AV619169 ( LC004f11_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV619169  LC004f11_r
         (530 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8J431 Stress-related chlorophyll a/b binding protein ...   352   9e-96
UniRef100_P93664 LI818r-1 protein n=1 Tax=Chlamydomonas reinhard...   272   9e-72
UniRef100_P93663 LI818r-1 protein (Fragment) n=1 Tax=Chlamydomon...   234   4e-60
UniRef100_Q03965 Chlorophyll a-b binding protein L1818, chloropl...   202   9e-51
UniRef100_A9SNV6 Predicted protein n=1 Tax=Physcomitrella patens...   184   3e-45
UniRef100_A9TED6 Predicted protein n=1 Tax=Physcomitrella patens...   184   3e-45
UniRef100_A3QQQ0 Chloroplast LI818 protein n=1 Tax=Scenedesmus o...   184   3e-45
UniRef100_A2SY28 LI818-1 protein n=2 Tax=Mesostigma viride RepID...   121   3e-26
UniRef100_O65927 Fucoxanthin chlorophyll a/c binding protein n=1...   112   2e-23
UniRef100_O65892 Fucoxanthin chlorophyll a/c binding protein n=1...   112   2e-23
UniRef100_B8CGG0 Fucoxanthin chlorophyll a/c protein, LI818 clad...   112   2e-23
UniRef100_B8CGG2 Fucoxanthin chlorophyll a/c protein, LI818 clad...   112   2e-23
UniRef100_B7FVF9 Protein fucoxanthin chlorophyll a/c protein n=1...   110   5e-23
UniRef100_O65891 Fucoxanthin chlorophyll a/c binding protein (Fr...   109   1e-22
UniRef100_Q7XYJ1 Chlorophyll a/b-binding protein LI818 2 n=1 Tax...   108   3e-22
UniRef100_A4QPJ1 Chloroplast protein LI818;2.2 (Fragment) n=1 Ta...   108   3e-22
UniRef100_B7FR60 Protein fucoxanthin chlorophyll a/c protein n=1...   106   9e-22
UniRef100_B7FYL0 Protein fucoxanthin chlorophyll a/c protein n=1...   105   3e-21
UniRef100_A2SY29 LI818-2 protein (Fragment) n=1 Tax=Mesostigma v...   102   2e-20
UniRef100_A4RXC5 Fucoxanthin chlorophyll a/c binding protein-lik...   100   5e-20
UniRef100_Q7XYJ2 Chlorophyll a/b-binding protein LI818 1 (Fragme...   100   6e-20
UniRef100_A4QPI7 Chloroplast protein LI818;3 n=1 Tax=Bigelowiell...   100   6e-20
UniRef100_B8BSG2 Fucoxanthin chlorophyll a/c protein, LI818 clad...   100   1e-19
UniRef100_Q39709 Fucoxanthin-chlorophyll a-c binding protein, ch...   100   1e-19
UniRef100_B7G6N3 Protein fucoxanthin chlorophyll a/c protein n=1...    99   2e-19
UniRef100_Q3B9U1 Chloroplast protein LI818R n=1 Tax=Ostreococcus...    98   3e-19
UniRef100_Q019J1 Fucoxanthin chlorophyll a/c binding protein (IS...    98   3e-19
UniRef100_C1MIN8 Chlorophyll a/b-binding protein-like protein, c...    97   7e-19
UniRef100_C1N5Z4 Chlorophyll a/b-binding protein n=1 Tax=Micromo...    96   2e-18
UniRef100_Q2IA70 Chloroplast light harvesting protein isoform 9 ...    95   3e-18
UniRef100_Q2IA71 Chloroplast light harvesting protein isoform 8 ...    93   1e-17
UniRef100_A4QPN4 Chloroplast light-harvesting complex protein LI...    92   2e-17
UniRef100_A4QPP0 Chloroplast light-harvesting complex protein LI...    92   2e-17
UniRef100_C1EI81 Chlorophyll a/b-binding protein n=1 Tax=Micromo...    89   1e-16
UniRef100_C1E3Q9 Chlorophyll a/b-binding protein-like protein, c...    89   1e-16
UniRef100_Q2IA69 Chloroplast light harvesting protein isoform 10...    89   2e-16
UniRef100_Q2IA35 Chloroplast light harvesting protein isoform 7 ...    87   7e-16
UniRef100_Q2IA37 Chloroplast light harvesting protein isoform 5 ...    85   3e-15
UniRef100_C1N3R3 Predicted protein (Fragment) n=1 Tax=Micromonas...    84   6e-15
UniRef100_A7YXS8 Chloroplast light harvesting protein isoform 6 ...    82   3e-14
UniRef100_Q2IA36 Chloroplast light harvesting protein isoform 6 ...    79   3e-13
UniRef100_O81933 Fucoxanthin chlorophyll a/c binding protein n=1...    79   3e-13
UniRef100_A7YXS7 Chloroplast light harvesting protein isoform 5-...    79   3e-13
UniRef100_Q2IA40 Chloroplast light harvesting protein isoform 2 ...    76   1e-12
UniRef100_Q2IA39 Chloroplast light harvesting protein isoform 3 ...    76   1e-12
UniRef100_Q2IA38 Chloroplast light harvesting protein isoform 4 ...    75   3e-12
