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[1][TOP]
>UniRef100_UPI000192638B PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata
RepID=UPI000192638B
Length = 557
Score = 67.8 bits (164), Expect = 4e-10
Identities = 39/95 (41%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QC-P 307
P+A+PC PP PP PPP P CP P PPP P P PP C C P
Sbjct: 233 PSAAPCHPPAPPPCPPPPPPCPPPCPPPCPPPPPPPPPPPPPPPPPPPPPC---PPPCPP 289
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
PP P PPP C P P PPPPC
Sbjct: 290 PPPPCPPPPPPPPPCPP------PPPPPPPPPPPC 318
Score = 60.1 bits (144), Expect = 7e-08
Identities = 37/94 (39%), Positives = 37/94 (39%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P PC PP PP PPP P CP P PPP P P CPP P
Sbjct: 282 PCPPPCPPPPPPCPPPPPP--PPPCPPPPPPP--PPPPPP-----CPPPPPPPPPCPPPC 332
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
PP P PPP CP P PPPPC
Sbjct: 333 PPPCPPPCPPPPPPCPPP--PCPPPPCPPPPPPC 364
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/101 (35%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P PP PP PPP P CP P PPP P P CPP P
Sbjct: 259 PPCPPPPPPPPPPPPPPPPPPPPPCPPPCPPPPPPCPPPPPPPPPCPPP-------PPPP 311
Query: 303 TPPFPKTTSP-------PPRCCPTSGHRIPLRSASAPPPPC 202
PP P P PP C P P PPPPC
Sbjct: 312 PPPPPPCPPPPPPPPPCPPPCPPPCPPPCPPPPPPCPPPPC 352
[2][TOP]
>UniRef100_Q6TVP0 ORF080 virion core protein n=1 Tax=Orf virus RepID=Q6TVP0_ORFV
Length = 328
Score = 62.8 bits (151), Expect = 1e-08
Identities = 47/135 (34%), Positives = 53/135 (39%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P A+P P PA P P P CP PAP APA P AV CP P
Sbjct: 120 PPAAPACPAPAPACPAPVP----ACPAPAPACPAPAPACPAPAVTCPA--------PAPA 167
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
PP T PPP CP P R A A PP + RQ P T P+ +
Sbjct: 168 CPPATAPTCPPPAVCPA-----PARPAPACPP-----STRQCPPAPPLPTKPAPAAKPIF 217
Query: 123 RKLMVPSPSPGAKSC 79
+ +P P A SC
Sbjct: 218 LQQSLPPPQYPASSC 232
[3][TOP]
>UniRef100_UPI0001926FBD PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata
RepID=UPI0001926FBD
Length = 268
Score = 62.0 bits (149), Expect = 2e-08
Identities = 38/95 (40%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAH-CLNQQ*QCP 307
P C PP P APPP P P P PPP P P V+CPP C CP
Sbjct: 124 PPPPVCPPPPPMCAPPPPPPPPPPPPPPPPPPPPPPPPPPPPVVFCPPPPPCPPPPAPCP 183
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
PP P PPP P PL PPPPC
Sbjct: 184 PPPPPPPMCLPPPPPPPPPPPPCPL---PPPPPPC 215
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/96 (36%), Positives = 35/96 (36%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P PP PP PPP P P P PPP P P PP CL P
Sbjct: 147 PPPPPPPPPPPPPPPPPPPVVFCPPPPPCPPPPAPCPPPP-----PPPPMCLPPPPPPPP 201
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC 196
PP PPP C P P PPPP C
Sbjct: 202 PPPPCPLPPPPPPCPP------PPAPCPPPPPPPAC 231
[4][TOP]
>UniRef100_A9GCE7 Response regulator n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9GCE7_SORC5
Length = 464
Score = 61.2 bits (147), Expect = 3e-08
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYD-DQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LV D+ +S + + ++L EGY D +D +E AV++ +ER PD+VI D +D
Sbjct: 11 VLVVDDEASARSGLEKLLRQEGYTVDAAADGVE-AVEVAAERP--PDVVITDLKMPRMDG 67
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L+ L+ +P + V+V+ + G AV A++AGA DY+ KP+D
Sbjct: 68 VALLGKLREQDPALPVIVVTAFGDVTSAVLAMRAGAEDYLTKPVD 112
[5][TOP]
>UniRef100_UPI0000E49E39 PREDICTED: similar to Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E49E39
Length = 492
Score = 60.8 bits (146), Expect = 4e-08
Identities = 39/91 (42%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPP- 295
P P RPPA PPP RG P PA PP S P+AP + PP Q P PP
Sbjct: 291 PPLPNRPPAPPPPGN--SRGPPPPAVPPSRSYPSAPAPSRGLPPPPPPQSQYNAPPAPPP 348
Query: 294 -FPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P T++PPP P S P + S PPPP
Sbjct: 349 TRPMTSAPPPPPPPPSAPMPPPMNGSVPPPP 379
[6][TOP]
>UniRef100_UPI0000E49669 PREDICTED: similar to Wiskott-Aldrich syndrome
(eczema-thrombocytopenia), partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E49669
Length = 338
Score = 60.8 bits (146), Expect = 4e-08
Identities = 39/91 (42%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPP- 295
P P RPPA PPP RG P PA PP S P+AP + PP Q P PP
Sbjct: 137 PPLPNRPPAPPPPGN--SRGPPPPAVPPSRSYPSAPAPSRGLPPPPPPQSQYNAPPAPPP 194
Query: 294 -FPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P T++PPP P S P + S PPPP
Sbjct: 195 TRPMTSAPPPPPPPPSAPMPPPMNGSVPPPP 225
[7][TOP]
>UniRef100_Q6TW20 ORF080 virion core protein n=1 Tax=Orf virus RepID=Q6TW20_ORFV
Length = 324
Score = 60.5 bits (145), Expect = 6e-08
Identities = 47/136 (34%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCP-PAHCLNQQ*QCP 307
PAA+P PP P P P CP PAP P APAAP CP PA P
Sbjct: 121 PAAAPACPPAPACPAPACPAPAAPCPAPAPAPACPAPAAP-----CPAPA-------PAP 168
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQ 127
PP T PPP CP A A PP + RQ P T P+
Sbjct: 169 ACPPATAPTCPPPAACP----------APACPP-----STRQCPPAPPLPTKPAPAAKPV 213
Query: 126 WRKLMVPSPSPGAKSC 79
+ + +P P A SC
Sbjct: 214 FLQQSLPPPQYPASSC 229
[8][TOP]
>UniRef100_Q0C2M7 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC
15444 RepID=Q0C2M7_HYPNA
Length = 137
Score = 60.5 bits (145), Expect = 6e-08
Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPA--AP**AVWCPPAHCLNQQ*QC 310
P +P PP PPA PP PW R P+ P P GS PA AP CPPA + ++
Sbjct: 22 PRNTPRKPPSPPA--PPAPWVRSRLPISTPSPSGSRPALSAPRPTRKCPPAEQVLKERSA 79
Query: 309 PG-------TPPFPKTTSPPPRCCPTS----GHRIPLRSASAPPPP 205
P TP +T PPP P + R P SA PPP
Sbjct: 80 PAPTNPAWPTPAGKTSTDPPPPATPPAAPPPAPRNPASSAPRTPPP 125
[9][TOP]
>UniRef100_B4SHB7 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1
RepID=B4SHB7_PELPB
Length = 452
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV ++ E++ LS +GY TS EA+ + E V DIV+ D +
Sbjct: 5 ILVVEDEKVQLESIAGYLSKQGYHVLTSSRPVEALVIAREHAV--DIVLTDFKMPAMSGV 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+ AL+ LNP + V+++ + G A A++ GAVDY+ KP+D
Sbjct: 63 ELLDALKKLNPGIEVIIMTAYGSIESATEAMKLGAVDYITKPID 106
[10][TOP]
>UniRef100_C8QZZ9 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Desulfurivibrio alkaliphilus AHT2
RepID=C8QZZ9_9DELT
Length = 461
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/104 (30%), Positives = 63/104 (60%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + + ++L EGY+ T+ S EE +++ ++ D++I D +D
Sbjct: 4 ILVVDDEPNYLVILSELLRDEGYETFTAGSAEEGLEIARHTDL--DLIITDMRMPGMDGL 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ +NP++ V+++ + G AVAA++AGA +Y+ KP D
Sbjct: 62 ELLKTIKGINPSLPVIMITAFGEVDKAVAAMRAGAFNYLTKPFD 105
[11][TOP]
>UniRef100_B9M0Q9 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0Q9_GEOSF
Length = 452
Score = 59.3 bits (142), Expect = 1e-07
Identities = 34/104 (32%), Positives = 60/104 (57%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ +S + + L EGY+ Q + S EE + LF + + PD+VI D +D
Sbjct: 5 ILVIDDDNSLRRVLEYNLKEEGYEVQAASSGEEGLFLFGQSQ--PDLVITDMKMSGMDGL 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++K+++ +P V+++ + G AV A++AGA DY+ KP +
Sbjct: 63 MVLKSIKERSPETLVIIITAFGTVNIAVEAMKAGAYDYITKPFN 106
[12][TOP]
>UniRef100_B5YHK7 SasR n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347
RepID=B5YHK7_THEYD
Length = 462
Score = 59.3 bits (142), Expect = 1e-07
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ +E ++ +LS EGY+ T+ S+EEA K+ + E+ P+I++ D +
Sbjct: 4 LLIIDDEPLQREILLTILSEEGYNVYTASSLEEASKIIN--EILPEIILTDLKLGNQNGI 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+++ +L AV+V+ + G AV A++ GA DY+ KPLD
Sbjct: 62 EILNSLPEEPFRPAVIVITAFGTISSAVNAIKQGAFDYLTKPLD 105
[13][TOP]
>UniRef100_B9NS99 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Rhodobacteraceae bacterium KLH11
RepID=B9NS99_9RHOB
Length = 444
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/104 (31%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFSSAEDALKVLGPD--YPGIVISDIKMPGMDGI 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL+K L + T+ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QLLKKLMGADSTLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[14][TOP]
>UniRef100_Q7XUL1 Os04g0498700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XUL1_ORYSJ
Length = 508
Score = 58.9 bits (141), Expect = 2e-07
Identities = 50/161 (31%), Positives = 60/161 (37%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA + S PR PAAP PRP PAP S PA PP+ P
Sbjct: 76 PATNSSSSPRTPAAPAPRPPQPPPATSPAPTKPSSPPAPK------PPSPPAPSPSTTPS 129
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
+PP PK +SPPP PT+ P S AP P + P T P
Sbjct: 130 SPPAPKPSSPPPAATPTTKPSPPPSSPPAPRP----------SPPLPPRTPPP------- 172
Query: 123 RKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPATRLS 1
P P+ K P S+T +SP S +LS
Sbjct: 173 -----PPPAAAPKPSPSPPPAPTNSTTNSSSPSTSTPVQLS 208
[15][TOP]
>UniRef100_B0TGJ1 Putative uncharacterized protein n=1 Tax=Heliobacterium
modesticaldum Ice1 RepID=B0TGJ1_HELMI
Length = 256
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/94 (39%), Positives = 37/94 (39%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P PP PP PPP P R CP P PPP P P PP P
Sbjct: 43 PPPPPPPPPPPPPPPPPPPPPPRPCPPPPPPPPPPPPPPP------PPPP------PPPP 90
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
PP P PPPR CP P A PPPC
Sbjct: 91 PPPPPPPPPPPPRPCP------PPPPARPCPPPC 118
[16][TOP]
>UniRef100_Q74DJ6 Sigma-54 dependent DNA-binding response regulator n=1 Tax=Geobacter
sulfurreducens RepID=Q74DJ6_GEOSL
Length = 460
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/105 (35%), Positives = 61/105 (58%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VL+V D++S + + L EGYD T+ S EE ++LF ER P +V+ D +
Sbjct: 10 VLIVDDDVSL-RRVLEYNLQEEGYDVITAGSGEEGLRLFDERS--PALVVTDLKMPGMGG 66
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L++ ++ +P AV+V+ + G AV A++AGA DY+ KP +
Sbjct: 67 FRLLQEIKGRSPDTAVIVITAFGAVETAVDAMKAGAYDYITKPFN 111
[17][TOP]
>UniRef100_Q5LS76 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Ruegeria pomeroyi RepID=Q5LS76_SILPO
Length = 444
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEEALKVLGSE--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + ++ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGADSSLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[18][TOP]
>UniRef100_A8MGT2 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=A8MGT2_ALKOO
Length = 451
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/104 (25%), Positives = 63/104 (60%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ + + A+ + L EGY+ +++ ++ ++ E +YPD++++D ++D
Sbjct: 5 ILIIDDEKNMRWAIKKALEKEGYNIYEAENGQDGLEKLEE--IYPDLILLDLRMPVMDGM 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ ++ ++ +N + V++L + G AV A++ GA+DY+ KP D
Sbjct: 63 EALQRIKEINQDIPVIMLTAHGTMESAVEAMKLGALDYISKPFD 106
[19][TOP]
>UniRef100_D0CRG3 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CRG3_9RHOB
Length = 444
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/104 (31%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKVLGPD--YPGIVISDIKMPGMDGI 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL+K L + T+ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QLLKKLMGADSTLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[20][TOP]
>UniRef100_C1EA37 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EA37_9CHLO
Length = 1765
Score = 58.2 bits (139), Expect = 3e-07
Identities = 36/93 (38%), Positives = 39/93 (41%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P SP SPP PP+ PPP P P P PPP P P PP H P
Sbjct: 1081 PPPSPPSPPSPPSPPPPPP----PSPPPPPPPSPPPPRPPPPPSPPPPVHEPPPSPPPPP 1136
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+PP P +PPP P P S PPPP
Sbjct: 1137 SPPPPTPDAPPPSPPPPPPSPPPSPPPSPPPPP 1169
[21][TOP]
>UniRef100_B8IYV0 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774 RepID=B8IYV0_DESDA
Length = 453
Score = 58.2 bits (139), Expect = 3e-07
Identities = 36/107 (33%), Positives = 58/107 (54%)
Frame = +3
Query: 162 TVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNEL 341
T + LLV D+ + +E + +L GY T D+ EEAV L E D++++D
Sbjct: 5 TAVKLLVVDDDRNHREMLRALLEEWGYAPVTVDNGEEAVALCQESPF--DLILMDVRMGG 62
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
+ + +A++ NP + VL++ + AV AL+AGA DY+ KPL
Sbjct: 63 MSGIEATRAIKGYNPAIPVLIMTAYSDVANAVEALKAGAYDYLTKPL 109
[22][TOP]
>UniRef100_Q5ZDR5 Os01g0329300 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q5ZDR5_ORYSJ
Length = 759
Score = 57.8 bits (138), Expect = 4e-07
Identities = 35/94 (37%), Positives = 42/94 (44%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA P + P+PP+ P +P R P PPP AP PPAH P
Sbjct: 254 PAIPPAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLAP---TMPPPAHA-------PA 303
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
P P TT PP P + P S+S+PPPPC
Sbjct: 304 ETPAPPTT--PPALPPATTAPSPKNSSSSPPPPC 335
[23][TOP]
>UniRef100_B9FLI1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FLI1_ORYSJ
Length = 518
Score = 57.8 bits (138), Expect = 4e-07
Identities = 43/139 (30%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P SPP PP PP P + PVP+PPP S+P P V PP
Sbjct: 124 PPPPRSSPPPPPVYSPPPPVSSPPPPVPSPPPPVSSPPPP---VPSPPPPV--------S 172
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
+PP P ++ PPP P P S+PPPP H + P +++
Sbjct: 173 SPPPPVSSPPPPVSSPPPPVSSPPPPVSSPPPPVHSPPPPVSSPPPPASDVVYCTNTTRY 232
Query: 123 RKLMVPS--PSPGAKSCHL 73
P+ PS KSCH+
Sbjct: 233 PTCTSPAYCPSRCPKSCHM 251
[24][TOP]
>UniRef100_A2Y786 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Y786_ORYSI
Length = 493
Score = 57.8 bits (138), Expect = 4e-07
Identities = 43/139 (30%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P SPP PP PP P + PVP+PPP S+P P V PP
Sbjct: 99 PPPPRSSPPPPPVYSPPPPVSSPPPPVPSPPPPVSSPPPP---VPSPPPPV--------S 147
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
+PP P ++ PPP P P S+PPPP H + P +++
Sbjct: 148 SPPPPVSSPPPPVSSPPPPVSSPPPPVSSPPPPVHSPPPPVSSPPPPASDVVYCTNTTRY 207
Query: 123 RKLMVPS--PSPGAKSCHL 73
P+ PS KSCH+
Sbjct: 208 PTCTSPAYCPSRCPKSCHM 226
[25][TOP]
>UniRef100_B4R4D1 GD15883 n=1 Tax=Drosophila simulans RepID=B4R4D1_DROSI
Length = 293
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Frame = -2
Query: 462 PPR---PPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPF 292
PPR PP PPP P CP P PPP + P P C P PP
Sbjct: 59 PPRSEEPPCTPPPDPCTTTTCPPPPPPPCTTTTCPP-----PEPPPCTTTTCPPPDPPPC 113
Query: 291 PKTTSPPPRCCPTSGHRIP---LRSASAPPPPCHC*ARRQRAARAPCHTFP 148
TT PPP C T+ P + + PPPPC R PC P
Sbjct: 114 TTTTCPPPPPCITTTCPPPPPCITTTCPPPPPC----RTTTCTPPPCTRTP 160
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Frame = -2
Query: 471 PCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWC------PPAHCL 328
PC+PP P PPP P CP P PPP + P C PP C+
Sbjct: 66 PCTPPPDPCTTTTCPPPPPPPCTTTTCPPPEPPPCTTTTCPPPDPPPCTTTTCPPPPPCI 125
Query: 327 NQQ*QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPC 202
CP PP TT PPP C T+ P + PPPC
Sbjct: 126 TTT--CPPPPPCITTTCPPPPPCRTTTCTPP--PCTRTPPPC 163
[26][TOP]
>UniRef100_Q2LRW3 Response regulator containing sigma 54 interaction domain n=1
Tax=Syntrophus aciditrophicus SB RepID=Q2LRW3_SYNAS
Length = 457
Score = 57.8 bits (138), Expect = 4e-07
Identities = 34/103 (33%), Positives = 61/103 (59%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ S +++ +L EGY+ QT S EEA++L E P IV++D +D
Sbjct: 5 ILIVDDEESICKSLGDILVDEGYEVQTVQSGEEAIRLLDED--LPGIVLLDIWLPGIDGM 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
+++K +++L+P + V+++ G AV A + GA D++ KPL
Sbjct: 63 EVLKTIKSLHPKLPVVMMSGHGTIETAVKATKLGAFDFIEKPL 105
[27][TOP]
>UniRef100_Q1GTN5 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Sphingopyxis alaskensis
RepID=Q1GTN5_SPHAL
Length = 461
Score = 57.8 bits (138), Expect = 4e-07
