AV623201 ( LC060c10_r )

[UP]


[1][TOP]
>UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8JGP8_CHLRE
          Length = 188

 Score =  144 bits (362), Expect = 4e-33
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF
Sbjct: 1   MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPLSDEQIAAQ
Sbjct: 61  SYLPPLSDEQIAAQ 74

[2][TOP]
>UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
           Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE
          Length = 185

 Score =  144 bits (362), Expect = 4e-33
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF
Sbjct: 1   MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPLSDEQIAAQ
Sbjct: 61  SYLPPLSDEQIAAQ 74

[3][TOP]
>UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE
          Length = 185

 Score =  142 bits (359), Expect = 9e-33
 Identities = 73/74 (98%), Positives = 74/74 (100%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF
Sbjct: 1   MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPL+DEQIAAQ
Sbjct: 61  SYLPPLTDEQIAAQ 74

[4][TOP]
>UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U90_VOLCA
          Length = 185

 Score =  134 bits (338), Expect = 2e-30
 Identities = 66/74 (89%), Positives = 72/74 (97%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAA++AKSSV+A VARPARSSVRP+A LKPAVKAAPVAAPAQAN+MMVWTPVNNKMFETF
Sbjct: 1   MAAIVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPL+DEQIAAQ
Sbjct: 61  SYLPPLTDEQIAAQ 74

[5][TOP]
>UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U92_VOLCA
          Length = 185

 Score =  131 bits (330), Expect = 2e-29
 Identities = 63/74 (85%), Positives = 71/74 (95%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAA++AKSSV+ AV RPARSSVRP+A LKPA+KAAPVA+PAQAN+MMVWTPVNNKMFETF
Sbjct: 1   MAAIVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPL+DEQIAAQ
Sbjct: 61  SYLPPLTDEQIAAQ 74

[6][TOP]
>UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U91_VOLCA
          Length = 185

 Score =  128 bits (321), Expect = 2e-28
 Identities = 63/74 (85%), Positives = 68/74 (91%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAAVIAKSSV+ AVARPARS VRP+A LKP+V+A PVA P QAN+MMVWTPVNNKMFETF
Sbjct: 1   MAAVIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETF 60

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPLSDEQIAAQ
Sbjct: 61  SYLPPLSDEQIAAQ 74

[7][TOP]
>UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
           tertiolecta RepID=Q5VBK1_DUNTE
          Length = 189

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 46/75 (61%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-QANQMMVWTPVNNKMFET 192
           MAA++AKS+  A +A+ +R++ +  A+LKPAV+AAP A PA +ANQMMVW P+NNK FET
Sbjct: 1   MAALLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFET 60

Query: 193 FSYLPPLSDEQIAAQ 237
           FSYLPPL+ +QIA Q
Sbjct: 61  FSYLPPLTADQIAKQ 75

[8][TOP]
>UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1
           Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE
          Length = 188

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA-APA-QANQMMVWTPVNNKMFE 189
           MA++IAKS+  A VA  +R+S +  A+LKPAV+A P A APA +ANQMMVW P+NNK FE
Sbjct: 1   MASLIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFE 58

Query: 190 TFSYLPPLSDEQIAAQ 237
           TFSYLPPL+ +QIA Q
Sbjct: 59  TFSYLPPLTADQIARQ 74

[9][TOP]
>UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
           salina RepID=Q5XR40_DUNSA
          Length = 190

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARP-ARSSVRPMAALKPAV-KAAPVA-APA-QANQMMVWTPVNNKM 183
           MAA+IAK+    AVA P +R S +  A+LKPAV + AP A APA + NQMMVW PVNNK 
Sbjct: 1   MAALIAKTC--PAVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ 58

Query: 184 FETFSYLPPLSDEQIAAQ 237
           FETFSYLPPL+ +QIA Q
Sbjct: 59  FETFSYLPPLTADQIARQ 76

[10][TOP]
>UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
           pyrenoidosa RepID=C7FF11_CHLPY
          Length = 184

