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[1][TOP] >UniRef100_A8HSJ0 DNA-directed RNA polymerases I/II/III subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8HSJ0_CHLRE Length = 79 Score = 166 bits (419), Expect = 1e-39 Identities = 79/79 (100%), Positives = 79/79 (100%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERAAQAQGAQRTGQ 475 NYNTLERAAQAQGAQRTGQ Sbjct: 61 NYNTLERAAQAQGAQRTGQ 79 [2][TOP] >UniRef100_A9NJU8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NJU8_PICSI Length = 71 Score = 131 bits (330), Expect = 2e-29 Identities = 61/68 (89%), Positives = 64/68 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTLER+ Sbjct: 61 NYNTLERS 68 [3][TOP] >UniRef100_UPI0001982A1C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982A1C Length = 71 Score = 130 bits (327), Expect = 5e-29 Identities = 60/68 (88%), Positives = 64/68 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTLE++ Sbjct: 61 NYNTLEKS 68 [4][TOP] >UniRef100_A9PF10 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PF10_POPTR Length = 71 Score = 130 bits (327), Expect = 5e-29 Identities = 60/68 (88%), Positives = 64/68 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTLE++ Sbjct: 61 NYNTLEKS 68 [5][TOP] >UniRef100_Q1EP53 DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative n=1 Tax=Musa balbisiana RepID=Q1EP53_MUSBA Length = 70 Score = 130 bits (326), Expect = 7e-29 Identities = 60/67 (89%), Positives = 63/67 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLE+ Sbjct: 61 NYNTLEK 67 [6][TOP] >UniRef100_C1N0B9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N0B9_9CHLO Length = 74 Score = 130 bits (326), Expect = 7e-29 Identities = 63/73 (86%), Positives = 66/73 (90%), Gaps = 1/73 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA YSE++ALD L L+RYCCRRMLM HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSERDALDALDLNRYCCRRMLMCHVDLIEKLL 60 Query: 419 NYNTLERA-AQAQ 454 NYNTLER A AQ Sbjct: 61 NYNTLERVDANAQ 73 [7][TOP] >UniRef100_A9SS45 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SS45_PHYPA Length = 73 Score = 130 bits (326), Expect = 7e-29 Identities = 61/67 (91%), Positives = 62/67 (92%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA YSE +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLER Sbjct: 61 NYNTLER 67 [8][TOP] >UniRef100_A4S4C4 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S4C4_OSTLU Length = 71 Score = 129 bits (325), Expect = 9e-29 Identities = 60/71 (84%), Positives = 64/71 (90%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA YSE++ALD LGL+RYCCRRM+M HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSERDALDALGLNRYCCRRMVMCHVDLIEKLL 60 Query: 419 NYNTLERAAQA 451 YNTLER A Sbjct: 61 RYNTLERVDDA 71 [9][TOP] >UniRef100_C6T2Z9 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T2Z9_SOYBN Length = 71 Score = 129 bits (324), Expect = 1e-28 Identities = 59/68 (86%), Positives = 64/68 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQ+ YSE +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTL+++ Sbjct: 61 NYNTLDKS 68 [10][TOP] >UniRef100_Q53LH8 DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q53LH8_ORYSJ Length = 74 Score = 129 bits (323), Expect = 2e-28 Identities = 60/73 (82%), Positives = 63/73 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERAAQAQG 457 NYNTLE+ G Sbjct: 61 NYNTLEKTETTAG 73 [11][TOP] >UniRef100_Q0IPN4 Os12g0180400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0IPN4_ORYSJ Length = 72 Score = 128 bits (322), Expect = 2e-28 Identities = 60/71 (84%), Positives = 63/71 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERAAQA 451 NYNTLE+ A Sbjct: 61 NYNTLEKTETA 71 [12][TOP] >UniRef100_C1FJT8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJT8_9CHLO Length = 69 Score = 127 bits (320), Expect = 3e-28 Identities = 59/67 (88%), Positives = 62/67 (92%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E++ALD L L RYCCRRMLM HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTERDALDALDLHRYCCRRMLMCHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLER Sbjct: 61 NYNTLER 67 [13][TOP] >UniRef100_C0PFY7 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C0PFY7_MAIZE Length = 242 Score = 127 bits (320), Expect = 3e-28 Identities = 60/68 (88%), Positives = 62/68 (91%) Frame = +2 Query: 236 KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 KMIIPVRCFTCGKVIGNKWD YLDLLQA YSE +ALD L L RYCCRRMLMTHVDLIEKL Sbjct: 171 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 230 Query: 416 LNYNTLER 439 LNYNTLE+ Sbjct: 231 LNYNTLEK 238 [14][TOP] >UniRef100_Q9SYA6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Arabidopsis thaliana RepID=RPAB5_ARATH Length = 71 Score = 127 bits (320), Expect = 3e-28 Identities = 57/68 (83%), Positives = 64/68 (94%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCGKVIGNKWDTYL+LLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNT+E++ Sbjct: 61 NYNTMEKS 68 [15][TOP] >UniRef100_B6UDG2 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=1 Tax=Zea mays RepID=B6UDG2_MAIZE Length = 71 Score = 126 bits (316), Expect = 1e-27 Identities = 59/67 (88%), Positives = 61/67 (91%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQA YSE +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDVYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLE+ Sbjct: 61 NYNTLEK 67 [16][TOP] >UniRef100_B9T3C0 DNA-directed RNA polymerase II, subunit n, putative n=1 Tax=Ricinus communis RepID=B9T3C0_RICCO Length = 76 Score = 125 bits (315), Expect = 1e-27 Identities = 60/69 (86%), Positives = 61/69 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA YSE +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERAA 445 NYN AA Sbjct: 61 NYNKYPFAA 69 [17][TOP] >UniRef100_B4FJG4 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=2 Tax=Andropogoneae RepID=B4FJG4_MAIZE Length = 71 Score = 125 bits (315), Expect = 1e-27 Identities = 59/67 (88%), Positives = 61/67 (91%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQA YSE +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLE+ Sbjct: 61 NYNTLEK 67 [18][TOP] >UniRef100_A7QP02 Chromosome chr1 scaffold_135, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QP02_VITVI Length = 78 Score = 124 bits (311), Expect = 4e-27 Identities = 57/64 (89%), Positives = 60/64 (93%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWDTYLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNT 430 NYN+ Sbjct: 61 NYNS 64 [19][TOP] >UniRef100_Q39290 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Brassica napus RepID=RPAB5_BRANA Length = 71 Score = 124 bits (311), Expect = 4e-27 Identities = 57/68 (83%), Positives = 61/68 (89%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQ Y+E +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTLE++ Sbjct: 61 NYNTLEKS 68 [20][TOP] >UniRef100_B9G9U1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9G9U1_ORYSJ Length = 74 Score = 124 bits (310), Expect = 5e-27 Identities = 59/73 (80%), Positives = 62/73 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNK D YLDLLQA Y+E +ALD LGL RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKGDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERAAQAQG 457 NYNTLE+ G Sbjct: 61 NYNTLEKTETTAG 73 [21][TOP] >UniRef100_Q8LFJ6 RNA polymerase II subunit (HsRPB10), putative n=1 Tax=Arabidopsis thaliana RepID=Q8LFJ6_ARATH Length = 71 Score = 123 bits (308), Expect = 8e-27 Identities = 57/68 (83%), Positives = 61/68 (89%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQ Y+E +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDYTEGDALDALQLVRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLERA 442 NYNTLE++ Sbjct: 61 NYNTLEKS 68 [22][TOP] >UniRef100_B7FTZ0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTZ0_PHATR Length = 73 Score = 122 bits (306), Expect = 1e-26 Identities = 57/73 (78%), Positives = 61/73 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKW+TYL LLQA YSE +ALD LGL RYCCRRML+THVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLSLLQADYSEGDALDELGLKRYCCRRMLLTHVDLIEKLL 60 Query: 419 NYNTLERAAQAQG 457 NYNT +G Sbjct: 61 NYNTESSDVAVEG 73 [23][TOP] >UniRef100_C5Y6P3 Putative uncharacterized protein Sb05g005840 n=1 Tax=Sorghum bicolor RepID=C5Y6P3_SORBI Length = 73 Score = 120 bits (302), Expect = 4e-26 Identities = 54/67 (80%), Positives = 61/67 (91%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIG+KWD YL+L+QA Y E++AL L L+RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGDKWDAYLELVQADYDEEDALTALNLNRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYNTLE+ Sbjct: 61 NYNTLEK 67 [24][TOP] >UniRef100_B8C402 DNA directed RNA polymerase II subunit, 8.2kDa, rpb10-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C402_THAPS Length = 64 Score = 119 bits (299), Expect = 9e-26 Identities = 55/64 (85%), Positives = 59/64 (92%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKW+TYL LLQA YSE +ALD LGL RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLYLLQADYSEGDALDELGLRRYCCRRMMLTHVDLIEKLL 60 Query: 419 NYNT 430 NYNT Sbjct: 61 NYNT 64 [25][TOP] >UniRef100_B6TZT5 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=1 Tax=Zea mays RepID=B6TZT5_MAIZE Length = 84 Score = 119 bits (299), Expect = 9e-26 Identities = 56/63 (88%), Positives = 57/63 (90%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YLDLLQA YSE +ALD L L RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYN 427 NYN Sbjct: 61 NYN 63 [26][TOP] >UniRef100_C5KAN5 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAN5_9ALVE Length = 69 Score = 119 bits (298), Expect = 1e-25 Identities = 54/67 (80%), Positives = 60/67 (89%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKWDTYL+LLQ G SE +AL LG+ RYCCRRML+THVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWDTYLNLLQEGKSEGQALTELGMERYCCRRMLLTHVDLIEKLL 60 Query: 419 NYNTLER 439 NYN LE+ Sbjct: 61 NYNILEK 67 [27][TOP] >UniRef100_C3Y645 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y645_BRAFL Length = 68 Score = 117 bits (292), Expect = 6e-25 Identities = 53/68 (77%), Positives = 60/68 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWEWYLGLLQADYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLERA 442 NY LE+A Sbjct: 61 NYAPLEKA 68 [28][TOP] >UniRef100_UPI0001926189 PREDICTED: similar to DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Hydra magnipapillata RepID=UPI0001926189 Length = 67 Score = 116 bits (291), Expect = 8e-25 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+GNKW++YL LLQA YSE +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWESYLGLLQAEYSEGDALDSLGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [29][TOP] >UniRef100_UPI0000E48653 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48653 Length = 67 Score = 116 bits (291), Expect = 8e-25 Identities = 53/67 (79%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKV+GNKW+ YL LLQA YSE +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVVGNKWEAYLGLLQAEYSEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [30][TOP] >UniRef100_B3RID1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RID1_TRIAD Length = 67 Score = 116 bits (291), Expect = 8e-25 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWEAYLHLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYTPLEK 67 [31][TOP] >UniRef100_Q1ECU1 MGC146599 protein n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q1ECU1_XENTR Length = 67 Score = 115 bits (289), Expect = 1e-24 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKV+GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [32][TOP] >UniRef100_A5D6S6 