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNEL 341
L +L+ D+ E V ++ EGY+ +T+ + A++ +R P + ++D
Sbjct: 3 LDILIVDDERDICELVAGVMEDEGYEARTASDSDSALEAIRQRR--PSLALIDVWLQGSR 60
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D L++A++A +PT+ ++V+ GG AVAA++ GA D++ KP +
Sbjct: 61 LDGLGLVEAIKAFDPTLPIIVISGHGGLDTAVAAIRRGAFDFIEKPFE 108
[28][TOP]
>UniRef100_B5YK18 Sporulation initiation phosphotransferase F n=1
Tax=Thermodesulfovibrio yellowstonii DSM 11347
RepID=B5YK18_THEYD
Length = 125
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/104 (28%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L+ GYD S EA+ + PD++I+D + D
Sbjct: 6 LLIIDDEQELVTTLAERLNLRGYDANGVTSFSEAITFIKQ---IPDVIILDIGLQDTDGL 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+++K ++ +NP++ V++L G +LQ GA DY++KP+D
Sbjct: 63 EVLKRIKEINPSIQVIMLSGYGDNERINKSLQNGAFDYLIKPVD 106
[29][TOP]
>UniRef100_B5RMV4 Response regulatory protein n=1 Tax=Borrelia duttonii Ly
RepID=B5RMV4_BORDL
Length = 451
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLVAD+ + +E + L EGY T+ EEA++ ++ D +I D + +
Sbjct: 4 LLVADDEKNIREGIATYLEEEGYFVFTASDGEEALETIQNEKI--DAIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ NP + ++L + G AV A++ GA D++ KP+D
Sbjct: 62 ELLKIVKDRNPNIPFIILTAHGTVDSAVDAMREGAYDFLTKPVD 105
[30][TOP]
>UniRef100_B2S1A4 Sigma-54-dependent transcriptional activator n=1 Tax=Borrelia
hermsii DAH RepID=B2S1A4_BORHD
Length = 451
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLVAD+ + +E + L EGY T+ EEA++ ++ D +I D + +
Sbjct: 4 LLVADDEKNIREGIATYLEEEGYFVFTASDGEEALETIENEKI--DAIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ NP + ++L + G AV A++ GA D++ KP+D
Sbjct: 62 ELLKIVKDKNPNIPFIILTAHGTVDSAVDAMREGAYDFLTKPVD 105
[31][TOP]
>UniRef100_A8ZYP0 Response regulator receiver protein n=1 Tax=Desulfococcus
oleovorans Hxd3 RepID=A8ZYP0_DESOH
Length = 301
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/108 (30%), Positives = 59/108 (54%)
Frame = +3
Query: 162 TVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNEL 341
T+ VL+V DE + + ++L G+D + + +EA+ +ER PD+V++D
Sbjct: 4 TIKVLMVDDE-AQFRATTEKLLRRRGFDIVLAANGKEAIAKMTER---PDVVVLDIKMPD 59
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D + +K + + P V++L GGP A A + GA++Y+ KP D
Sbjct: 60 MDGHETLKEIHKIRPAQPVVMLTGHGGPTSAQQAYEEGALNYLTKPCD 107
[32][TOP]
>UniRef100_B6WWQ0 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
29098 RepID=B6WWQ0_9DELT
Length = 523
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/104 (31%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ ++ ++L AEGY+ +T+ S EEA+ L RE P V++D +D
Sbjct: 4 ILIVDDDHHLRQGFQRLLDAEGYETRTAASAEEALNLM--REKMPQCVVMDVRMPGMDGL 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +K ++AL V+++ + A+ A + GA DYM+KP D
Sbjct: 62 EALKRMRALEGCPPVVIMTAYSTTETAIEATRLGAFDYMLKPFD 105
[33][TOP]
>UniRef100_Q89X06 Blr0521 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89X06_BRAJA
Length = 745
Score = 57.4 bits (137), Expect = 5e-07
Identities = 48/142 (33%), Positives = 55/142 (38%), Gaps = 3/142 (2%)
Frame = -2
Query: 483 PAASP--CSPPRPPAAPPPRPW-ARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*Q 313
PAA P +PP PPAAPPP R P P PPP + PA P PP
Sbjct: 67 PAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPP------PP--------- 111
Query: 312 CPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTF 133
P P PK SPPP P + A PPPP AR P T P+
Sbjct: 112 -PPPPAAPKQPSPPPAAAPQ-------QHAPTPPPPAPPAAR-------PAPTPPAPPPA 156
Query: 132 SQWRKLMVPSPSPGAKSCHLAP 67
+ + P P P A+ P
Sbjct: 157 AAPQHAPPPPPPPAARPTPTPP 178
[34][TOP]
>UniRef100_A5E8N9 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1
RepID=A5E8N9_BRASB
Length = 727
Score = 57.4 bits (137), Expect = 5e-07
Identities = 53/171 (30%), Positives = 63/171 (36%), Gaps = 14/171 (8%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**A-----VWCPPAH----- 334
P PPRP A PPP P R P APPP + P AP + V PP H
Sbjct: 94 PPPPRAEPPRPAAPPPPPPPPRAEPPHAAPPPSRAEPPAPPPSRPAPPVAAPPVHTPPPP 153
Query: 333 ----CLNQQ*QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARA 166
+ P TPP P + P R P + P + APPPP A QR
Sbjct: 154 APPPASPHEPARPATPPAPPPAAAPVRPTPPT----PPAATPAPPPPSSS-APNQRPGTP 208
Query: 165 PCHTFPSVWTFSQWRKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPA 13
P + P PSP A + P H +A SP +PA
Sbjct: 209 P--------------SPVTPPPSPPAAG-NAPPPAHTPPRSAAPSPQPTPA 244
[35][TOP]
>UniRef100_A8J1N3 Cell wall protein pherophorin-C10 (Fragment) n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J1N3_CHLRE
Length = 527
Score = 57.4 bits (137), Expect = 5e-07
Identities = 44/134 (32%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ +P +PP PP+ PP P P PPP P +P PP+ P
Sbjct: 259 PSPAPPNPPPPPSPAPPSPKPPSPEPPSPPPPPSPEPPSPKPPSPEPPSPQPPLPPPPPS 318
Query: 303 T-PPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARA---PCHTFPSVWT 136
PP P SPPP P P + +PPPPC C A + A P PS
Sbjct: 319 PYPPSPSPPSPPPPSPPPPSPAPPSPAPPSPPPPCECLAGERELTCAFLPPSPLPPSPAP 378
Query: 135 FSQWRKLMVPSPSP 94
S L P PSP
Sbjct: 379 PSPQPPLPPPPPSP 392
Score = 53.5 bits (127), Expect = 7e-06
Identities = 42/130 (32%), Positives = 44/130 (33%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P SPP PP PPP P P PPP P P A PP P
Sbjct: 207 PSPKPPSPPPPPGPPPPSPAPPSPSPPSPPPPSPQPPVPPSPAPPTPPGP--------PP 258
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
P P PPP P S S PPPP + P PS S
Sbjct: 259 PSPAPPNPPPPPSPAPPSPKPPSPEPPSPPPPP---------SPEPPSPKPPSPEPPSPQ 309
Query: 123 RKLMVPSPSP 94
L P PSP
Sbjct: 310 PPLPPPPPSP 319
Score = 53.1 bits (126), Expect = 9e-06
Identities = 34/87 (39%), Positives = 39/87 (44%)
Frame = -2
Query: 465 SPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPFPK 286
+PP PP+ PPP P+ P PAPP S P P PP P PPFP
Sbjct: 398 APPVPPSPPPPSPYP----PSPAPPAPPSPPPPPPPPPPPPPPP--------PPFPPFPP 445
Query: 285 TTSPPPRCCPTSGHRIPLRSASAPPPP 205
SPPP P+ G P + PPPP
Sbjct: 446 PPSPPP---PSPGPPSPAPPSPPPPPP 469
[36][TOP]
>UniRef100_B2IB70 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Beijerinckia indica subsp. indica ATCC
9039 RepID=B2IB70_BEII9
Length = 455
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/104 (29%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNELVD 347
+L+ D+ + +E V +LS EGY +T+ + +EA+K R+ P ++ +D +D
Sbjct: 5 ILIVDDETDIREIVSGILSDEGYGTRTAKNSDEALKEIEARQ--PGLIFLDIWLQGSRLD 62
Query: 348 TKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
QL++ ++ LNP + ++++ G AV+A++ GA D++ KP
Sbjct: 63 GLQLLQVIKDLNPALPIVMISGHGNIETAVSAIKLGAYDFIEKP 106
[37][TOP]
>UniRef100_A9G6P0 Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium
cellulosum 'So ce 56' RepID=A9G6P0_SORC5
Length = 481
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + + LS +GY+ T++ EE + E + D+VI D VD
Sbjct: 8 ILVVDDEANLRRVLSAQLSRDGYEVHTAEDGEEGLAFLKEHHI--DLVITDLRMPKVDGM 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L++A +P+ V++L + G AV AL+ GA DY+ KP D
Sbjct: 66 DLLRAALRDDPSRPVVLLTAHGTVDNAVEALKTGAFDYITKPFD 109
[38][TOP]
>UniRef100_A5GDQ0 Two component, sigma-54 specific, transcriptional regulator, Fis
family n=1 Tax=Geobacter uraniireducens Rf4
RepID=A5GDQ0_GEOUR
Length = 452
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ SS + + L EGY+ Q + S EE + LF + P +VI D +D
Sbjct: 5 ILVIDDDSSLRRVLEYNLQEEGYEVQAASSGEEGLYLFGQSR--PSLVITDMKMSGMDGL 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++K+++ +P V+++ + G AV A++AGA DY+ KP +
Sbjct: 63 MVLKSVKERSPETLVIIITAFGTVDVAVEAMKAGAYDYITKPFN 106
[39][TOP]
>UniRef100_Q2BI29 Two-component response regulator n=1 Tax=Neptuniibacter
caesariensis RepID=Q2BI29_9GAMM
Length = 454
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/104 (29%), Positives = 62/104 (59%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ ++ + +EA+ L G+D ++ E+A+ L +E +V D+V+ D + +D
Sbjct: 5 ILIVEDDNELREALCDTLELAGFDYIEAEDAEKALALLTEHQV--DMVVTDVNMPGMDGH 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+ ++ P + V+++ + G AV A++AGAVDY++KP D
Sbjct: 63 ELLSQIRQSYPGLPVMLITAFGQVSKAVEAIKAGAVDYLMKPFD 106
[40][TOP]
>UniRef100_C7LQA5 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Desulfomicrobium baculatum DSM 4028
RepID=C7LQA5_DESBD
Length = 445
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/104 (34%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + +V ML + GY+ T+D AV ER D+V+ D VD
Sbjct: 5 ILVVDDDRAHMTMLVAMLGSWGYEVDTADDGAMAVARVRERAY--DVVLTDVRMAEVDGI 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ ++ +++ NP + VL++ + AV AL+AGA+DY+ KPLD
Sbjct: 63 EALRRIKSYNPYLPVLIMTAYSSVDVAVQALKAGALDYLHKPLD 106
[41][TOP]
>UniRef100_A1V9T1 Response regulator receiver protein n=3 Tax=Desulfovibrio vulgaris
RepID=A1V9T1_DESVV
Length = 121
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/103 (33%), Positives = 61/103 (59%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ + E V + L+ G D T+ S EEA+ L +E V+ D+V++D +D
Sbjct: 3 ILIVDDETEFLELVGKRLARRGMDVTTASSGEEALTL-AEGRVF-DVVVLDVKMPGIDGL 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
+ ++ L+ ++PT+ VL+L AV+ ++ GA DYM+KP+
Sbjct: 61 ETLRRLRVMHPTMPVLLLTGHASLGSAVSGMELGAFDYMLKPV 103
[42][TOP]
>UniRef100_B6BCY7 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Rhodobacterales bacterium Y4I
RepID=B6BCY7_9RHOB
Length = 445
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/104 (30%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFPSAEEALKVLGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGTDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[43][TOP]
>UniRef100_UPI0000E12BCF Os07g0596300 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E12BCF
Length = 754
Score = 57.0 bits (136), Expect = 6e-07
Identities = 41/101 (40%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P SP PP PP A PPP P AR G P P PPP G P+A PP
Sbjct: 175 PPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPP-GGRPSA-------PPLPPPGG 226
Query: 321 Q*QCPGTPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P T +PPP P +G R P PPPP
Sbjct: 227 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAP------PPPP 261
[44][TOP]
>UniRef100_B9FY87 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FY87_ORYSJ
Length = 1589
Score = 57.0 bits (136), Expect = 6e-07
Identities = 41/101 (40%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P SP PP PP A PPP P AR G P P PPP G P+A PP
Sbjct: 1010 PPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPP-GGRPSA-------PPLPPPGG 1061
Query: 321 Q*QCPGTPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P T +PPP P +G R P PPPP
Sbjct: 1062 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAP------PPPP 1096
[45][TOP]
>UniRef100_Q4QBP0 Putative uncharacterized protein n=1 Tax=Leishmania major
RepID=Q4QBP0_LEIMA
Length = 762
Score = 57.0 bits (136), Expect = 6e-07
Identities = 42/123 (34%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Frame = -2
Query: 480 AASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGT 301
A++P SPP P A+ PP P A VP PPP S P P PP ++ P
Sbjct: 334 ASTPASPPPPAASAPPPPPA---ASVPPPPPAASVPPPPPAVSVPPPPRAMSIPLPPPAA 390
Query: 300 ---PPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*A-----------RRQRAARAP 163
PP P + PPP P + PL + S PPPP A R R+ AP
Sbjct: 391 SIPPPLPAVSVPPPP--PAASVPPPLPAVSVPPPPRSASALKTPPAIAGARSRSRSPTAP 448
Query: 162 CHT 154
H+
Sbjct: 449 THS 451
[46][TOP]
>UniRef100_Q84ZL0-2 Isoform 2 of Formin-like protein 5 n=1 Tax=Oryza sativa Japonica
Group RepID=Q84ZL0-2
Length = 1627
Score = 57.0 bits (136), Expect = 6e-07
Identities = 41/101 (40%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P SP PP PP A PPP P AR G P P PPP G P+A PP
Sbjct: 1048 PPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPP-GGRPSA-------PPLPPPGG 1099
Query: 321 Q*QCPGTPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P T +PPP P +G R P PPPP
Sbjct: 1100 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAP------PPPP 1134
[47][TOP]
>UniRef100_Q84ZL0 Formin-like protein 5 n=1 Tax=Oryza sativa Japonica Group
RepID=FH5_ORYSJ
Length = 1627
Score = 57.0 bits (136), Expect = 6e-07
Identities = 41/101 (40%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P SP PP PP A PPP P AR G P P PPP G P+A PP
Sbjct: 1048 PPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPP-GGRPSA-------PPLPPPGG 1099
Query: 321 Q*QCPGTPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P T +PPP P +G R P PPPP
Sbjct: 1100 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAP------PPPP 1134
[48][TOP]
>UniRef100_Q74G75 Sigma-54 dependent DNA-binding response regulator n=1 Tax=Geobacter
sulfurreducens RepID=Q74G75_GEOSL
Length = 461
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/104 (28%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ +E + +L E Y+ T+ +EA+ L ERE D+++ D + +
Sbjct: 11 ILIVDDERGQREILQTILEGERYETTTAAGGQEALALLDEREF--DVILTDLKMQGMSGM 68
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L++ L A +P ++++ + G AV A++ GA DY+ KPL+
Sbjct: 69 ELLERLLAADPQQCIIMMTAHGTVDSAVEAMKKGAFDYLEKPLE 112
[49][TOP]
>UniRef100_B3E2Z6 Response regulator receiver modulated GAF sensor protein n=1
Tax=Geobacter lovleyi SZ RepID=B3E2Z6_GEOLS
Length = 325
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ +V++L A+GY + S EEA+ LFS ++ D+V+ +
Sbjct: 7 ILVVDDSRANSSILVEILEAQGYLVSVTASAEEAIPLFSAQDF--DLVLTGLMLSGMSCF 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++K + P + V++L S + AL+ GA DY+V PLD
Sbjct: 65 NMMKVFRRHKPEIDVIILSSNDSGFNIIKALRLGAYDYIVMPLD 108
[50][TOP]
>UniRef100_Q3KG29 Two-component response regulator n=2 Tax=Pseudomonas fluorescens
RepID=Q3KG29_PSEPF
Length = 463
Score = 57.0 bits (136), Expect = 6e-07
Identities = 39/107 (36%), Positives = 60/107 (56%)
Frame = +3
Query: 165 VLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELV 344
+ VLLV D+ S +EA+ L G+D S EEA+ ERE + +V+ D + +
Sbjct: 3 IKVLLVEDDRSL-REALADTLLLAGHDYHAVGSAEEALNAV-EREAF-SLVVSDVNMPGM 59
Query: 345 DTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
D QL+ L+A P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 60 DGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFE 106
[51][TOP]
>UniRef100_Q1Q1B9 Strong similarity to sigma 54 response regulator protein n=1
Tax=Candidatus Kuenenia stuttgartiensis
RepID=Q1Q1B9_9BACT
Length = 469
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV ++ + +E+++ EGY + S E A+K S+ VY D+V+ D + V+
Sbjct: 7 ILVVEDQDAMRESLLIAFKDEGYHVECVSSGEGAIKKLSDGNVY-DLVVTDLKMKKVNGL 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+++ A++ NP V+V+ + G AV A++ GA DY+ KP
Sbjct: 66 EVLNAVKTENPATEVIVITAYGAISTAVQAIREGAYDYVTKP 107
[52][TOP]
>UniRef100_B7RQN1 Phosphate regulon transcriptional regulatory protein PhoB n=1
Tax=Roseobacter sp. GAI101 RepID=B7RQN1_9RHOB
Length = 229
Score = 57.0 bits (136), Expect = 6e-07
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LLV DE + +E + L +EGYD + +++ EEA+ L +E PD+VI+D L+
Sbjct: 8 ILLVEDE-PAQREVLAYNLESEGYDVRRAENGEEAMLLVAE--ALPDLVILDWMMPLLSG 64
Query: 351 KQLIKALQALNPT--VAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ + L+ T + V++L +R + AV L+ GA DY+VKP
Sbjct: 65 IEVCRQLKTREDTRNIPVIMLSARSEEVDAVRGLETGADDYVVKP 109
[53][TOP]
>UniRef100_B8A6X3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A6X3_ORYSI
Length = 775
Score = 56.6 bits (135), Expect = 8e-07
Identities = 36/93 (38%), Positives = 42/93 (45%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA + S PR PAAP PRP PAP S PA PP+ P
Sbjct: 329 PATNSSSSPRTPAAPAPRPPQPPPATSPAPTKPSSPPAPK------PPSPPAPSPSTTPS 382
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+PP PK +SPPP PT+ P S+PP P
Sbjct: 383 SPPAPKPSSPPPAATPTTK---PSPPPSSPPAP 412
[54][TOP]
>UniRef100_Q1C920 Helix-turn-helix, Fis-type n=8 Tax=Yersinia pestis
RepID=Q1C920_YERPA
Length = 463
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + ++ GY + + EA++L +E+ D+++ D +D