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 38/74 (51%), Positives = 46/74 (62%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MA+ I+ S V A VA   RS ++P      AV  +      + + MMVWTPVNNK FETF
Sbjct: 1   MASTISASLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETF 59

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPLS +QIA Q
Sbjct: 60  SYLPPLSGDQIARQ 73

[11][TOP]
>UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS5_ACECL
          Length = 184

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MAA +   ++  +    ARSS  P  A      A+ VA   ++ +MMVW P NNKMFETF
Sbjct: 1   MAAAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETF 59

Query: 196 SYLPPLSDEQIAAQ 237
           SYLPPL+DEQI+ Q
Sbjct: 60  SYLPPLTDEQISKQ 73

[12][TOP]
>UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8JGP5_CHLRE
          Length = 139

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 154 MVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           MVWTPVNNKMFETFSYLPPLSDEQIAAQ
Sbjct: 1   MVWTPVNNKMFETFSYLPPLSDEQIAAQ 28

[13][TOP]
>UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO
          Length = 165

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = +1

Query: 76  SVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           ++R  A  + A KA   A PA+    MVW PVNNK FETFSYLPPL+DEQIA Q
Sbjct: 2   ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQ 52

[14][TOP]
>UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
           pyrenoidosa RepID=C7FF10_CHLPY
          Length = 181

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 207
           ++  +A  A  +VRP+A LK A   +     +  +      M VWTP+NNKMFETFSYLP
Sbjct: 1   MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60

Query: 208 PLSDEQIAAQ 237
           PL+D +I+ Q
Sbjct: 61  PLTDAEISRQ 70

[15][TOP]
>UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
           Tax=Euglena gracilis RepID=Q9STC5_EUGGR
          Length = 271

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 32/50 (64%)
 Frame = +1

Query: 88  MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           MA +KP  K A V        M VW PVNNK FETFSYLPPLSD QIA Q
Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQ 163

[16][TOP]
>UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1
           Tax=Euglena gracilis RepID=RBS_EUGGR
          Length = 1273

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 32/50 (64%)
 Frame = +1

Query: 88  MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           MA +KP  K A V        M VW PVNNK FETFSYLPPLSD QIA Q
Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQ 163

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 32/65 (49%), Positives = 38/65 (58%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
           +S  V RP+ SS         +  +  +AA     +M VW PVNNK FETFSYLPPLSD 
Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877

Query: 223 QIAAQ 237
           QIA Q
Sbjct: 878 QIAKQ 882

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 32/65 (49%), Positives = 36/65 (55%)
 Frame = +1

Query: 43   VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
            +S  V RP+ SS               +AA     +M VW PVNNK FETFSYLPPLSD 
Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164

Query: 223  QIAAQ 237
            QIA Q
Sbjct: 1165 QIAKQ 1169

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 35/65 (53%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
           +S  V RP+ SS               +AA      M VW PVNNK FETFSYLPPLSD 
Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302

Query: 223 QIAAQ 237
           QIA Q
Sbjct: 303 QIAKQ 307

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 36/65 (55%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
           +S  V RP+ SS            +  +AA      M VW PVNNK FETFSYLPPLSD 
Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445

Query: 223 QIAAQ 237
           QIA Q
Sbjct: 446 QIAKQ 450

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 35/65 (53%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
           +S  V RP+ SS               +AA      M VW PVNNK FETFSYLPPLSD 
Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589

Query: 223 QIAAQ 237
           QIA Q
Sbjct: 590 QIAKQ 594

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 36/65 (55%)
 Frame = +1

Query: 43  VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
           +S  V RP+ SS            +  +AA      M VW PVNNK FETFSYLPPLSD 
Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732

Query: 223 QIAAQ 237
           QIA Q
Sbjct: 733 QIAKQ 737

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 35/65 (53%)
 Frame = +1

Query: 43   VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 222
            +S  V RP+ SS               +AA      M VW PVNNK FETFSYLPPLSD 
Sbjct: 971  ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020

Query: 223  QIAAQ 237
            QIA Q
Sbjct: 1021 QIAKQ 1025

[17][TOP]
>UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
           Tax=Chlamydomonas moewusii RepID=RBS_CHLMO
          Length = 168

