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[1][TOP]
>UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE
Length = 115
Score = 176 bits (447), Expect = 6e-43
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 3 ATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 182
ATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG
Sbjct: 31 ATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 90
Query: 183 TMWAIWFIGQKDLGDFEDADDGLKL 257
TMWAIWFIGQKDLGDFEDADDGLKL
Sbjct: 91 TMWAIWFIGQKDLGDFEDADDGLKL 115
[2][TOP]
>UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1
Tax=Spinacia oleracea RepID=PSBW_SPIOL
Length = 137
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +3
Query: 6 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 185
TT + + ++L+ A ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG
Sbjct: 56 TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115
Query: 186 MWAIWFIGQKDLGDFEDADDGLKL 257
+WA++F+ L ED + GL L
Sbjct: 116 IWALYFVYASGLE--EDEESGLSL 137
[3][TOP]
>UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHC2_MEDTR
Length = 136
Score = 73.9 bits (180), Expect = 6e-12
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 27 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 206
A +A +S ATL++ A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI
Sbjct: 64 ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121
Query: 207 GQKDLGDFEDADDGLKL 257
L ED D GL L
Sbjct: 122 YASSLD--EDEDSGLSL 136
[4][TOP]
>UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SYI0_SOYBN
Length = 132
Score = 72.8 bits (177), Expect = 1e-11
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +3
Query: 18 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 197
S + ++L+ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA+
Sbjct: 55 SNIGMGASLLAAAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWAL 114
Query: 198 WFIGQKDLGDFEDADDGLKL 257
+F+ L ED + GL L
Sbjct: 115 YFVYASTLE--EDEESGLSL 132
[5][TOP]
>UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9S4T1_RICCO
Length = 132
Score = 71.2 bits (173), Expect = 4e-11
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +3
Query: 15 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 194
RS ++++++ + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+
Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113
Query: 195 IWFIGQKDLGDFEDADDGLKL 257
+ + L D D D GL L
Sbjct: 114 FYTVYTSTLDD--DEDSGLSL 132
[6][TOP]
>UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWM3_SOYBN
Length = 136
Score = 70.9 bits (172), Expect = 5e-11
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 39 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 218
++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+
Sbjct: 66 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSS 125
Query: 219 LGDFEDADDGLKL 257
L ED + GL L
Sbjct: 126 LE--EDEESGLSL 136
[7][TOP]
>UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SZ65_RICCO
Length = 134
Score = 70.5 bits (171), Expect = 6e-11
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +3
Query: 18 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 197
S VA VA S + AT A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF +W++
Sbjct: 59 SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116
Query: 198 WFIGQKDLGDFEDADDGLKL 257
+ + L ED D L L
Sbjct: 117 YTVYTSTLD--EDDDSALSL 134
[8][TOP]
>UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUM2_VITVI
Length = 135
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +3
Query: 42 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 221
M + AT+++ PA ALVDERM+ +GTG PFG+++ LGW+L GVFG +WA++F+ L
Sbjct: 67 MAAACAATMSS-PAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFVYTATL 125
Query: 222 GDFEDADDGLKL 257
ED + GL L
Sbjct: 126 E--EDEESGLSL 135
[9][TOP]
>UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9GS65_POPTR
Length = 134
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +3
Query: 9 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 182
TV E +K ++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF
Sbjct: 52 TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111
Query: 183 TMWAIWFIGQKDLGDFEDADDGLKL 257
+W+++F+ L ED D G+ L
Sbjct: 112 FIWSLYFVYTSSLD--EDEDSGMSL 134
[10][TOP]
>UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QVP6_VITVI
Length = 135
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = +3
Query: 18 SEVAKKVAMLSTLPATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 182
S++ ++M ++L A AA PA ALVDER++ +GTG PFG+++ +LGW+L GVFG
Sbjct: 53 SDMGSSISMGASLMAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFG 112
Query: 183 TMWAIWFIGQKDLGDFEDADDGLKL 257
+WA++F L ED + GL L
Sbjct: 113 LIWALYFTYTATLE--EDDESGLSL 135
[11][TOP]
>UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T2W3_SOYBN
Length = 133
Score = 69.3 bits (168), Expect = 1e-10
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +3
Query: 60 ATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDA 239
AT+++ A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED
