[UP]
[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I9W8_CHLRE
Length = 270
Score = 311 bits (798), Expect = 1e-83
Identities = 155/157 (98%), Positives = 155/157 (98%)
Frame = +3
Query: 66 MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLA 245
MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQ DQSVDPTRVSISGAAYSVNLA
Sbjct: 1 MRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLA 60
Query: 246 VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 425
VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP
Sbjct: 61 VSIITDIIRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAP 120
Query: 426 PPMGTPYGLRPADSLQHVYPLMTTSLPTQSVXTLPSD 536
PPMGTPYGLRPADSLQHVYPLMTTSLPTQSV TLPSD
Sbjct: 121 PPMGTPYGLRPADSLQHVYPLMTTSLPTQSVLTLPSD 157
[2][TOP]
>UniRef100_A8JED3 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8JED3_CHLRE
Length = 206
Score = 81.6 bits (200), Expect = 3e-14
Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Frame = +3
Query: 123 GKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 302
G+ G+T+KALQT+TGA IQ DQ + DI+RG+FKGFALLR
Sbjct: 35 GRDGDTIKALQTFTGALIQIDQ----------------------VHDIVRGTFKGFALLR 72
Query: 303 QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLY----DDRTAPPPMGTPYGLRPADSL 470
QAT +N P +PVYAPGYGL+P SQLY D +A PM +P +
Sbjct: 73 QATGHSNRG---PQPLSNKPVYAPGYGLVPPSQLYGGTGDIASAQVPM------QPLQPM 123
Query: 471 QHVYPLMTTSLP 506
Q + TT LP
Sbjct: 124 Q----MSTTPLP 131
[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
Length = 1640
Score = 74.3 bits (181), Expect = 5e-12
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Frame = +3
Query: 75 QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSV-DPTRVSISGAAYSVNLAVS 251
++ ++ECP++MVGRVIGK GET+K LQ ++GA +Q DQ+V DP V I+GA SV A
Sbjct: 1453 ESRIVECPKNMVGRVIGKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAE 1512
Query: 252 IITDIIRGSFKGFALLRQ-------------ATRPANGRNGYP-AFTEPRPVYAPGYGLI 389
+ II G + Q A G GYP A Y PGYG
Sbjct: 1513 AVAAIIAGGPTAQYAVPQAGAGYGGGYGGYGAIGGYGGYGGYPQAAAAAYAGYYPGYGAY 1572
Query: 390 P 392
P
Sbjct: 1573 P 1573
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +3
Query: 87 MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSV--DPTRVSISGAAYSVNLAVSIIT 260
++CP +MVGRVIGK GET+K + +GA I +QS+ D +V I+GAA V +A +++T
Sbjct: 1372 IDCPATMVGRVIGKGGETIKGMMAQSGAHIAMNQSLEGDVKKVVITGAAPCVAVAEALVT 1431
Query: 261 DII 269
++
Sbjct: 1432 RLL 1434
[4][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N8T9_9CHLO
Length = 156
Score = 73.6 bits (179), Expect = 9e-12
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +3
Query: 84 VMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITD 263
++ECP+ MVGRVIG+ GET+K LQ+ TGA IQ DQSV P ++I+G Y V+ A + D
Sbjct: 95 IVECPKDMVGRVIGRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVD 154
Query: 264 II 269
+I
Sbjct: 155 VI 156
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Frame = +3
Query: 87 MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVD---PTRVSISGAAYSVNLAVSII 257
++CP +VGRVIGK GET+K LQ +GA I DQ+ P ++SISG A V++A ++
Sbjct: 14 IDCPPGLVGRVIGKGGETIKGLQAQSGAHITIDQNYPDGAPRKISISGPAGCVDIASKLV 73
Query: 258 TDIIRG 275
D+++G
Sbjct: 74 EDLLKG 79
[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
Length = 511
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Frame = +3
Query: 84 VMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITD 263
V+ECP++MVGR+IGK GET+K LQ A+IQ DQS P +V+I+G ++++ A I D
Sbjct: 289 VLECPKTMVGRIIGKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIED 348
Query: 264 IIR--GSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPP--- 428
+IR G G + +RP G + Y GYG A Y P
Sbjct: 349 LIRSTGPPPGGMGMGGGSRPPYGAPYGQQYPGGAGGYGGGYGGYGAPGGYGAPGGYPGYG 408