Sbjct: 17 ILVVDDDLSHCTIIQALMKGWGYQTTPAHNGLEAIEL--AKEIPFDLILTDVRMSEMDGI 74
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +KA++A NP + +L++ + AV A++AGA DY+ KPLD
Sbjct: 75 EALKAIKAYNPAIPILIMTAYSNVESAVEAIKAGAYDYLTKPLD 118
[55][TOP]
>UniRef100_B3E209 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Geobacter lovleyi SZ RepID=B3E209_GEOLS
Length = 458
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/104 (27%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ S +E + +L GYD + ++EA+ + +RE D+++ D +
Sbjct: 5 ILIVDDEKSQREILTMILQGVGYDTAEASGVQEALAMLGKREF--DLILTDLKMQGQSGL 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L++ + A +P V+++ + G AV A++ GA DY+ KPL+
Sbjct: 63 DLLEQVMADDPQQCVIMMTAHGTVDTAVGAMKRGAFDYLEKPLE 106
[56][TOP]
>UniRef100_B1JSQ0 Two component, sigma54 specific, transcriptional regulator, Fis
family n=2 Tax=Yersinia pseudotuberculosis
RepID=B1JSQ0_YERPY
Length = 454
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + ++ GY + + EA++L +E+ D+++ D +D
Sbjct: 8 ILVVDDDLSHCTIIQALMKGWGYQTTPAHNGLEAIEL--AKEIPFDLILTDVRMSEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +KA++A NP + +L++ + AV A++AGA DY+ KPLD
Sbjct: 66 EALKAIKAYNPAIPILIMTAYSNVESAVEAIKAGAYDYLTKPLD 109
[57][TOP]
>UniRef100_A7FKK5 Transcriptional regulatory protein ZraR n=1 Tax=Yersinia
pseudotuberculosis IP 31758 RepID=A7FKK5_YERP3
Length = 454
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + ++ GY + + EA++L +E+ D+++ D +D
Sbjct: 8 ILVVDDDLSHCTIIQALMKGWGYQTTPAHNGLEAIEL--AKEIPFDLILTDVRMSEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +KA++A NP + +L++ + AV A++AGA DY+ KPLD
Sbjct: 66 EALKAIKAYNPAIPILIMTAYSNVESAVEAIKAGAYDYLTKPLD 109
[58][TOP]
>UniRef100_Q93AB6 HydG n=2 Tax=Yersinia RepID=Q93AB6_YERPE
Length = 463
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + ++ GY + + EA++L +E+ D+++ D +D
Sbjct: 17 ILVVDDDLSHCTIIQALMKGWGYQTTPAHNGLEAIEL--AKEIPFDLILTDVRMSEMDGI 74
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +KA++A NP + +L++ + AV A++AGA DY+ KPLD
Sbjct: 75 EALKAIKAYNPAIPILIMTAYSNVESAVEAIKAGAYDYLTKPLD 118
[59][TOP]
>UniRef100_B5J8M1 Sigma-54 interaction domain family n=1 Tax=Octadecabacter
antarcticus 307 RepID=B5J8M1_9RHOB
Length = 444
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K + YP IV+ D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEEALK--GVGQDYPGIVVSDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L+ ++ ++ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLKGVDSSLPVIMITGHGDVPMAVEAMRIGAFDFLEKPFN 108
[60][TOP]
>UniRef100_A4EQT4 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQT4_9RHOB
Length = 450
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/104 (30%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K+ YP IVI D +D
Sbjct: 12 IAIVDDEQDMRQSISQWLALSGYDTETFASAEEALKVLGPD--YPGIVISDIKMPGMDGM 69
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 70 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 113
[61][TOP]
>UniRef100_A3ESS4 Putative two component, sigma54 specific, transcriptional
regulator, Fis family n=2 Tax=Leptospirillum sp. Group
II RepID=A3ESS4_9BACT
Length = 489
Score = 56.6 bits (135), Expect = 8e-07
Identities = 37/105 (35%), Positives = 61/105 (58%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VLLV DE S +EA LS GY QT+ EE ++ F R PDI+++D +
Sbjct: 3 VLLVEDE-ESIREAFAMGLSERGYVVQTAPDGEEGLRCF--RTSPPDILVLDMVMPGLSG 59
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++++ +++ +P + V+VL +RG AV A++ GA D++ K +D
Sbjct: 60 LEVLQEVRSEDPDIPVIVLTARGTVKDAVEAMRLGAFDFVTKNID 104
[62][TOP]
>UniRef100_C4J5K1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J5K1_MAIZE
Length = 231
Score = 56.2 bits (134), Expect = 1e-06
Identities = 39/107 (36%), Positives = 47/107 (43%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P A PP PPA+PPP P P +PPP APA P PP+ + P
Sbjct: 97 PPAPTTPPPSPPASPPPAPTTPPPSPPASPPP---APATP------PPSPPMAPP---PA 144
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAP 163
TPP P T PPP PT P S + PPP A ++ + P
Sbjct: 145 TPPPPAT--PPPPAAPT-----PAPSVAPTPPPVATPAASPKSPKTP 184
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/94 (39%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPA-APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
PA P +P PPA +PP P A P P PP G+ P AP PPA P
Sbjct: 24 PAQPPPTPNAPPANSPPQAPPAGNPPPAPQAPPAGNPPPAP--TATPPPAPTTPPP--AP 79
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
TPP TT PP P P S A PPP
Sbjct: 80 TTPPPAPTTPPPAPTTPPPAPTTPPPSPPASPPP 113
[63][TOP]
>UniRef100_B5EHS0 Response regulator receiver modulated diguanylate cyclase n=1
Tax=Geobacter bemidjiensis Bem RepID=B5EHS0_GEOBB
Length = 314
Score = 56.2 bits (134), Expect = 1e-06
Identities = 36/104 (34%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLV D+ + + V Q+LSA+G+ + S EEA++ F R V +VI D +
Sbjct: 3 LLVVDDEETLRSVVSQVLSADGFTVAEAASGEEALEAF--RSVSHPLVITDIRMGGMSGI 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+ ++ NP V+++ S A+ AL+AGA DY+VKP +
Sbjct: 61 ELLTEIKEHNPDTQVVIMTSHASLDSALTALRAGAYDYLVKPFE 104
[64][TOP]
>UniRef100_A1R0I5 Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Borrelia
turicatae 91E135 RepID=A1R0I5_BORT9
Length = 456
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/104 (29%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLVAD+ + +E + L EGY T+ +EA++ ++ D +I D + +
Sbjct: 4 LLVADDEKNIREGIATYLEEEGYFVFTASDGKEALETIKNEKI--DAIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ NP + ++L + G AV A++ GA D++ KP+D
Sbjct: 62 ELLKIVKDKNPNIPFIILTAHGTVDSAVDAMREGAYDFLTKPVD 105
[65][TOP]
>UniRef100_A0LK23 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Syntrophobacter fumaroxidans MPOB
RepID=A0LK23_SYNFM
Length = 462
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/104 (30%), Positives = 61/104 (58%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ +S +E + ML +GY +++ +EA+ F + E Y D+VI D + ++
Sbjct: 8 ILVVDDEASMREFLEIMLQKQGYQVTCAETGKEALD-FIQNETY-DLVITDIRMKPINGL 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++K + ++P+ V+++ + AVAA+Q GA DY+ KP +
Sbjct: 66 DVLKQCKVISPSTVVIIISAYASAETAVAAMQEGAYDYLPKPFN 109
[66][TOP]
>UniRef100_B6XEC8 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens
DSM 30120 RepID=B6XEC8_9ENTR
Length = 446
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + LS+EG+ T++S EA+KL + ++ D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLSSEGFKVSTAESGPEALKLLQKEKI--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q +P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFDEVQKAHPNLPVIILTAHGSIPDAVAATQRGVFSFLTKPVD 110
[67][TOP]
>UniRef100_UPI000198522B PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198522B
Length = 1426
Score = 55.8 bits (133), Expect = 1e-06
Identities = 38/96 (39%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = -2
Query: 483 PAASPCSPPRPP---AAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*Q 313
P S PP PP APPP P RG P P PPP G AP P PP
Sbjct: 884 PPRSGVPPPPPPPMRGAPPPPPPPMRGAPPPPPPPMGRAPPPP------PP--------P 929
Query: 312 CPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
G PP P +PPP PT R PPPP
Sbjct: 930 MRGAPPPPFGGAPPPPPPPTG------RGPPPPPPP 959
[68][TOP]
>UniRef100_UPI0001925155 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra
magnipapillata RepID=UPI0001925155
Length = 781
Score = 55.8 bits (133), Expect = 1e-06
Identities = 53/160 (33%), Positives = 62/160 (38%), Gaps = 4/160 (2%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PAA P + P PAAPPP A P PA P ++PAAP PPA PG
Sbjct: 173 PAAPPPAAPASPAAPPPAAPASSAAPPPAAP---ASPAAP------PPA--------APG 215
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSAS--APPP--PCHC*ARRQRAARAPCHTFPSVWT 136
+P P +PPP + P AS APPP P A A +P P
Sbjct: 216 SPAAPPPAAPPPAAPASPAAPPPAAPASPAAPPPAAPASPAAPPPAAPASPAVLPPPAAP 275
Query: 135 FSQWRKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSP 16
S + +PSP A P L S A P P
Sbjct: 276 PSPVALISPAAPSPAAPLPASPPPAALASPVAPIPPAAPP 315
[69][TOP]
>UniRef100_C1URG4 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM
14365 RepID=C1URG4_9DELT
Length = 2316
Score = 55.8 bits (133), Expect = 1e-06
Identities = 47/140 (33%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCP-VPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
P ASP P RP A P G P P PPP + P+ P P L + P
Sbjct: 36 PKASPSRPTRPAMARDPGRAHAPGSPSAPPPPPPRTVPSIP-------PQRPLASRPVPP 88
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQ 127
T P P PP P S +P+RSASAPPPP A+ Q +A+
Sbjct: 89 PTIPPPM----PPATVPQSPSPLPIRSASAPPPPSQPSAQPQPSAQ-------------- 130
Query: 126 WRKLMVPSPSPGAKSCHLAP 67
P P P A+S L+P
Sbjct: 131 ------PQPPPTARSLPLSP 144
[70][TOP]
>UniRef100_Q9SPM1 Extensin-like protein n=1 Tax=Solanum lycopersicum
RepID=Q9SPM1_SOLLC
Length = 711
Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/106 (33%), Positives = 44/106 (41%)
Frame = -2
Query: 465 SPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPFPK 286
SPP PP A PP P PV +PPP +P P A PP H +PP P
Sbjct: 443 SPPPPPVASPPPPVHSPPPPVASPPPPVHSPPPPPVASPPPPVH----------SPPPPV 492
Query: 285 TTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFP 148
+ PPP P P ++PPPP H + P H+ P
Sbjct: 493 ASPPPPVHSPPPPVHSPPPPVASPPPPVHSPPPPVHSPPPPVHSPP 538
[71][TOP]
>UniRef100_B9I9M7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I9M7_POPTR
Length = 184
Score = 55.8 bits (133), Expect = 1e-06
Identities = 37/93 (39%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHC-LNQQ*QCP 307
PA C PP PP +PPP A CP PAPPP PA P CPP +N+ CP
Sbjct: 55 PAIPECPPPPPPPSPPPP--AIPECPPPAPPPSPPPPAIP----ECPPPPAPINECPACP 108
Query: 306 GTP-PFPKTTSPPPRCCPTSGHRIPLRSASAPP 211
P PFP P P +G+ S + PP
Sbjct: 109 TPPTPFPPVLPPKQSYWPGAGY-----SFNGPP 136
[72][TOP]
>UniRef100_UPI0001AF6BE6 two component response transcriptional regulatory protein prra n=1
Tax=Mycobacterium kansasii ATCC 12478
RepID=UPI0001AF6BE6
Length = 233
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[73][TOP]
>UniRef100_Q7U7N4 Two-component response regulator, phosphate n=1 Tax=Synechococcus
sp. WH 8102 RepID=Q7U7N4_SYNPX
Length = 235
Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLF-SEREVYPDIVIVDSDNELVDT 350
LLV ++ S +E V ++L AEGYD T EA+ LF SE D++++D +
Sbjct: 10 LLVVEDDDSIRETVGEVLRAEGYDVLTCGDGAEALNLFTSEPAQQVDLLVLDLMLPGLGG 69
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
L + L+ +N +LV+ +R V L+ GA DY+VKP
Sbjct: 70 LDLCRELRRINNNTPILVISARDSETDRVLGLEVGADDYLVKP 112
[74][TOP]
>UniRef100_Q2LUG8 Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains n=1 Tax=Syntrophus
aciditrophicus SB RepID=Q2LUG8_SYNAS
Length = 456
Score = 55.8 bits (133), Expect = 1e-06
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVD 347
L +LV ++ S +E + L EG+ + + S EEAV+ + D+V++D +D
Sbjct: 4 LNILVVEDGQSQREMLRDFLLKEGHTVEEAASGEEAVQSIAGGAF--DLVLLDYKMPGMD 61
Query: 348 TKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q+++ ++ LNP V+++ + G AV A++AGAVDY+ KPL+
Sbjct: 62 GMQVLQEVKRLNPETDVVIITAYGTIETAVDAMKAGAVDYITKPLE 107
[75][TOP]
>UniRef100_Q1D6H5 Sigma-54 dependent DNA-binding response regulator n=1
Tax=Myxococcus xanthus DK 1622 RepID=Q1D6H5_MYXXD
Length = 474
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/104 (29%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ ++ + ML +G+D +++ E+ + F + DIV+ D V
Sbjct: 4 VLVIDDEANLRKVLAAMLRRDGFDVTVAENGEQGLAEFHKNGA--DIVVTDLVMPKVGGM 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+++ ++A NP V V+++ + G AV A++AGA DY+ KP D
Sbjct: 62 EVLGTIRAANPDVPVIIITAHGTVDSAVDAIKAGAFDYITKPFD 105
[76][TOP]
>UniRef100_Q167J1 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseobacter denitrificans OCh 114
RepID=Q167J1_ROSDO
Length = 444
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFGSAEDALKVLGPE--YPGIVISDIRMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGNDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[77][TOP]
>UniRef100_Q0ALL8 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ALL8_MARMM
Length = 487
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/102 (30%), Positives = 61/102 (59%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ + + + ++ +GY +T++S E A+ +E + D++++D +D
Sbjct: 5 VLIVDDDPTQRRLLQAVIEKQGYRAETAESGEAALDRVAEPGI--DVMLLDLIMPGMDGM 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+ ++AL+ P + V+VL + GG VAA++AGAVD+ VKP
Sbjct: 63 ETLEALKRKQPDLPVIVLTASGGIETVVAAMRAGAVDFFVKP 104
[78][TOP]
>UniRef100_C6E552 Response regulator receiver modulated diguanylate cyclase n=1
Tax=Geobacter sp. M21 RepID=C6E552_GEOSM
Length = 316
Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/104 (34%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLV D+ + + V Q+LSA+G+ + S EEA++ F R V +VI D +
Sbjct: 3 LLVVDDEETLRSVVSQVLSADGFTVAEAASGEEALEAF--RSVSHPLVITDIRMGGMTGI 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+ ++ NP V+++ S A+ AL+AGA DY+VKP +
Sbjct: 61 ELLAEIKEHNPDTQVVIMTSHASLDSALTALRAGAYDYLVKPFE 104
[79][TOP]
>UniRef100_B2HF74 Two-component response transcriptional regulatory protein PrrA n=1
Tax=Mycobacterium marinum M RepID=B2HF74_MYCMM
Length = 236
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 13 VLVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 70
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 71 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 112
[80][TOP]
>UniRef100_A0QBJ2 Two component response transcriptional regulatory protein prra n=2
Tax=Mycobacterium avium RepID=A0QBJ2_MYCA1
Length = 233
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[81][TOP]
>UniRef100_A0PKW8 Two component response transcriptional regulatory protein PrrA n=1
Tax=Mycobacterium ulcerans Agy99 RepID=A0PKW8_MYCUA
Length = 236
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 13 VLVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 70
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 71 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 112
[82][TOP]
>UniRef100_B8QZV2 Sigma-54 dependent DNA-binding response regulator n=1
Tax=Myxococcus fulvus HW-1 RepID=B8QZV2_MYXFU
Length = 474
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/104 (29%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ ++ + ML +G+D +++ E+ + F + DIV+ D V
Sbjct: 4 VLVIDDEANLRKVLAAMLRRDGFDVTVAENGEQGLAEFHKNGA--DIVVTDLVMPKVGGM 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+++ ++A NP V V+++ + G AV A++AGA DY+ KP D
Sbjct: 62 EVLGTIRAANPDVPVIIITAHGTVDSAVDAIKAGAFDYITKPFD 105
[83][TOP]
>UniRef100_B7RQD1 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQD1_9RHOB
Length = 444
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFPSAEEALKKLGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[84][TOP]
>UniRef100_A9HQL6 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HQL6_9RHOB
Length = 444
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFGSAEDALKVLGPE--YPGIVISDIRMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGNDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[85][TOP]
>UniRef100_UPI0001982D5B PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982D5B
Length = 1269
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/91 (40%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P +P PP+PP+APPP P G P P PP APA PP+H PG
Sbjct: 755 PPGAPPPPPKPPSAPPPPPPKPPGAPPPPPPKLPGAPAP-------PPSHV-----TVPG 802
Query: 303 TPPFP---KTTSPPPRCCPTSGHRIPLRSAS 220
PP P T +PPP PT R SAS
Sbjct: 803 PPPPPGAKGTNAPPPP--PTGRGRASSGSAS 831
Score = 53.1 bits (126), Expect = 9e-06
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P P+PP+APPP P P PAP P G+ P P P P
Sbjct: 694 PPPPPSLAPKPPSAPPPPP-----PPPPAPKPPGAPPPPPPPPPTTKPLGAHPPPPPPPP 748
Query: 303 TPPFPKT--TSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFS 130