Zgc:112305 protein n=2 Tax=Clupeocephala RepID=A5D6S6_DANRE Length = 67 Score = 115 bits (288), Expect = 2e-24 Identities = 51/67 (76%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [33][TOP] >UniRef100_B4NL38 GK14032 n=1 Tax=Drosophila willistoni RepID=B4NL38_DROWI Length = 67 Score = 115 bits (288), Expect = 2e-24 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKW++YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQADYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [34][TOP] >UniRef100_A7SLP4 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SLP4_NEMVE Length = 67 Score = 115 bits (288), Expect = 2e-24 Identities = 51/67 (76%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [35][TOP] >UniRef100_UPI00015B63F1 RNA polymerase II subunit 10 n=1 Tax=Nasonia vitripennis RepID=UPI00015B63F1 Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 53/67 (79%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWEAYLGLLQAEYTEGDALDSLGLKRYCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [36][TOP] >UniRef100_UPI0000022BA0 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Mus musculus RepID=UPI0000022BA0 Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAKYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [37][TOP] >UniRef100_UPI0001B7C0A8 Ab1-108. n=1 Tax=Rattus norvegicus RepID=UPI0001B7C0A8 Length = 331 Score = 115 bits (287), Expect = 2e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 265 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 324 Query: 419 NYNTLER 439 NY LE+ Sbjct: 325 NYAPLEK 331 [38][TOP] >UniRef100_UPI000001372F UPI000001372F related cluster n=1 Tax=Takifugu rubripes RepID=UPI000001372F Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 50/67 (74%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [39][TOP] >UniRef100_Q7TPA2 Ab1-108 n=1 Tax=Rattus norvegicus RepID=Q7TPA2_RAT Length = 323 Score = 115 bits (287), Expect = 2e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 257 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 316 Query: 419 NYNTLER 439 NY LE+ Sbjct: 317 NYAPLEK 323 [40][TOP] >UniRef100_B0WG50 DNA-directed RNA polymerase II 7.6 kDa polypeptide n=5 Tax=Arthropoda RepID=B0WG50_CULQU Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 53/67 (79%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [41][TOP] >UniRef100_Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=11 Tax=Drosophila RepID=RPAB5_DROME Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKW++YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [42][TOP] >UniRef100_P62875 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=11 Tax=Euteleostomi RepID=RPAB5_HUMAN Length = 67 Score = 115 bits (287), Expect = 2e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [43][TOP] >UniRef100_UPI00006A4791 PREDICTED: similar to MGC146599 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A4791 Length = 67 Score = 114 bits (286), Expect = 3e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+GNKWD YL LLQ Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWDKYLGLLQQEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [44][TOP] >UniRef100_Q502D4 Zgc:112305 protein n=1 Tax=Danio rerio RepID=Q502D4_DANRE Length = 67 Score = 114 bits (286), Expect = 3e-24 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLPHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [45][TOP] >UniRef100_Q9GR61 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=2 Tax=Caenorhabditis RepID=RPAB5_CAEEL Length = 67 Score = 114 bits (286), Expect = 3e-24 Identities = 51/67 (76%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIG+KW+TYL LQ+ YSE +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY+ LE+ Sbjct: 61 NYHPLEK 67 [46][TOP] >UniRef100_B5FYX8 Putative DNA directed RNA polymerase II polypeptide L variant 1 n=1 Tax=Taeniopygia guttata RepID=B5FYX8_TAEGU Length = 67 Score = 114 bits (284), Expect = 5e-24 Identities = 50/67 (74%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E +ALD LGL RYCCR+ML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRKMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [47][TOP] >UniRef100_Q4SI58 Chromosome 5 SCAF14581, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SI58_TETNG Length = 67 Score = 113 bits (283), Expect = 7e-24 Identities = 49/67 (73%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK++GNKW+ YL LLQ+ Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIVGNKWEAYLRLLQSEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [48][TOP] >UniRef100_C4PZC4 DNA-directed rna polymerase II, subunit n, putative n=2 Tax=Schistosoma RepID=C4PZC4_SCHMA Length = 67 Score = 113 bits (282), Expect = 9e-24 Identities = 49/67 (73%), Positives = 61/67 (91%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+G+KW++Y+ LLQA Y+E +ALD LGL RYCCRRML++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGDKWESYIGLLQAEYAEGDALDTLGLRRYCCRRMLLSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY+ L+R Sbjct: 61 NYSPLQR 67 [49][TOP] >UniRef100_UPI0001791AD9 PREDICTED: similar to DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (RPB10) n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791AD9 Length = 67 Score = 112 bits (281), Expect = 1e-23 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVI NKW++YL LLQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIANKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [50][TOP] >UniRef100_Q55AB6 DNA-directed RNA polymerases I, II, and III subunit rpabc5 n=1 Tax=Dictyostelium discoideum RepID=RPAB5_DICDI Length = 70 Score = 112 bits (281), Expect = 1e-23 Identities = 52/65 (80%), Positives = 55/65 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGNKWD YL LLQ Y+E +ALD L L RYCCRRML+THVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLSLLQIDYTEGDALDALCLKRYCCRRMLLTHVDLIEKLL 60 Query: 419 NYNTL 433 NY L Sbjct: 61 NYTPL 65 [51][TOP] >UniRef100_B5XBF2 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Salmo salar RepID=B5XBF2_SALSA Length = 67 Score = 112 bits (280), Expect = 1e-23 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LQA Y+E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGPLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [52][TOP] >UniRef100_A8ND17 DNA-directed RNA polymerase II 7.6 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8ND17_BRUMA Length = 67 Score = 112 bits (280), Expect = 1e-23 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIGNKWD YL LLQA YSE +ALD L L RYCCRRML++HVDLI KLL Sbjct: 1 MIIPIRCFTCGKVIGNKWDAYLGLLQAEYSEGDALDALNLRRYCCRRMLLSHVDLIVKLL 60 Query: 419 NYNTLER 439 +Y+ LE+ Sbjct: 61 DYHPLEK 67 [53][TOP] >UniRef100_A9BK30 Rpb10 n=1 Tax=Cryptophyta RepID=A9BK30_9CRYP Length = 80 Score = 112 bits (279), Expect = 2e-23 Identities = 50/69 (72%), Positives = 57/69 (82%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK+IGNKWD Y++LL S+ ALD LGL RYCCRRML+THVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIIGNKWDIYIELLNKNISQSAALDSLGLRRYCCRRMLLTHVDLIEKLL 60 Query: 419 NYNTLERAA 445 YNT E+ A Sbjct: 61 AYNTHEKDA 69 [54][TOP] >UniRef100_Q8MPD0 Putative RNA polymerase subunit n=1 Tax=Taenia solium RepID=Q8MPD0_TAESO Length = 67 Score = 110 bits (275), Expect = 6e-23 Identities = 48/67 (71%), Positives = 60/67 (89%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+G+KW++YL LLQA Y+E +ALD LGL RYCCRRM+++HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGDKWESYLVLLQAEYTEADALDTLGLRRYCCRRMILSHVDLIEKLL 60 Query: 419 NYNTLER 439 NY L++ Sbjct: 61 NYAPLQK 67 [55][TOP] >UniRef100_C1BQB9 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Caligus rogercresseyi RepID=C1BQB9_9MAXI Length = 67 Score = 110 bits (275), Expect = 6e-23 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK+IGNKW+ YL LLQA Y+E +ALD LGL R CCRRML+ HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKLIGNKWEAYLGLLQAEYTEGDALDALGLKRPCCRRMLLGHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYTPLEK 67 [56][TOP] >UniRef100_Q98S56 Putative RNA polymerase II subunit Rpb10 n=1 Tax=Guillardia theta RepID=Q98S56_GUITH Length = 71 Score = 110 bits (274), Expect = 7e-23 Identities = 49/63 (77%), Positives = 53/63 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK+IGNKW+ YL LL YSE ALD LGL RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIIGNKWEIYLRLLNENYSESSALDTLGLQRYCCRRMILTHVDLIEKLL 60 Query: 419 NYN 427 YN Sbjct: 61 QYN 63 [57][TOP] >UniRef100_A4UHB3 DNA-directed RNA polymerase n=1 Tax=Alexandrium fundyense RepID=A4UHB3_ALEFU Length = 82 Score = 110 bits (274), Expect = 7e-23 Identities = 46/67 (68%), Positives = 59/67 (88%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RC++CGK+IGNKW+ YL +LQ+ SE+E LD LGL+RYCCRRML+THVDLIEK++ Sbjct: 1 MIIPIRCYSCGKLIGNKWERYLQMLQSEMSEKEVLDALGLNRYCCRRMLLTHVDLIEKVM 60 Query: 419 NYNTLER 439 NYN E+ Sbjct: 61 NYNIYEK 67 [58][TOP] >UniRef100_B6JYU5 DNA-directed RNA polymerase I n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JYU5_SCHJY Length = 71 Score = 110 bits (274), Expect = 7e-23 Identities = 51/67 (76%), Positives = 57/67 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIG+KWDTYL LLQ +E EALD LGL RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN L + Sbjct: 61 CYNPLSK 67 [59][TOP] >UniRef100_UPI000021E311 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI000021E311 Length = 67 Score = 109 bits (273), Expect = 9e-23 Identities = 49/67 (73%), Positives = 56/67 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ YL LLQA Y+E ALD LGL YCCRR+L+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGHALDALGLKCYCCRRVLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [60][TOP] >UniRef100_O13877 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Schizosaccharomyces pombe RepID=RPAB5_SCHPO Length = 71 Score = 109 bits (273), Expect = 9e-23 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCF+CGKVIG+KWDTYL LLQ +E EALD LGL RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPIRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN L + Sbjct: 61 CYNPLSK 67 [61][TOP] >UniRef100_B8BNG5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8BNG5_ORYSI Length = 114 Score = 108 bits (269), Expect = 3e-22 Identities = 60/113 (53%), Positives = 63/113 (55%), Gaps = 42/113 (37%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ---------------------------- 334 MIIPVRCFTCGKVIGNKWD YLDLLQA Y+E Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGR 60 Query: 335 --------------EALDGLGLSRYCCRRMLMTHVDLIEKLLNYNTLERAAQA 451 +ALD LGL RYCCRRMLMTHVDLIEKLLNYNTLE+ A Sbjct: 61 RLADGDADLSVHMWDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETA 113 [62][TOP] >UniRef100_Q5KMS2 DNA-directed RNA polymerases i, ii, and iii 8.3 kDa polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KMS2_CRYNE Length = 69 Score = 108 bits (269), Expect = 3e-22 Identities = 50/67 (74%), Positives = 56/67 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIGN WD+YL+LL AG E EA+D L L RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGNLWDSYLELLAAGVDEGEAMDKLQLKRYCCRRMVLTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN L R Sbjct: 61 MYNPLAR 67 [63][TOP] >UniRef100_B5FVB1 YALI0B04851p n=1 Tax=Yarrowia lipolytica RepID=B5FVB1_YARLI Length = 105 Score = 107 bits (266), Expect = 6e-22 Identities = 48/67 (71%), Positives = 56/67 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+KW+TYL LQ SE +ALD L L RYCCRRM++THVDLIEK L Sbjct: 35 MIIPVRCFSCGKVVGDKWETYLTYLQDDMSEGDALDKLELKRYCCRRMILTHVDLIEKFL 