AV620328 ( LC020f05_r )

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[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
          Length = 199

 Score =  227 bits (578), Expect = 4e-58
 Identities = 120/126 (95%), Positives = 121/126 (96%)
 Frame = +1

Query: 13  MALASKVATRPGVASRRGAVVVRASGESRRAGLGGLLASAVAGVAPKAGLALTPVDLFDD 192
           MALASKVATRP VASRRGAVVVRASGESRRA LGGLLASAVA VAPKA LALTPVDLFDD
Sbjct: 1   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60

Query: 193 RSVRERGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSD 372
           RSVR+RGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKS 
Sbjct: 61  RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120

Query: 373 WTEARE 390
           WTEARE
Sbjct: 121 WTEARE 126

[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
           RepID=Q1WLV1_CHLIN
          Length = 200

 Score =  215 bits (548), Expect = 1e-54
 Identities = 116/127 (91%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
 Frame = +1

Query: 13  MALASKVATRPGVASRRGAVVVRASGESRRAGLGGLLASAVAGVAPKAGLAL-TPVDLFD 189
           MALASKVATRP VASRRGAVVVRASGESRRA LGGLLASAVA VAPKA  A  TPVDLFD
Sbjct: 1   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60

Query: 190 DRSVRERGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKS 369
           DRS RERGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDVFI+KS
Sbjct: 61  DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120

Query: 370 DWTEARE 390
            WTEARE
Sbjct: 121 YWTEARE 127

[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
           carteri RepID=PSBQ_VOLCA
          Length = 202

 Score =  170 bits (430), Expect = 5e-41
 Identities = 94/128 (73%), Positives = 102/128 (79%), Gaps = 2/128 (1%)
 Frame = +1

Query: 13  MALASKVATRPGVASRRGAVVVRASGESRRAGLGGLLASAVAGV--APKAGLALTPVDLF 186
           MALA KVA+RP VASRRG VVVRAS ESRRA LGGLLAS V  +  A KA  A TPVDLF
Sbjct: 1   MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60

Query: 187 DDRSVRERGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQK 366
           DDR VRE GFDLIYEARDLDL Q+ R+G  QAR S+D T KRVKESE RIDADL+ FI+K
Sbjct: 61  DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120

Query: 367 SDWTEARE 390
           + WTEARE
Sbjct: 121 NYWTEARE 128

[4][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
           Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
          Length = 222

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = +1

Query: 34  ATRPGVASRRGAVVVRASGE-SRRAGLGGLLASAVAGVAPKAGLALTPVDLFDDRSVRER 210
           ATR     R     VRA  +  RR  + GL  +   G A KA  A+T  DL DDR  +  
Sbjct: 38  ATRASTGCRN----VRAQAQMDRRTAMTGLFGAMAVG-ANKA-FAVTSPDLIDDRKAKST 91

Query: 211 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSDWTEAR 387
           GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++  +   F+ K  WTE R
Sbjct: 92  GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGR 149

[5][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
           RepID=Q7XYI7_BIGNA
          Length = 237

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 52/114 (45%), Positives = 68/114 (59%)
 Frame = +1

Query: 46  GVASRRGAVVVRASGESRRAGLGGLLASAVAGVAPKAGLALTPVDLFDDRSVRERGFDLI 225
           GV+ R    V  A+   RRA LGGL  +A  G A K+  AL  V L DDR  ++ GF++I
Sbjct: 56  GVSCRN---VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLIDDRKAKKNGFEII 111

Query: 226 YEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSDWTEAR 387
           YEARDL L Q+ R+G TQAR  L ETKKR   +E ++  +   F+ K  W+E R
Sbjct: 112 YEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDKKYWSEGR 164

[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
           sp. RCC299 RepID=C1EI28_9CHLO
          Length = 205

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
 Frame = +1

Query: 61  RGAVVVRASGESRRAGLGGLLASAVAGVAPKAGLALTPVDLFDDRSVRERGFDLIYEARD 240
           + +V V AS ++R+A    LLA+ V  +     +AL  ++L D+R   + G  LIYEARD
Sbjct: 26  KASVAVTASADARKAA--SLLAAGVIALQATPAMALNMIELQDERQTNKNGLQLIYEARD 83

Query: 241 LDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQKSDWTEA 384
           L++ Q+VR+     F+  + +  +T  R  ES  R++ D+  ++ K+ WT+A
Sbjct: 84  LNITQSVRQDGNSRFSFQKLTTAQTATRASESIKRLNTDVGEYVGKAYWTQA 135

[7][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
           enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S8C8_OSTLU
          Length = 204