PP PK PPP P++ P + APPPP + A AP + +V
Sbjct: 749 PPPAPKPPGAPPPPPKPPSAPPPPPPKPPGAPPPP----PPKLPGAPAPPPSHVTV---- 800
Query: 129 QWRKLMVPSPSPGAKSCHLAP 67
P P PGAK + P
Sbjct: 801 -----PGPPPPPGAKGTNAPP 816
[86][TOP]
>UniRef100_UPI0000E47360 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E47360
Length = 1032
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/90 (38%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPF 292
P PP PP PPP + G P PAPPP AP PP PG PP
Sbjct: 890 PPPPPPPPPQPPPSSGSAPGAP-PAPPPPPLLSEAPLPPPPPPPPQAALPPPPPPGPPPA 948
Query: 291 PKTT-SPPPRCCPTSGHRIPLRSASAPPPP 205
P PPP P G +P A PPPP
Sbjct: 949 PDAALPPPPPAPPPPGPPLPFDVAGPPPPP 978
[87][TOP]
>UniRef100_Q4A2Z7 Putative membrane protein n=2 Tax=Emiliania huxleyi virus 86
RepID=Q4A2Z7_EHV86
Length = 516
Score = 55.5 bits (132), Expect = 2e-06
Identities = 44/157 (28%), Positives = 57/157 (36%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P SPP PP +PPP P P+PPP P +P P
Sbjct: 80 PSPPPPSPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPPSP-----------------PPS 122
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
PP P SPPP P P + +PPPP + A+ +P P W
Sbjct: 123 PPPSPSPPSPPPPSPP------PPSISPSPPPPPPPWWQAPSASPSPPPPPPPWW----- 171
Query: 123 RKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPA 13
PS SP ++P +S P SP+
Sbjct: 172 ---QAPSASPSPPPPSISPSPPSSASPTPPPPSASPS 205
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/119 (30%), Positives = 45/119 (37%), Gaps = 26/119 (21%)
Frame = -2
Query: 483 PAASPCSPPRPPA-----------APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPA 337
P+ SP PP PP PPP PW + P+PPP +P+ P A PP
Sbjct: 140 PSISPSPPPPPPPWWQAPSASPSPPPPPPPWWQAPSASPSPPPPSISPSPPSSASPTPPP 199
Query: 336 HCLNQQ*QCPG---------------TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P + +PPP P+ LRS PPPP
Sbjct: 200 PSASPSPPPPSPPPPSPPPPPPPPPPPPPSPPSPNPPPSASPSPPFGRSLRSPPPPPPP 258
[88][TOP]
>UniRef100_Q2J3C8 OmpA/MotB n=1 Tax=Rhodopseudomonas palustris HaA2
RepID=Q2J3C8_RHOP2
Length = 651
Score = 55.5 bits (132), Expect = 2e-06
Identities = 40/107 (37%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = -2
Query: 483 PAASPCSPP----RPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ* 316
PAA P P PPAAP P R P P PPP PAAP A PP
Sbjct: 75 PAAPPAPPAGRIGEPPAAPRAEPPPRPAAPPPPPPPRAEPPAAPRAAPPPPPPAAAT--- 131
Query: 315 QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRA 175
P PP P PR P + R+ A PPPP +RQ A
Sbjct: 132 --PPRPPSPPAEKSAPRAEPPAAPRV----APPPPPPPAAAPQRQSA 172
Score = 55.1 bits (131), Expect = 2e-06
Identities = 35/100 (35%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWAR-------RGCPVPAPPPWGSAPAAP**AVWCPPAHCLN 325
PAA PP PAAPPP P R R P P PP + P P PPA
Sbjct: 90 PAAPRAEPPPRPAAPPPPPPPRAEPPAAPRAAPPPPPPAAATPPRPP-----SPPAEKSA 144
Query: 324 QQ*QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+ + P P PPP P P +APPPP
Sbjct: 145 PRAEPPAAPRVAPPPPPPPAAAPQRQSAPPPAEKAAPPPP 184
[89][TOP]
>UniRef100_Q3HTK6 Pherophorin-C1 protein n=1 Tax=Chlamydomonas reinhardtii
RepID=Q3HTK6_CHLRE
Length = 738
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/93 (37%), Positives = 39/93 (41%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PPRPP PPP P P P+PPP P +P PP+ P
Sbjct: 274 PSPPPPPPPRPPPPPPPSP------PPPSPPPPSPPPPSP-----PPPS-------PPPP 315
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P SPPP P P S PPPP
Sbjct: 316 PPPRPPPPSPPPPSPPPPPPPSPPPPPSPPPPP 348
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/93 (36%), Positives = 37/93 (39%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P SP PP PP PPPRP P P+PPP P +P PP P
Sbjct: 334 PPPSPPPPPSPPPPPPPRP------PPPSPPPPSPPPPSP------PP--------PSPP 373
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P PPP P P +PPPP
Sbjct: 374 PPPPPSPPPPPPPRPPPPSPPPPSPPPPSPPPP 406
[90][TOP]
>UniRef100_B8B832 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B832_ORYSI
Length = 1521
Score = 55.5 bits (132), Expect = 2e-06
Identities = 40/101 (39%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P P PP PP A PPP P AR G P P PPP G P+A PP
Sbjct: 954 PPPGPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPP-GGRPSA-------PPLPPPGG 1005
Query: 321 Q*QCPGTPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P T +PPP P +G R P PPPP
Sbjct: 1006 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAP------PPPP 1040
[91][TOP]
>UniRef100_A4S1Y9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S1Y9_OSTLU
Length = 1065
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/95 (35%), Positives = 42/95 (44%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PP PP +PPP P P P+PPP S P +P PP+ P
Sbjct: 499 PSPPPSPPPSPPPSPPPSPPPSPPSPPPSPPP--SPPPSP------PPSP--------PP 542
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCH 199
+PP SPPP P+ P +PPPP H
Sbjct: 543 SPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPPPH 577
[92][TOP]
>UniRef100_A2QQW4 Contig An08c0110, complete genome n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2QQW4_ASPNC
Length = 384
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/116 (37%), Positives = 48/116 (41%), Gaps = 23/116 (19%)
Frame = -2
Query: 483 PAASPCSPPRPP---AAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWC----------- 346
P+ASP +PP PP +AP P P R P P PPP SAP P
Sbjct: 196 PSASPAAPPPPPPPASAPRPPPAPSRSTPPPPPPPGASAPQPPNGTAAASIAVQAARNAL 255
Query: 345 -------PPAHCLNQQ*QCPGTPPFPKTTSPP--PRCCPTSGHRIPLRSASAPPPP 205
PPA P PP P ++PP P P S PL SA APPPP
Sbjct: 256 GHAPPPPPPAA------SAPAAPPPPPPSAPPVAPPSEPLS-RPSPLPSAIAPPPP 304
Score = 53.1 bits (126), Expect = 9e-06
Identities = 47/145 (32%), Positives = 57/145 (39%), Gaps = 6/145 (4%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGS-APAAP**AVWCPPAHCLNQQ*QCP 307
P A+ +P PP APPP P + +G P PPP + P+AP PP P
Sbjct: 151 PPATESAPDAPPRAPPPLPGSAKG---PPPPPVSTRKPSAP-----APP----------P 192
Query: 306 GTPPFPKTTSPPPRCCPTSGHR---IPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWT 136
PP +PPP P S R P RS PPPP A + P T +
Sbjct: 193 PPPPSASPAAPPPPPPPASAPRPPPAPSRSTPPPPPP-----PGASAPQPPNGTAAASIA 247
Query: 135 FSQWRKLM--VPSPSPGAKSCHLAP 67
R + P P P A S AP
Sbjct: 248 VQAARNALGHAPPPPPPAASAPAAP 272
[93][TOP]
>UniRef100_Q4ZQT1 Helix-turn-helix, Fis-type n=1 Tax=Pseudomonas syringae pv.
syringae B728a RepID=Q4ZQT1_PSEU2
Length = 471
Score = 55.5 bits (132), Expect = 2e-06
Identities = 38/105 (36%), Positives = 59/105 (56%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VLLV D+ S +EA+ + L GYD + S EEA L + +VI D + +D
Sbjct: 5 VLLVEDDRSL-REALGETLELAGYDYKAVGSAEEA--LVAAEATPFSLVISDVNMPGMDG 61
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL+ L++ +P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 62 HQLLSLLRSRHPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFE 106
[94][TOP]
>UniRef100_Q0C0N5 Sigma-54 dependent DNA-binding response regulator n=1
Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C0N5_HYPNA
Length = 461
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNEL 341
L +LV D+ +E + +L EGY +T+D+ E A++ R P +VI+D
Sbjct: 3 LDILVVDDEPDIRELMAGVLGDEGYAVRTADTAERALEEVRSRT--PRLVILDVWLQGSG 60
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
+D L+K L++++P + V+V+ G A+AA++ GA D++ KP+
Sbjct: 61 MDGLSLLKYLKSIDPILPVIVISGHGNIETAIAAIRRGAFDFIEKPI 107
[95][TOP]
>UniRef100_A9MHH5 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- RepID=A9MHH5_SALAR
Length = 445
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ + +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLASEGYSVVTAESGQEGLRILNREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[96][TOP]
>UniRef100_A7HRV6 Two component transcriptional regulator, winged helix family n=1
Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRV6_PARL1
Length = 229
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/102 (31%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + LSA GY+ Q + + A+ + ++ PD++I+D +
Sbjct: 8 VLVIDDEPPIRKLLRMGLSAHGYEIQEAPNGRTALDMLAQN---PDLIILDLGLPDIQGL 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
L++ +++ N +V ++VL SRG G V AL GA DY+ KP
Sbjct: 65 DLLRTIRSRNESVPIVVLSSRGDETGKVEALDLGADDYVTKP 106
[97][TOP]
>UniRef100_A3Q618 Two component transcriptional regulator, winged helix family n=1
Tax=Mycobacterium sp. JLS RepID=A3Q618_MYCSJ
Length = 233
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + L G+D S +++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDPDVLASLERGLRLSGFD--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[98][TOP]
>UniRef100_A1ULL8 Two component transcriptional regulator, winged helix family n=2
Tax=Mycobacterium RepID=A1ULL8_MYCSK
Length = 233
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + L G+D S +++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDPDVLASLERGLRLSGFD--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[99][TOP]
>UniRef100_A0R407 DNA-binding response regulator PrrA n=1 Tax=Mycobacterium smegmatis
str. MC2 155 RepID=A0R407_MYCS2
Length = 236
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + L G+D S +++ A L S E PD +++D + ++D
Sbjct: 13 VLVVDDDPDVLASLERGLRLSGFD--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGV 70
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 71 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 112
[100][TOP]
>UniRef100_Q9RNZ4 NtrX n=1 Tax=Zymomonas mobilis RepID=Q9RNZ4_ZYMMO
Length = 475
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNEL 341
L +LV D+ +E V +L EGY +T+ + ++ +ER P +V++D
Sbjct: 3 LEILVVDDEMDIRELVAGVLDDEGYATRTAADSDATLQALAERR--PSLVLLDVWLKGSK 60
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D +L++ ++ +PT+ VLV+ G AV A++ GAVD++ KP +
Sbjct: 61 LDGLELLEEIKRRDPTLPVLVISGHGNIDTAVTAIRQGAVDFIEKPFE 108
[101][TOP]
>UniRef100_C8WFR8 Two component, sigma54 specific, transcriptional regulator, Fis
family n=2 Tax=Zymomonas mobilis RepID=C8WFR8_ZYMMO
Length = 475
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNEL 341
L +LV D+ +E V +L EGY +T+ + ++ +ER P +V++D
Sbjct: 3 LEILVVDDEMDIRELVAGVLDDEGYATRTAADSDATLQALAERR--PSLVLLDVWLKGSK 60
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D +L++ ++ +PT+ VLV+ G AV A++ GAVD++ KP +
Sbjct: 61 LDGLELLEEIKRRDPTLPVLVISGHGNIDTAVTAIRQGAVDFIEKPFE 108
[102][TOP]
>UniRef100_C7LUI8 Response regulator receiver sensor signal transduction histidine
kinase n=1 Tax=Desulfomicrobium baculatum DSM 4028
RepID=C7LUI8_DESBD
Length = 410
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/108 (27%), Positives = 58/108 (53%)
Frame = +3
Query: 159 GTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNE 338
G V+L D+ + +E++ L GY+ + ++ +++F+ PD+++VD
Sbjct: 4 GKTSVVLTIDDDQAVRESLANFLEDFGYEVLQAGDGQQGLEVFAANR--PDLILVDLRMP 61
Query: 339 LVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
+D Q++ +Q L+P ++V+ G V AL+ GA DY+VKP+
Sbjct: 62 RMDGLQVLARVQELSPQTPIMVISGAGDIRDVVEALRRGAWDYLVKPI 109
[103][TOP]
>UniRef100_C5TGC7 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC
10988 RepID=C5TGC7_ZYMMO
Length = 475
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS--DNEL 341
L +LV D+ +E V +L EGY +T+ + ++ +ER P +V++D
Sbjct: 3 LEILVVDDEMDIRELVAGVLDDEGYATRTAADSDATLQALAERR--PSLVLLDVWLKGSK 60
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D +L++ ++ +PT+ VLV+ G AV A++ GAVD++ KP +
Sbjct: 61 LDGLELLEEIKRRDPTLPVLVISGHGNIDTAVTAIRQGAVDFIEKPFE 108
[104][TOP]
>UniRef100_B7QTR1 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Ruegeria sp. R11 RepID=B7QTR1_9RHOB
Length = 445
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKVLGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[105][TOP]
>UniRef100_A9FLE8 Two component, sigma54 specific, transcriptional regulator, Fis
family protein n=1 Tax=Phaeobacter gallaeciensis BS107
RepID=A9FLE8_9RHOB
Length = 445
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKVLGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[106][TOP]
>UniRef100_A9EM15 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Phaeobacter gallaeciensis 2.10
RepID=A9EM15_9RHOB
Length = 450
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K+ YP IVI D +D
Sbjct: 12 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKVLGPD--YPGIVISDIKMPGMDGM 69
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 70 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 113
[107][TOP]
>UniRef100_Q4A2B5 Putative membrane protein n=1 Tax=Emiliania huxleyi virus 86
RepID=Q4A2B5_EHV86
Length = 2332
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/93 (36%), Positives = 42/93 (45%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PP PP +PPP P P P PPP P AP PP+ + P
Sbjct: 853 PSPPPSPPPSPPPSPPPSP------PPPTPPPPAPPPPAP------PPSPPPSPPPPTP- 899
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P+ +PL +PPPP
Sbjct: 900 PPPAPPPPNPPP---PSPPPPLPLPPPPSPPPP 929
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/93 (36%), Positives = 42/93 (45%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PP PP +PPP P P P PPP P AP PP+ + P
Sbjct: 1031 PSPPPSPPPSPPPSPPPSP------PPPTPPPPAPPPPAP------PPSPPPSPPPPTP- 1077
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P+ +PL +PPPP
Sbjct: 1078 PPPAPPPPNPPP---PSPPPPLPLPPPPSPPPP 1107
Score = 54.3 bits (129), Expect = 4e-06
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP- 307
P+ P PP PP +PPP P P P PPP P AP PP+ + P
Sbjct: 1122 PSPPPSPPPSPPPSPPPSP------PPPTPPPPAPPPPAP------PPSPPPSPPPPTPP 1169
Query: 306 ---GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P SPPP P PL PPPP
Sbjct: 1170 PPAPPPPNPPPPSPPPPLPPPPSPPPPLPPPPLPPPP 1206
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/93 (36%), Positives = 36/93 (38%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P PP PP +PPP P P+P PPP P P V PP P
Sbjct: 1579 PLPPPSPPPSPPPSPPPSPPPSPPPPLPLPPPPSPPPPLPPPPV--PPP---------PS 1627
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P PPP P S P S PPP
Sbjct: 1628 PPPLPPPPLPPPPSPPPSPPPSPPPSPPPSPPP 1660
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/93 (36%), Positives = 41/93 (44%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA P PP PP +PPP P P P PPP P P PP+ + P
Sbjct: 758 PAPPPSPPPSPPPSPPPSP--PPSPPPPTPPPPAPPPPTP------PPSPPPSPPPPTP- 808
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P+ +PL +PPPP
Sbjct: 809 PPPAPPPPNPPP---PSPPPPLPLPPPPSPPPP 838
[108][TOP]
>UniRef100_B8G3D1 Putative uncharacterized protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G3D1_CHLAD
Length = 600
Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/105 (39%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P +P PP P PP P A PAPPP APA P PP H P
Sbjct: 493 PPHAPAPPPPPSHHAPPPPHA------PAPPPPPHAPAPP------PPPH-------APA 533
Query: 303 TPPFPKTTS-PPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAA 172
PP P + PPP P +G I LR +P PP RQRAA
Sbjct: 534 PPPPPHAPAPPPPPHAPATGQTIQLR--PSPTPPSEEDRERQRAA 576
[109][TOP]
>UniRef100_C0PJF1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PJF1_MAIZE
Length = 573
Score = 55.1 bits (131), Expect = 2e-06
Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 1/162 (0%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAA-P**AVWCPPAHCLNQQ*QCP 307
P SP SPP+PP P P R P PPP +P+ P PP+ L P
Sbjct: 194 PRRSP-SPPQPPRTYPKPPSRR---PPSQPPPSRRSPSQQPPRTYTKPPSRRL------P 243
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQ 127
PP P+ + PP+ P + H+ P R +PPPP RR + P T+P S
Sbjct: 244 SPPPPPRRSPSPPQP-PRTYHKPPSRRPPSPPPP----PRRSPSPPQPPRTYPK----SP 294
Query: 126 WRKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPATRLS 1
R+ P P P P R + SP P +R S
Sbjct: 295 SRRPPSPQPPPRRSPSPPQPPRTYPKPPSRRSPSPPPPSRRS 336
[110][TOP]
>UniRef100_A0E3T6 Chromosome undetermined scaffold_77, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E3T6_PARTE