94 Query: 419 NYNTLER 439 YNTLE+ Sbjct: 95 RYNTLEK 101 [64][TOP] >UniRef100_UPI0000DA42E6 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI0000DA42E6 Length = 67 Score = 105 bits (262), Expect = 2e-21 Identities = 48/67 (71%), Positives = 55/67 (82%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFT GK++GNKW+ YL LLQA Y+E ALD LGL YCCRR+L+ HVDLIEKLL Sbjct: 1 MIIPVRCFTWGKIVGNKWEAYLGLLQAEYTEGHALDALGLKCYCCRRVLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [65][TOP] >UniRef100_C4R009 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III n=1 Tax=Pichia pastoris GS115 RepID=C4R009_PICPG Length = 72 Score = 105 bits (262), Expect = 2e-21 Identities = 47/67 (70%), Positives = 55/67 (82%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+KWD YL LL+ G E +ALD L L RYCCRRM++THVDLIEK L Sbjct: 1 MIIPVRCFSCGKVVGDKWDAYLRLLEEGKQEGDALDELKLKRYCCRRMVLTHVDLIEKFL 60 Query: 419 NYNTLER 439 YN LE+ Sbjct: 61 RYNPLEK 67 [66][TOP] >UniRef100_B0DBE9 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DBE9_LACBS Length = 75 Score = 105 bits (262), Expect = 2e-21 Identities = 48/67 (71%), Positives = 56/67 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIG+KW YL+LL SE +ALD L L RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWSAYLELLAKDVSEGDALDELQLKRYCCRRMVLTHVDLIEKLL 60 Query: 419 NYNTLER 439 +YN +ER Sbjct: 61 HYNPMER 67 [67][TOP] >UniRef100_UPI0000DA24CB PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI0000DA24CB Length = 67 Score = 103 bits (258), Expect = 5e-21 Identities = 48/67 (71%), Positives = 54/67 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPV CFTCGK+IGNKW+ YL LLQA Y+E +ALD L L RYCCR ML+ H DLIEKLL Sbjct: 1 MIIPVCCFTCGKIIGNKWEAYLGLLQAMYTEGDALDTLDLKRYCCRCMLLAHADLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYALLEK 67 [68][TOP] >UniRef100_UPI0000022F74 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Mus musculus RepID=UPI0000022F74 Length = 67 Score = 103 bits (258), Expect = 5e-21 Identities = 48/67 (71%), Positives = 54/67 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF CGK +GNK + YL LLQA Y+E +ALD LGL RYCCRR L+ HVDLIEKLL Sbjct: 1 MIIPVRCFICGKTVGNKREAYLGLLQAEYTEGDALDALGLKRYCCRRTLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [69][TOP] >UniRef100_A0D0A0 Chromosome undetermined scaffold_33, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D0A0_PARTE Length = 68 Score = 103 bits (257), Expect = 7e-21 Identities = 45/63 (71%), Positives = 53/63 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+G+ W Y+ LLQ G + EALD LGL RYCCRRM++THVDLI+KLL Sbjct: 1 MIIPIRCFTCGKVVGHLWSDYVQLLQDGVTTGEALDRLGLERYCCRRMILTHVDLIDKLL 60 Query: 419 NYN 427 NYN Sbjct: 61 NYN 63 [70][TOP] >UniRef100_Q0UIS5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UIS5_PHANO Length = 77 Score = 103 bits (257), Expect = 7e-21 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+P+RCF+CGKV+G+ W+ Y+DLL +E +ALD +GL RYCCRRM++THVDLIEKLL Sbjct: 1 MIVPIRCFSCGKVVGDLWEKYMDLLTEEMAEGDALDAIGLQRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNTLER-AAQAQGAQR 466 YN ER A+A A R Sbjct: 61 KYNASEREQARAMRAGR 77 [71][TOP] >UniRef100_C5M2J2 DNA-directed RNA polymerases II subunit n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M2J2_CANTT Length = 72 Score = 103 bits (257), Expect = 7e-21 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ-AGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+KW+TYL+LLQ SE +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLELLQDETISEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LER Sbjct: 61 LRYNPLER 68 [72][TOP] >UniRef100_C1GGT3 DNA-directed RNA polymerases N/8 kDa subunit superfamily protein n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GGT3_PARBD Length = 173 Score = 103 bits (256), Expect = 9e-21 Identities = 47/70 (67%), Positives = 54/70 (77%) Frame = +2 Query: 230 R*KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIE 409 R MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRMLMTHVDLIE Sbjct: 97 RFNMIIPVRCFSCGKVVGDLWERYLKLLDEGVPDGDAMDQLGCKRYCCRRMLMTHVDLIE 156 Query: 410 KLLNYNTLER 439 KLL YN ER Sbjct: 157 KLLRYNPAER 166 [73][TOP] >UniRef100_C0SH45 DNA-directed RNA polymerases I/II/III subunit 10 n=4 Tax=Onygenales RepID=C0SH45_PARBP Length = 74 Score = 102 bits (255), Expect = 1e-20 Identities = 46/67 (68%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLKLLDEGVPDGDAMDQLGCKRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 RYNPAER 67 [74][TOP] >UniRef100_B2WEA7 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WEA7_PYRTR Length = 77 Score = 102 bits (255), Expect = 1e-20 Identities = 46/75 (61%), Positives = 59/75 (78%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+P+RCF+CGKV G+ W+ Y++LL G E +ALD +GL RYCCRRM++THVDLIEKLL Sbjct: 1 MIVPIRCFSCGKVTGDLWEKYMNLLSDGAEEADALDAVGLQRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNTLERAAQAQGAQ 463 YN ER QA+ A+ Sbjct: 61 KYNASER-EQARAAR 74 [75][TOP] >UniRef100_A0DC00 Chromosome undetermined scaffold_45, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DC00_PARTE Length = 68 Score = 102 bits (254), Expect = 2e-20 Identities = 44/63 (69%), Positives = 53/63 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKV+G+ W Y+ LLQ G + E+LD LGL RYCCRRM++THVDLI+KLL Sbjct: 1 MIIPIRCFTCGKVVGHLWSDYVQLLQDGVTTGESLDRLGLERYCCRRMILTHVDLIDKLL 60 Query: 419 NYN 427 NYN Sbjct: 61 NYN 63 [76][TOP] >UniRef100_B6QUX0 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QUX0_PENMQ Length = 74 Score = 102 bits (254), Expect = 2e-20 Identities = 45/67 (67%), Positives = 54/67 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDEGVPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN+ ER Sbjct: 61 RYNSSER 67 [77][TOP] >UniRef100_A1CFY2 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=2 Tax=Trichocomaceae RepID=A1CFY2_ASPCL Length = 74 Score = 102 bits (254), Expect = 2e-20 Identities = 45/67 (67%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDEGIPDGDAMDQLGCKRYCCRRMIMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 RYNPAER 67 [78][TOP] >UniRef100_B6AD79 DNA-directed RNA polymerases I, II, and III subunit ABC5, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AD79_9CRYT Length = 72 Score = 102 bits (253), Expect = 2e-20 Identities = 49/67 (73%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGN W +L LLQ SE EALD LGL RYCCRRM++TH DLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNLWQQWLVLLQNDVSEGEALDKLGLRRYCCRRMVLTHADLIEKLL 60 Query: 419 NYNTLER 439 YN E+ Sbjct: 61 AYNIHEK 67 [79][TOP] >UniRef100_C8VH91 DNA-directed RNA polymerases N/8 kDa subunit superfamily (AFU_orthologue; AFUA_7G02620) n=1 Tax=Aspergillus nidulans FGSC A4 RepID=C8VH91_EMENI Length = 74 Score = 102 bits (253), Expect = 2e-20 Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 1/73 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGIPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 419 NYNTLER-AAQAQ 454 YN ER A+AQ Sbjct: 61 RYNPTERDRAKAQ 73 [80][TOP] >UniRef100_C5G068 DNA-directed RNA polymerase N/8 kDa subunit n=1 Tax=Microsporum canis CBS 113480 RepID=C5G068_NANOT Length = 74 Score = 102 bits (253), Expect = 2e-20 Identities = 46/67 (68%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLRLLDDGVPDGDAMDQLGCKRYCCRRMLMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 RYNPAER 67 [81][TOP] >UniRef100_B8MTW2 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MTW2_TALSN Length = 74 Score = 102 bits (253), Expect = 2e-20 Identities = 45/67 (67%), Positives = 54/67 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGVPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN+ ER Sbjct: 61 RYNSSER 67 [82][TOP] >UniRef100_A3FQL9 Putative DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (Fragment) n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQL9_CRYPV Length = 72 Score = 101 bits (251), Expect = 3e-20 Identities = 48/67 (71%), Positives = 52/67 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIGN W +L LLQ E EALD LGL RYCCRRM++TH DLIEKL+ Sbjct: 1 MIIPVRCFTCGKVIGNLWQPWLVLLQNNVPEGEALDKLGLRRYCCRRMILTHADLIEKLM 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 AYNIHER 67 [83][TOP] >UniRef100_Q4P3X6 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P3X6_USTMA Length = 155 Score = 101 bits (251), Expect = 3e-20 Identities = 47/64 (73%), Positives = 54/64 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIG+KW+ YL LL G +E EAL L L RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWNAYLALLLDGRTEGEALTELDLKRYCCRRMVLTHVDLIEKLL 60 Query: 419 NYNT 430 +YNT Sbjct: 61 HYNT 64 [84][TOP] >UniRef100_C4YHE9 DNA-directed RNA polymerases I/II/III subunit 10 n=2 Tax=Candida RepID=C4YHE9_CANAL Length = 72 Score = 101 bits (251), Expect = 3e-20 Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ-AGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+KW TYLD LQ SE +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWQTYLDYLQDETLSEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [85][TOP] >UniRef100_B6HKG6 Pc21g11480 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HKG6_PENCW Length = 74 Score = 101 bits (251), Expect = 3e-20 Identities = 44/67 (65%), Positives = 54/67 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGVPDGDAMDQLGCRRYCCRRMIMTHVDLIEKLL 60 Query: 419 NYNTLER 439 YN+ E+ Sbjct: 61 RYNSAEK 67 [86][TOP] >UniRef100_A8N985 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N985_COPC7 Length = 478 Score = 101 bits (251), Expect = 3e-20 Identities = 46/63 (73%), Positives = 54/63 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIG+KW+ YL+LL SE +ALD L L RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWNPYLELLAKDMSEGDALDELQLKRYCCRRMVLTHVDLIEKLL 60 Query: 419 NYN 427 +YN Sbjct: 61 HYN 63 [87][TOP] >UniRef100_UPI000194C523 PREDICTED: similar to Ab1-108 n=1 Tax=Taeniopygia guttata RepID=UPI000194C523 Length = 67 Score = 100 bits (250), Expect = 4e-20 Identities = 44/67 (65%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK++GNKW+ +L + + +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAFLGSCRRSTRKGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [88][TOP] >UniRef100_Q3LWJ6 RNA polymerase II subunit RPB10 n=1 Tax=Bigelowiella natans RepID=Q3LWJ6_BIGNA Length = 65 Score = 100 bits (248), Expect = 7e-20 Identities = 42/65 (64%), Positives = 55/65 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IP+RCF+CGKVI W YL+L++ G+SE E+LD L ++RYCCRRML++HVD+IEKLL Sbjct: 1 MLIPIRCFSCGKVIAGSWLEYLELIKIGFSEGESLDALRMNRYCCRRMLLSHVDIIEKLL 60 Query: 419 NYNTL 433 NYN L Sbjct: 61 NYNLL 65 [89][TOP] >UniRef100_A3GGI8 DNA-directed RNA Polymerase II subunit L n=1 Tax=Pichia stipitis RepID=A3GGI8_PICST Length = 72 Score = 100 bits (248), Expect = 7e-20 Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ-AGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+KW+TYL+ LQ +E +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDESMTEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [90][TOP] >UniRef100_Q4N5Q3 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Theileria parva RepID=Q4N5Q3_THEPA Length = 87 Score = 99.8 bits (247), Expect = 1e-19 Identities = 44/64 (68%), Positives = 55/64 (85%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIG+ W+ +L++L+ E +ALD LGL+RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGHLWEKWLEMLKKDIPEGQALDDLGLTRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNT 430 YN+ Sbjct: 61 VYNS 64 [91][TOP] >UniRef100_Q6BHF3 DEHA2G19052p n=1 Tax=Debaryomyces hansenii