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = +1

Query: 55  VARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 234
           +A  A  SV   AA +   +AAPVAAPA A +  VW PVNNK +ETFSYLPPL++++I  
Sbjct: 1   MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56

Query: 235 Q 237
           Q
Sbjct: 57  Q 57

[18][TOP]
>UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS6_ACECL
          Length = 182

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +1

Query: 19  AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPV--AAPAQANQMMVWTPVNNKMFET 192
           A +++K+ +S+      +   +P+A  K ++    V  +A  +  +MMVW P NNKMFET
Sbjct: 3   ATMMSKTIISS------KQCSKPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFET 56

Query: 193 FSYLPPLSDEQIAAQ 237
           FSYLPPL+DEQI+ Q
Sbjct: 57  FSYLPPLTDEQISKQ 71

[19][TOP]
>UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
           pusilla CCMP1545 RepID=C1N9I5_9CHLO
          Length = 186

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = +1

Query: 67  ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           A  SV P+ A  PAV     +   +++ M VW P NNK FETFS+LPPLSD++IA Q
Sbjct: 3   ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQ 56

[20][TOP]
>UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
           pusilla CCMP1545 RepID=C1N9I4_9CHLO
          Length = 183

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = +1

Query: 67  ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           A  SV P+ A  PAV     +   +++ M VW P NNK FETFS+LPPLSD++IA Q
Sbjct: 3   ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQ 56

[21][TOP]
>UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
           pusilla CCMP1545 RepID=C1N9I3_9CHLO
          Length = 204

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = +1

Query: 67  ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           A  SV P+ A  PAV     +   +++ M VW P NNK FETFS+LPPLSD++IA Q
Sbjct: 3   ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQ 56

[22][TOP]
>UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
           sp. RCC299 RepID=C1E330_9CHLO
          Length = 179

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
 Frame = +1

Query: 88  MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           ++A+ P +  APV +  +A   N MMVW P  NK FETFS+LPPLSD+++A Q
Sbjct: 4   ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQ 56

[23][TOP]
>UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
           sp. RCC299 RepID=C1E329_9CHLO
          Length = 191

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
 Frame = +1

Query: 88  MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           ++A+ P +  APV +  +A   N MMVW P  NK FETFS+LPPLSD+++A Q
Sbjct: 4   ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQ 56

[24][TOP]
>UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Parietochloris incisa RepID=B3VSA1_9CHLO
          Length = 189

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNN 177
           MAA  A S +SA VA  A ++  R + AL PA +AA  A    +N     QMMVW P NN
Sbjct: 1   MAAACA-SLLSAPVAVVASAAPARSLKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNN 58

Query: 178 KMFETFSYLPPLSDEQIAAQ 237
           + FET S+LPPL+D+QIA Q
Sbjct: 59  RYFETLSFLPPLTDDQIAKQ 78

[25][TOP]
>UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS3_ACECL
          Length = 183

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 127 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           AA  +   MMVW P NNKMFETFSYLPPL+DEQI+ Q
Sbjct: 36  AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQ 72

[26][TOP]
>UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS4_ACECL
          Length = 182

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +1

Query: 67  ARSSVRPMAALKPAV--KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           ++   +P A  K ++  K     A  +  +MMVW P NNKMFETFSYLPPL+DEQI+ Q
Sbjct: 13  SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQ 71

[27][TOP]
>UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
           sp. HS-5 RepID=Q9XFT5_9CHLO
          Length = 158

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +1

Query: 112 KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           KA PVAAP +A+   VW PVNNK +ETFSYLP L+ EQIA Q
Sbjct: 13  KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQ 53

[28][TOP]
>UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
           Tax=Acetabularia acetabulum RepID=RBS3_ACEAT
          Length = 182

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +1

Query: 16  MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 189
           MA+++   SV  S   A+P  S   P   L     A  +A   +   MMVW P NNKMFE
Sbjct: 1   MASIMMNKSVVLSKECAKPLAS---PKVTLNKRGFATTIATKNRG--MMVWQPFNNKMFE 55