Length = 1215
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/107 (35%), Positives = 44/107 (41%)
Frame = -2
Query: 462 PPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPFPKT 283
PP PP PPP P ++ G P P PPP S AP PP P PP KT
Sbjct: 656 PPPPPPPPPPPPPSKNGAPPPPPPPPPSRNGAP------PPP---------PPPPPPSKT 700
Query: 282 TSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSV 142
+PPP P R APPPP +Q+ + PSV
Sbjct: 701 GAPPP--------PPPPRIGGAPPPPPPLGNNQQQISNQIVQQLPSV 739
[111][TOP]
>UniRef100_C0SFQ9 Putative uncharacterized protein n=1 Tax=Paracoccidioides
brasiliensis Pb03 RepID=C0SFQ9_PARBP
Length = 675
Score = 55.1 bits (131), Expect = 2e-06
Identities = 39/98 (39%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 483 PAASPCSPPR---PPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*Q 313
P+A P PP PPA PP P + P P PPP G AP+ AV PP
Sbjct: 462 PSAIPQPPPASAPPPARQPPPPVSAPAPPPPPPPPPGPAPST---AVPPPP--------- 509
Query: 312 CPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCH 199
P PP P ++PPP P S SAPPPP H
Sbjct: 510 -PPPPPPPSGSAPPPP---------PPPSGSAPPPPPH 537
[112][TOP]
>UniRef100_Q48GE0 Sigma-54 dependent DNA-binding response regulator FleR n=1
Tax=Pseudomonas syringae pv. phaseolicola 1448A
RepID=Q48GE0_PSE14
Length = 471
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/108 (35%), Positives = 64/108 (59%)
Frame = +3
Query: 162 TVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNEL 341
++ VLLV D+ S +EA+ + L GY Q S EEA+ + +E + + +VI D +
Sbjct: 2 SINVLLVEDDRSL-REALGETLELAGYGYQAVGSAEEAL-VAAEAQPF-SLVISDVNMPG 58
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+D QL+ L++ +P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 59 MDGHQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKPFE 106
[113][TOP]
>UniRef100_Q1GGM2 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GGM2_SILST
Length = 445
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKALGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + ++ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSSLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[114][TOP]
>UniRef100_B7NRT7 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein n=1 Tax=Escherichia coli IAI39
RepID=B7NRT7_ECO7I
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[115][TOP]
>UniRef100_B7LAU9 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein n=1 Tax=Escherichia coli 55989
RepID=B7LAU9_ECO55
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[116][TOP]
>UniRef100_B5EEM5 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Geobacter bemidjiensis Bem
RepID=B5EEM5_GEOBB
Length = 455
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/104 (27%), Positives = 60/104 (57%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ ++ + +L+ GY+ QT+ EEA++ + E D+++ D + +
Sbjct: 5 ILIVDDEKGQRDILTAILTKMGYNIQTASGGEEALQQLQQEEF--DLLLTDLKMQGISGM 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L++ + A NP+ V+++ + G AV A++ GA DY+ KPL+
Sbjct: 63 ELMERVLADNPSQCVVMMTAHGTIDSAVEAMKKGAFDYLEKPLE 106
[117][TOP]
>UniRef100_C9CXF5 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Silicibacter sp. TrichCH4B
RepID=C9CXF5_9RHOB
Length = 416
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKALGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + ++ V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSSLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[118][TOP]
>UniRef100_C8UKQ6 Fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein n=1 Tax=Escherichia coli O111:H-
str. 11128 RepID=C8UKQ6_ECO11
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[119][TOP]
>UniRef100_C8TMP4 Fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein n=1 Tax=Escherichia coli O26:H11
str. 11368 RepID=C8TMP4_ECOLX
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[120][TOP]
>UniRef100_C3SI22 Response regulator HydG n=1 Tax=Escherichia coli RepID=C3SI22_ECOLX
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[121][TOP]
>UniRef100_C6EE14 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein n=5 Tax=Escherichia coli RepID=C6EE14_ECOBD
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[122][TOP]
>UniRef100_B3X5W3 Response regulator ZraR n=1 Tax=Shigella dysenteriae 1012
RepID=B3X5W3_SHIDY
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[123][TOP]
>UniRef100_B2N324 Response regulator ZraR n=1 Tax=Escherichia coli 53638
RepID=B2N324_ECOLX
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[124][TOP]
>UniRef100_A9E579 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E579_9RHOB
Length = 440
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/104 (29%), Positives = 54/104 (51%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K YP IVI D +D
Sbjct: 3 IAIVDDEQDMRQSISQWLALSGYDTETFGSAEDALKTLGPD--YPGIVISDIKMPGMDGM 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 61 QFLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 104
[125][TOP]
>UniRef100_Q8X613 Transcriptional regulatory protein zraR n=13 Tax=Escherichia coli
RepID=ZRAR_ECO57
Length = 441
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ ER D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[126][TOP]
>UniRef100_Q50136 Transcriptional regulatory protein prrA n=2 Tax=Mycobacterium
leprae RepID=PRRA_MYCLE
Length = 233
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ S +I+ A L + E PD +++D + ++D
Sbjct: 10 VLVVDDDSDVLASLERGLRLSGFE--VSTAIDGAEALRNATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[127][TOP]
>UniRef100_UPI000186E483 hypothetical protein Phum_PHUM440230 n=1 Tax=Pediculus humanus
corporis RepID=UPI000186E483
Length = 544
Score = 52.4 bits (124), Expect(2) = 2e-06
Identities = 40/104 (38%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Frame = -2
Query: 474 SPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLN-------QQ* 316
S C PP PP PPP+P C P PP P P CPPA CL QQ
Sbjct: 198 SACPPPEPP--PPPKP----KCCQP-PPMEAEYPQQP-----CPPA-CLRPLQNPPPQQM 244
Query: 315 QCPGTPPFPKTTSPPP-------RCCPTSGHRIPLRSASAPPPP 205
Q P PP P PPP CP S +R + + PPPP
Sbjct: 245 QMPPPPPPPPPPPPPPPPMEADYTVCPPSCYRSGMTTNPPPPPP 288
Score = 22.3 bits (46), Expect(2) = 2e-06
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 112 GAESESRCEELPSRPPAA 59
G ++ + C PS+PP A
Sbjct: 310 GVQTRTPCTSAPSKPPCA 327
[128][TOP]
>UniRef100_UPI0000DD95B9 Os08g0528700 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD95B9
Length = 187
Score = 54.7 bits (130), Expect = 3e-06
Identities = 53/166 (31%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPR---PW-ARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ* 316
P A+ PP PP PPPR PW P +PPP S P
Sbjct: 15 PTAASTPPP-PPGPPPPRHPSPWRTTSSTPAASPPPRRSKP------------------- 54
Query: 315 QCPGTPPFPKTTSPPP---RCCPTS-GHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFP 148
P T P T+SPPP RC P+S G P R++ PP H + +R A +P + P
Sbjct: 55 --PRTSP---TSSPPPSRTRCSPSSPGSASPARTSPRSSPPSHGSSAPRRPA-SPSASPP 108
Query: 147 SVWTFSQWRKLMVPSP-SPGAKSCHLAPRRHLFSSTAGNSPDVSPA 13
S + P+P SP + SC APR ++ S SP+
Sbjct: 109 SATASA------CPTPRSPASSSCPAAPRASTHATWPRGSSSGSPS 148
[129][TOP]
>UniRef100_Q2QWV3 Transposon protein, putative, CACTA, En/Spm sub-class n=1 Tax=Oryza
sativa Japonica Group RepID=Q2QWV3_ORYSJ
Length = 1038
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/91 (38%), Positives = 39/91 (42%)
Frame = -2
Query: 480 AASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGT 301
A SP +PP PPA PP P P P PP AP+ P PP P
Sbjct: 544 APSPPAPPSPPAPSPPAPPPPPAAPSPPAPPSPPAPSPP-----APPPP--------PAA 590
Query: 300 PPFPKTTSPPPRCCPTSGHRIPLRSASAPPP 208
P P PPP CP + +I RS APPP
Sbjct: 591 PSPPAPPPPPPPPCPPAPPKI--RSRQAPPP 619
[130][TOP]
>UniRef100_C1MZS3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZS3_9CHLO
Length = 3282
Score = 54.7 bits (130), Expect = 3e-06
Identities = 43/107 (40%), Positives = 47/107 (43%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA SPP PP+ PPPRP A P P PP PAAP PP PG
Sbjct: 1063 PAPDAPSPP-PPSPPPPRPDA----PSPPPPGLPPRPAAP-----SPPP---------PG 1103
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAP 163
PP P SPPP P + P+R + P PPC RR AP
Sbjct: 1104 QPPAPAAPSPPPPGQPLA----PIRVVT-PEPPCLQLLRRLMGECAP 1145
Score = 54.3 bits (129), Expect = 4e-06
Identities = 36/89 (40%), Positives = 38/89 (42%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPF 292
P SPPRP A PP P P+PPP G PA A PP PG PP
Sbjct: 1003 PGSPPRPDAPSPPPPGRPPAPDAPSPPPPGRPPAPD--APSPPP----------PGRPPA 1050
Query: 291 PKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P SPPP P P A +PPPP
Sbjct: 1051 PDAPSPPPPGRP------PAPDAPSPPPP 1073
Score = 53.5 bits (127), Expect = 7e-06
Identities = 38/100 (38%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVP--------APPPWGSAPAAP**AVWCPPAHCLNQQ* 316
P SPP PP PP+P A P P PPP AP AP A+ PP
Sbjct: 883 PSSPPPPPPGLPPQPEAPAASPPPPGAPPTSVEPPPEPEAPPAP-DALSPPP-------- 933
Query: 315 QCPGTPPFPKTTSPPPRCCPTSGHRIP---LRSASAPPPP 205
P PP P SPPP P R P + + APPPP
Sbjct: 934 --PRAPPEPVAASPPPSPAPPPPERPPTPVVAPSPAPPPP 971
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/95 (42%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -2
Query: 480 AASPCSPPRPPA--APPPRPWARRGCP-VPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QC 310
A SP P RPPA AP P P R P P+PPP G PA A PP
Sbjct: 1011 APSPPPPGRPPAPDAPSPPPPGRPPAPDAPSPPPPGRPPAPD--APSPPP---------- 1058
Query: 309 PGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PG PP P SPPP P P A +PPPP
Sbjct: 1059 PGRPPAPDAPSPPPPSPPP-----PRPDAPSPPPP 1088
[131][TOP]
>UniRef100_Q8MQG9 Prion-like-(Q/n-rich)-domain-bearing protein protein 75, isoform c
n=1 Tax=Caenorhabditis elegans RepID=Q8MQG9_CAEEL
Length = 539
Score = 54.7 bits (130), Expect = 3e-06
Identities = 52/158 (32%), Positives = 58/158 (36%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA SP PP P +P P A G P P PP GS P PP G
Sbjct: 254 PAGSPPPPPPPKGSP---PLAGSGSP-PPPPAAGSPP---------PPR---------TG 291
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
+PP P T SPPP P G P R+ S PPPP P + P
Sbjct: 292 SPPPPPTGSPPPP--PAGGSPPPPRAGSPPPPP-------PPRGSPPTGSLPPPQAGGSP 342
Query: 123 RKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPAT 10
SP P + AP R S G+ P SP T
Sbjct: 343 PPAGTGSPPPPPRQKRQAPER---SPPTGSPPTGSPPT 377
[132][TOP]
>UniRef100_O02123 Prion-like-(Q/n-rich)-domain-bearing protein protein 75, isoform a
n=2 Tax=Caenorhabditis elegans RepID=O02123_CAEEL
Length = 524
Score = 54.7 bits (130), Expect = 3e-06
Identities = 52/158 (32%), Positives = 58/158 (36%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA SP PP P +P P A G P P PP GS P PP G
Sbjct: 239 PAGSPPPPPPPKGSP---PLAGSGSP-PPPPAAGSPP---------PPR---------TG 276
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
+PP P T SPPP P G P R+ S PPPP P + P
Sbjct: 277 SPPPPPTGSPPPP--PAGGSPPPPRAGSPPPPP-------PPRGSPPTGSLPPPQAGGSP 327
Query: 123 RKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPAT 10
SP P + AP R S G+ P SP T
Sbjct: 328 PPAGTGSPPPPPRQKRQAPER---SPPTGSPPTGSPPT 362
[133][TOP]
>UniRef100_A8P059 Pherophorin-dz1 protein, putative n=1 Tax=Brugia malayi
RepID=A8P059_BRUMA
Length = 351
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPP-PWGSAPAA--P**AVWCPPAHCLNQQ*Q 313
P + PC P P+ PPP P + CP P PP P P P + CPP
Sbjct: 56 PPSPPCPPQPCPSLPPPTPCPPQPCPPPPPPVPCPKPPPCPPPPPPIPCPPPLPPKPCPP 115
Query: 312 CPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC 196
P PP P + PPP P P PPPP C
Sbjct: 116 PPAPPPCPPQSCPPPPLPPPCPKPPPPIPCPPPPPPKPC 154
[134][TOP]
>UniRef100_A2DM28 Diaphanous, putative n=1 Tax=Trichomonas vaginalis G3
RepID=A2DM28_TRIVA
Length = 620
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/93 (39%), Positives = 39/93 (41%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+A P PP P PP P G P P PPP AP P PPA P
Sbjct: 499 PSAPP--PPSAPGVPPAPPLPGAGVPPPPPPPGAGAPPPP-----PPPAGGAPP----PP 547
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP PK +PPP P R P A PPPP
Sbjct: 548 PPPPPKGGAPPP---PPPPARAPPPPAGTPPPP 577
[135][TOP]
>UniRef100_UPI0001B5A326 two component response transcriptional regulatory protein prra n=1
Tax=Mycobacterium avium subsp. avium ATCC 25291
RepID=UPI0001B5A326
Length = 223
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/101 (32%), Positives = 57/101 (56%)
Frame = +3
Query: 177 LVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTKQ 356
+V D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 1 MVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGVS 58
Query: 357 LIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 59 VVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 99
[136][TOP]
>UniRef100_UPI0001B45CD4 two component response transcriptional regulatory protein prra n=1
Tax=Mycobacterium intracellulare ATCC 13950
RepID=UPI0001B45CD4
Length = 223
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/101 (32%), Positives = 57/101 (56%)
Frame = +3
Query: 177 LVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTKQ 356
+V D+ S ++ + L G++ S +++ A L S E PD +++D + ++D
Sbjct: 1 MVVDDDSDVLASLERGLRLSGFE--VSTAVDGAEALRSATETRPDAIVLDINMPVLDGVS 58
Query: 357 LIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 59 VVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 99
[137][TOP]
>UniRef100_UPI000197C66E hypothetical protein PROVRETT_00812 n=1 Tax=Providencia rettgeri
DSM 1131 RepID=UPI000197C66E
Length = 446
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/104 (31%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + LS+EG+ T++S EA+K+ + ++ D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLSSEGFKVTTAESGPEALKILQKEKL--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q +P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFDEIQKAHPNMPVIILTAHGSIPDAVAATQRGVFSFLTKPVD 110
[138][TOP]
>UniRef100_UPI0001873499 sigma-54 dependent transcriptional regulator/response regulator
FleR n=1 Tax=Pseudomonas syringae pv. tomato T1
RepID=UPI0001873499
Length = 471
Score = 54.7 bits (130), Expect = 3e-06
Identities = 38/105 (36%), Positives = 62/105 (59%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VLLV D+ S +EA+ + L GY Q S EEA+ + +E + + +VI D + +D
Sbjct: 5 VLLVEDDRSL-REALGETLELAGYGYQAVGSAEEAL-VAAEAQPF-SLVISDVNMPGMDG 61
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL+ L++ +P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 62 HQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKPFE 106
[139][TOP]
>UniRef100_Q884Y0 Sigma-54 dependent transcriptional regulator/response regulator
FleR n=1 Tax=Pseudomonas syringae pv. tomato
RepID=Q884Y0_PSESM
Length = 471
Score = 54.7 bits (130), Expect = 3e-06
Identities = 38/105 (36%), Positives = 62/105 (59%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VLLV D+ S +EA+ + L GY Q S EEA+ + +E + + +VI D + +D
Sbjct: 5 VLLVEDDRSL-REALGETLELAGYGYQAVGSAEEAL-VAAEAQPF-SLVISDVNMPGMDG 61
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL+ L++ +P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 62 HQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKPFE 106
[140][TOP]
>UniRef100_Q0SM93 Response regulatory protein n=1 Tax=Borrelia afzelii PKo
RepID=Q0SM93_BORAP
Length = 452
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENI--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLEIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[141][TOP]
>UniRef100_Q0RPN0 Putative Transcriptional regulatory protein n=1 Tax=Frankia alni
ACN14a RepID=Q0RPN0_FRAAA
Length = 250
Score = 54.7 bits (130), Expect = 3e-06
Identities = 38/107 (35%), Positives = 61/107 (57%)
Frame = +3
Query: 159 GTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNE 338
GTV VL+V D+ ++ +E++ + L EGY+ T+ ++ A L + PDIV++D