RepID=Q6BHF3_DEBHA Length = 72 Score = 99.8 bits (247), Expect = 1e-19 Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIPVRCF+CGKV+G+KW+TYL+ LQ +E +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPVRCFSCGKVVGDKWETYLEYLQDDTMTEGDALDKLKLQRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [92][TOP] >UniRef100_A8PYD2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PYD2_MALGO Length = 83 Score = 99.8 bits (247), Expect = 1e-19 Identities = 46/65 (70%), Positives = 54/65 (83%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKVIG+KWD YL LL G +E EAL L L RYCCRRM++THVDLIE+LL Sbjct: 1 MIIPVRCFSCGKVIGDKWDAYLALLIEGRTEGEALTELQLHRYCCRRMVLTHVDLIERLL 60 Query: 419 NYNTL 433 +YN + Sbjct: 61 HYNNV 65 [93][TOP] >UniRef100_A7AN58 RNA polymerases N / 8 kDa subunit family protein n=1 Tax=Babesia bovis RepID=A7AN58_BABBO Length = 73 Score = 99.4 bits (246), Expect = 1e-19 Identities = 44/70 (62%), Positives = 57/70 (81%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVIG+ W+ +L+LL+ +E +ALD L L+RYCCRRM++THVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGHLWEQWLELLKQNVNEGDALDRLDLTRYCCRRMILTHVDLIEKLL 60 Query: 419 NYNTLERAAQ 448 YN ++ Q Sbjct: 61 VYNIYDKRNQ 70 [94][TOP] >UniRef100_C5DXM4 ZYRO0F06226p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DXM4_ZYGRC Length = 70 Score = 99.4 bits (246), Expect = 1e-19 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW++YL++LQ E AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALTKLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LER Sbjct: 61 LRYNPLER 68 [95][TOP] >UniRef100_A5E442 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Lodderomyces elongisporus RepID=A5E442_LODEL Length = 72 Score = 99.4 bits (246), Expect = 1e-19 Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ-AGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+KW+TYL+ LQ +E +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDETMTEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [96][TOP] >UniRef100_P22139 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=4 Tax=Saccharomyces cerevisiae RepID=RPAB5_YEAST Length = 70 Score = 99.4 bits (246), Expect = 1e-19 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW++YL+LLQ E AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [97][TOP] >UniRef100_UPI00017F02E3 PREDICTED: similar to DNA directed RNA polymerase II polypeptide L n=1 Tax=Sus scrofa RepID=UPI00017F02E3 Length = 67 Score = 99.0 bits (245), Expect = 2e-19 Identities = 42/67 (62%), Positives = 53/67 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M IPV CF CGK++ N W+ YL LLQA Y+E++ALD LGL +YCCR ML+ ++DLIEKLL Sbjct: 1 MTIPVHCFMCGKIVSNTWEAYLGLLQAKYTEEDALDALGLKQYCCRHMLLAYMDLIEKLL 60 Query: 419 NYNTLER 439 NY LE+ Sbjct: 61 NYAPLEK 67 [98][TOP] >UniRef100_A7TKR3 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TKR3_VANPO Length = 70 Score = 99.0 bits (245), Expect = 2e-19 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW++YL++LQ E AL LGL+RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALSRLGLTRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [99][TOP] >UniRef100_A6RMH2 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RMH2_BOTFB Length = 76 Score = 99.0 bits (245), Expect = 2e-19 Identities = 44/70 (62%), Positives = 55/70 (78%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV G+ W+ Y+ L+ G ++ +A+D L L RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVTGDIWERYVKLIDEGVNDGDAMDELTLKRYCCRRMIMTHVDLIEKLL 60 Query: 419 NYNTLERAAQ 448 YN ER A+ Sbjct: 61 RYNPAERDAK 70 [100][TOP] >UniRef100_A5DLA1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DLA1_PICGU Length = 72 Score = 99.0 bits (245), Expect = 2e-19 Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+KW+TYL+ LQ +E +ALD L L RYCCRRM++THVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDDTMTEGDALDKLKLRRYCCRRMVLTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [101][TOP] >UniRef100_A4RLD2 DNA-directed RNA polymerase II chain RPB10, putative n=1 Tax=Magnaporthe grisea RepID=A4RLD2_MAGGR Length = 78 Score = 99.0 bits (245), Expect = 2e-19 Identities = 41/64 (64%), Positives = 54/64 (84%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCF+CGKV G+ W+ +L+L+ +G S+ +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPIRCFSCGKVTGDLWERFLNLIDSGMSDGDAMDALGCKRYCCRRMIMTHVDLIEKLL 60 Query: 419 NYNT 430 Y+T Sbjct: 61 KYST 64 [102][TOP] >UniRef100_B4UN44 Similar to uniprot|P22139 Saccharomyces cerevisiae YOR210w RPB10 n=1 Tax=Candida glabrata RepID=B4UN44_CANGA Length = 70 Score = 98.6 bits (244), Expect = 2e-19 Identities = 44/68 (64%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW++YL++LQ E AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [103][TOP] >UniRef100_C5DEV5 KLTH0D10076p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEV5_LACTC Length = 70 Score = 98.2 bits (243), Expect = 3e-19 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW+ YL++LQ E AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [104][TOP] >UniRef100_Q6CRT0 KLLA0D06699p n=1 Tax=Kluyveromyces lactis RepID=Q6CRT0_KLULA Length = 70 Score = 97.8 bits (242), Expect = 4e-19 Identities = 44/68 (64%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ-EALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW+ YL++LQ E+ AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEEELEEGTALTRLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [105][TOP] >UniRef100_Q75BV8 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Eremothecium gossypii RepID=RPAB5_ASHGO Length = 70 Score = 97.8 bits (242), Expect = 4e-19 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MI+PVRCF+CGKV+G+KW+ YL++LQ E AL LGL RYCCRRM++THVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEEELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 416 LNYNTLER 439 L YN LE+ Sbjct: 61 LRYNPLEK 68 [106][TOP] >UniRef100_C9SH58 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SH58_9PEZI Length = 76 Score = 96.7 bits (239), Expect = 8e-19 Identities = 42/62 (67%), Positives = 51/62 (82%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV G+ W+ YL L+ G ++ +A+D LGL RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVTGDLWERYLKLIDDGIADGDAMDELGLKRYCCRRMIMTHVDLIEKLL 60 Query: 419 NY 424 Y Sbjct: 61 KY 62 [107][TOP] >UniRef100_B0YC71 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=2 Tax=Aspergillus fumigatus RepID=B0YC71_ASPFC Length = 140 Score = 96.7 bits (239), Expect = 8e-19 Identities = 42/62 (67%), Positives = 50/62 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+CGKV+G+ W+ YL LL G + +A+D LG RYCCRRM+MTHVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGIPDGDAMDQLGCKRYCCRRMIMTHVDLIEKLL 60 Query: 419 NY 424 Y Sbjct: 61 RY 62 [108][TOP] >UniRef100_UPI000187D34F hypothetical protein MPER_07033 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187D34F Length = 70 Score = 95.9 bits (237), Expect = 1e-18 Identities = 43/58 (74%), Positives = 50/58 (86%) Frame = +2 Query: 254 RCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLNYN 427 RCFTCGKVIG+KW+TYLDLL +E +ALD L L RYCCRRM++THVDLIEKLL+YN Sbjct: 1 RCFTCGKVIGDKWNTYLDLLAKDIAEGDALDELQLRRYCCRRMVLTHVDLIEKLLHYN 58 [109][TOP] >UniRef100_B6KU00 DNA-directed RNA polymerase II, 8.2 kDa polypeptide, putative n=3 Tax=Toxoplasma gondii RepID=B6KU00_TOXGO Length = 72 Score = 95.9 bits (237), Expect = 1e-18 Identities = 42/67 (62%), Positives = 52/67 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGKVI + W+ ++D++ E EALD LGL RYCCRRML+TH DLI+KLL Sbjct: 1 MIIPIRCFTCGKVIAHLWEKWIDMIDEDRPEGEALDILGLDRYCCRRMLLTHADLIDKLL 60 Query: 419 NYNTLER 439 YN E+ Sbjct: 61 AYNIYEK 67 [110][TOP] >UniRef100_Q4XQK0 DNA-directed RNA polymerase 2 8.2 kDa polypeptide, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4XQK0_PLACH Length = 69 Score = 95.1 bits (235), Expect = 2e-18 Identities = 43/67 (64%), Positives = 51/67 (76%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK+IGN W Y L G S+ +ALD L LSRYCCRRM++TH D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLYEKKLDEGISKCDALDELNLSRYCCRRMMLTHADMMDKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 CYNIYER 67 [111][TOP] >UniRef100_B3KZ26 DNA-directed RNA polymerase 2, 8.2 kDa polypeptide, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3KZ26_PLAKH Length = 69 Score = 94.7 bits (234), Expect = 3e-18 Identities = 42/67 (62%), Positives = 52/67 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK+IGN W Y L+ G S+ +ALD L L+RYCCRRM++TH D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLYEKKLEEGVSKCDALDELNLTRYCCRRMILTHADMMDKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 CYNIYER 67 [112][TOP] >UniRef100_Q4YSS8 Putative uncharacterized protein n=1 Tax=Plasmodium berghei RepID=Q4YSS8_PLABE Length = 68 Score = 92.8 bits (229), Expect = 1e-17 Identities = 43/67 (64%), Positives = 52/67 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK+IGN W Y + L G S+ +ALD L LSRYCCRRM++TH D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLY-EKLDEGISKCDALDELNLSRYCCRRMMLTHADMMDKLL 59 Query: 419 NYNTLER 439 YN ER Sbjct: 60 CYNIYER 66 [113][TOP] >UniRef100_Q8IC08 DNA-directed RNA polymerase 2 8.2 kDa polypeptide, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IC08_PLAF7 Length = 69 Score = 92.0 bits (227), Expect = 2e-17 Identities = 41/67 (61%), Positives = 51/67 (76%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK+IGN W Y L+ G S+ +AL+ L L RYCCRRM++TH D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSVYEKKLEEGLSKCDALNELNLYRYCCRRMILTHADMMDKLL 60 Query: 419 NYNTLER 439 YN ER Sbjct: 61 CYNIYER 67 [114][TOP] >UniRef100_Q7SG15 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Neurospora crassa RepID=Q7SG15_NEUCR Length = 84 Score = 91.7 bits (226), Expect = 3e-17 Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV+G+ W+ YL L+ ++ +ALD LGL RYCCRRM+MTHVDLIEKL Sbjct: 1 MIIPIRCFSCGKVVGDLWERYLQLIDGEEITDGDALDQLGLKRYCCRRMVMTHVDLIEKL 60 Query: 416 LNY 424 L Y Sbjct: 61 LKY 63 [115][TOP] >UniRef100_B2AA22 Predicted CDS Pa_1_2560 n=1 Tax=Podospora anserina RepID=B2AA22_PODAN Length = 82 Score = 90.9 bits (224), Expect = 5e-17 Identities = 41/63 (65%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ-AGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIPVRCF+CGKV+G+ W+ ++ L++ G ++ EALD LG RYCCRRM+MTHVDLIEKL Sbjct: 1 MIIPVRCFSCGKVVGDLWEKFVVLIEDRGLADGEALDELGCKRYCCRRMVMTHVDLIEKL 60 Query: 416 LNY 424 L Y Sbjct: 61 LKY 63 [116][TOP] >UniRef100_Q2HDK3 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HDK3_CHAGB Length = 82 Score = 90.5 bits (223), Expect = 6e-17 Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 1/80 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQA-GYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCF+CGKV G+ W+ ++ L++ G S+ +ALD LG RYCCRRM+MTHVDLIEKL Sbjct: 1 MIIPIRCFSCGKVTGDLWEKFVKLIEEDGLSDGDALDQLGCKRYCCRRMVMTHVDLIEKL 60 Query: 416 LNYNTLERAAQAQGAQRTGQ 475 L Y R + Q+T Q Sbjct: 61 LKYTPDGRNYKKIEMQQTHQ 80 [117][TOP] >UniRef100_A8BAL6 DNA-directed RNA polymerase RPB10 n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8BAL6_GIALA Length = 122 Score = 90.1 bits (222), Expect = 8e-17 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 10/92 (10%) Frame = +2 Query: 206 LAGPAAPGR*K-MIIPVRCFTCGKVIGNKWDTYLDLL------QAGYSE---QEALDGLG 355 ++G A P K MIIPVRCFTCGKVIG+ ++ YL LL ++G SE + ALD LG Sbjct: 27 VSGRAIPMHQKIMIIPVRCFTCGKVIGSLYEKYLKLLGEYGAEESGSSETPAKRALDELG 86 Query: 356 LSRYCCRRMLMTHVDLIEKLLNYNTLERAAQA 451 L+RYCCRRML+THVDLI+ LL Y R A+A Sbjct: 87 