Query: 429 -----PMGTPYG 449
P G PYG
Sbjct: 409 GYGGYPGGAPYG 420
Score = 53.5 bits (127), Expect = 9e-06
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +3
Query: 36 AGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVD---PTR 206
A AP QK +ECP+ +VGRVIG+ GET++ LQ +GA I +Q +
Sbjct: 194 AAPAPGEAQK------TLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQ 247
Query: 207 VSISGAAYSVNLAVSIITDIIRG 275
++ISG+ +V+ A S++ ++I G
Sbjct: 248 ITISGSQDAVDRAASMVQELIGG 270
[6][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
Length = 393
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Frame = +3
Query: 42 NAPKSRQKMRTQNSV----MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQS---VDP 200
NA + R ++ +N + +ECP+SMVGR+IG+ GET+K+LQ +GA + DQS +P
Sbjct: 116 NAERERLELERENEIVTRSLECPQSMVGRIIGRGGETIKSLQATSGAHVAIDQSGADGEP 175
Query: 201 TRVSISGAAYSVNLAVSIITDIIRGS 278
RV+ISG SV+ A ++ +++ G+
Sbjct: 176 KRVTISGTRKSVDAASELVENLLLGT 201
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/98 (31%), Positives = 53/98 (54%)
Frame = +3
Query: 87 MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDI 266
+ECP+ VG++IG+ GET++ +Q TGA +Q DQ+ P V ++GA V+ ++ +I
Sbjct: 218 IECPKERVGKIIGRGGETIRGIQAATGARLQIDQTRQPCVVMMAGAEACVDACTQVVNEI 277
Query: 267 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGY 380
+ G A+ + R G GY + P + G+
Sbjct: 278 LEGG--STAVFNEIARGGQG-FGYASSANAAPYASAGW 312
[7][TOP]
>UniRef100_A4S9R3 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S9R3_OSTLU
Length = 249
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/99 (32%), Positives = 53/99 (53%)
Frame = +3
Query: 87 MECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDI 266
+ECP+ VG++IG+ GET++ +QT TGA +Q DQ+ P +V ++G+ V ++ +I
Sbjct: 78 IECPKESVGKLIGRGGETIRGIQTATGARMQIDQTRQPCQVILAGSEACVEAGAQVVQEI 137
Query: 267 IRGSFKGFALLRQATRPANGRNGYPAFTEPRPVYAPGYG 383
I G A+ + R G G + A G+G
Sbjct: 138 IDGG--STAVFNEIARGGQGFGGQGFGGQGYGAQAAGWG 174
Score = 57.0 bits (136), Expect = 8e-07
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = +3
Query: 105 MVGRVIGKSGETVKALQTYTGATIQXDQSV---DPTRVSISGAAYSVNLAVSIITDIIRG 275
MVGR+IG+ GET+K LQ +GA + DQ+V +P +++I+GAA V++A ++ +++ G
Sbjct: 1 MVGRIIGRGGETIKGLQASSGAHVAIDQNVGEGEPRKITIAGAAACVDVASELVENLLLG 60
Query: 276 SFKGFALL 299
+ G LL
Sbjct: 61 TGVGGGLL 68
[8][TOP]
>UniRef100_B7G561 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G561_PHATR
Length = 1234
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/87 (32%), Positives = 50/87 (57%)
Frame = +3
Query: 9 TAKVSTQRFAGNAPKSRQKMRTQNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQ 188
T V Q + +A ++ N ++ C + V +IG+ G T+K +Q +GA + DQ
Sbjct: 736 TTSVRVQTYGVHADRASDTTGKGNHILTCDKRFVPLLIGRRGWTIKNIQDSSGARVDIDQ 795
Query: 189 SVDPTRVSISGAAYSVNLAVSIITDII 269
+V P R++ISGA V++AV ++ D++
Sbjct: 796 NVAPPRITISGAEEQVSIAVEMVRDVL 822
[9][TOP]
>UniRef100_C1N3L0 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N3L0_9CHLO
Length = 204
Score = 54.7 bits (130), Expect = 4e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 114 RVIGKSGETVKALQTYTGATIQXDQSVDPTRVSISGAAYSVNLAVSIITDIIRG 275
+VIG+ GET+K LQ +GA +Q DQ+ DP +V +SG Y V A + + +I+ G
Sbjct: 5 KVIGRGGETIKGLQASSGARVQIDQTTDPCKVVVSGNPYCVEAAYAQVANIVAG 58
[10][TOP]
>UniRef100_C1N3L1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N3L1_9CHLO
Length = 314
Score = 53.5 bits (127), Expect = 9e-06
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 75 QNSVMECPRSMVGRVIGKSGETVKALQTYTGATIQXDQSVDP---TRVSISGAAYSVNLA 245
+ +++ CP S+VGRVIGK GET+K LQ +GA +Q +Q V ISG V++A
Sbjct: 196 KTTIVPCPPSLVGRVIGKGGETIKGLQAQSGAHVQVNQDFPDGANREVIISGPGGCVDVA 255
Query: 246 VSIITDIIRG 275
+I +++ G
Sbjct: 256 ERMIHELLSG 265