Sbjct: 6 GTVRVLVVDDD-AAVRESLERSLRFEGYEVTTA--VDGADALDAVCRDQPDIVVLDVMMP 62
Query: 339 LVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+D + + L+A V VL+L +R G V+ L GA DY+VKP
Sbjct: 63 RIDGLETCRQLRARGDDVPVLMLTARDGLADRVSGLDVGADDYLVKP 109
[142][TOP]
>UniRef100_B8F917 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Desulfatibacillum alkenivorans AK-01
RepID=B8F917_DESAA
Length = 458
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/104 (27%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + ++ + GY+ +T++ AV + RE D++++D +D
Sbjct: 9 ILVVDDDEGHRKTLYTVIKSWGYNVKTAEDGSIAVDMV--REGPYDVILMDVRMAEMDGI 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K ++ NP++ VL++ + A+ A++ GA DY+ KPLD
Sbjct: 67 QALKLIKEYNPSIPVLIMTAYSSVESAIEAMKTGAYDYLTKPLD 110
[143][TOP]
>UniRef100_A8LSK9 Two component n=1 Tax=Dinoroseobacter shibae DFL 12
RepID=A8LSK9_DINSH
Length = 441
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K YP IV+ D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETYASAEEALK--GIEAGYPGIVLSDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L+K L +++ + V+++ G AV A++ GA D++ KP +
Sbjct: 65 ALLKRLMSMDSALPVIMITGHGDVPMAVEAMRLGAFDFLEKPFN 108
[144][TOP]
>UniRef100_A8AD34 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
BAA-895 RepID=A8AD34_CITK8
Length = 445
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ + +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLNREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPVD 110
[145][TOP]
>UniRef100_A4Z014 Response regulator in two-component regulatory system with KdpD,
regulation of potassium translocation (OmpR family) n=1
Tax=Bradyrhizobium sp. ORS278 RepID=A4Z014_BRASO
Length = 229
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/107 (30%), Positives = 59/107 (55%)
Frame = +3
Query: 159 GTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNE 338
G + +LV D+ ++ + L+ +GY+ + S + A+ +E P ++I+D
Sbjct: 3 GAPIKVLVIDDEPPIRKLLRMGLATQGYEILEAPSGKVALDKLAEE---PALIILDLGLP 59
Query: 339 LVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+D +L++ ++A N ++ V+VL SRG G V AL GA DY+ KP
Sbjct: 60 DIDGHELLRTIRARNESIPVVVLSSRGDEAGKVKALDLGADDYITKP 106
[146][TOP]
>UniRef100_A1TF31 Two component transcriptional regulator, winged helix family n=1
Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1TF31_MYCVP
Length = 233
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + L G+D T+ ++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDPDVLASLERGLRLSGFDVYTA--VDGAEALRSATETRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[147][TOP]
>UniRef100_A0LVA7 Two component transcriptional regulator, winged helix family n=1
Tax=Acidothermus cellulolyticus 11B RepID=A0LVA7_ACIC1
Length = 227
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/102 (34%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + +E++ + L GYD + +D + A+ + + R PD+VI+D +D
Sbjct: 3 VLVVDDDPAVRESLRRSLVFNGYDVELADDGQRALAMINMRR--PDVVILDVLMPGLDGL 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+ + L+A V VL+L +R VA L AGA DY+VKP
Sbjct: 61 ETCRRLRAAGDDVPVLMLTAREAVSDRVAGLDAGADDYLVKP 102
[148][TOP]
>UniRef100_Q1PXP1 Strongly similar to sigma 54 response regulator n=1 Tax=Candidatus
Kuenenia stuttgartiensis RepID=Q1PXP1_9BACT
Length = 455
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/102 (30%), Positives = 54/102 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+L+ D+ + ++ L EGYD + D+ E + L E DIV+ D ++
Sbjct: 5 ILIVDDEKLMRISLESQLKKEGYDVSSVDNANEGMSLIRSEEF--DIVVTDLRLPNMNGM 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+L+K ++ NP + V+++ + G AVAA + GA DY+ KP
Sbjct: 63 ELLKEIKNYNPDIIVVIMTAYGTLESAVAATKEGAYDYIAKP 104
[149][TOP]
>UniRef100_C7LV13 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Desulfomicrobium baculatum DSM 4028
RepID=C7LV13_DESBD
Length = 451
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVD 347
+ +L+ D+ S + + +L+ G+ +S E AV L ER D++++D +
Sbjct: 6 ITILIVDDDSGHRGMLRTLLADWGFVPHEIESGEAAVSLCRERAF--DLILMDVRMAGIS 63
Query: 348 TKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ +K ++A NP + +L++ + AV A++AGA DY+ KPLD
Sbjct: 64 GIEALKEIKAYNPAIPILIMTAYSNVETAVEAIKAGAYDYLTKPLD 109
[150][TOP]
>UniRef100_C3DCE1 DNA-binding response regulator n=2 Tax=Bacillus thuringiensis
RepID=C3DCE1_BACTU
Length = 233
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/112 (29%), Positives = 60/112 (53%)
Frame = +3
Query: 150 EKYGTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS 329
EK T+ +LVAD+ ++ +E V L +G+ + +EA+ ++ + + D+V++D
Sbjct: 5 EKRETMPTILVADDDANIRELVCLFLRNDGFATAEAADGKEALAVYISKNI--DLVVLDI 62
Query: 330 DNELVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++D L K L+ NP + +L+L +RG V + G DY+ KP D
Sbjct: 63 MMPIMDGWTLSKELRRANPDLPLLMLTARGETWEKVKGFELGTDDYLTKPFD 114
[151][TOP]
>UniRef100_C2B8A5 Putative uncharacterized protein n=1 Tax=Citrobacter youngae ATCC
29220 RepID=C2B8A5_9ENTR
Length = 445
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ + +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLNREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[152][TOP]
>UniRef100_C1M8G5 Putative uncharacterized protein n=1 Tax=Citrobacter sp. 30_2
RepID=C1M8G5_9ENTR
Length = 445
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ + +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLNREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[153][TOP]
>UniRef100_B9X839 Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Borrelia
spielmanii A14S RepID=B9X839_9SPIO
Length = 452
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENI--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLKIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[154][TOP]
>UniRef100_B5H5J3 Two-component system response regulator n=1 Tax=Streptomyces
pristinaespiralis ATCC 25486 RepID=B5H5J3_STRPR
Length = 237
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVY-PDIVIVDSDNELVDT 350
+L+ D+ + +EA+ + L+ EGY + + + + + EVY PD++++D +D
Sbjct: 7 ILIVDDEPAVREALQRSLAFEGYGTEVA---ADGIDALARAEVYAPDLIVLDIQMPRMDG 63
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ L+A TV +L+L +R V L AGA DY+VKP +
Sbjct: 64 LTAARRLRAAGSTVPILMLTARDTVGDRVTGLDAGADDYLVKPFE 108
[155][TOP]
>UniRef100_A8SV55 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SV55_9FIRM
Length = 239
Score = 54.7 bits (130), Expect = 3e-06
Identities = 36/110 (32%), Positives = 57/110 (51%)
Frame = +3
Query: 150 EKYGTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDS 329
+K TVL LL+ ++ + V + L GY+ T EEA++ E D++++D
Sbjct: 8 KKQVTVLRLLIVEDEKQICDMVAKGLYDAGYEVDTCYDGEEALECILSEEY--DLIVLDL 65
Query: 330 DNELVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+ VD +++K L+ N V++L +RG V L AGA DYM KP
Sbjct: 66 NLPGVDGMEILKELRQQNEETKVIILSARGQIADKVEGLDAGANDYMEKP 115
[156][TOP]
>UniRef100_A6FS51 Two component, sigma54 specific, transcriptional regulator, Fis
family protein n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FS51_9RHOB
Length = 441
Score = 54.7 bits (130), Expect = 3e-06
Identities = 30/104 (28%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD + S EEA+K+ YP IV+ D +D
Sbjct: 3 IAIIDDEKDMRQSISQWLALSGYDTEAFPSAEEALKVLGPD--YPGIVVTDIKMPGMDGM 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + ++ V+++ G AV A++ GA D++ KP +
Sbjct: 61 QFLKKLMGNDSSLPVIMITGHGDVPMAVEAMRMGAYDFLEKPFN 104
[157][TOP]
>UniRef100_A3TXA4 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXA4_9RHOB
Length = 445
Score = 54.7 bits (130), Expect = 3e-06
Identities = 30/104 (28%), Positives = 54/104 (51%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S E+A+K YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFGSAEDALKALGPD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q ++ + + + V+++ G AV A++ GA D++ KP D
Sbjct: 65 QFLRKIMGSDSALPVIMITGHGDVPMAVEAMRIGAFDFLEKPFD 108
[158][TOP]
>UniRef100_Q7XMC9 OSJNBb0018A10.6 protein n=1 Tax=Oryza sativa RepID=Q7XMC9_ORYSA
Length = 909
Score = 54.3 bits (129), Expect = 4e-06
Identities = 36/93 (38%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 483 PAASPCSP-PRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
P A P P P PPA PPP P P P PPP +P AP PP P
Sbjct: 441 PPAPPSPPAPSPPAPPPPPPVPSPSGPPPPPPPPAPSPPAP------PP----------P 484
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPP 208
P P PPP CP + + RS APPP
Sbjct: 485 PPAPSPPAPPPPPPPCPPAPPK--TRSRHAPPP 515
[159][TOP]
>UniRef100_Q1EPA3 Protein kinase family protein n=1 Tax=Musa acuminata
RepID=Q1EPA3_MUSAC
Length = 648
Score = 54.3 bits (129), Expect = 4e-06
Identities = 37/95 (38%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P ASP P PP A P P P PAPPP +P P A+ PPA
Sbjct: 47 PPASPPPPTPPPPADVPPPPVVTSPPPPAPPPPSVSPPPP--ALSPPPA----------S 94
Query: 303 TPPFPKTTSPPPRCC--PTSGHRIPLRSASAPPPP 205
TPP P + SPPP P P + S PPPP
Sbjct: 95 TPPRPPSASPPPAAAPPPPPPSATPPPTNSPPPPP 129
[160][TOP]
>UniRef100_B8A7J2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A7J2_ORYSI
Length = 783
Score = 54.3 bits (129), Expect = 4e-06
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA P + P+PP+ P +P R P PPP AP PPAH P
Sbjct: 254 PAIPPAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLAP---TMPPPAHA-------PA 303
Query: 303 TPPFPKTTS---PPPRCCPTSGHRIPLRSASAPPPPC 202
P P TT PP P+ P S+S+PPPPC
Sbjct: 304 ETPAPPTTPLALPPVTTAPS-----PKNSSSSPPPPC 335
[161][TOP]
>UniRef100_B6STT7 Extensin n=1 Tax=Zea mays RepID=B6STT7_MAIZE
Length = 257
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = -2
Query: 462 PPRPPAAPPPRPWAR---RGCPVPAPP-PWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPP 295
PP PP+ PPP+P + P P PP PW P P P HC P PP
Sbjct: 81 PPPPPSPPPPKPECKVVPYPYPYPYPPYPWSCPPPRP-------PCHCCKPPTPSPPKPP 133
Query: 294 FPKTTSPPPRCCPTSGHRIPLRSASAPPP---PCHC 196
P+ T CC + P S PPP PC C
Sbjct: 134 PPQPTPCQCHCC-----KPPTPSPPKPPPQPTPCQC 164
[162][TOP]
>UniRef100_Q9VYC9 CG34324 n=1 Tax=Drosophila melanogaster RepID=Q9VYC9_DROME
Length = 267
Score = 54.3 bits (129), Expect = 4e-06
Identities = 42/141 (29%), Positives = 46/141 (32%), Gaps = 6/141 (4%)
Frame = -2
Query: 471 PCSPPRPPAA----PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PC+PP P PPP P CP P PPP + CPP P
Sbjct: 33 PCTPPPDPCTTTTCPPPPPCTTTTCPPPEPPPCTTTT--------CPP----------PE 74
Query: 303 TPPFPKTT--SPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFS 130
PP TT PPP C T+ P PPPPC PC P T +
Sbjct: 75 PPPCTTTTCPPPPPPCITTTCPPPPPPPPPPPPPPCTRTPPPCTRTPPPCTRTPPPCTRT 134
Query: 129 QWRKLMVPSPSPGAKSCHLAP 67
P P C P
Sbjct: 135 PPPCTRTPPPCTRTPPCTTTP 155
[163][TOP]
>UniRef100_C9J4Y2 Putative uncharacterized protein ENSP00000410265 (Fragment) n=1
Tax=Homo sapiens RepID=C9J4Y2_HUMAN
Length = 253
Score = 54.3 bits (129), Expect = 4e-06
Identities = 35/92 (38%), Positives = 43/92 (46%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P +SP PP PP +PPP P P+P+PPP P+ P PP + P
Sbjct: 67 PPSSP-PPPPPPPSPPPPPPPSPPPPLPSPPPPPPLPSPP------PPPPLPSSPPPPPP 119
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPP 208
+PP P + PPP P S PL S PPP
Sbjct: 120 SPPPPPLSPPPP---PPSPPPPPLLSPPPPPP 148
Score = 53.1 bits (126), Expect = 9e-06
Identities = 35/93 (37%), Positives = 41/93 (44%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P SP PP PP++PPP P P P+PPP P P PP+ P
Sbjct: 3 PPPSPPPPPPPPSSPPPPPPPSPPPPPPSPPP----PPPP-----SPPS-------PLPP 46
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+PP P SPPP P P S+ PPPP
Sbjct: 47 SPPPPPPPSPPP---PPPSQPPPPPSSPPPPPP 76
[164][TOP]
>UniRef100_Q5ASL5 Putative uncharacterized protein n=1 Tax=Emericella nidulans
RepID=Q5ASL5_EMENI
Length = 1186
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/93 (35%), Positives = 38/93 (40%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P + PP PP PPP P + P P PPP AP P PP P
Sbjct: 487 PPPASSGPPMPPPPPPPAPGSSAPPPPPPPPPGAGAPPPP------PPPPGAGAP---PP 537
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P +G P +APP P
Sbjct: 538 PPPPPGAGAPPPPPPPGAGAPPPPPGGAAPPLP 570
Score = 53.1 bits (126), Expect = 9e-06
Identities = 35/89 (39%), Positives = 38/89 (42%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPF 292
P PPR PA+ PP P G P PPP S P P PPA P PP
Sbjct: 433 PPPPPRSPASQPPPPPPVPGASRPVPPPTASVPPPP-----PPPARPTPTVTGPPPPPPP 487
Query: 291 PKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P +S PP P P +SAPPPP
Sbjct: 488 PPASSGPPMPPPPPP---PAPGSSAPPPP 513
[165][TOP]
>UniRef100_C8VA31 Putative uncharacterized protein n=1 Tax=Aspergillus nidulans FGSC
A4 RepID=C8VA31_EMENI
Length = 657
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/93 (35%), Positives = 38/93 (40%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P + PP PP PPP P + P P PPP AP P PP P
Sbjct: 487 PPPASSGPPMPPPPPPPAPGSSAPPPPPPPPPGAGAPPPP------PPPPGAGAP---PP 537
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P +G P +APP P
Sbjct: 538 PPPPPGAGAPPPPPPPGAGAPPPPPGGAAPPLP 570
Score = 53.1 bits (126), Expect = 9e-06
Identities = 35/89 (39%), Positives = 38/89 (42%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPF 292
P PPR PA+ PP P G P PPP S P P PPA P PP
Sbjct: 433 PPPPPRSPASQPPPPPPVPGASRPVPPPTASVPPPP-----PPPARPTPTVTGPPPPPPP 487
Query: 291 PKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P +S PP P P +SAPPPP
Sbjct: 488 PPASSGPPMPPPPPP---PAPGSSAPPPP 513
[166][TOP]
>UniRef100_UPI0001A43A83 two-component system response regulator n=1 Tax=Pectobacterium
carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43A83
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG+ T++S +EA++L + RE + D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFSVMTAESGQEALRLLT-RETF-DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFSEIQRYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[167][TOP]
>UniRef100_UPI0001911B00 putative transcriptional regulator n=1 Tax=Salmonella enterica
subsp. enterica serovar Typhi str. M223
RepID=UPI0001911B00
Length = 228
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[168][TOP]
>UniRef100_UPI000190FBA3 putative transcriptional regulator n=1 Tax=Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750
RepID=UPI000190FBA3
Length = 275
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[169][TOP]
>UniRef100_UPI000190E89A putative transcriptional regulator n=1 Tax=Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068
RepID=UPI000190E89A
Length = 202
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[170][TOP]
>UniRef100_UPI000190ACDA sigma-54 dependent transcriptional regulator/response regulator n=1
Tax=Salmonella enterica subsp. enterica serovar Typhi
str. 404ty RepID=UPI000190ACDA
Length = 151
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[171][TOP]
>UniRef100_Q3YUY0 Response regulator of hydrogenase 3 activity (Sensor HydH) n=1
Tax=Shigella sonnei Ss046 RepID=Q3YUY0_SHISS
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[172][TOP]
>UniRef100_Q3SF90 Two Component Transcriptional Regulator, Fis family n=1
Tax=Thiobacillus denitrificans ATCC 25259
RepID=Q3SF90_THIDA
Length = 449
Score = 54.3 bits (129), Expect = 4e-06
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +3
Query: 168 LVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVD 347
L +LV D+ ++ +E + L A G+ DS E A+ + PD V+ D +D
Sbjct: 4 LTILVVDDDAALRELITLRLEANGFRVVAVDSGEAALAQLALAR--PDAVLTDLQMAGMD 61
Query: 348 TKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +A+QA +P + V+VL + G AVAA Q G Y+ KP D
Sbjct: 62 GMALFRAIQARDPALPVVVLTAHGTIPDAVAATQQGLFGYLTKPYD 107
[173][TOP]
>UniRef100_Q31TZ3 Response regulator of hydrogenase 3 activity n=1 Tax=Shigella
boydii Sb227 RepID=Q31TZ3_SHIBS
Length = 408
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[174][TOP]
>UniRef100_Q0SXZ6 Transcriptional Regulatory protein n=1 Tax=Shigella flexneri 5 str.