LTRYCCRRMLLTHVDLIDDLLLYTPKARQARA 118 [118][TOP] >UniRef100_Q8MUU5 RNA polymerase II subunit Rpb10 n=1 Tax=Giardia intestinalis RepID=Q8MUU5_GIALA Length = 84 Score = 89.4 bits (220), Expect = 1e-16 Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 9/80 (11%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLL------QAGYSE---QEALDGLGLSRYCCRRMLMT 391 MIIPVRCFTCGKVIG+ ++ YL LL ++G SE + ALD LGL+RYCCRRML+T Sbjct: 1 MIIPVRCFTCGKVIGSLYEKYLKLLGEYGAEESGSSETPAKRALDELGLTRYCCRRMLLT 60 Query: 392 HVDLIEKLLNYNTLERAAQA 451 HVDLI+ LL Y R A+A Sbjct: 61 HVDLIDDLLLYTPKARQARA 80 [119][TOP] >UniRef100_A4HE74 DNA-directed RNA polymerase ii n=1 Tax=Leishmania braziliensis RepID=A4HE74_LEIBR Length = 84 Score = 88.2 bits (217), Expect = 3e-16 Identities = 37/63 (58%), Positives = 50/63 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRC++CGKV+GN ++ Y LL Y+E EALD L L RYCCRRM+++H+DLI+ L+ Sbjct: 1 MIIPVRCYSCGKVVGNLYEQYQRLLDQDYTESEALDALHLDRYCCRRMILSHIDLIDDLI 60 Query: 419 NYN 427 Y+ Sbjct: 61 PYS 63 [120][TOP] >UniRef100_UPI000150A5EB RNA polymerases N / 8 kDa subunit family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A5EB Length = 73 Score = 87.4 bits (215), Expect = 5e-16 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 4/67 (5%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE----ALDGLGLSRYCCRRMLMTHVDLI 406 MIIPVRCFTCGKV+G+ W+ +L ++ ++ ALD L L+RYCCRRM++TH DLI Sbjct: 1 MIIPVRCFTCGKVVGHMWNDFLQMISESNPNKKDMKSALDELRLNRYCCRRMILTHCDLI 60 Query: 407 EKLLNYN 427 +KLLNYN Sbjct: 61 DKLLNYN 67 [121][TOP] >UniRef100_C6LT42 DNA-directed RNA polymerase RPB10 n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LT42_GIALA Length = 84 Score = 86.3 bits (212), Expect = 1e-15 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 9/80 (11%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE---------ALDGLGLSRYCCRRMLMT 391 MIIPVRCFTCGKV+G+ ++ YL LL +E + ALD LGL+RYCCRRML+T Sbjct: 1 MIIPVRCFTCGKVVGSLYEKYLKLLGEYEAEADGSLETPAKRALDELGLTRYCCRRMLLT 60 Query: 392 HVDLIEKLLNYNTLERAAQA 451 HVDLI+ LL Y R A+A Sbjct: 61 HVDLIDDLLLYTPKARQARA 80 [122][TOP] >UniRef100_Q4D7L7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4D7L7_TRYCR Length = 84 Score = 85.9 bits (211), Expect = 1e-15 Identities = 36/63 (57%), Positives = 50/63 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKVIGN ++TY LL Y+E EAL+ L L R CCRRM+++H+DL++ LL Sbjct: 1 MLIPVRCYSCGKVIGNLYETYQQLLSEDYTEAEALNALQLDRMCCRRMILSHIDLVDDLL 60 Query: 419 NYN 427 Y+ Sbjct: 61 PYS 63 [123][TOP] >UniRef100_Q4DLU2 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DLU2_TRYCR Length = 77 Score = 85.5 bits (210), Expect = 2e-15 Identities = 39/69 (56%), Positives = 48/69 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE+ ALD L R+CCRRM +THVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGVSEEAALDAFNLQRFCCRRMFLTHVDFSDLLL 60 Query: 419 NYNTLERAA 445 +N + A Sbjct: 61 KFNPADTNA 69 [124][TOP] >UniRef100_Q4CMX3 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CMX3_TRYCR Length = 77 Score = 85.5 bits (210), Expect = 2e-15 Identities = 39/69 (56%), Positives = 48/69 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE+ ALD L R+CCRRM +THVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGVSEEAALDAFNLQRFCCRRMFLTHVDFSDLLL 60 Query: 419 NYNTLERAA 445 +N + A Sbjct: 61 KFNPADTNA 69 [125][TOP] >UniRef100_A4H798 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania braziliensis RepID=A4H798_LEIBR Length = 89 Score = 85.5 bits (210), Expect = 2e-15 Identities = 38/77 (49%), Positives = 52/77 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE++A++ L R+CCRRM++THVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNAFHLERFCCRRMMLTHVDMTDLLL 60 Query: 419 NYNTLERAAQAQGAQRT 469 +N + A T Sbjct: 61 KFNPADTNVLGTAAVET 77 [126][TOP] >UniRef100_Q4QG42 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania major RepID=Q4QG42_LEIMA Length = 89 Score = 85.1 bits (209), Expect = 2e-15 Identities = 36/63 (57%), Positives = 49/63 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE++A++ L R+CCRRM++THVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNAFHLERFCCRRMMLTHVDMTDLLL 60 Query: 419 NYN 427 +N Sbjct: 61 KFN 63 [127][TOP] >UniRef100_Q1XEE4 DNA-directed RNA polymerase subunit 2RPB10 n=1 Tax=Trypanosoma brucei brucei RepID=Q1XEE4_TRYBB Length = 71 Score = 85.1 bits (209), Expect = 2e-15 Identities = 39/63 (61%), Positives = 46/63 (73%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE+ ALD L R+CCRRM +THVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGSSEEAALDAFNLWRFCCRRMFLTHVDFSDLLL 60 Query: 419 NYN 427 YN Sbjct: 61 KYN 63 [128][TOP] >UniRef100_Q8SRS6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Encephalitozoon cuniculi RepID=RPAB5_ENCCU Length = 72 Score = 85.1 bits (209), Expect = 2e-15 Identities = 36/70 (51%), Positives = 51/70 (72%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK I +KW+ Y +LL+ + EALD LG+ R CCRRM + HVD+++KLL Sbjct: 1 MIIPIRCFTCGKEISSKWEPYQELLKIDKGKAEALDELGMRRICCRRMFLGHVDIVDKLL 60 Query: 419 NYNTLERAAQ 448 ++ ++ Q Sbjct: 61 KFDIVKDFTQ 70 [129][TOP] >UniRef100_Q4CTY7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CTY7_TRYCR Length = 84 Score = 84.3 bits (207), Expect = 4e-15 Identities = 35/63 (55%), Positives = 50/63 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKVIGN ++ Y LL Y+E EAL+ L L R CCRRM+++H+DL+++LL Sbjct: 1 MLIPVRCYSCGKVIGNLYEKYQQLLSEDYTEAEALNALQLDRMCCRRMILSHIDLVDELL 60 Query: 419 NYN 427 Y+ Sbjct: 61 PYS 63 [130][TOP] >UniRef100_B5IVP8 RNA polymerases N / 8 kDa subunit superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IVP8_9EURY Length = 65 Score = 84.3 bits (207), Expect = 4e-15 Identities = 35/62 (56%), Positives = 49/62 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCGKVIG+K+ + + ++ G ++ LD LGL RYCCRRML+THV+LI+ ++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYIFKERVENGEDPEKVLDDLGLERYCCRRMLLTHVELIDDIM 60 Query: 419 NY 424 Y Sbjct: 61 QY 62 [131][TOP] >UniRef100_O59298 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrococcus horikoshii RepID=RPON_PYRHO Length = 65 Score = 84.3 bits (207), Expect = 4e-15 Identities = 36/62 (58%), Positives = 50/62 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGKVIG+K+ + ++AG ++ LD LGL RYCCRRML++HV+LI+ ++ Sbjct: 1 MIIPVRCFTCGKVIGDKYYEFKRRVEAGEDPEKVLDDLGLERYCCRRMLLSHVELIDDIM 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [132][TOP] >UniRef100_A4HVP0 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania infantum RepID=A4HVP0_LEIIN Length = 89 Score = 84.0 bits (206), Expect = 6e-15 Identities = 36/63 (57%), Positives = 49/63 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG VI +K+ YLDL+ G SE++A++ L R+CCRRM++THVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNVFHLERFCCRRMMLTHVDMTDLLL 60 Query: 419 NYN 427 +N Sbjct: 61 KFN 63 [133][TOP] >UniRef100_P60291 DNA-directed RNA polymerase subunit N n=2 Tax=Pyrococcus RepID=RPON_PYRAB Length = 65 Score = 84.0 bits (206), Expect = 6e-15 Identities = 35/62 (56%), Positives = 50/62 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCGKVIG+K+ + ++AG ++ LD LGL RYCCRRML++HV+LI+ ++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYEFKRRVEAGEDPEKVLDDLGLERYCCRRMLLSHVELIDDIM 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [134][TOP] >UniRef100_Q96YW4 DNA-directed RNA polymerase subunit N n=1 Tax=Sulfolobus tokodaii RepID=RPON_SULTO Length = 66 Score = 83.2 bits (204), Expect = 9e-15 Identities = 32/62 (51%), Positives = 49/62 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCG +IG+KW+ ++ + G + LD LG+ RYCCRRML++HVD+I++++ Sbjct: 1 MIIPIRCFTCGSLIGDKWEPFITRVSNGEDPGKVLDDLGVKRYCCRRMLLSHVDIIKEVI 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [135][TOP] >UniRef100_C8S9N0 RNA polymerase, N/8 Kd subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S9N0_FERPL Length = 72 Score = 82.4 bits (202), Expect = 2e-14 Identities = 35/61 (57%), Positives = 43/61 (70%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 + PVRCFTCG VI +KW+ Y LL G S +EALD LG+ RYCCRRM TH ++E+L Sbjct: 1 MFPVRCFTCGAVIAHKWEEYKRLLSEGKSPREALDSLGIERYCCRRMFFTHKSVVEELAR 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [136][TOP] >UniRef100_Q980Z8 DNA-directed RNA polymerase subunit N n=2 Tax=Sulfolobus solfataricus RepID=RPON_SULSO Length = 66 Score = 82.4 bits (202), Expect = 2e-14 Identities = 31/62 (50%), Positives = 49/62 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IP+RCFTCG +I +KW +++ + AG + + LD LG+ RYCCRRML++HVD+I +++ Sbjct: 1 MLIPIRCFTCGSLIADKWQSFITRVNAGENPGKVLDDLGVKRYCCRRMLLSHVDIINEVI 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [137][TOP] >UniRef100_A2DSN4 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2DSN4_TRIVA Length = 73 Score = 82.0 bits (201), Expect = 2e-14 Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ-EALDGLGLSRYCCRRMLMTHVDLIEKL 415 M+IPVRCFTCG +IG+KW Y+ L++ + EAL+ L L R+CCRRML+THVDL++++ Sbjct: 1 MLIPVRCFTCGAIIGHKWKEYVRLIEEEHMNYTEALNALNLKRFCCRRMLLTHVDLLDRM 60 Query: 416 LNYN 427 L Y+ Sbjct: 61 LLYS 64 [138][TOP] >UniRef100_C6A1B7 DNA-directed RNA polymerase subunit N n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1B7_THESM Length = 68 Score = 81.6 bits (200), Expect = 3e-14 Identities = 32/62 (51%), Positives = 50/62 (80%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 +I+PVRCFTCGKVIG+K+ + + ++ G ++ LD LGL RYCCRRM ++HV+LI++++ Sbjct: 4 LIVPVRCFTCGKVIGDKYYIFKERVEKGEDPEKVLDDLGLERYCCRRMFLSHVELIDEIM 63 Query: 419 NY 424 +Y Sbjct: 64 HY 65 [139][TOP] >UniRef100_B8BNG7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8BNG7_ORYSI Length = 223 Score = 81.3 bits (199), Expect = 4e-14 Identities = 48/94 (51%), Positives = 54/94 (57%), Gaps = 22/94 (23%) Frame = +2 Query: 236 KMIIPVRCFTCGK----------VIGNKWDTYLDLLQAGYSEQ------------EALDG 349 +MIIPVRCFTCGK +G+ LL G + +ALD Sbjct: 129 EMIIPVRCFTCGKWQWKTARGGEALGSNGRDRDGLLWGGGRQLADGDADLSMRTWDALDA 188 Query: 350 LGLSRYCCRRMLMTHVDLIEKLLNYNTLERAAQA 451 LGL RYCCRRMLMTHVDLIEKLLNYNTLE+ A Sbjct: 189 LGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETA 222 [140][TOP] >UniRef100_A1RWV6 DNA-directed RNA polymerase, subunit N n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWV6_THEPD Length = 90 Score = 81.3 bits (199), Expect = 4e-14 Identities = 31/69 (44%), Positives = 49/69 (71%) Frame = +2 Query: 230 R*KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIE 409 R +M+ P+RCFTCG +IG+KW+ Y + G + LD LG++RYCCRRM ++H + I+ Sbjct: 12 RTRMMFPIRCFTCGALIGDKWNEYSTRVANGEDPNKVLDDLGITRYCCRRMFLSHTEAID 71 Query: 410 KLLNYNTLE 436 K++ Y ++E Sbjct: 72 KIIKYGSIE 80 [141][TOP] >UniRef100_C3N058 DNA-directed RNA polymerase subunit N n=7 Tax=Sulfolobus RepID=RPON_SULIA Length = 66 Score = 80.9 bits (198), Expect = 5e-14 Identities = 30/62 (48%), Positives = 48/62 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IP+RCFTCG +I +KW ++ + AG + + LD LG+ RYCCRRML++H+D+I +++ Sbjct: 1 MMIPIRCFTCGSLIADKWQPFITRVNAGENPGKVLDDLGVKRYCCRRMLLSHIDIISEVI 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [142][TOP] >UniRef100_Q8TVB4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanopyrus kandleri RepID=RPON_METKA Length = 72 Score = 80.9 bits (198), Expect = 5e-14 Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQA-GYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIP+RCFTCG+ I + W+ Y++L++ G EALD LG+ RYCCRRM ++HVDL+E+ Sbjct: 1 MIIPIRCFTCGRPIAHLWEKYVELIEEEGMEPGEALDELGVDRYCCRRMFLSHVDLLEES 60 Query: 416 LNY 424 L Y Sbjct: 61 LPY 63 [143][TOP] >UniRef100_Q00ZB8 Chromosome 11 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q00ZB8_OSTTA