AV619027 ( LC002g07_r )

[UP]


[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8I003_CHLRE
          Length = 260

 Score =  249 bits (636), Expect = 7e-65
 Identities = 134/134 (100%), Positives = 134/134 (100%)
 Frame = +1

Query: 70  MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 249
           MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA
Sbjct: 1   MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60

Query: 250 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 429
           SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA
Sbjct: 61  SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120

Query: 430 VPAAVGMGAAASLL 471
           VPAAVGMGAAASLL
Sbjct: 121 VPAAVGMGAAASLL 134

 Score =  125 bits (314), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189

Query: 424 RAVPAAVGMGAAASLL 471
           RAVPAAVGMGAAASLL
Sbjct: 190 RAVPAAVGMGAAASLL 205

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260

[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
           Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
          Length = 354

 Score =  164 bits (415), Expect = 3e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +1

Query: 214 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 393
           VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1   VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60

Query: 394 QLNQMDAKNKRAVPAAVGMGAAASLL 471
           QLNQMDAKNKRAVPAAVGMGAAASLL
Sbjct: 61  QLNQMDAKNKRAVPAAVGMGAAASLL 86

 Score =  125 bits (314), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82  AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141

Query: 424 RAVPAAVGMGAAASLL 471
           RAVPAAVGMGAAASLL
Sbjct: 142 RAVPAAVGMGAAASLL 157

 Score =  125 bits (314), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212

Query: 424 RAVPAAVGMGAAASLL 471
           RAVPAAVGMGAAASLL
Sbjct: 213 RAVPAAVGMGAAASLL 228

 Score =  125 bits (314), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283

Query: 424 RAVPAAVGMGAAASLL 471
           RAVPAAVGMGAAASLL
Sbjct: 284 RAVPAAVGMGAAASLL 299

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = +1

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 423
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354

[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MZ88_9CHLO
          Length = 279

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
 Frame = +1

Query: 43  ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 222
           ++ +P L    + R+S     + R         LPVR A   V   A A  +    ++G 
Sbjct: 3   SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62

Query: 223 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 399
            A L+   A  +    A AA+E L+ +A  D+RA I   +L P +GWV +NI      Q 
Sbjct: 63  TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122

Query: 400 NQMDAKN---KRAVPAAVGMGAAA 462
           N M  KN   K+ +P  +G+ AAA
Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAA 146

[4][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9U315_PHYPA
          Length = 137

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = +1

Query: 214 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 393
           V  V T  ++ A+   + +A A+ ++ +LA  DNR   L   L+P +GWV FNI   LQ 
Sbjct: 2   VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58

Query: 394 QLNQMD-AKNKRAVPAAVGMGAAASLL 471
            LNQ+D  +  +A+ A  G+GAAA+L+
Sbjct: 59  ALNQVDKMRGAKALVAGAGLGAAATLM 85

[5][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7Y4_9CHLO
          Length = 191

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +1

Query: 238 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 411
           S AA   M   A AATE   LA  D R  I     VPVLGWVG+NI G    QL +M  D
Sbjct: 56  SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114

Query: 412 AKNKRAVPAAVGMGAAA 462
           A  K+ V A VG+ AAA
Sbjct: 115 AAKKKGVAAGVGLSAAA 131

[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
           n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
          Length = 265

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 49/137 (35%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
 Frame = +1

Query: 64  VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 243
           V + ALR S     A R   R AK     R A+ S V    A+ E             S+
Sbjct: 5   VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57

Query: 244 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 420
           AA+ + A  A AA E+  LA  D R  I   +  PVLGWV +NI G    Q   M  KN 
Sbjct: 58  AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116

Query: 421 -KRAVPAAVGMGAAASL 468
             + V A  G+ AAA L
Sbjct: 117 KSKGVLAGAGLSAAALL 133

[7][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
           RepID=B6SUJ7_MAIZE
          Length = 196

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
 Frame = +1

Query: 61  LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 234
           +  +A + +  P     RS+  S    + +R   R+    V A  S    G     +A+ 
Sbjct: 1   MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60

Query: 235 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 414
            +  A+  +A  A AA      A SDNR  +L  ++ P +GWV +NI   LQ  LNQ++ 
Sbjct: 61  DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112

Query: 415 KNKRAVPAAVGMGAAAS 465
              +AV A +G+GAAA+
Sbjct: 113 MRSQAVVAGLGLGAAAA 129

[8][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
           Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
          Length = 416

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
 Frame = +1

Query: 79  LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 258
           + + A   A  R + R+A+    + RA  S VV  + + +    + G  A +++ AAS  
Sbjct: 9   ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67

Query: 259 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 423
            A  A AA EL   A  D R  I   +  PVLGWV +NI      QL  M A N     K
Sbjct: 68  FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126

Query: 424 RAVPAAVGMGAAASLL 471
           RA  A  G   A++L+
Sbjct: 127 RAAGALAGGLTASALM 142

[9][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
           subsp. patens RepID=A9SPH7_PHYPA
          Length = 368

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 31/79 (39%), Positives = 42/79 (53%)
 Frame = +1

Query: 211 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 390
           K G +  L    AS  +A +A AA E+A+LA SD+R  I+  LL+P +GWV FNI     
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264

Query: 391 AQLNQMDAKNKRAVPAAVG 447
            Q+N +   N    P   G
Sbjct: 265 NQINNIVEGNDTGAPVKRG 283

[10][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
           RepID=B6SQV2_MAIZE
          Length = 191

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +1

Query: 61  LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 234
           +  MA L+ +A  +A    S  S    L VR  +A +   +   AS    G      A L
Sbjct: 4   IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57

Query: 235 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 414
           +++A+S     +A  A   A+ A  D+R  +L  ++ P +GWV +NI      QLN+M  
Sbjct: 58  AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111

Query: 415 KNKRAVPAAVGMGAAAS 465
           ++ +AV A +G+GAAA+
Sbjct: 112 RSSQAVAAGLGLGAAAA 128