8401 RepID=Q0SXZ6_SHIF8
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[175][TOP]
>UniRef100_C6DBK9 Putative two component, sigma54 specific, transcriptional
regulator, Fis family n=1 Tax=Pectobacterium carotovorum
subsp. carotovorum PC1 RepID=C6DBK9_PECCP
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG+ T++S +EA++L + RE + D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFSVMTAESGQEALRLLT-RETF-DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFSEIQRYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[176][TOP]
>UniRef100_C6BUB1 Response regulator receiver protein n=1 Tax=Desulfovibrio
salexigens DSM 2638 RepID=C6BUB1_DESAD
Length = 299
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/107 (26%), Positives = 58/107 (54%)
Frame = +3
Query: 165 VLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELV 344
++ +L+ D+ +E ++L+ +G++ + S EEA+ + S PD++I+D +
Sbjct: 3 IIKVLMVDDEERFRETTAKILTRKGFETMLAASGEEALDMLSHS---PDVIILDVRMGGM 59
Query: 345 DTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ ++ ++ +P + +++L G GA A AGA DY+ KP D
Sbjct: 60 SGHETLERIREKDPDIPIIMLTGHGDISGAKKAYSAGAYDYLAKPCD 106
[177][TOP]
>UniRef100_C0PYI7 Putative transcriptional regulator n=1 Tax=Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594
RepID=C0PYI7_SALPC
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[178][TOP]
>UniRef100_B7UPF9 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma 54
interaction protein n=1 Tax=Escherichia coli O127:H6
str. E2348/69 RepID=B7UPF9_ECO27
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[179][TOP]
>UniRef100_B7NFU5 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein n=1 Tax=Escherichia coli UMN026
RepID=B7NFU5_ECOLU
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[180][TOP]
>UniRef100_B7LUJ8 Fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein n=1 Tax=Escherichia fergusonii ATCC
35469 RepID=B7LUJ8_ESCF3
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[181][TOP]
>UniRef100_B6I5L6 Two-component regulator n=1 Tax=Escherichia coli SE11
RepID=B6I5L6_ECOSE
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[182][TOP]
>UniRef100_B5F1E2 Sigma-54 dependent transcriptional regulator/response regulator n=1
Tax=Salmonella enterica subsp. enterica serovar Agona
str. SL483 RepID=B5F1E2_SALA4
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[183][TOP]
>UniRef100_B1LNV7 Response regulator ZraR n=1 Tax=Escherichia coli SMS-3-5
RepID=B1LNV7_ECOSM
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[184][TOP]
>UniRef100_A8A7A4 Response regulator ZraR n=1 Tax=Escherichia coli HS
RepID=A8A7A4_ECOHS
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[185][TOP]
>UniRef100_A7ZUM1 Response regulator ZraR n=1 Tax=Escherichia coli E24377A
RepID=A7ZUM1_ECO24
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[186][TOP]
>UniRef100_A1T6F1 Sensor protein n=1 Tax=Mycobacterium vanbaalenii PYR-1
RepID=A1T6F1_MYCVP
Length = 1385
Score = 54.3 bits (129), Expect = 4e-06
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYD-DQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LVAD+ + +E + ++L ++GY D +D +E L + R PDIV+ D +D
Sbjct: 629 VLVADDNADMREYLTRLLRSDGYRVDAVADGLEA---LEAIRAGAPDIVVSDVMMPRLDG 685
Query: 351 KQLIKALQALNPTVA--VLVLGSRGGPMGAVAALQAGAVDYMVKP 479
L+ L+A T A VL+L +R G +++ L+AGA DY+VKP
Sbjct: 686 LGLVAELRADRRTAATPVLLLSARAGQQESISGLRAGADDYLVKP 730
[187][TOP]
>UniRef100_Q1NPJ0 Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1
RepID=Q1NPJ0_9DELT
Length = 461
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + A+ +LS EGY+ +T+ + A+ L + D+VI D EL D
Sbjct: 4 ILVVDDEEDIRTALRIVLSGEGYEVETAANGRVAIDLLEKHSF--DMVITDLKMELADGY 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++K ++ + V+++ + G AV A++ GA DY+VKP
Sbjct: 62 DVLKKVREFDSLTPVIIITAFGSIDSAVEAMKLGATDYIVKP 103
[188][TOP]
>UniRef100_Q0YT74 Response regulator receiver:Sigma-54 factor, interaction
region:Helix-turn-helix, Fis-type n=1 Tax=Chlorobium
ferrooxidans DSM 13031 RepID=Q0YT74_9CHLB
Length = 451
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVK---LFSEREVYPDIVIVDSDNELV 344
+LV D+ +S + + L EGY+ +T+ S EE + LF PD+VI D +
Sbjct: 5 ILVIDDDTSLRRVLEYNLQEEGYEVETAASGEEGLMRLDLFG-----PDLVITDMKMTGM 59
Query: 345 DTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
D +++K+++ +P V+++ + G AV A++AGA DY+ KP +
Sbjct: 60 DGMKVLKSVRERSPETLVIIITAFGSVDAAVEAMKAGAYDYITKPFN 106
[189][TOP]
>UniRef100_C6WMN8 Two component transcriptional regulator, winged helix family n=1
Tax=Actinosynnema mirum DSM 43827 RepID=C6WMN8_ACTMD
Length = 229
Score = 54.3 bits (129), Expect = 4e-06
Identities = 37/102 (36%), Positives = 54/102 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + EAV + L EGY+ T+ +A+ L R + PD VI+D ++
Sbjct: 3 ILVVDDEVAVAEAVTRTLRFEGYEVTTAHDGAQALDLV--RSLRPDGVILDVTMPVLGGL 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+AL+A T VL+L +R VA L AGA DY+ KP
Sbjct: 61 DACRALRASGDTTPVLMLTARAEVSDRVAGLDAGADDYLAKP 102
[190][TOP]
>UniRef100_C6NIQ1 Putative two component, sigma54 specific, transcriptional
regulator, Fis family n=1 Tax=Pectobacterium wasabiae
WPP163 RepID=C6NIQ1_9ENTR
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG+ T++S +EA++L + RE + D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFSVMTAESGQEALRLLT-RETF-DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFSEIQRYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[191][TOP]
>UniRef100_C6MLA7 Response regulator receiver modulated diguanylate cyclase n=1
Tax=Geobacter sp. M18 RepID=C6MLA7_9DELT
Length = 319
Score = 54.3 bits (129), Expect = 4e-06
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLV D+ + + V Q+LSA+G+ + S EEA++ F R +VI D +
Sbjct: 3 LLVVDDEETLRSVVSQVLSADGFTVSEAASGEEALEAF--RASSHQLVITDIRMGGMSGI 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+ ++ NP V+++ S A+ AL+AGA DY+VKP +
Sbjct: 61 ELLTRIKEHNPDTQVVIMTSHASLDSALTALRAGAYDYLVKPFE 104
[192][TOP]
>UniRef100_C1SKR5 Response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains n=1 Tax=Denitrovibrio acetiphilus
DSM 12809 RepID=C1SKR5_9BACT
Length = 442
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/105 (31%), Positives = 58/105 (55%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LL+ D LS V L++E D+ T+ + E +KL SE+E D++I D +
Sbjct: 3 ILLIEDNLSLST-LVSMYLTSENIDNDTAPNGYEGLKLLSEKEY--DVLITDIRMPGMSG 59
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++++ L P + V+++ + G AVAA++ GA DY+ KP +
Sbjct: 60 NEVMEKAAKLYPDMPVIIITAHGNIPDAVAAIRKGAYDYLTKPFE 104
[193][TOP]
>UniRef100_B4TRZ6 Transcriptional regulatory protein ZraR n=5 Tax=Salmonella enterica
subsp. enterica RepID=B4TRZ6_SALSV
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[194][TOP]
>UniRef100_B4T1D9 Transcriptional regulatory protein ZraR n=20 Tax=Salmonella
enterica RepID=B4T1D9_SALNS
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S +E +++ +V D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKV--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPID 110
[195][TOP]
>UniRef100_B3IGJ7 Response regulator ZraR n=1 Tax=Escherichia coli E110019
RepID=B3IGJ7_ECOLX
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[196][TOP]
>UniRef100_C8TZT6 Fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein n=4 Tax=Escherichia coli
RepID=C8TZT6_ECOLX
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[197][TOP]
>UniRef100_B2TWJ1 Response regulator ZraR n=2 Tax=Enterobacteriaceae
RepID=B2TWJ1_SHIB3
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[198][TOP]
>UniRef100_B2Q0Z5 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC
25827 RepID=B2Q0Z5_PROST
Length = 446
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/104 (31%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + LS+EG+ T++S EA+KL + ++ ++VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLSSEGFKVTTAESGPEALKLLQKEKI--ELVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q +P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFDEIQKQHPNLPVIILTAHGSIPDAVAATQRGVFSFLTKPVD 110
[199][TOP]
>UniRef100_A6BZU5 Transcriptional regulatory protein zraR n=1 Tax=Planctomyces maris
DSM 8797 RepID=A6BZU5_9PLAN
Length = 459
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/118 (27%), Positives = 66/118 (55%)
Frame = +3
Query: 129 VKKSTHWEKYGTVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYP 308
+KK T+ VL+V DE + ++ + L++EGY+ + ++ A++L +R+
Sbjct: 1 MKKRTNSNVQLNRSVLIVEDE-EVIRTSLAEFLTSEGYETMQASTVARALELARDRDF-- 57
Query: 309 DIVIVDSDNELVDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
++ I D D +L++ LQ + P++ VL++ + ++A +AGA DY+VKP+
Sbjct: 58 NVAICDVQLPDGDGIELLRRLQNIKPSIFVLIITAYATVENTISAFKAGAFDYLVKPV 115
[200][TOP]
>UniRef100_A3XF67 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseobacter sp. MED193 RepID=A3XF67_9RHOB
Length = 445
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD +T S EEA+K YP IVI D +D
Sbjct: 7 IAIVDDEQDMRQSISQWLALSGYDTETFASAEEALKELGAD--YPGIVISDIKMPGMDGM 64
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + + V+++ G AV A++ GA D++ KP +
Sbjct: 65 QFLKKLMGSDSGLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFN 108
[201][TOP]
>UniRef100_A3VK09 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Rhodobacterales bacterium HTCC2654
RepID=A3VK09_9RHOB
Length = 439
Score = 54.3 bits (129), Expect = 4e-06
Identities = 30/104 (28%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ G+D +T S EEA+K + YP +VI D +D
Sbjct: 3 IAIVDDEQDMRQSISQWLALSGFDTETFPSAEEALK--NVGTDYPGVVISDIRMPGMDGM 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L +++ + V+++ G AV A++ GA D++ KP +
Sbjct: 61 QFLKKLMSVDSALPVIMITGHGDVPMAVEAMRVGAYDFLEKPFN 104
[202][TOP]
>UniRef100_A1HNJ0 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Thermosinus carboxydivorans Nor1
RepID=A1HNJ0_9FIRM
Length = 476
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/103 (31%), Positives = 62/103 (60%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VL+V DELS + + ++ GY+ +++ +EA++ +E+ P ++I+D ++D
Sbjct: 21 VLIVDDELSV-RRLLFEVARRAGYEAFLAENGQEAIE--QTKEIKPAVIIMDIKMPVMDG 77
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
+ + ++A P VAV+++ + G AV A++ GA DY+VKP
Sbjct: 78 LEAFERIRADYPDVAVILMTAHGTVDTAVEAMKRGAFDYLVKP 120
[203][TOP]
>UniRef100_P14375 Transcriptional regulatory protein zraR n=5 Tax=Escherichia
RepID=ZRAR_ECOLI
Length = 441
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S + +L GY+ ++S +A++ RE D+V+ D +D
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+K ++ALNP + VL++ + AV AL+ GA+DY++KPLD
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLD 109
[204][TOP]
>UniRef100_UPI0000F2EB19 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2EB19
Length = 349
Score = 53.9 bits (128), Expect = 5e-06
Identities = 45/111 (40%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -2
Query: 483 PAASPCSPPRPPAAP--PPRPWAR-RGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*Q 313
PAA+P +PPRP AAP PPRP A R P PA P AP P A+ PP
Sbjct: 228 PAAAPRAPPRPAAAPRAPPRPAAAPRALPRPAAAP--GAPPRPAAALRAPPRRA-----A 280
Query: 312 CPGTPPFPKTT-SPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAP 163
P PP P PPR P G PPP A RAA+AP
Sbjct: 281 APTAPPRPAAAPRGPPREAPFQG-----------PPPFKKVAASPRAAKAP 320
[205][TOP]
>UniRef100_Q2F895 Virion core protein n=1 Tax=Orf virus RepID=Q2F895_ORFV
Length = 334
Score = 53.9 bits (128), Expect = 5e-06
Identities = 49/145 (33%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Frame = -2
Query: 483 PAASPCSPPRP------PAAPPPR---PWARRGCPVPAPPPWGSAPAAP**AVWCP-PAH 334
PAA+P PP P PA P P P CP PAP P APAA CP PA
Sbjct: 121 PAAAPACPPAPACPAPAPACPAPAATCPAPAAPCPAPAPAPACPAPAAT-----CPAPA- 174
Query: 333 CLNQQ*QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHT 154
P PP T PPP CP A A PP + RQ P T
Sbjct: 175 ------PAPACPPATAPTCPPPAACP----------APACPP-----STRQCPPAPPLPT 213
Query: 153 FPSVWTFSQWRKLMVPSPSPGAKSC 79
P+ + + +P P A SC
Sbjct: 214 KPAPAAKPIFLQQSLPPPQYPASSC 238
[206][TOP]
>UniRef100_Q5VR02 Hydroxyproline-rich glycoprotein-like n=1 Tax=Oryza sativa Japonica
Group RepID=Q5VR02_ORYSJ
Length = 1026
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/95 (41%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = -2
Query: 480 AASPCSPPRPPA----APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*Q 313
A SP +PP PPA APPP P A P P PPP +P AP + PPA
Sbjct: 517 APSPPAPPSPPAPSPPAPPPPPPA-LSPPAPPPPPPAPSPPAP---LPPPPA-------- 564
Query: 312 CPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPP 208
+PP P PPP CP + + RS APPP
Sbjct: 565 --PSPPAPPPPPPPPPPCPPAPPK--TRSRQAPPP 595
[207][TOP]
>UniRef100_Q3HTK5 Pherophorin-C2 protein n=1 Tax=Chlamydomonas reinhardtii
RepID=Q3HTK5_CHLRE
Length = 853
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/93 (35%), Positives = 39/93 (41%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PP PP PPP P P P+PPP P +P PP + P
Sbjct: 336 PSPPPPPPPSPPPPPPPSP-PPPSPPPPSPPPPSPPPPSP------PPPPPPSPPPPPPP 388
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+PP P SPPP P P +PPPP
Sbjct: 389 SPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPP 421
[208][TOP]
>UniRef100_Q1EP18 Protein kinase family protein n=1 Tax=Musa balbisiana
RepID=Q1EP18_MUSBA
Length = 637
Score = 53.9 bits (128), Expect = 5e-06
Identities = 48/152 (31%), Positives = 57/152 (37%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P AS PP P A PPP P P+PPP S P P PP + P
Sbjct: 26 PPASNSPPPAPNAPPPPTP--------PSPPPASSPPPTPPPPADVPPPPVVTS--PPPP 75
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQW 124
PP P + PPP P P SA PPP A P ++ P S
Sbjct: 76 DPPPPSVSPPPPALSPPPA-STPPPPPSASPPPAAAPPPPPFATPPPTNSPPP--PPSAT 132
Query: 123 RKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSP 28
+ P PG++S P R +ST G P
Sbjct: 133 PPPTISPPPPGSQS---PPARAPSNSTGGTPP 161
[209][TOP]
>UniRef100_C5XS10 Putative uncharacterized protein Sb04g033190 n=1 Tax=Sorghum
bicolor RepID=C5XS10_SORBI
Length = 160
Score = 53.9 bits (128), Expect = 5e-06
Identities = 37/94 (39%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -2
Query: 483 PAASPCSPPRPPA-APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
PA P +P PP+ +PP P A P P PP G+ P AP PPA P
Sbjct: 24 PAQPPPTPNAPPSNSPPQAPPAGNPPPAPQAPPAGNPPPAP--TATPPPAPTSTPPPAPP 81
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
TPP P T+PPP PT+ P S+PP P
Sbjct: 82 TTPP-PAPTTPPP-APPTTPPPAPTTPPSSPPSP 113
[210][TOP]