Sbjct: 70 ATMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLE--EDE 127
Query: 240 DDGLKL 257
+ GL L
Sbjct: 128 ESGLSL 133
[12][TOP]
>UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum
bicolor RepID=C5XLL1_SORBI
Length = 126
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Frame = +3
Query: 24 VAKKVAMLSTLPA----TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMW 191
V+ K A S L A T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W
Sbjct: 47 VSAKAAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIW 106
Query: 192 AIWFIGQKDLGDFEDADDGLKL 257
+++ + DL ED + GL L
Sbjct: 107 SLYTVYTSDLD--EDEESGLSL 126
[13][TOP]
>UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center
n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM
Length = 133
Score = 68.9 bits (167), Expect = 2e-10
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 SEVAKKVAMLSTLPAT-LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 194
S V V+ +T T + ++PA ALVD+RM+ +GTG PFG+++ +LGW+LLGVFG +W
Sbjct: 55 SAVGAGVSAAATAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWT 114
Query: 195 IWFIGQKDLGDFEDADDGLKL 257
+F L ED + GL L
Sbjct: 115 FYFTYTSSLD--EDEESGLSL 133
[14][TOP]
>UniRef100_Q10NF9 Retrotransposon protein, putative, unclassified, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q10NF9_ORYSJ
Length = 840
Score = 68.6 bits (166), Expect = 2e-10
Identities = 56/151 (37%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = -3
Query: 471 HQYPQPHHSSTAELLTKPWNDSTAPGRFKRALPLPHPHPPLHRRLRTAKNRGHCSSHDYE 292
H+ P PH S + P+ +P R P P P R R+ + R SS D
Sbjct: 278 HRSPSPHRRSHIRRKSPPFVRQRSPSPHHRRSPGRAPRSPSPARHRSPRRR---SSLDRH 334
Query: 291 AAKKGSTTKPFTASGHRRRPRSRPGPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGGQCRR 112
+ +P + S RRRPRS P P R R P+ RRRP PSPGR R R RR
Sbjct: 335 WSPSPGRRRPRSPSPGRRRPRS-PSPGRRRPRSPSPGRRRPRSPSPGR-RRPRSPSPGRR 392
Query: 111 RSCAHRPGRRRGGQP-G*PAGCSAWRPSWPP 22
R + PGRRR P G P S RP P
Sbjct: 393 RPRSRSPGRRRSPSPRGSPRLRSPKRPRRSP 423
[15][TOP]
>UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C3A9_VITVI
Length = 70
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +3
Query: 42 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 221
M + +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F L
Sbjct: 1 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 60
Query: 222 GDFEDADDGLKL 257
ED + GL L
Sbjct: 61 E--EDDESGLSL 70
[16][TOP]
>UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=PSBW_ARATH
Length = 133
Score = 68.2 bits (165), Expect = 3e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 72 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 251
++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL
Sbjct: 74 SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE--EDEESGL 131
Query: 252 KL 257
L
Sbjct: 132 SL 133
[17][TOP]
>UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana
RepID=Q41908_ARATH
Length = 133
Score = 67.8 bits (164), Expect = 4e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 72 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 251
++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL
Sbjct: 74 SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSTLE--EDEESGL 131
Query: 252 KL 257
L
Sbjct: 132 SL 133
[18][TOP]
>UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TM37_MAIZE
Length = 127
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Frame = +3
Query: 12 VRSEVAKKVAMLSTLPA-----------TLAAHPAFALVDERMNGDGTGRPFGVNDPVLG 158
VR AK A +ST A T +A PA ALVDERM+ +GTG G+++ +LG
Sbjct: 36 VRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLG 95
Query: 159 WVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 257
W+LLGVFG +W+++ I DL D ++ GL L
Sbjct: 96 WILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127
[19][TOP]
>UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6T2W4_MAIZE
Length = 131
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Frame = +3
Query: 12 VRSEVAKKVAMLSTLPA-----------TLAAHPAFALVDERMNGDGTGRPFGVNDPVLG 158
VR AK A +ST A T +A PA ALVDERM+ +GTG G+++ +LG
Sbjct: 40 VRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLG 99
Query: 159 WVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 257
W+LLGVFG +W+++ I DL D ++ GL L
Sbjct: 100 WILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 131
[20][TOP]
>UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B4FUI4_MAIZE
Length = 127
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Frame = +3
Query: 12 VRSEVAKKVAMLSTLPA-----------TLAAHPAFALVDERMNGDGTGRPFGVNDPVLG 158
VR AK A +ST A T +A PA ALVDERM+ +GTG G+++ +LG
Sbjct: 36 VRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLG 95
Query: 159 WVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 257
W+LLGVFG +W+++ I DL D ++ GL L
Sbjct: 96 WILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127
[21][TOP]
>UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWZ8_SOYBN
Length = 133
Score = 67.0 bits (162), Expect = 7e-10
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +3