Query: 190 TFSYLPPLSDEQIAAQ 237
           TFS+LPPL+DEQI+ Q
Sbjct: 56  TFSFLPPLTDEQISKQ 71

[29][TOP]
>UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
           Tax=Acetabularia acetabulum RepID=RBS1_ACEAT
          Length = 182

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = +1

Query: 16  MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 189
           MA+++   SV  S   A+P  +   P   L     A  +A   +  +MMVW P NNKMFE
Sbjct: 1   MASIMMNKSVVLSKECAKPLAT---PKVTLNKRGFATTIAT--KNREMMVWQPFNNKMFE 55

Query: 190 TFSYLPPLSDEQIAAQ 237
           TFS+LPPL+DEQI+ Q
Sbjct: 56  TFSFLPPLTDEQISKQ 71

[30][TOP]
>UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
           bacillaris RepID=Q68BK9_NANBA
          Length = 182

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 41/74 (55%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MA+ IA S+ +  VA   + +     A    V    V    +   M+VWTP+NNK FETF
Sbjct: 1   MASTIAFSTAAVRVAPITKVNATSTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57

Query: 196 SYLPPLSDEQIAAQ 237
           S+LPPLSD +I  Q
Sbjct: 58  SFLPPLSDSEITKQ 71

[31][TOP]
>UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
           bacillaris RepID=Q68BK3_NANBA
          Length = 180

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MA+ +A    + A+ RP  + V+   A K  V A   +     +  MVWTPVNNK FETF
Sbjct: 1   MASALA---FTPALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETF 55

Query: 196 SYLPPLSDEQIAAQ 237
           S+LPPLS+ +I+ Q
Sbjct: 56  SFLPPLSESEISKQ 69

[32][TOP]
>UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS7_ACECL
          Length = 183

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 151 MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           MMVW P NNKMFETFSYLPPL+DEQI+ Q
Sbjct: 44  MMVWQPFNNKMFETFSYLPPLTDEQISKQ 72

[33][TOP]
>UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
           Tax=Acetabularia acetabulum RepID=RBS5_ACEAT
          Length = 183

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = +1

Query: 82  RPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           +P A  K  +     A  +  N+   MMVW P NNKMFETFS+LPPL+DEQI+ Q
Sbjct: 18  KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQ 72

[34][TOP]
>UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
           bacillaris RepID=Q68BL0_NANBA
          Length = 182

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           MA+ IA S+ +  +A   + +     A    V    V    +   M+VWTP+NNK FETF
Sbjct: 1   MASTIAISTAAVRIAPITKVNAASTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57

Query: 196 SYLPPLSDEQIAAQ 237
           S+LPPLSD +I  Q
Sbjct: 58  SFLPPLSDSEITKQ 71

[35][TOP]
>UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
           Tax=Acetabularia acetabulum RepID=RBS4_ACEAT
          Length = 182

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +1

Query: 19  AAVIAKSSV-SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 195
           AA++ KS V S    +PA +   P         A+ VA   +  +MMVW P NNKMFETF
Sbjct: 3   AAMMNKSVVLSKQCTKPAAT---PKVVTSKRSFASTVAN--KNREMMVWQPFNNKMFETF 57

Query: 196 SYLPPLSDEQIAAQ 237
           S+LPPL+DEQI+ Q
Sbjct: 58  SFLPPLTDEQISKQ 71

[36][TOP]
>UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
           Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA
          Length = 214

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPVAAPAQANQMMVWTPV 171
           + A +A    S+ V  P+ SS V+  + LK A        K + V   ++   M VW P+
Sbjct: 39  VVAPVALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPI 98

Query: 172 NNKMFETFSYLPPLSDEQIAAQ 237
               FETFSYLPPL+D+QIA Q
Sbjct: 99  GQPKFETFSYLPPLTDDQIAKQ 120

[37][TOP]
>UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9TCL7_PHYPA
          Length = 184