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +1

Query: 16  ALASKVATRPGVASRRGAVVVRASGESRRAGLGGLLASAVAGVAPKAGLALTPVDLFDDR 195
           A+A K+ T   V +     VV+AS  ++   L  + A  ++  A  A  A T ++L D R
Sbjct: 14  AIAQKITTSKSVKAN---TVVKASA-NKAVSLAAVTAVVLS--ATPAAFAATGIELTDKR 67

Query: 196 SVRERGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQ 363
              + G  LIYEARDL+L Q  R      F+  + S  ET  R  ES  RI+ D+  ++ 
Sbjct: 68  VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127

Query: 364 KSDWTEA 384
           K  WT+A
Sbjct: 128 KKYWTQA 134

[8][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
           pusilla CCMP1545 RepID=C1N657_9CHLO
          Length = 205

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
 Frame = +1

Query: 31  VATRPGVASRRGAVVVRASGESRRAGLGGLLASAVAGV---APKAGLALTPVDLFDDRSV 201
           V   P V       VV  +  S++A     ++ AVAGV   +    LAL  ++L D R  
Sbjct: 16  VVAAPAVRKAEKVSVVVKADMSKKA-----VSLAVAGVVAFSAMPALALNQIELQDKRVT 70

Query: 202 RERGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQKS 369
            + G  LIYEARDL++ ++ R+     F   + + ++TK R  ES  RI+ D+  +++K+
Sbjct: 71  NKEGLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKA 130

Query: 370 DWTEA 384
            W++A
Sbjct: 131 YWSQA 135

[9][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
           Tax=Monodelphis domestica RepID=UPI0000F2DB84
          Length = 2785

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSR---PGKREPG*SPPGRSGAGPGRGPRRSGRSR 209
           P+ R S    P +RR   +TP+R   SR   P +R      P R  +      RR GRSR
Sbjct: 598 PARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRTRSPARRGGRSR 657

Query: 208 AREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT--RRRRAQPRHPGGRPRRGG* 35
           +R P+  R GR  S      G R R R+PA R   R  T  RR R + R P  R R    
Sbjct: 658 SRTPA-RRGGRSRSRTPARRGGRSRSRTPARRGRSRSRTPARRGRTRSRTPARRGRSRTR 716

Query: 34  QP*RRGPS 11
            P RRG S
Sbjct: 717 SPVRRGRS 724

[10][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
           Tax=Magnetospirillum magnetotacticum MS-1
           RepID=UPI0000383963
          Length = 551

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
 Frame = -3

Query: 385 EPPSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPPGRSGAGPGRGPRRSGRSRA 206
           +PPS + +  T   + R  P+ P      RPG+R+      G+ G G GRG  R+  +R 
Sbjct: 416 QPPSRQEAQETAAEEARRPPRQPQ----GRPGQRQGRPGGRGQEGRGEGRGEHRAHEARG 471

Query: 205 REPSGHRTGRRGSEQGQPWGPR-RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG 38
             P G + G R  ++    GPR   QRS   RP   G  R + A+P+  GGRP   RRG 
Sbjct: 472 GRPGG-QPGHRQDQRQDSRGPRPDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGD 528

Query: 37  *QP*RRG 17
            +P R G
Sbjct: 529 ARPARSG 535

[11][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0000DC1A1B
          Length = 491

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 263 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRSPVRR 322

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 323 RSRSRSQARRSGRS 336

[12][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
           Tax=Rattus norvegicus RepID=UPI0000DA333B
          Length = 2707

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 570 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRSPVRR 629

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 630 RSRSRSQARRSGRS 643

[13][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
           RepID=UPI0000484FB6
          Length = 2703

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 571 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 630

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 631 RSRSRSQARRSGRS 644

[14][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
           RepID=Q3TR34_MOUSE
          Length = 493

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 265 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 324

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 325 RSRSRSQARRSGRS 338

[15][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Mus musculus RepID=Q8BTI8-3
          Length = 2603

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 571 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRSPVRR 630

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 631 RSRSRSQARRSGRS 644

[16][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
           RepID=SRRM2_MOUSE
          Length = 2703

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 571 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRSPVRR 630

Query: 52  PRRGG*QP*RRGPS 11
             R   Q  R G S
Sbjct: 631 RSRSRSQARRSGRS 644

[17][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
           splicing factor-related nuclear matrix protein of 300
           kDa) (Ser/Arg- related nuclear matrix protein)
           (SR-related nuclear matrix protein of 300 kDa) (Splicing
           coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
           familiaris RepID=UPI000184A2B2
          Length = 2682

