R+ V A S G +A+
Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60
Query: 232 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 411
+ A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++
Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112
Query: 412 KNKRAVPAAVGMGAAASLLFAQSAEAS 492
+AV A +G+GAAA+ + A + EAS
Sbjct: 113 MRSQAVVAGLGLGAAAAGM-AAAPEAS 138
[9][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 56.6 bits (135), Expect = 8e-07
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +1
Query: 58 LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 231
+ MA L+ +A +A S S L VR +A + + AS G A L
Sbjct: 4 IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57
Query: 232 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 411
+++A+S +A A A+ A D+R +L ++ P +GWV +NI QLN+M
Sbjct: 58 AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111
Query: 412 KNKRAVPAAVGMGAAASLLFAQSAEAS 492
++ +AV A +G+GAAA+ A EAS
Sbjct: 112 RSSQAVAAGLGLGAAAAAGMAAPPEAS 138
[10][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 54.7 bits (130), Expect = 3e-06
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +1
Query: 76 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 255
+ + A A R + R+A+ + RA S VV + + + + G A +++ AAS
Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67
Query: 256 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 420
A A AA EL A D R I + PVLGWV +NI QL M A N K
Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126
Query: 421 RAVPAAVGMGAAASLL 468
RA A G A++L+
Sbjct: 127 RAAGALAGGLTASALM 142