Length = 389 Score = 80.5 bits (197), Expect = 6e-14 Identities = 41/96 (42%), Positives = 59/96 (61%) Frame = -3 Query: 439 ALQGVVVEQLLNQVHVRHQHAPTAVPAQAKAVQRLLFAVACLEQVQVGVPLVPNHLPASE 260 A + V+ +QLL+++ V H H TAVP Q + VQ + AV L+++QVGVP VP+HLPA E Sbjct: 211 AFERVIPQQLLDEIDVTHHHPSTAVPLQTQRVQGVALAVVRLQEIQVGVPFVPDHLPARE 270 Query: 259 APHWDNHFLSPWSRWTREAPRGHQERSPSRSALSLV 152 APH ++H +P T AP + R R A + + Sbjct: 271 APHGNDHRSTPEPWSTARAPPSIRARRRVRRARAAI 306 [144][TOP] >UniRef100_Q2L364 RNA polymerase I subunit 1RPB10 n=1 Tax=Trypanosoma brucei brucei RepID=Q2L364_TRYBB Length = 84 Score = 80.1 bits (196), Expect = 8e-14 Identities = 33/63 (52%), Positives = 50/63 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKV+G+ ++ Y +LL ++E EAL+ L LSR CCRRM+++H+DL + LL Sbjct: 1 MLIPVRCYSCGKVVGHLYELYQELLNQDHTEAEALNALRLSRMCCRRMILSHIDLADDLL 60 Query: 419 NYN 427 Y+ Sbjct: 61 PYS 63 [145][TOP] >UniRef100_C9ZJZ7 DNA-directed RNA polymerase subunit, putative n=2 Tax=Trypanosoma brucei RepID=C9ZJZ7_TRYBG Length = 84 Score = 80.1 bits (196), Expect = 8e-14 Identities = 33/63 (52%), Positives = 50/63 (79%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKV+G+ ++ Y +LL ++E EAL+ L LSR CCRRM+++H+DL + LL Sbjct: 1 MLIPVRCYSCGKVVGHLYELYQELLNQDHTEAEALNALRLSRMCCRRMILSHIDLADDLL 60 Query: 419 NYN 427 Y+ Sbjct: 61 PYS 63 [146][TOP] >UniRef100_B7XIS4 DNA-directed RNA polymerases I, II, and III, subunit 10 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XIS4_ENTBH Length = 74 Score = 80.1 bits (196), Expect = 8e-14 Identities = 36/66 (54%), Positives = 48/66 (72%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCF+C K I +K++ YL+LL G S +ALD LGL+R CCRRM + HVD+ ++LL Sbjct: 6 MIIPVRCFSCNKEISSKYEKYLELLSRGVSPADALDQLGLTRICCRRMYLGHVDIGDQLL 65 Query: 419 NYNTLE 436 + E Sbjct: 66 QFENTE 71 [147][TOP] >UniRef100_A4YIM8 DNA-directed RNA polymerase subunit N n=1 Tax=Metallosphaera sedula DSM 5348 RepID=RPON_METS5 Length = 66 Score = 79.3 bits (194), Expect = 1e-13 Identities = 33/62 (53%), Positives = 45/62 (72%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG +I +KWD + ++AG + LD L + R CCRR L+THVD+I +++ Sbjct: 1 MIIPVRCFTCGSLIADKWDAFSTRVRAGEDPGKVLDDLNVKRLCCRRSLLTHVDIIREVV 60 Query: 419 NY 424 NY Sbjct: 61 NY 62 [148][TOP] >UniRef100_C6T1S6 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T1S6_SOYBN Length = 111 Score = 78.2 bits (191), Expect = 3e-13 Identities = 34/80 (42%), Positives = 53/80 (66%) Frame = -3 Query: 436 LQGVVVEQLLNQVHVRHQHAPTAVPAQAKAVQRLLFAVACLEQVQVGVPLVPNHLPASEA 257 +Q +V+EQLLN+++V H+HAPT +P Q++ +Q + F V CLE+VQ+G+P V N+L + Sbjct: 30 VQSIVIEQLLNEINVGHKHAPTTIPNQSQCIQCISFTVICLEKVQIGIPFVSNYLSTGKT 89 Query: 256 PHWDNHFLSPWSRWTREAPR 197 + D+H L S PR Sbjct: 90 TNGDDHLLPLLSSVLTTKPR 109 [149][TOP] >UniRef100_C4M5M4 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M5M4_ENTHI Length = 73 Score = 78.2 bits (191), Expect = 3e-13 Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 MIIPVRCFTCGKVIGNKW+ +L+L G + LG+ RYCC+RML++HV+LI L Sbjct: 1 MIIPVRCFTCGKVIGNKWEKFLELATGGKVPMDQVFSELGIERYCCKRMLVSHVNLIGFL 60 Query: 416 LNYN 427 Y+ Sbjct: 61 SMYD 64 [150][TOP] >UniRef100_A9A430 RNA polymerase, N/8 Kd subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A430_NITMS Length = 90 Score = 78.2 bits (191), Expect = 3e-13 Identities = 33/72 (45%), Positives = 53/72 (73%), Gaps = 1/72 (1%) Frame = +2 Query: 236 KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 +M+IPVRCFTCG +I +K+D Y + ++AG ++ L+ LG+ RYCCRRML+T V+ I+++ Sbjct: 12 RMLIPVRCFTCGNLIADKYDDYQNKIKAGEDPEKTLESLGIERYCCRRMLLTTVETIQQV 71 Query: 416 LN-YNTLERAAQ 448 + Y ++R Q Sbjct: 72 IPFYEAIQRRKQ 83 [151][TOP] >UniRef100_P39472 DNA-directed RNA polymerase subunit N n=1 Tax=Sulfolobus acidocaldarius RepID=RPON_SULAC Length = 66 Score = 78.2 bits (191), Expect = 3e-13 Identities = 29/62 (46%), Positives = 48/62 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCG V+ +KW+ + + + G ++ L LG++RYCCRRML++HV++I +++ Sbjct: 1 MIIPIRCFTCGAVVADKWEPFSNRVMGGEDPEKVLTELGVNRYCCRRMLLSHVNIIREII 60 Query: 419 NY 424 +Y Sbjct: 61 HY 62 [152][TOP] >UniRef100_B6YSQ7 DNA-directed RNA polymerase subunit N n=1 Tax=Thermococcus onnurineus NA1 RepID=RPON_THEON Length = 65 Score = 77.4 bits (189), Expect = 5e-13 Identities = 32/62 (51%), Positives = 48/62 (77%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCGKVIG+K+ + ++ G ++ LD LG+ RYCCRR L++HV+LI++++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYEFKARVEKGEDPEKVLDDLGVERYCCRRTLLSHVELIDQVM 60 Query: 419 NY 424 Y Sbjct: 61 VY 62 [153][TOP] >UniRef100_Q46CK8 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=RPON_METBF Length = 62 Score = 77.4 bits (189), Expect = 5e-13 Identities = 33/61 (54%), Positives = 44/61 (72%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCF+CGKVI N WD Y + G + LD LG++RYCCRRML++HV+L++ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVSDGENAAAVLDDLGITRYCCRRMLLSHVELVDVLSP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [154][TOP] >UniRef100_C5A245 DNA-directed RNA polymerase subunit N (RpoN) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A245_THEGJ Length = 70 Score = 77.0 bits (188), Expect = 7e-13 Identities = 32/63 (50%), Positives = 48/63 (76%) Frame = +2 Query: 236 KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 KMI+PVRCFTCGKV+ +K+ + ++AG + LD LG+ RYCCRR L++HV+LI+++ Sbjct: 5 KMIVPVRCFTCGKVLADKYYEFRKRVEAGEDPGKVLDDLGVERYCCRRTLLSHVELIDQV 64 Query: 416 LNY 424 + Y Sbjct: 65 MVY 67 [155][TOP] >UniRef100_A2SSV3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanocorpusculum labreanum Z RepID=RPON_METLZ Length = 62 Score = 77.0 bits (188), Expect = 7e-13 Identities = 33/61 (54%), Positives = 42/61 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKVI W+ Y AG +E LD LGL RYCCRRML++H + +++L Sbjct: 1 MIPVRCFTCGKVISTVWEEYQQRKAAGEDPKEILDSLGLDRYCCRRMLLSHKETVDELYP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [156][TOP] >UniRef100_Q2QWW6 Expressed protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QWW6_ORYSJ Length = 202 Score = 76.6 bits (187), Expect = 9e-13 Identities = 45/94 (47%), Positives = 47/94 (50%), Gaps = 42/94 (44%) Frame = +2 Query: 272 KVIGNKWDTYLDLLQAGYSEQ--------------------------------------- 334 KVIGNKWD YLDLLQA Y+E Sbjct: 93 KVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGRRLADGDADLSV 152 Query: 335 ---EALDGLGLSRYCCRRMLMTHVDLIEKLLNYN 427 +ALD LGL RYCCRRMLMTHVDLIEKLLNYN Sbjct: 153 HMWDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 186 [157][TOP] >UniRef100_B9GC63 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9GC63_ORYSJ Length = 144 Score = 76.6 bits (187), Expect = 9e-13 Identities = 45/94 (47%), Positives = 47/94 (50%), Gaps = 42/94 (44%) Frame = +2 Query: 272 KVIGNKWDTYLDLLQAGYSEQ--------------------------------------- 334 KVIGNKWD YLDLLQA Y+E Sbjct: 35 KVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGRRLADGDADLSV 94 Query: 335 ---EALDGLGLSRYCCRRMLMTHVDLIEKLLNYN 427 +ALD LGL RYCCRRMLMTHVDLIEKLLNYN Sbjct: 95 HMWDALDALGLVRYCCRRMLMTHVDLIEKLLNYN 128 [158][TOP] >UniRef100_Q8PW43 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina mazei RepID=RPON_METMA Length = 62 Score = 75.5 bits (184), Expect = 2e-12 Identities = 33/61 (54%), Positives = 42/61 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCF+CGKVI N WD Y + G LD LG++RYCCRRM ++HV+LI+ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVTDGEDAAAVLDDLGITRYCCRRMFLSHVELIDVLSP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [159][TOP] >UniRef100_Q8TT41 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina acetivorans RepID=RPON_METAC Length = 62 Score = 75.5 bits (184), Expect = 2e-12 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCF+CGKVI N WD Y + G LD LG++RYCCRRM ++HV+L++ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVTDGEGSAAVLDDLGITRYCCRRMFLSHVELVDVLSP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [160][TOP] >UniRef100_C7NMY3 RNA polymerase, N/8 Kd subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NMY3_HALUD Length = 64 Score = 75.1 bits (183), Expect = 3e-12 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEA-LDGLGLSRYCCRRMLMTHVDLIEKL 415 M+IPVRCFTCG VIGN+W+ + + + G + EA LD LG+ R+CCRRML++H DL++ + Sbjct: 1 MMIPVRCFTCGTVIGNEWEEFKERAREGEEDPEAVLDELGVDRHCCRRMLVSHEDLVDVV 60 Query: 416 LNY 424 Y Sbjct: 61 SPY 63 [161][TOP] >UniRef100_Q5JJC9 DNA-directed RNA polymerase subunit N n=2 Tax=Thermococcus RepID=RPON_PYRKO Length = 65 Score = 75.1 bits (183), Expect = 3e-12 Identities = 31/62 (50%), Positives = 47/62 (75%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCGKV+ +K+ + ++AG + LD LG+ RYCCRR L++HV+LI++++ Sbjct: 1 MIVPVRCFTCGKVLADKYYEFKKRVEAGEDPGKVLDDLGVERYCCRRTLLSHVELIDQVM 60 Query: 419 NY 424 Y Sbjct: 61 VY 62 [162][TOP] >UniRef100_A7IAH1 DNA-directed RNA polymerase subunit N n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=RPON_METB6 Length = 62 Score = 75.1 bits (183), Expect = 3e-12 Identities = 32/61 (52%), Positives = 44/61 (72%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKVI W+ Y + G ++ LD LG++RYCCRRML+TH ++I++L Sbjct: 1 MIPVRCFTCGKVISPAWEEYKARREKGEDPKKILDDLGITRYCCRRMLLTHKEIIDELNP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [163][TOP] >UniRef100_Q2Q0G7 DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ Length = 68 Score = 74.3 bits (181), Expect = 4e-12 Identities = 31/63 (49%), Positives = 45/63 (71%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKV+ + + Y++ AG QE LD L LSRYCCRRM + H+DLI+ + Sbjct: 1 MLIPVRCWSCGKVVAHLYKKYVERTAAGEDPQEVLDDLALSRYCCRRMFVGHIDLIDDIA 60 Query: 419 NYN 427 ++ Sbjct: 61 PFS 63 [164][TOP] >UniRef100_A3CWI3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanoculleus marisnigri JR1 RepID=RPON_METMJ Length = 62 Score = 74.3 bits (181), Expect = 4e-12 Identities = 32/61 (52%), Positives = 40/61 (65%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKV+ W + + AG + LD LGL RYCCRRML+TH + +E L Sbjct: 1 MIPVRCFTCGKVVSTAWKEFKERRDAGEDPKRILDDLGLERYCCRRMLLTHKETVEDLNP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [165][TOP] >UniRef100_C4VBT4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VBT4_NOSCE Length = 74 Score = 73.9 bits (180), Expect = 6e-12 Identities = 31/63 (49%), Positives = 44/63 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRCFTC K I +KW+ Y L+ S +AL+ L + R CCRRM + HV++I+KL+ Sbjct: 1 MLIPVRCFTCNKEISSKWEPYKYLINTDKSPADALNELDIKRICCRRMFLGHVEIIDKLI 60 Query: 419 NYN 427 Y+ Sbjct: 61 KYD 63 [166][TOP] >UniRef100_A8M9S4 DNA-directed RNA polymerase subunit N n=1 Tax=Caldivirga maquilingensis IC-167 RepID=RPON_CALMQ Length = 67 Score = 73.9 bits (180), Expect = 6e-12 Identities = 29/67 (43%), Positives = 48/67 (71%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+P+RC+TCG+ +G+ W+ + + + AG + LD L ++RYCCRR L+ HV+LI ++L Sbjct: 1 MIVPIRCWTCGRPLGHLWEPFRNRVLAGEDPGKVLDDLHVTRYCCRRTLLAHVELINQVL 60 Query: 419 NYNTLER 439 Y +E+ Sbjct: 61 PYGLIEK 67 [167][TOP] >UniRef100_B8GEG1 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosphaerula palustris E1-9c RepID=RPON_METPE Length = 62 Score = 73.6 bits (179), Expect = 7e-12 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKVI W+ + AG LD LGL++YCCRRML+TH ++I++L Sbjct: 1 MIPVRCFTCGKVISTAWEEFKQRRDAGEDPGAILDDLGLTQYCCRRMLLTHKEIIDELNP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [168][TOP] >UniRef100_B3T069 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T069_9ZZZZ Length = 68 Score = 73.2 bits (178), Expect = 1e-11 Identities = 29/63 (46%), Positives = 