UniRef100_A7YXS6 Chloroplast light harvesting protein isoform 4 ...    75   3e-12
UniRef100_A7YXS5 Chloroplast light harvesting protein isoform 4 ...    75   3e-12
UniRef100_A3E3Y3 Chloroplast light harvesting protein isoform 4 ...    75   3e-12
UniRef100_B8CGG1 Fucoxanthin chlorophyll a/c protein, LI818 clad...    73   1e-11
UniRef100_B8C364 Fucoxanthin chlorophyll a/c protein, LI818 clad...    72   3e-11
UniRef100_Q2IA41 Chloroplast light harvesting protein isoform 1 ...    67   8e-10
UniRef100_A3E4E2 Chlorophyll a-b binding protein n=1 Tax=Karlodi...    67   8e-10
UniRef100_Q2IA68 Chloroplast light harvesting protein isoform 11...    62   2e-08
UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivat...    59   2e-07
UniRef100_B5YLU3 Fucoxanthin chlorophyll a/c protein-LI818 clade...    58   5e-07
UniRef100_Q2IA34 Chloroplast light harvesting protein isoform 6 ...    57   1e-06
UniRef100_Q2IA27 Chloroplast light harvesting protein isoform 13...    57   1e-06
UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protei...    56   1e-06
UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bo...    54   5e-06
UniRef100_O76182 Light-harvesting polyprotein (Fragment) n=1 Tax...    54   5e-06
UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sap...    54   5e-06
UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matri...    54   5e-06
UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1...    54   5e-06
UniRef100_Q08587 Fucoxanthin-chlorophyll a-c binding protein D, ...    54   5e-06
UniRef100_Q2IA33 Chloroplast light harvesting protein isoform 7 ...    54   9e-06
graphical overview:
alignment
UniRef100_A8J431 UniRef100_A8J431 UniRef100_P93664 UniRef100_P93664 UniRef100_P93663 UniRef100_P93663 UniRef100_Q03965 UniRef100_Q03965 UniRef100_A9SNV6 UniRef100_A9SNV6 UniRef100_A9TED6 UniRef100_A9TED6 UniRef100_A3QQQ0 UniRef100_A3QQQ0 UniRef100_A2SY28 UniRef100_A2SY28 UniRef100_O65927 UniRef100_O65927 UniRef100_O65892 UniRef100_O65892 UniRef100_B8CGG0 UniRef100_B8CGG0 UniRef100_B8CGG2 UniRef100_B8CGG2 UniRef100_B7FVF9 UniRef100_B7FVF9 UniRef100_O65891 UniRef100_O65891 UniRef100_Q7XYJ1 UniRef100_Q7XYJ1 UniRef100_A4QPJ1 UniRef100_A4QPJ1 UniRef100_B7FR60 UniRef100_B7FR60 UniRef100_B7FYL0 UniRef100_B7FYL0 UniRef100_A2SY29 UniRef100_A2SY29 UniRef100_A4RXC5 UniRef100_A4RXC5 UniRef100_Q7XYJ2 UniRef100_Q7XYJ2 UniRef100_A4QPI7 UniRef100_A4QPI7 UniRef100_B8BSG2 UniRef100_B8BSG2 UniRef100_Q39709 UniRef100_Q39709 UniRef100_B7G6N3 UniRef100_B7G6N3 UniRef100_Q3B9U1 UniRef100_Q3B9U1 UniRef100_Q019J1 UniRef100_Q019J1 UniRef100_C1MIN8 UniRef100_C1MIN8 UniRef100_C1N5Z4 UniRef100_C1N5Z4 UniRef100_Q2IA70 UniRef100_Q2IA70 UniRef100_Q2IA71 UniRef100_Q2IA71 UniRef100_A4QPN4 UniRef100_A4QPN4 UniRef100_A4QPP0 UniRef100_A4QPP0 UniRef100_C1EI81 UniRef100_C1EI81 UniRef100_C1E3Q9 UniRef100_C1E3Q9 UniRef100_Q2IA69 UniRef100_Q2IA69 UniRef100_Q2IA35 UniRef100_Q2IA35 UniRef100_Q2IA37 UniRef100_Q2IA37 UniRef100_C1N3R3 UniRef100_C1N3R3 UniRef100_A7YXS8 UniRef100_A7YXS8 UniRef100_Q2IA36 UniRef100_Q2IA36 UniRef100_O81933 UniRef100_O81933 UniRef100_A7YXS7 UniRef100_A7YXS7 UniRef100_Q2IA40 UniRef100_Q2IA40 UniRef100_Q2IA39 UniRef100_Q2IA39 UniRef100_Q2IA38 UniRef100_Q2IA38 UniRef100_A7YXS6 UniRef100_A7YXS6 UniRef100_A7YXS5 UniRef100_A7YXS5 UniRef100_A3E3Y3 UniRef100_A3E3Y3 UniRef100_B8CGG1 UniRef100_B8CGG1 UniRef100_B8C364 UniRef100_B8C364 UniRef100_Q2IA41 UniRef100_Q2IA41 UniRef100_A3E4E2 UniRef100_A3E4E2 UniRef100_Q2IA68 UniRef100_Q2IA68 UniRef100_UPI0000F2DB84 UniRef100_UPI0000F2DB84 UniRef100_B5YLU3 UniRef100_B5YLU3 UniRef100_Q2IA34 UniRef100_Q2IA34 UniRef100_Q2IA27 UniRef100_Q2IA27 UniRef100_UPI000184A2B2 UniRef100_UPI000184A2B2 UniRef100_UPI000179CC90 UniRef100_UPI000179CC90 UniRef100_O76182 UniRef100_O76182 UniRef100_Q9UQ39 UniRef100_Q9UQ39 UniRef100_Q9UQ35-2 UniRef100_Q9UQ35-2 UniRef100_Q9UQ35 UniRef100_Q9UQ35 UniRef100_Q08587 UniRef100_Q08587