Query: 39 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 218
++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+
Sbjct: 63 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTST 122
Query: 219 LGDFEDADDGLKL 257
L + E++ GL L
Sbjct: 123 LEEGEES--GLSL 133
[22][TOP]
>UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ET99_ORYSJ
Length = 107
Score = 67.0 bits (162), Expect = 7e-10
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = +3
Query: 12 VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMW 191
+R+ +++ A S L A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W
Sbjct: 27 MRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIW 86
Query: 192 AIWFIGQKDLGDFEDADDGLKL 257
+++ I DL + E++ GL L
Sbjct: 87 SLYTIYTSDLEEDEES-GGLSL 107
[23][TOP]
>UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJA9_9ROSI
Length = 133
Score = 66.6 bits (161), Expect = 9e-10
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +3
Query: 39 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 218
++++ + A + PA ALVDER++ +GTG PFG+++ +L W+LLGVF +W+++F+
Sbjct: 63 SLMAAVCAATISSPALALVDERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYTSS 122
Query: 219 LGDFEDADDGLKL 257
L ED D G+ L
Sbjct: 123 LD--EDEDSGMSL 133
[24][TOP]
>UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3
Tax=Oryza sativa RepID=PSBW_ORYSJ
Length = 124
Score = 66.6 bits (161), Expect = 9e-10
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +3
Query: 27 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 206
A K A S L A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 49 AVKGAGASLLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTI 108
Query: 207 GQKDLGDFEDADDGLKL 257
DL + E++ GL L
Sbjct: 109 YTSDLEEDEES-GGLSL 124
[25][TOP]
>UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6SMK2_MAIZE
Length = 130
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Frame = +3
Query: 24 VAKKVAMLSTLPA----TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMW 191
V+ K A S L A T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W
Sbjct: 50 VSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIW 109
Query: 192 AIWFIGQKDLGDFEDADDGLKL 257
+++ I DL D ++ GL L
Sbjct: 110 SLYTIYTSDL-DEDEESGGLSL 130
[26][TOP]
>UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SEQ6_PHYPA
Length = 142
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +3
Query: 33 KVAMLSTLPATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIG 209
++A T AT+A AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F
Sbjct: 68 QLAAAVTSAATMAYAHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTY 127
Query: 210 QKDLGDFEDADDGLKL 257
L + +D D GL L
Sbjct: 128 SSTLPEGDD-DSGLSL 142
[27][TOP]
>UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam
RepID=Q8W536_9FABA
Length = 96
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +3
Query: 42 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 221
M + A + PA ALVDER++ +GTG PFG+++ +LGW+L VFG +W +FI L
Sbjct: 27 MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSL 86
Query: 222 GDFEDADDGLKL 257
ED + GL L
Sbjct: 87 E--EDEESGLSL 96
[28][TOP]
>UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PEP9_POPTR
Length = 134
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +3
Query: 39 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 218
++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF +WA++F
Sbjct: 64 SLMAAVCAASMSSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYTAT 123
Query: 219 LGDFEDADDGLKL 257
L ED + GL L
Sbjct: 124 LE--EDEESGLSL 134
[29][TOP]
>UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp.
RCC299 RepID=C1FIQ5_9CHLO
Length = 118
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 ATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGV 176
AT ++ V KK A+LS L A PA A+VDER+NGDGTG G+ND +LG++LL +
Sbjct: 30 ATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGDGTGLILGINDEILGFILLTI 88
Query: 177 FGTMWAIWFIGQKDLG---DFEDADDGLKL 257
+++ +F QKD G E+ D GL L
Sbjct: 89 PALVFSQFFYAQKDDGIAAGGENDDSGLSL 118
[30][TOP]
>UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans
RepID=Q7XYI4_BIGNA
Length = 147
Score = 63.9 bits (154), Expect = 6e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 54 LPATLAAH--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGD 227
L A A H PA ALVD R+NGDG G P G+ND L ++L GVF T+W ++ K + D
Sbjct: 77 LAAVGALHQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVYATSVKGISD 136
Query: 228 FEDADDGLKL 257
+D D G+ L
Sbjct: 137 NDDEDSGMGL 146
[31][TOP]
>UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TMB3_MAIZE
Length = 127
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = +3
Query: 39 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 218
++L+ + + P ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ +
Sbjct: 57 SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTST 116
Query: 219 LGDFEDADDGLKL 257
L ED D GL L
Sbjct: 117 LD--EDDDSGLSL 127
[32][TOP]
>UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora
stellata RepID=B5A4J5_GYMST
Length = 147