46/63 (73%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+IPVRC++CGKV+ + ++ Y + AG ++ LD LGL RYCCRRM + H+DLI+++ Sbjct: 1 MLIPVRCWSCGKVVAHLYEQYKTAVDAGEDAEKVLDDLGLERYCCRRMYVGHIDLIDEIA 60 Query: 419 NYN 427 ++ Sbjct: 61 PFS 63 [169][TOP] >UniRef100_B3T888 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T888_9ARCH Length = 78 Score = 73.2 bits (178), Expect = 1e-11 Identities = 29/62 (46%), Positives = 47/62 (75%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+PVRCFTCG ++ +K++ Y + +++G + LD LG+ RYCCRRML+T V+ I+++L Sbjct: 1 MIVPVRCFTCGNLVADKFEEYQNRVKSGEEPAKILDSLGIDRYCCRRMLLTTVETIQQVL 60 Query: 419 NY 424 + Sbjct: 61 PF 62 [170][TOP] >UniRef100_O29135 DNA-directed RNA polymerase subunit N n=1 Tax=Archaeoglobus fulgidus RepID=RPON_ARCFU Length = 76 Score = 73.2 bits (178), Expect = 1e-11 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +2 Query: 248 PVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLNYN 427 P+RCF+CG VIG+ +D Y L G S +EALD LG+ RYCCRRM +TH +I++L ++ Sbjct: 13 PIRCFSCGAVIGHLYDEYKQKLSEGKSPKEALDELGIERYCCRRMFITHKSVIKELSRFH 72 [171][TOP] >UniRef100_B1L5N0 DNA-directed RNA polymerase, subunit N n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5N0_KORCO Length = 67 Score = 72.8 bits (177), Expect = 1e-11 Identities = 28/64 (43%), Positives = 44/64 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 + P+RCFTCG VIG+KW+ + + AG E LD + + RYCCRRM ++H++L + L+ Sbjct: 1 MFPIRCFTCGSVIGDKWEEFSRRVMAGEDPGEVLDSMNIKRYCCRRMFLSHIELSDLELS 60 Query: 422 YNTL 433 ++ L Sbjct: 61 FSPL 64 [172][TOP] >UniRef100_A3DMR0 DNA-directed RNA polymerase subunit N n=1 Tax=Staphylothermus marinus F1 RepID=RPON_STAMF Length = 66 Score = 72.8 bits (177), Expect = 1e-11 Identities = 28/62 (45%), Positives = 44/62 (70%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+ PVRCFTCG IG+ W+ + ++AG + LD LG+ RYCCRRM ++H+++ ++L Sbjct: 1 MMFPVRCFTCGAPIGHLWEEFKKRVEAGEDPGKVLDDLGVKRYCCRRMFLSHIEISYEIL 60 Query: 419 NY 424 N+ Sbjct: 61 NF 62 [173][TOP] >UniRef100_B8D6F4 DNA-directed RNA polymerase subunit N n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6F4_DESK1 Length = 76 Score = 72.0 bits (175), Expect = 2e-11 Identities = 27/62 (43%), Positives = 45/62 (72%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 ++ PVRCFTCGK IG+ W+ Y+ ++ G + + LD LG+ RYCCRRM +++ D+ +++L Sbjct: 11 LLFPVRCFTCGKPIGHLWEEYIKRVENGENPAKVLDDLGVKRYCCRRMFLSYTDISKEIL 70 Query: 419 NY 424 + Sbjct: 71 YF 72 [174][TOP] >UniRef100_B3T4Z6 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N18 RepID=B3T4Z6_9ARCH Length = 78 Score = 72.0 bits (175), Expect = 2e-11 Identities = 27/62 (43%), Positives = 47/62 (75%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M++PVRCFTCG ++ +K++ Y + +++G + LD LG+ RYCCRRM++T V+ I+++L Sbjct: 1 MLVPVRCFTCGNLVADKFEEYQNRVKSGEEPAKILDSLGIDRYCCRRMMLTTVETIQQIL 60 Query: 419 NY 424 + Sbjct: 61 PF 62 [175][TOP] >UniRef100_A0RY12 DNA-directed RNA polymerase, subunit N n=1 Tax=Cenarchaeum symbiosum RepID=A0RY12_CENSY Length = 78 Score = 71.6 bits (174), Expect = 3e-11 Identities = 27/62 (43%), Positives = 45/62 (72%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M++PVRCFTCG ++ +K+ Y ++AG + + LD LG+ RYCCRRML T ++ I++++ Sbjct: 1 MLVPVRCFTCGNLVADKFGEYKSRVEAGEAPGKVLDSLGMERYCCRRMLFTSIETIQQII 60 Query: 419 NY 424 + Sbjct: 61 PF 62 [176][TOP] >UniRef100_C7DIN4 RNA polymerase, N/8 Kd subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIN4_9EURY Length = 69 Score = 71.2 bits (173), Expect = 4e-11 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Frame = +2 Query: 236 KMIIPVRCFTCGKVIGNKWDTYLDLLQA-GYSEQEALDGLGLSRYCCRRMLMTHVDLIEK 412 KM++PVRCFTCG V+ +KW+ Y + + G + LD LG RYCCRRM +++V+LI++ Sbjct: 3 KMMMPVRCFTCGAVVADKWEEYNNRVNKNGEDASKVLDELGFKRYCCRRMFISNVELIDE 62 Query: 413 LLN 421 +N Sbjct: 63 FIN 65 [177][TOP] >UniRef100_B9ZE21 RNA polymerase, N/8 Kd subunit n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZE21_NATMA Length = 64 Score = 70.9 bits (172), Expect = 5e-11 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE-ALDGLGLSRYCCRRMLMTHVDLIEKL 415 M++PVRCFTCG V+G W+ + + G + E LD LG+ RYCCRRML++H DL++ + Sbjct: 1 MMVPVRCFTCGTVVGEHWEEFDERANEGDEDPEKVLDELGVDRYCCRRMLVSHTDLVDVV 60 Query: 416 LNY 424 Y Sbjct: 61 SPY 63 [178][TOP] >UniRef100_A4WNA8 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=RPON_PYRAR Length = 65 Score = 70.9 bits (172), Expect = 5e-11 Identities = 33/62 (53%), Positives = 42/62 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK +G+ + + + AG + LD LGL RYCCRR LM HV+ I+ +L Sbjct: 1 MIIPVRCFTCGKPLGHLYAVFKQRVLAGEHPGKVLDDLGLVRYCCRRTLMAHVEWIDDVL 60 Query: 419 NY 424 Y Sbjct: 61 IY 62 [179][TOP] >UniRef100_Q18G60 DNA-directed RNA polymerase subunit N n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=RPON_HALWD Length = 64 Score = 70.9 bits (172), Expect = 5e-11 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ-EALDGLGLSRYCCRRMLMTHVDLIEKL 415 M+IPVRCFTCG VIG WD + + G + E LD LG+ R+CCRRM+++H DL++ + Sbjct: 1 MMIPVRCFTCGTVIGEHWDEFKQRARDGNEDPGEVLDDLGIKRHCCRRMMVSHRDLVDVV 60 Query: 416 LNY 424 Y Sbjct: 61 APY 63 [180][TOP] >UniRef100_UPI0000D9ABE2 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Macaca mulatta RepID=UPI0000D9ABE2 Length = 107 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/61 (57%), Positives = 44/61 (72%) Frame = +2 Query: 251 VRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLNYNT 430 VRCFTC K +GN W+ YL LLQA Y++++AL L +CC ML+ HVDLI+KLLNY Sbjct: 48 VRCFTCSKTVGNTWEAYLGLLQAKYTDRDAL-RLKHYSHCC--MLLAHVDLIQKLLNYAL 104 Query: 431 L 433 L Sbjct: 105 L 105 [181][TOP] >UniRef100_Q9YB47 DNA-directed RNA polymerase subunit N n=1 Tax=Aeropyrum pernix RepID=RPON_AERPE Length = 77 Score = 70.5 bits (171), Expect = 6e-11 Identities = 31/62 (50%), Positives = 41/62 (66%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 M+ PVRCFTCG+ +G+ W + +L+ +G + EALD LG+ RYCCRR L T V IE Sbjct: 1 MLPPVRCFTCGRPLGHLWPRFRELVASGKTPGEALDELGVDRYCCRRTLFTSVTYIEHAA 60 Query: 419 NY 424 Y Sbjct: 61 KY 62 [182][TOP] >UniRef100_A0B6E7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosaeta thermophila PT RepID=RPON_METTP Length = 61 Score = 70.1 bits (170), Expect = 8e-11 Identities = 29/61 (47%), Positives = 45/61 (73%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCF+CGKVI + W+ Y + +++ + +D LG+ RYCCRRML++HV+++E L Sbjct: 1 MIPVRCFSCGKVISSVWEEYRERIKSE-PPGKVMDDLGIERYCCRRMLLSHVEVVEMLRR 59 Query: 422 Y 424 Y Sbjct: 60 Y 60 [183][TOP] >UniRef100_A3MXZ9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=RPON_PYRCJ Length = 66 Score = 69.7 bits (169), Expect = 1e-10 Identities = 33/62 (53%), Positives = 41/62 (66%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCGK +G+ + + + AG LD LG+ RYCCRR LM HV+ I+ LL Sbjct: 1 MIIPVRCFTCGKPLGHLYAVFKKRVLAGEHPGRVLDELGVVRYCCRRTLMAHVEWIDDLL 60 Query: 419 NY 424 Y Sbjct: 61 VY 62 [184][TOP] >UniRef100_B1YC34 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=RPON_THENV Length = 66 Score = 69.3 bits (168), Expect = 1e-10 Identities = 31/62 (50%), Positives = 43/62 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIPVRCFTCG+ +G+ + + + AG E LD LG+ RYCCRR L++HV+ I+ +L Sbjct: 1 MIIPVRCFTCGRPLGHLYPIFKRRVLAGERPGEVLDSLGVYRYCCRRTLLSHVEWIDDVL 60 Query: 419 NY 424 Y Sbjct: 61 AY 62 [185][TOP] >UniRef100_A1RSD9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=RPON_PYRIL Length = 66 Score = 69.3 bits (168), Expect = 1e-10 Identities = 31/62 (50%), Positives = 42/62 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MI+P+RCFTCGK +G+ + T+ + AG LD LG+ RYCCRR L+ HV+ I+ LL Sbjct: 1 MIVPIRCFTCGKPLGHLYITFKHRVLAGEHPGRVLDELGVHRYCCRRTLIAHVEWIDDLL 60 Query: 419 NY 424 Y Sbjct: 61 VY 62 [186][TOP] >UniRef100_Q8ZYP9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum aerophilum RepID=RPON_PYRAE Length = 66 Score = 69.3 bits (168), Expect = 1e-10 Identities = 31/62 (50%), Positives = 42/62 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCGK +G+ + + + AG LD LG++RYCCRR LM HV+ I+ +L Sbjct: 1 MIIPIRCFTCGKPLGHLYAVFKRRVLAGEHPGRVLDDLGVTRYCCRRTLMAHVEWIDDVL 60 Query: 419 NY 424 Y Sbjct: 61 LY 62 [187][TOP] >UniRef100_Q2FTN7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanospirillum hungatei JF-1 RepID=RPON_METHJ Length = 62 Score = 68.9 bits (167), Expect = 2e-10 Identities = 30/61 (49%), Positives = 41/61 (67%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKVI ++ + A + LD LG+ RYCCRRML+TH ++I++L Sbjct: 1 MIPVRCFTCGKVISTAYEEFKRRRDASEDPKRILDDLGMDRYCCRRMLLTHKEIIDELNP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [188][TOP] >UniRef100_UPI00003C8433 DNA-directed RNA polymerase subunit N n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI00003C8433 Length = 73 Score = 68.6 bits (166), Expect = 2e-10 Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 10/73 (13%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ----------AGYSEQEALDGLGLSRYCCRRMLM 388 MIIPVRCF+CGKVIG+ + +++ + G + E LD LG+ RYCCRRM++ Sbjct: 1 MIIPVRCFSCGKVIGSDYVRFVEESKKIRKDTGHDPTGKEKSEILDNLGVDRYCCRRMIL 60 Query: 389 THVDLIEKLLNYN 427 ++ DL++++++Y+ Sbjct: 61 SNADLLDEVISYS 73 [189][TOP] >UniRef100_C1V6C4 DNA-directed RNA polymerase, subunit N n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V6C4_9EURY Length = 64 Score = 67.8 bits (164), Expect = 4e-10 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAG-YSEQEALDGLGLSRYCCRRMLMTHVDLIEKL 415 M+IPVRCFTCG V+G WD + + G + + LD LG+ R+CCRRM+++H DL++ + Sbjct: 1 MMIPVRCFTCGNVVGEHWDEFKARAREGDENPAKVLDELGVERHCCRRMMVSHKDLVDVV 60 Query: 416 LNY 424 Y Sbjct: 61 APY 63 [190][TOP] >UniRef100_Q12TI4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=RPON_METBU Length = 62 Score = 67.4 bits (163), Expect = 5e-10 Identities = 29/61 (47%), Positives = 36/61 (59%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 +IPVRCFTCGKVI W+ Y G LD L RYCCRRM + HV+L++ + Sbjct: 1 MIPVRCFTCGKVIAGSWEEYKRRTGEGEDPATVLDDLKFVRYCCRRMFLAHVELVDTMAP 60 Query: 422 Y 424 Y Sbjct: 61 Y 61 [191][TOP] >UniRef100_B9LPW4 DNA-directed RNA polymerase subunit N n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=RPON_HALLT Length = 64 Score = 67.4 bits (163), Expect = 5e-10 Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ-EALDGLGLSRYCCRRMLMTHVDLIEKL 415 M+IPVRCFTCG V+G W+ + + + G + + LD LG+ R+CCRRM+++H DL++ + Sbjct: 1 MMIPVRCFTCGNVVGEHWEEFKERAREGDEDPGKVLDELGVDRHCCRRMMVSHRDLVDVV 60 Query: 416 LNY 424 Y Sbjct: 61 SPY 63 [192][TOP] >UniRef100_Q0W8C7 DNA-directed RNA polymerase subunit N n=1 Tax=uncultured methanogenic archaeon RC-I RepID=RPON_UNCMA Length = 71 Score = 66.6 bits (161), Expect = 9e-10 Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 13/74 (17%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYL-------------DLLQAGYSEQEALDGLGLSRYCCRRM 382 +IPVRCFTCGKVI W+ Y ++L+ G + LD LG+ RYCCRRM Sbjct: 1 MIPVRCFTCGKVISEVWEEYKARVEERKMNLQHGEVLKVG----DILDDLGVERYCCRRM 56 Query: 383 LMTHVDLIEKLLNY 424 L++HV+L++ L Y Sbjct: 57 LLSHVELVDVLAPY 70 [193][TOP] >UniRef100_Q979K0 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoplasma volcanium RepID=RPON_THEVO Length = 72 Score = 66.6 bits (161), Expect = 9e-10 Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 9/72 (12%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSE---------QEALDGLGLSRYCCRRMLMT 391 MIIPVRCF+CG+VI + + YL + SE ++ D LG+ RYCCRRM+++ Sbjct: 1 MIIPVRCFSCGRVIASDYGRYLRRINEIRSEGREPTAEEIEKIFDDLGVERYCCRRMIIS 60 Query: 392 HVDLIEKLLNYN 427 HVDLI +++ ++ Sbjct: 61 HVDLINEIMPFS 72 [194][TOP] >UniRef100_Q3IQT2 DNA-directed RNA polymerase subunit N n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=RPON_NATPD