AV396929 ( CL68h07_r )

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[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8I9W8_CHLRE
          Length = 270

 Score =  305 bits (782), Expect = 1e-81
 Identities = 152/153 (99%), Positives = 152/153 (99%)
 Frame = +2

Query: 77  MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLA 256
           MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQ DQSVDPTRVSISGAAYSVNLA
Sbjct: 1   MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLA 60

Query: 257 VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 436
           VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP
Sbjct: 61  VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 120

Query: 437 PPMGTPYGLRPADSLQHVYPLMTTSLPTQSVLT 535
           PPMGTPYGLRPADSLQHVYPLMTTSLPTQSVLT
Sbjct: 121 PPMGTPYGLRPADSLQHVYPLMTTSLPTQSVLT 153

[2][TOP]
>UniRef100_A8JED3 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JED3_CHLRE
          Length = 206

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
 Frame = +2

Query: 134 GKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 313
           G+ G+T+KALQT+TGA IQ DQ                      + DI+RG+FKGFALLR
Sbjct: 35  GRDGDTIKALQTFTGALIQIDQ----------------------VHDIVRGTFKGFALLR 72

Query: 314 QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLY----DDRTAPPPMGTPYGLRPADSL 481
           QAT  +N     P     +PVYAPGYGL+P SQLY    D  +A  PM      +P   +
Sbjct: 73  QATGHSNRG---PQPLSNKPVYAPGYGLVPPSQLYGGTGDIASAQVPM------QPLQPM 123

Query: 482 QHVYPLMTTSLP 517
           Q    + TT LP
Sbjct: 124 Q----MSTTPLP 131

[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
          Length = 1640

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
 Frame = +2

Query: 86   QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSV-DPTRVSISGAAYSVNLAVS 262
            ++ ++ECP++MVGRVIGK GET+K LQ ++GA +Q DQ+V DP  V I+GA  SV  A  
Sbjct: 1453 ESRIVECPKNMVGRVIGKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAE 1512

Query: 263  IITDIIRGSFKGFALLRQ-------------ATRPANGRNGYP-AFTEPRPVYAPGYGLI 400
             +  II G       + Q             A     G  GYP A       Y PGYG  
Sbjct: 1513 AVAAIIAGGPTAQYAVPQAGAGYGGGYGGYGAIGGYGGYGGYPQAAAAAYAGYYPGYGAY 1572

Query: 401  P 403
            P
Sbjct: 1573 P 1573

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
 Frame = +2

Query: 98   MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSV--DPTRVSISGAAYSVNLAVSIIT 271
            ++CP +MVGRVIGK GET+K +   +GA I  +QS+  D  +V I+GAA  V +A +++T
Sbjct: 1372 IDCPATMVGRVIGKGGETIKGMMAQSGAHIAMNQSLEGDVKKVVITGAAPCVAVAEALVT 1431

Query: 272  DII 280
             ++
Sbjct: 1432 RLL 1434

[4][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8T9_9CHLO
          Length = 156

 Score = 73.6 bits (179), Expect = 9e-12
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = +2

Query: 95  VMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITD 274
           ++ECP+ MVGRVIG+ GET+K LQ+ TGA IQ DQSV P  ++I+G  Y V+ A   + D
Sbjct: 95  IVECPKDMVGRVIGRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVD 154

Query: 275 II 280
           +I
Sbjct: 155 VI 156

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = +2

Query: 98  MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVD---PTRVSISGAAYSVNLAVSII 268
           ++CP  +VGRVIGK GET+K LQ  +GA I  DQ+     P ++SISG A  V++A  ++
Sbjct: 14  IDCPPGLVGRVIGKGGETIKGLQAQSGAHITIDQNYPDGAPRKISISGPAGCVDIASKLV 73

Query: 269 TDIIRG 286
            D+++G
Sbjct: 74  EDLLKG 79

[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
           Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
          Length = 511

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
 Frame = +2

Query: 95  VMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITD 274
           V+ECP++MVGR+IGK GET+K LQ    A+IQ DQS  P +V+I+G ++++  A   I D
Sbjct: 289 VLECPKTMVGRIIGKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIED 348

Query: 275 IIR--GSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPP--- 439
           +IR  G   G   +   +RP  G      +      Y  GYG   A   Y      P   
Sbjct: 349 LIRSTGPPPGGMGMGGGSRPPYGAPYGQQYPGGAGGYGGGYGGYGAPGGYGAPGGYPGYG 408

Query: 440 -----PMGTPYG 460
                P G PYG
Sbjct: 409 GYGGYPGGAPYG 420

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
 Frame = +2

Query: 47  AGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVD---PTR 217
           A  AP   QK       +ECP+ +VGRVIG+ GET++ LQ  +GA I  +Q        +
Sbjct: 194 AAPAPGEAQK------TLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQ 247