Score = 63.5 bits (153), Expect = 8e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 54 LPATLAAH--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGD 227
L AT A H PA ALVD R+NGDG G P G+ND L ++L GVF +WA + K + +
Sbjct: 77 LSATAALHQLPAEALVDARLNGDGAGIPLGINDSRLFFILAGVFTLVWAAYSTSVKGISN 136
Query: 228 FEDADDGLKL 257
+D D GL +
Sbjct: 137 NDDDDSGLSI 146
[33][TOP]
>UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SEQ5_PHYPA
Length = 64
Score = 63.5 bits (153), Expect = 8e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 72 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 251
AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F L + +D D GL
Sbjct: 4 AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGL 62
Query: 252 KL 257
L
Sbjct: 63 SL 64
[34][TOP]
>UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PQQ7_PICSI
Length = 149
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +3
Query: 63 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 242
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D
Sbjct: 87 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 144
Query: 243 DGLKL 257
GL L
Sbjct: 145 SGLSL 149
[35][TOP]
>UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NLC2_PICSI
Length = 146
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +3
Query: 63 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 242
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F G ED D
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYS--GVKEDED 141
Query: 243 DGLKL 257
GL L
Sbjct: 142 SGLSL 146
[36][TOP]
>UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NL01_PICSI
Length = 146
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +3
Query: 63 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 242
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 141
Query: 243 DGLKL 257
GL L
Sbjct: 142 SGLSL 146
[37][TOP]
>UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXP0_PHYPA
Length = 109
Score = 62.8 bits (151), Expect = 1e-08
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +3
Query: 33 KVAMLSTLPATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIG 209
++A T ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F
Sbjct: 34 QLAAAVTSAATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYFFV 93
Query: 210 QKDLGDFEDADDGLKL 257
D+G GL L
Sbjct: 94 LLDVGQRVTMTSGLDL 109
[38][TOP]
>UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens
RepID=Q9AXN9_PHYPA
Length = 69
Score = 60.8 bits (146), Expect = 5e-08
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 236
ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F L + +D
Sbjct: 4 ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYFSYSSTLPEGDD 63
Query: 237 ADDGLKL 257
D GL L
Sbjct: 64 -DSGLDL 69
[39][TOP]
>UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU
Length = 162
Score = 60.5 bits (145), Expect = 7e-08
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 ATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 182
+ T E+ K+VA L + + PA A+VD+R+NGDGTG P G+ND LG +L V
Sbjct: 74 SATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGIILATVPL 133
Query: 183 TMWAIWFIGQKD----LGDFEDADDGLKL 257
++ ++FI K + +D D GL L
Sbjct: 134 AIFGLYFIAGKQDASIVAGGKDDDSGLSL 162
[40][TOP]
>UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla
CCMP1545 RepID=C1N1F2_9CHLO
Length = 119
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 TVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 182
TV A A+LS +LAA PA A+VDER+NGDGTG G+ND +LG+VLL +
Sbjct: 32 TVAKAQAPTKAVLSAAVVSLAAQALPALAVVDERLNGDGTGLILGLNDELLGFVLLTIPT 91
Query: 183 TMWAIWFIGQKDLG---DFEDADDGLKL 257
+++ ++ QKD G ++ D GL L
Sbjct: 92 LIFSQFYAAQKDEGIEAGGKNDDSGLSL 119
[41][TOP]
>UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1
Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA
Length = 156
Score = 55.8 bits (133), Expect = 2e-06
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Frame = +3
Query: 9 TVRS---EVAKKVAMLSTLPATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGV 176
TVR+ E K+V S L +++ PA A+VD+R+NGDGTG P G+ND LG +L V
Sbjct: 66 TVRATPQEAGKQVFGTSMLISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASV 125
Query: 177 FGTMWAIWFI-GQKDLG---DFEDADDGLKL 257
+++++FI G++D G ++ D GL L
Sbjct: 126 PLAIFSLYFIAGKQDAGIENGGKNDDSGLSL 156
[42][TOP]
>UniRef100_A4X9E5 Putative uncharacterized protein n=1 Tax=Salinispora tropica
CNB-440 RepID=A4X9E5_SALTO
Length = 328
Score = 54.7 bits (130), Expect = 4e-06
Identities = 46/141 (32%), Positives = 52/141 (36%)
Frame = -3
Query: 474 PHQYPQPHHSSTAELLTKPWNDSTAPGRFKRALPLPHPHPPLHRRLRTAKNRGHCSSHDY 295
P Q P HH ++P + A R P P P P R A N S
Sbjct: 105 PRQPPGGHHHRPGRRASEPPAPAGARPARPRPPPPPSPGSPAAGRTAAATNHRQPSGPVR 164
Query: 294 EAAKKGSTTKPFTASGHRRRPRSRPGPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGGQCR 115
A + P RR R P P GR P G PGR R RR G+
Sbjct: 165 SACPPSTRPAPLP-----RRRRGPPHPCGRAAGRSAGAGTPPPGTRPGRSRRARRAGRAA 219
Query: 114 RRSCAHRPGRRRGGQPG*PAG 52
RRS HRPGR G+ PAG
Sbjct: 220 RRS--HRPGRLTAGRT--PAG 236