Length = 64 Score = 66.2 bits (160), Expect = 1e-09 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQ-EALDGLGLSRYCCRRMLMTHVDLIEKL 415 M++PVRCFTCG V+G W + + + G + E LD LG+ R CCRRML++H DL++ + Sbjct: 1 MMVPVRCFTCGTVVGEHWGEFKERAREGDEDPAEVLDELGVERACCRRMLVSHKDLVDIV 60 Query: 416 LNY 424 Y Sbjct: 61 SPY 63 [195][TOP] >UniRef100_A5UN59 DNA-directed RNA polymerase, subunit N, RpoN n=2 Tax=Methanobrevibacter smithii RepID=A5UN59_METS3 Length = 56 Score = 65.1 bits (157), Expect = 3e-09 Identities = 28/56 (50%), Positives = 39/56 (69%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIE 409 +IP+RC +CGK + +D Y L AG ++ LD LGL+RYCCRRML++HV+ E Sbjct: 1 MIPIRCLSCGKPVSAYFDEYNKRLAAGEKSKDILDDLGLNRYCCRRMLISHVETWE 56 [196][TOP] >UniRef100_Q9HL09 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoplasma acidophilum RepID=RPON_THEAC Length = 72 Score = 65.1 bits (157), Expect = 3e-09 Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 9/72 (12%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSE---------QEALDGLGLSRYCCRRMLMT 391 MIIPVRCF+CG+VI + + Y+ + +E ++ D LG+ RYCCRRM+++ Sbjct: 1 MIIPVRCFSCGRVIASDYGRYIKRVNEIKAEGRDPSPEEIEKIFDDLGIERYCCRRMIVS 60 Query: 392 HVDLIEKLLNYN 427 HVDLI +++ ++ Sbjct: 61 HVDLISEIMPFS 72 [197][TOP] >UniRef100_A2BK83 DNA-directed RNA polymerase subunit N n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RPON_HYPBU Length = 66 Score = 64.7 bits (156), Expect = 3e-09 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 418 MIIP+RCFTCG+ + W+ + ++ G ++ LD LG+ RYCCR+ L+ HV I ++ Sbjct: 1 MIIPMRCFTCGRPLAQYWEEFRSRVEGGEDPRKVLDELGVKRYCCRKTLLAHVPAIYEVR 60 Query: 419 NY 424 + Sbjct: 61 KF 62 [198][TOP] >UniRef100_Q6L292 DNA-directed RNA polymerase subunit N n=1 Tax=Picrophilus torridus RepID=RPON_PICTO Length = 72 Score = 63.9 bits (154), Expect = 6e-09 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 10/72 (13%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQA----------GYSEQEALDGLGLSRYCCRRMLM 388 MIIPVRCF+CG+VI + + + + G + + LD LG+ RYCCRRM++ Sbjct: 1 MIIPVRCFSCGRVIASDYVRFTEACTKIINETGREPRGEEKAKILDDLGVKRYCCRRMIL 60 Query: 389 THVDLIEKLLNY 424 +H DLI+++L Y Sbjct: 61 SHKDLIDEVLPY 72 [199][TOP] >UniRef100_P29199 DNA-directed RNA polymerase subunit N n=1 Tax=Haloarcula marismortui RepID=RPON_HALMA Length = 66 Score = 63.9 bits (154), Expect = 6e-09 Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE---ALDGLGLSRYCCRRMLMTHVDLIE 409 M++PVRCFTCG V+G W+ + + ++ LD LG+ R+CCRRML++H DL++ Sbjct: 1 MMVPVRCFTCGNVVGEHWEEFKARTREAEEPEDPEKVLDELGVERHCCRRMLVSHKDLVD 60 Query: 410 KLLNY 424 + Y Sbjct: 61 IVSPY 65 [200][TOP] >UniRef100_Q2NG00 RpoN n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NG00_METST Length = 55 Score = 63.5 bits (153), Expect = 8e-09 Identities = 26/51 (50%), Positives = 37/51 (72%) Frame = +2 Query: 251 VRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDL 403 VRCFTCGKVI +D + +AG + + LD LG+++YCCRRM ++HVD+ Sbjct: 4 VRCFTCGKVISASFDEFEKRTKAGENPNDVLDDLGITKYCCRRMFISHVDV 54 [201][TOP] >UniRef100_B0R4Y6 DNA-directed RNA polymerase subunit N n=2 Tax=Halobacterium salinarum RepID=RPON_HALS3 Length = 66 Score = 63.5 bits (153), Expect = 8e-09 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE---ALDGLGLSRYCCRRMLMTHVDLIE 409 M++PVRCF+CG V+G W+ + + +++ LD LG+ R+CCRRML+ H DL++ Sbjct: 1 MMVPVRCFSCGTVVGEHWEAFKARAETHDGDEDPADVLDDLGVDRHCCRRMLIAHQDLVD 60 Query: 410 KLLNY 424 + Y Sbjct: 61 VVSPY 65 [202][TOP] >UniRef100_A8A8W9 DNA-directed RNA polymerase, subunit N n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8W9_IGNH4 Length = 68 Score = 63.2 bits (152), Expect = 1e-08 Identities = 22/63 (34%), Positives = 46/63 (73%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLN 421 ++P+RC+TCG+ + +++ +L ++AG + LD LG+ RYCCRR +++ VD+ ++++ Sbjct: 1 MLPIRCYTCGRPLWPEYEEFLRRVEAGEEPGKVLDDLGIKRYCCRRTMLSAVDISKEIIK 60 Query: 422 YNT 430 ++T Sbjct: 61 FST 63 [203][TOP] >UniRef100_UPI00005A37B8 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Canis lupus familiaris RepID=UPI00005A37B8 Length = 154 Score = 62.4 bits (150), Expect = 2e-08 Identities = 41/90 (45%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Frame = +2 Query: 173 RGRAFLVASRGLAGPAAPGR*KMIIPVRCFTCGKVIGNKWDTYLDLLQAGYSE-QEALDG 349 RG FL G PG +PV G N L G E ++ALD Sbjct: 72 RGPGFLATEP--CGAGRPGAALPSLPVSTGLAGVCTFNP-----GLRSGGSGEARDALDA 124 Query: 350 LGLSRYCCRRMLMTHVDLIEKLLNYNTLER 439 LGL RYCCRRML+ HVDLIEKLLNY LE+ Sbjct: 125 LGLKRYCCRRMLLAHVDLIEKLLNYAPLEK 154 [204][TOP] >UniRef100_C7NZ13 RNA polymerase, N/8 Kd subunit n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NZ13_HALMD Length = 66 Score = 62.0 bits (149), Expect = 2e-08 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQE---ALDGLGLSRYCCRRMLMTHVDLIE 409 M++PVRCFTCG V+ W+ + + ++ LD LG+ R+CCRRML++H DL++ Sbjct: 1 MMVPVRCFTCGNVVAEHWEEFKARTREAEEPEDPEKVLDELGVERHCCRRMLVSHKDLVD 60 Query: 410 KLLNY 424 + Y Sbjct: 61 IVAPY 65 [205][TOP] >UniRef100_Q74MB5 DNA-directed RNA polymerase subunit N n=1 Tax=Nanoarchaeum equitans RepID=RPON_NANEQ Length = 65 Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/53 (45%), Positives = 37/53 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHV 397 M+ P+RCF+CGK +G+ W+ + + + G ++ LD LGL RYCCRR L++ V Sbjct: 1 MLPPIRCFSCGKPLGHLWEEFNERVNKGEDPKKVLDDLGLERYCCRRTLLSAV 53 [206][TOP] >UniRef100_UPI000186F134 transcription initiation factor supt3, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F134 Length = 317 Score = 60.1 bits (144), Expect = 9e-08 Identities = 27/35 (77%), Positives = 30/35 (85%) Frame = +2 Query: 335 EALDGLGLSRYCCRRMLMTHVDLIEKLLNYNTLER 439 +ALD LGL RYCCRRML+ HVDLIEKLLNY LE+ Sbjct: 283 DALDALGLKRYCCRRMLLGHVDLIEKLLNYAPLEK 317 [207][TOP] >UniRef100_UPI0000D9FC1D PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5), partial n=1 Tax=Macaca mulatta RepID=UPI0000D9FC1D Length = 53 Score = 59.7 bits (143), Expect = 1e-07 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = +2 Query: 272 KVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLLNYNTL 433 K +GN W+ YL LLQA Y++++AL GL S CC ML+ HVDLI+KLLNY L Sbjct: 1 KTVGNTWEAYLGLLQAKYTDRDAL-GLKHSSCCC--MLLAHVDLIQKLLNYALL 51 [208][TOP] >UniRef100_A6UPX1 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus vannielii SB RepID=RPON_METVS Length = 68 Score = 59.3 bits (142), Expect = 1e-07 Identities = 25/52 (48%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 MI P+RCF+CG VI +D Y L S +E L+ LG+++YCCRRM +H Sbjct: 1 MIFPIRCFSCGNVISEVYDEYKTRLSNVESPEEILNDLGVTKYCCRRMFASH 52 [209][TOP] >UniRef100_O26147 DNA-directed RNA polymerase subunit N n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPON_METTH Length = 55 Score = 59.3 bits (142), Expect = 1e-07 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVD 400 +IPVRC +CGK + ++ Y + G ++ LD LGL RYCCRRML++HV+ Sbjct: 1 MIPVRCLSCGKPVSAYFNEYQRRVADGEDPKDVLDDLGLKRYCCRRMLISHVE 53 [210][TOP] >UniRef100_A6UVZ9 RNA polymerase, N/8 Kd subunits n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVZ9_META3 Length = 69 Score = 58.2 bits (139), Expect = 3e-07 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 ++ P+RCF+CG VI + Y+ L+ G ALD LG+ +YCCRRM ++H Sbjct: 2 VMFPIRCFSCGGVISEVYGEYVSKLKEGADLSNALDELGIKKYCCRRMFISH 53 [211][TOP] >UniRef100_A8TGV0 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanococcus voltae A3 RepID=A8TGV0_METVO Length = 68 Score = 57.8 bits (138), Expect = 4e-07 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH-----VDL 403 M+ PVRCF+CG V+ + Y + L G E LD L +++YCCRRM +H DL Sbjct: 1 MMFPVRCFSCGTVVSEVYGEYHERLTNGEKSDEILDDLDITKYCCRRMFASHRLHNDKDL 60 Query: 404 IEKLLNY 424 + ++ Y Sbjct: 61 FDDVMEY 67 [212][TOP] >UniRef100_Q57649 DNA-directed RNA polymerase subunit N n=1 Tax=Methanocaldococcus jannaschii RepID=RPON_METJA Length = 73 Score = 57.8 bits (138), Expect = 4e-07 Identities = 21/52 (40%), Positives = 36/52 (69%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 M+ P+RCF+CG VI ++ Y + + G + ++ LD LG+ +YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERILKGENPKDVLDDLGIKKYCCRRMFISY 52 [213][TOP] >UniRef100_A7EKK8 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EKK8_SCLS1 Length = 200 Score = 57.4 bits (137), Expect = 6e-07 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +2 Query: 341 LDGLGLSRYCCRRMLMTHVDLIEKLLNYNTLERAAQ 448 +D L L RYCCRRM+MTHVDLIEKLL YN ER A+ Sbjct: 1 MDELTLKRYCCRRMIMTHVDLIEKLLRYNPAERDAK 36 [214][TOP] >UniRef100_B5IBF8 RNA polymerases N / 8 kDa subunit superfamily n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IBF8_9EURY Length = 73 Score = 57.4 bits (137), Expect = 6e-07 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 10/73 (13%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQ----------AGYSEQEALDGLGLSRYCCRRMLM 388 MIIPVRCF+CG+VI + + +++ + Q D +G+ RYCCRRM++ Sbjct: 1 MIIPVRCFSCGRVIASDYIAFVNKVNLIRETENREPTPEEIQRIFDEIGVKRYCCRRMIL 60 Query: 389 THVDLIEKLLNYN 427 +HV+LI+ + ++ Sbjct: 61 SHVNLIDDTMAFD 73 [215][TOP] >UniRef100_Q6LXM4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis RepID=RPON_METMP Length = 68 Score = 57.4 bits (137), Expect = 6e-07 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 MI P+RCF+CG VI ++ Y L+ G + +E L+ L + +YCCRRM +H Sbjct: 1 MIFPIRCFSCGNVISEVYEEYRTRLKNGENPEEILNDLEIKKYCCRRMFASH 52 [216][TOP] >UniRef100_A9A9Y7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C6 RepID=RPON_METM6 Length = 68 Score = 57.4 bits (137), Expect = 6e-07 Identities = 23/52 (44%), Positives = 35/52 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 MI P+RCF+CG VI ++ Y + L+ G + +E L+ L + +YCCRRM +H Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRNRLKDGENPEEILNDLEVKKYCCRRMFASH 52 [217][TOP] >UniRef100_C9RDV4 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RDV4_9EURY Length = 73 Score = 56.6 bits (135), Expect = 9e-07 Identities = 21/52 (40%), Positives = 35/52 (67%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 M+ P+RCF+CG VI ++ Y + + G ++ LD LG+ +YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERVLKGEDPKKVLDDLGIKKYCCRRMFVSY 52 [218][TOP] >UniRef100_A6VGR3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C7 RepID=RPON_METM7 Length = 68 Score = 56.6 bits (135), Expect = 9e-07 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 MI P+RCF+CG VI ++ Y L+ G + +E L+ L + +YCCRRM +H Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRTRLKDGENPEEILNDLEVKKYCCRRMFASH 52 [219][TOP] >UniRef100_A4FWK8 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C5 RepID=RPON_METM5 Length = 68 Score = 56.6 bits (135), Expect = 9e-07 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 MI P+RCF+CG VI ++ Y L+ G + +E L+ L + +YCCRRM +H Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRTRLKNGENPEEILNDLEVKKYCCRRMFASH 52 [220][TOP] >UniRef100_C7P6X6 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P6X6_METFA Length = 72 Score = 55.5 bits (132), Expect = 2e-06 Identities = 20/51 (39%), Positives = 35/51 (68%) Frame = +2 Query: 242 IIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 + P+RCF+CG VI ++ Y + + G + ++ LD LG+ +YCCRRM +++ Sbjct: 1 MFPIRCFSCGNVIAEVFEEYKERVLKGENPKDVLDDLGIKKYCCRRMFISY 51 [221][TOP] >UniRef100_C5U5T7 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5T7_9EURY Length = 73 Score = 55.5 bits (132), Expect = 2e-06 Identities = 21/52 (40%), Positives = 34/52 (65%) Frame = +2 Query: 239 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTH 394 M+ P+RCF+CG VI ++ Y + + G + LD LG+ +YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERVLKGEDPGKVLDDLGIKKYCCRRMFISY 52