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 50/142 (35%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPPGRSGAGP 242
           P+ R S    P +RR   +TP+R   SR                +R    SP  RSG   
Sbjct: 521 PARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 580

Query: 241 GRGPRRSGRSRAREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR-----RRRA 77
            R P R GRSR+R P+     RRG  + +   P RR RS +  PA RG +R     RRR+
Sbjct: 581 SRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPARRRS 633

Query: 76  QPRHPGGRPRRGG*QP*RRGPS 11
           + R    R R     P RRG S
Sbjct: 634 RSRSVVRRGRSHSRTPQRRGRS 655

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 446 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 505

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 506 RSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 565

Query: 52  PRR 44
             R
Sbjct: 566 RSR 568

[18][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
            RepID=B4VB08_9ACTO
          Length = 1612

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
 Frame = -3

Query: 349  PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPPGRSGAGPGRGPRRSGRSRARE 200
            PG RR   + P RA           + PG+R +P     GR+  GPG  P R  R+    
Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528

Query: 199  PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 41
            P  HR  R G+ + +P G RRR R PA R  PR   R RR   R PG RPR+G
Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578

[19][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
           RepID=Q9UQ39_HUMAN
          Length = 956

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 479 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 538

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 539 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 598

Query: 52  PRR 44
             R
Sbjct: 599 RSR 601

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPPGRSGAGP 242
           P+ R S    P +RR   +TP+R   SR                +R    SP  RSG   
Sbjct: 554 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 613

Query: 241 GRGPRRSGRSRAREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRH 65
            R P R GRSR+R P+  R GR  S        R R R+PA R   R  T RR R++ R 
Sbjct: 614 SRTPARRGRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRS 671

Query: 64  PGGRPRRGG*QP*RRGPS 11
              R R     P RRG S
Sbjct: 672 LVRRGRSHSRTPQRRGRS 689

[20][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Homo sapiens RepID=Q9UQ35-2
          Length = 2334

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633

Query: 52  PRR 44
             R
Sbjct: 634 RSR 636

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPPGRSGAGP 242
           P+ R S    P +RR   +TP+R   SR                +R    SP  RSG   
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648

Query: 241 GRGPRRSGRSRAREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRH 65
            R P R GRSR+R P+  R GR  S        R R R+PA R   R  T RR R++ R 
Sbjct: 649 SRTPARRGRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRS 706

Query: 64  PGGRPRRGG*QP*RRGPS 11
              R R     P RRG S
Sbjct: 707 LVRRGRSHSRTPQRRGRS 724

[21][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
           RepID=SRRM2_HUMAN
          Length = 2752

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633

Query: 52  PRR 44
             R
Sbjct: 634 RSR 636

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPPGRSGAGP 242
           P+ R S    P +RR   +TP+R   SR                +R    SP  RSG   
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648

Query: 241 GRGPRRSGRSRAREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRH 65
            R P R GRSR+R P+  R GR  S        R R R+PA R   R  T RR R++ R 
Sbjct: 649 SRTPARRGRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRS 706

Query: 64  PGGRPRRGG*QP*RRGPS 11
              R R     P RRG S
Sbjct: 707 LVRRGRSHSRTPQRRGRS 724

[22][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179CC90
          Length = 2724

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
 Frame = -3

Query: 388 REPPSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPPGRSGAGPGRGPRRSGRS 212
           R   S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569

Query: 211 RAREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 53
           R+R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ R P  R
Sbjct: 570 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 629

Query: 52  PRR 44
             R
Sbjct: 630 RSR 632

[23][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4V2Y2_9ACTO
          Length = 576

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 51/136 (37%), Positives = 56/136 (41%), Gaps = 25/136 (18%)
 Frame = -3

Query: 352 RPGQRRCGPQTPSRASWSRPGKREPG*S-----PPGRSGAGP-GRGPRRSGRSRAREPSG 191
           RP  R   P  P  A   RPG+R PG +     P G    GP G  P R+G  R R P  
Sbjct: 24  RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRPGRAGAPRRRRPRP 83

Query: 190 HRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRGATR---RRRAQPR 68
              GRR   +G   GPRR                R+R    RPA R A R   RRR  PR
Sbjct: 84  -ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRAARRRDDRRRHHPR 142

Query: 67  HPGGRPRRGG*QP*RR 20
             G RPR     P RR
Sbjct: 143 PRGRRPRPPDGHPPRR 158

[24][TOP]
>UniRef100_B8JBA1 Transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter
           dehalogenans 2CP-1 RepID=B8JBA1_ANAD2
          Length = 613

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 44/129 (34%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
 Frame = -3