Query: 218 VSISGAAYSVNLAVSIITDIIRG 286
           ++ISG+  +V+ A S++ ++I G
Sbjct: 248 ITISGSQDAVDRAASMVQELIGG 270

[6][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
          Length = 393

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
 Frame = +2

Query: 53  NAPKSRQKMRTQNSV----MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQS---VDP 211
           NA + R ++  +N +    +ECP+SMVGR+IG+ GET+K+LQ  +GA +  DQS    +P
Sbjct: 116 NAERERLELERENEIVTRSLECPQSMVGRIIGRGGETIKSLQATSGAHVAIDQSGADGEP 175

Query: 212 TRVSISGAAYSVNLAVSIITDIIRGS 289
            RV+ISG   SV+ A  ++ +++ G+
Sbjct: 176 KRVTISGTRKSVDAASELVENLLLGT 201

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 31/98 (31%), Positives = 53/98 (54%)
 Frame = +2

Query: 98  MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDI 277
           +ECP+  VG++IG+ GET++ +Q  TGA +Q DQ+  P  V ++GA   V+    ++ +I
Sbjct: 218 IECPKERVGKIIGRGGETIRGIQAATGARLQIDQTRQPCVVMMAGAEACVDACTQVVNEI 277

Query: 278 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGY 391
           + G     A+  +  R   G  GY +     P  + G+
Sbjct: 278 LEGG--STAVFNEIARGGQG-FGYASSANAAPYASAGW 312

[7][TOP]
>UniRef100_A4S9R3 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S9R3_OSTLU
          Length = 249

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 32/99 (32%), Positives = 53/99 (53%)
 Frame = +2

Query: 98  MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDI 277
           +ECP+  VG++IG+ GET++ +QT TGA +Q DQ+  P +V ++G+   V     ++ +I
Sbjct: 78  IECPKESVGKLIGRGGETIRGIQTATGARMQIDQTRQPCQVILAGSEACVEAGAQVVQEI 137

Query: 278 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYG 394
           I G     A+  +  R   G  G     +     A G+G
Sbjct: 138 IDGG--STAVFNEIARGGQGFGGQGFGGQGYGAQAAGWG 174

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = +2

Query: 116 MVGRVIGKSGETVKALQTYTGATIQXDQSV---DPTRVSISGAAYSVNLAVSIITDIIRG 286
           MVGR+IG+ GET+K LQ  +GA +  DQ+V   +P +++I+GAA  V++A  ++ +++ G
Sbjct: 1   MVGRIIGRGGETIKGLQASSGAHVAIDQNVGEGEPRKITIAGAAACVDVASELVENLLLG 60

Query: 287 SFKGFALL 310
           +  G  LL
Sbjct: 61  TGVGGGLL 68

[8][TOP]
>UniRef100_B7G561 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7G561_PHATR
          Length = 1234

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 28/87 (32%), Positives = 50/87 (57%)
 Frame = +2

Query: 20  TAKVSTQRFAGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQ 199
           T  V  Q +  +A ++       N ++ C +  V  +IG+ G T+K +Q  +GA +  DQ
Sbjct: 736 TTSVRVQTYGVHADRASDTTGKGNHILTCDKRFVPLLIGRRGWTIKNIQDSSGARVDIDQ 795

Query: 200 SVDPTRVSISGAAYSVNLAVSIITDII 280
           +V P R++ISGA   V++AV ++ D++
Sbjct: 796 NVAPPRITISGAEEQVSIAVEMVRDVL 822

[9][TOP]
>UniRef100_C1N3L0 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3L0_9CHLO
          Length = 204

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +2

Query: 125 RVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDIIRG 286
           +VIG+ GET+K LQ  +GA +Q DQ+ DP +V +SG  Y V  A + + +I+ G
Sbjct: 5   KVIGRGGETIKGLQASSGARVQIDQTTDPCKVVVSGNPYCVEAAYAQVANIVAG 58

[10][TOP]
>UniRef100_C1N3L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3L1_9CHLO
          Length = 314

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +2

Query: 86  QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDP---TRVSISGAAYSVNLA 256
           + +++ CP S+VGRVIGK GET+K LQ  +GA +Q +Q         V ISG    V++A
Sbjct: 196 KTTIVPCPPSLVGRVIGKGGETIKGLQAQSGAHVQVNQDFPDGANREVIISGPGGCVDVA 255

Query: 257 VSIITDIIRG 286
             +I +++ G
Sbjct: 256 ERMIHELLSG 265