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
 Frame = +1

Query: 19  AAVIAKSSVSAAVARPARSS----VRPMAALKPAV-------KAAPVAAPAQANQMMVWT 165
           +AV A  S+ AA +  A S+    V+  + LKPA        K   V   ++   M VW 
Sbjct: 7   SAVAAPVSLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWN 66

Query: 166 PVNNKMFETFSYLPPLSDEQIAAQ 237
           P+    FETFSYLPPL+D+QIA Q
Sbjct: 67  PIGQPKFETFSYLPPLTDDQIAKQ 90

[38][TOP]
>UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9SCN2_PHYPA
          Length = 182

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 16/90 (17%)
 Frame = +1

Query: 16  MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ-- 150
           MA+V+A SSV         S++V+    +SV+  + LK A     KA  +++    ++  
Sbjct: 1   MASVVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQ 60

Query: 151 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
            M VW P+    FETFSYLPPLSD+ IA Q
Sbjct: 61  CMQVWNPIGQTKFETFSYLPPLSDDAIAKQ 90

[39][TOP]
>UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9U4X7_PHYPA
          Length = 182

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
 Frame = +1

Query: 16  MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 150
           MA+++A S+V         S+AV+    SSV+  + LK A   +  A    + Q      
Sbjct: 1   MASIVAASTVVAPAAFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60

Query: 151 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
            M VW P+    FETFSYLPPLSD+ IA Q
Sbjct: 61  CMQVWNPIGMTKFETFSYLPPLSDDAIAKQ 90

[40][TOP]
>UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9S3R8_PHYPA
          Length = 181

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSS---------VRPMAALKPAV-------KAAPVAAPAQAN 147
           MA+++A S+V A  A  A SS         V+  + LK A        + + V   ++ N
Sbjct: 1   MASIVAASTVVAPAAFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVN 60

Query: 148 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
            M VW P+    FETFSYLPPLSD+ IA Q
Sbjct: 61  CMQVWNPIGMTKFETFSYLPPLSDDAIAKQ 90

[41][TOP]
>UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=Q75WT7_PHYPA
          Length = 184

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 174
           ++  +A SSV+A+      SSV+  + LK A        + + V   ++   M VW P+ 
Sbjct: 13  VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 69

Query: 175 NKMFETFSYLPPLSDEQIAAQ 237
              FETFSYLPPLSD+QIA Q
Sbjct: 70  QPKFETFSYLPPLSDDQIARQ 90

[42][TOP]
>UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris
           vittata RepID=Q43110_PTEVI
          Length = 174

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = +1

Query: 16  MAAVIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPVAAPAQA-------NQMMVWTPV 171
           MA ++A  +VSA + A  A S  +  + LK     AP  A   A       + M+VW P 
Sbjct: 1   MATMLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPY 60

Query: 172 NNKMFETFSYLPPLSDEQIAAQ 237
           +NK FET SYLPPL+++QIA Q
Sbjct: 61  DNKKFETLSYLPPLTNDQIAKQ 82

[43][TOP]
>UniRef100_A9U380 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9U380_PHYPA
          Length = 156

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
 Frame = +1

Query: 16  MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 174
           ++  +A SSV+A+      SSV+  + LK A        + + V   ++   M VW P+ 
Sbjct: 17  VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 73

Query: 175 NKMFETFSYLPPLSDEQIAAQ 237
              FETFSYLPPLSD+QIA Q
Sbjct: 74  QPKFETFSYLPPLSDDQIARQ 94

[44][TOP]
>UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9U4X8_PHYPA
          Length = 182

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
 Frame = +1

Query: 16  MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 150
           MA+++A S+V         S+AV     SSV+  + LK A   +  A    + Q      
Sbjct: 1   MASIVAASTVVAPAAFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60

Query: 151 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
            M VW P+    FETFSYLPPLSD+ IA Q
Sbjct: 61  CMQVWNPIGMTKFETFSYLPPLSDDAIAKQ 90

[45][TOP]
>UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
           Tax=Batophora oerstedii RepID=RBS_BATOE
          Length = 175

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +1

Query: 136 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQ 237
           +++  MMVW P NNK FETFSYLPPL+D+QI  Q
Sbjct: 31  SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQ 64