Query: 379 PSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPPGRSGAGPGRGPRRSGRSRARE 200
           P+   S    PG+R   P+   RA     G+R     PP R   G GR P R GR     
Sbjct: 336 PAGDASAPEWPGRRFARPERADRAPRGASGER-----PPRRRTPGTGRPPERGGRPPRTG 390

Query: 199 PSGHRTGRRGSEQGQPWGPR---RRQRSPADRPAPRGA------------TRRRRAQPRH 65
               RTG       QPW PR   RR   P   PA  GA             R  R+ P  
Sbjct: 391 DRPARTGAGRPAGPQPWRPRTPDRRGAGPGPGPARPGAGGGEGSPAAGASPRPARSGPGR 450

Query: 64  PGGRPRRGG 38
           PGG  R GG
Sbjct: 451 PGGFARPGG 459

[25][TOP]
>UniRef100_B5H4G2 Non-ribosomal peptide synthetase n=1 Tax=Streptomyces
            pristinaespiralis ATCC 25486 RepID=B5H4G2_STRPR
          Length = 3622

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 48/130 (36%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
 Frame = -3

Query: 352  RPGQRRCGPQTPSRASWSRPGKREPG*SPPGRSGAGPGRGPRRSGRSR--AREPSGHRTG 179
            RP +    P  P R        R+P    PGR      R P R+GR R  +R P G R G
Sbjct: 2945 RPVRTARQPDVPHRRPRPLAQGRQPRLPGPGRHAGEDPRLPYRTGRDRGGSRGPCGGRPG 3004

Query: 178  RRGSE-QGQPWGPRRRQR---SPADR---------------PAPRGATR-RRRAQPRHPG 59
            RRG+  QG+   P R +R    P DR               P P GA R RRRA  R  G
Sbjct: 3005 RRGARPQGRHRAPGRLRRPGERPRDRDRHRARHRPRIRPRCPRPAGAARARRRAAARVHG 3064

Query: 58   GRPRRGG*QP 29
             RPRR   +P
Sbjct: 3065 ARPRRTAGRP 3074

[26][TOP]
>UniRef100_UPI0001B56B0F YibE/F family protein n=1 Tax=Streptomyces sp. AA4
           RepID=UPI0001B56B0F
          Length = 601

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 50/132 (37%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
 Frame = -3

Query: 385 EPPSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SP--PGRS------------GA 248
           EPPSS      RP     GP+   RA   RP  REPG     PG S            GA
Sbjct: 23  EPPSSAVPPPVRPD----GPRRARRAEPGRPAAREPGRQADRPGNSERSAGRSGNTDHGA 78

Query: 247 GPGRGPRRSGRSRAREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPR 68
            PGR   R  RS     SG   GRR    G+P    RR R+ A RP   G    R AQP 
Sbjct: 79  EPGRSAERPERSGEPRRSG-APGRRDGRLGEP----RRPRATAPRPPQPGTP--RSAQPG 131

Query: 67  HPGGRPRRGG*Q 32
            P     R G Q
Sbjct: 132 TPRSADSRSGAQ 143

[27][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
            RepID=UPI00015FBA1A
          Length = 1848

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 46/122 (37%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
 Frame = -3

Query: 352  RPGQRRCGPQTPSRASWSRPGKREPG*SPPGRSGAGPGRG----PRRSGRSRAREPSGHR 185
            RPG RR  P+   R +  RP  R  G +P   +  GPGR      RR  R R R P    
Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130

Query: 184  TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RRGPS 11
                         PRRR      RP   G  RRR R  PR   GRPRRG G +P RR   
Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARRADR 1177

Query: 10   LL 5
             L
Sbjct: 1178 AL 1179

[28][TOP]
>UniRef100_A8X5G4 C. briggsae CBR-RSR-1 protein n=1 Tax=Caenorhabditis briggsae AF16
           RepID=A8X5G4_CAEBR
          Length = 581

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 44/113 (38%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
 Frame = -3

Query: 352 RPGQRRCGPQTPSRASWSRPG---KREPG*SPPGRSGAGPGRGPRR-SGRSRAREPSGHR 185
           R   R   P+   R S S P    K  P    PGRS +G  RGPR+ SG  R R  S   
Sbjct: 287 RRSPRGRSPEARRRQSGSPPRGARKGSPEAKKPGRSPSGSPRGPRKLSGSPRRRAASPEA 346

Query: 184 TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQP------RHPGGRPRR 44
              R S  G P   +RRQ  PA R  P G+  RRR+ P      R P   PRR
Sbjct: 347 RKPRRSPSGSP---KRRQAFPAARRPPSGSPPRRRSPPAASKFGRSPPESPRR 396