>UniRef100_C5XD76 Putative uncharacterized protein Sb02g038276 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XD76_SORBI
Length = 869
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/104 (37%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Frame = -2
Query: 483 PAASPCSPPRPPAA------PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQ 322
P AS PP PP A PPP P +R G P P PPP G+ P AP PP
Sbjct: 716 PGASAPPPPPPPGARPGAPPPPPPPGSRPGAPPPPPPP-GARPGAP------PPPPPPGG 768
Query: 321 Q*QCPGTPPFP-----KTTSPPPRCCPTSGHRIPLRSASAPPPP 205
+ P PP P PPP G P R+ PPPP
Sbjct: 769 GGRGPPPPPAPGGRLGGHPPPPPPGGRAPGAPAPPRAPGVPPPP 812
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/95 (38%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = -2
Query: 477 ASPCSPPRPPAA----PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QC 310
+ P PP PP A PPP P AR G P P PPP GS P AP
Sbjct: 707 SGPPPPPPPPGASAPPPPPPPGARPGAPPPPPPP-GSRPGAP-----------------P 748
Query: 309 PGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P PP + +PPP P G R P PPPP
Sbjct: 749 PPPPPGARPGAPPPPPPPGGGGRGP------PPPP 777
[211][TOP]
>UniRef100_C0PPC0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PPC0_MAIZE
Length = 199
Score = 53.9 bits (128), Expect = 5e-06
Identities = 49/158 (31%), Positives = 61/158 (38%), Gaps = 1/158 (0%)
Frame = -2
Query: 483 PAASPCSPPRPPA-APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
PA P +P PPA +PP P A P P PP G+ P AP PPA P
Sbjct: 24 PAQPPPTPNAPPANSPPQAPPAGNPPPAPQAPPAGNPPPAP--TATPPPAPTTPPP--AP 79
Query: 306 GTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARAPCHTFPSVWTFSQ 127
TPP TT PP P P S A PPP A P P+ T
Sbjct: 80 TTPPPAPTTPPPAPTTPPPAPTTPPPSPPASPPP----APTTPPPSPPASPPPAPATPPP 135
Query: 126 WRKLMVPSPSPGAKSCHLAPRRHLFSSTAGNSPDVSPA 13
+ P+ SP +P+ ++ +P +SPA
Sbjct: 136 SPPMATPAASP------KSPKTPSPAAATSPAPSLSPA 167
[212][TOP]
>UniRef100_C0NQ83 Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus
G186AR RepID=C0NQ83_AJECG
Length = 642
Score = 53.9 bits (128), Expect = 5e-06
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P++SP PP PP P P P + P P PPP P P P + N P
Sbjct: 454 PSSSPTPPPPPPPPPAPAPASTGPVPPPPPPPTTGLPRPP------PRSAPSN---SVPP 504
Query: 303 TPPFPKTTSPPPRCCPTSGHRIP----------LRSASAPPPPCHC*ARRQRAARAP 163
PP P +PPP P++G P SA PPPP AR ++P
Sbjct: 505 PPPPPSGGAPPPPPPPSAGAPPPPPPPPPPGSAANSAGPPPPPPASSARPSSLPKSP 561
[213][TOP]
>UniRef100_A1DL75 Actin associated protein Wsp1, putative n=1 Tax=Neosartorya
fischeri NRRL 181 RepID=A1DL75_NEOFI
Length = 638
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/95 (36%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = -2
Query: 486 DPAASPCSPPRPPAA-PPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QC 310
+P P PP P A+ P P P A P P PPP S P P PP +
Sbjct: 445 NPVPPPAPPPVPAASRPTPPPPATSAVPPPPPPPSASVPPPP------PPPPPASAGPPA 498
Query: 309 PGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P PP P PPP P P SAPPPP
Sbjct: 499 PPPPPPPSIAGPPPPPPPP-----PAPGGSAPPPP 528
[214][TOP]
>UniRef100_UPI0001A43BD5 two-component system response regulator n=1 Tax=Pectobacterium
carotovorum subsp. brasiliensis PBR1692
RepID=UPI0001A43BD5
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/104 (32%), Positives = 59/104 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG+ T++S +EA++L + RE + D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFSVMTAESGQEALRLLT-RETF-DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFAEIQRYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[215][TOP]
>UniRef100_UPI0001844A01 hypothetical protein PROVRUST_02206 n=1 Tax=Providencia rustigianii
DSM 4541 RepID=UPI0001844A01
Length = 446
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + LS+EG+ T++S EA+K + ++ D+VI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLSSEGFKVSTAESGPEALKRLQKEKI--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q +P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFDEVQKAHPNLPVIILTAHGSIPDAVAATQRGVFSFLTKPVD 110
[216][TOP]
>UniRef100_UPI0001827294 hypothetical protein ENTCAN_03430 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI0001827294
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L +EGY T++S +E +K+ S ++ D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLVSEGYTVVTAESGQEGLKVLSREKI--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFAEIQKQQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[217][TOP]
>UniRef100_UPI00017F3565 two component, sigma54 specific, Fis family transcriptional
regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024
RepID=UPI00017F3565
Length = 252
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L +EGY T++S +E +K+ S ++ D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLVSEGYSVVTAESGQEGLKVLSREKI--DLVISDLRMDEMDGL 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFTEIQKQQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[218][TOP]
>UniRef100_UPI00016B37FE acetoacetate metabolism regulatory protein AtoC
(Ornithine/argininedecarboxylase inhibitor) n=1
Tax=Borrelia valaisiana VS116 RepID=UPI00016B37FE
Length = 452
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENL--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLEIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[219][TOP]
>UniRef100_UPI000169B0DE two-component transcriptional regulator n=1 Tax=Yersinia pestis
FV-1 RepID=UPI000169B0DE
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG++ T++S EA++L ++ DIVI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFNVTTAESGHEALRLLMREKI--DIVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFAEIQKYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[220][TOP]
>UniRef100_Q73L96 Sigma-54 dependent transcriptional regulator/response regulator n=1
Tax=Treponema denticola RepID=Q73L96_TREDE
Length = 473
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ + +E + L EGY+ T+D+ + + + + EV D+VI D + +
Sbjct: 5 ILVIDDEKNIREGLAMALEDEGYEVITADNGKTGLDIALKDEV--DLVITDLKMPEISGE 62
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++++ + + P V V+VL G AV A++ GA D++ KPLD
Sbjct: 63 EVLREVISKTPGVPVIVLTGHGTVETAVEAMRMGAYDFLTKPLD 106
[221][TOP]
>UniRef100_Q660B2 Response regulatory protein n=1 Tax=Borrelia garinii
RepID=Q660B2_BORGA
Length = 452
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENL--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLKIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[222][TOP]
>UniRef100_Q39SU6 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Geobacter metallireducens GS-15
RepID=Q39SU6_GEOMG
Length = 461
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/108 (32%), Positives = 60/108 (55%)
Frame = +3
Query: 162 TVLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNEL 341
TV VL+V D++S + + L EGY+ T+ S EE ++LF + P +V+ D
Sbjct: 8 TVRVLIVDDDVSL-RRVLEYNLQEEGYEVLTAGSGEEGLRLFEDGA--PTLVVTDLKMPG 64
Query: 342 VDTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ QL++ ++ P V+V+ + G AV A++AGA D++ KP +
Sbjct: 65 MGGFQLLREVKERFPDTVVIVITAFGAVEAAVEAMKAGAYDFITKPFN 112
[223][TOP]
>UniRef100_Q1D4Q2 Sigma-54 dependent DNA-binding response regulator n=1
Tax=Myxococcus xanthus DK 1622 RepID=Q1D4Q2_MYXXD
Length = 450
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/103 (32%), Positives = 59/103 (57%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + + + L EG+ T+ EEA +L + + V D+++ D +D
Sbjct: 4 ILVADDEEGVRSFLAEALEYEGHSVTTAADGEEAARLMARQGV--DLLLTDLRMPGMDGL 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
L++ ++ P V V+VL + G AVAA++AGA D+++KP+
Sbjct: 62 TLLRKVREEQPDVEVVVLTAVGTVESAVAAMKAGAFDFLLKPV 104
[224][TOP]
>UniRef100_C3K0U7 Two-component response regulator n=1 Tax=Pseudomonas fluorescens
SBW25 RepID=C3K0U7_PSEFS
Length = 458
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/107 (31%), Positives = 59/107 (55%)
Frame = +3
Query: 165 VLVLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELV 344
+ VLLV D+ + +EA+ L G+D + S E+A++ + +V+ D + +
Sbjct: 3 IKVLLVEDDRAL-REALADTLLLAGHDYRAVGSAEDALEAVEQESF--SLVVSDVNMPGM 59
Query: 345 DTKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
D QL+ L+A P + VL++ + G AV A++ GA DY+VKP +
Sbjct: 60 DGHQLLSLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFE 106
[225][TOP]
>UniRef100_B7MYI3 Putative DNA-binding response regulator in two-component system n=1
Tax=Escherichia coli ED1a RepID=B7MYI3_ECO81
Length = 444
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EGY T++S E +++ + +V D+VI D + +D
Sbjct: 8 LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKV--DLVISDLRMDEMDGM 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q + P + V++L + G AVAA Q G +++KP+D
Sbjct: 66 QLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLIKPVD 109
[226][TOP]
>UniRef100_B5RQ99 Response regulatory protein n=1 Tax=Borrelia recurrentis A1
RepID=B5RQ99_BORRA
Length = 451
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LLVAD+ + +E + L EGY T+ EEA++ ++ D +I D + +
Sbjct: 4 LLVADDEKNIREGIATYLEEEGYFVFTASDGEEALETIQNEKI--DAIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KP+D
Sbjct: 62 ELLKIVKDRNLNIPFIILTAHGTVDSAVDAMREGAYDFLTKPVD 105
[227][TOP]
>UniRef100_A7MGY2 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MGY2_ENTS8
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L++EG+ +T++S E +++ + ++ D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGLRLTSEGFTVETAESGHEGLRILAREKI--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q L P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFAEIQKLQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[228][TOP]
>UniRef100_A4WDC3 Two component, sigma54 specific, transcriptional regulator, Fis
family n=1 Tax=Enterobacter sp. 638 RepID=A4WDC3_ENT38
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + L +EGY T++S +E +K ++ D+VI D + +D
Sbjct: 9 LLLVDDDPGLLKLLGMRLVSEGYSVVTAESGQEGLKALGREKI--DLVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
QL +Q L P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 QLFVEIQKLQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[229][TOP]
>UniRef100_A4T774 Two component transcriptional regulator, winged helix family n=1
Tax=Mycobacterium gilvum PYR-GCK RepID=A4T774_MYCGI
Length = 231
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ ++ + L G+D T+ ++ A L S E PD +++D + ++D
Sbjct: 8 VLVVDDDPDVLASLERGLRLSGFDVFTA--VDGAEALRSATETRPDAIVLDINMPVLDGV 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 66 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 107
[230][TOP]
>UniRef100_A4TMX1 Two-component system response regulator n=21 Tax=Yersinia
RepID=A4TMX1_YERPP
Length = 445
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/104 (31%), Positives = 57/104 (54%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ S + + L++EG++ T++S EA++L ++ DIVI D + +D
Sbjct: 9 LLLVDDDPSLLKLLGMRLTSEGFNVTTAESGHEALRLLMREKI--DIVISDLRMDEMDGM 66
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
L +Q P + V++L + G AVAA Q G ++ KP+D
Sbjct: 67 ALFAEIQKYQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVD 110
[231][TOP]
>UniRef100_B8QZS3 Nla24 n=1 Tax=Myxococcus fulvus HW-1 RepID=B8QZS3_MYXFU
Length = 451
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
LL+ D+ + + + + L A GY+ S EEA+ LF ERE + D+VI D + +
Sbjct: 8 LLILDDDAGVVDFLRESLDARGYEAVGRTSPEEALALF-EREPF-DLVITDVEMPRMRGT 65
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++++AL P V+++ + GG AVAA++AGA D++ KP +
Sbjct: 66 EVLEALLTRKPGQLVVLITAFGGVELAVAAVKAGACDFVTKPFN 109
[232][TOP]
>UniRef100_B7XV98 Acetoacetate metabolism regulatory protein AtoC
(Ornithine/argininedecarboxylase inhibitor) n=1
Tax=Borrelia garinii Far04 RepID=B7XV98_BORGA
Length = 452
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENL--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLKIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[233][TOP]
>UniRef100_B7XSE8 Acetoacetate metabolism regulatory protein AtoC
(Ornithine/argininedecarboxylase inhibitor) n=1
Tax=Borrelia garinii PBr RepID=B7XSE8_BORGA
Length = 452
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LVAD+ + +E + L EGY T+ EEA++ + D++I D + +
Sbjct: 4 ILVADDEKNIREGIATYLEDEGYFVFTASDGEEALETIENENL--DVIISDLRMPQISGE 61
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+L+K ++ N + ++L + G AV A++ GA D++ KPLD
Sbjct: 62 KLLKIVKEKNLKIPFIILTAHGTVDSAVDAMREGAYDFLTKPLD 105
[234][TOP]
>UniRef100_B5GP65 Two-component system response regulator n=1 Tax=Streptomyces
clavuligerus ATCC 27064 RepID=B5GP65_STRCL
Length = 243
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTS-DSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+L+ D+ + +EA+ + L+ EGY + + D I+ K S R PD++++D +D
Sbjct: 10 ILIVDDEPAVREALQRSLAFEGYATEVAVDGIDALAKAESYR---PDLLVLDIQMPRMDG 66
Query: 351 KQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
+ L+A TV VL+L +R V L AGA DY+VKP +
Sbjct: 67 LTAARRLRATGSTVPVLMLTARDTVGDRVTGLDAGADDYLVKPFE 111
[235][TOP]
>UniRef100_A9E4U0 Phosphate regulon transcriptional regulatory protein PhoB n=1
Tax=Oceanibulbus indolifex HEL-45 RepID=A9E4U0_9RHOB
Length = 229
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
VLLV DE + +E + L AEG++ + ++ EEA+ L SE PD+VI+D L+
Sbjct: 8 VLLVEDE-PAQREVLAYNLEAEGFEVRRAEDGEEAMLLVSEAA--PDLVILDWMMPLMSG 64
Query: 351 KQLIKALQALNPT--VAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ + L+ T + V++L +R + V L+ GA DY++KP
Sbjct: 65 IEVCRQLKTRESTRHIPVIMLSARSEEVDTVRGLETGADDYVIKP 109
[236][TOP]
>UniRef100_A5PBG6 Sigma-54 dependent DNA-binding response regulator n=1
Tax=Erythrobacter sp. SD-21 RepID=A5PBG6_9SPHN
Length = 471
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYP-DIVIVDSDNELVD 347
+L++ D+ + + + + EG+ T D+ E+A+++ E D +++D +
Sbjct: 8 LLMLVDDEPAQARVIASLATREGWRALTVDNCEDALQMLGSEEGQGIDTILLDGRVPGEN 67
Query: 348 TKQLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPL 482
I ++A P VAVL+L + P+ AV A++AGA DY+VKP+
Sbjct: 68 ACDFIGRIKAKRPEVAVLMLTASTSPLLAVEAMRAGANDYLVKPV 112
[237][TOP]
>UniRef100_A3VWD7 C4-dicarboxylate transport transcriptional regulatory protein DctD
n=1 Tax=Roseovarius sp. 217 RepID=A3VWD7_9RHOB
Length = 440
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+ + D+ ++++ Q L+ GYD + S EEA+K S YP IV+ D +D
Sbjct: 3 IAIVDDEKDMRQSISQWLALSGYDTEAFPSAEEALK--SLGPDYPGIVVTDVRMPGMDGM 60
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
Q +K L + ++ V+++ G AV A++ GA D++ KP +
Sbjct: 61 QFLKKLMGSDSSLPVIMITGHGDVPMAVEAMRIGAFDFLEKPFN 104
[238][TOP]
>UniRef100_A3VQ47 Response regulator n=1 Tax=Parvularcula bermudensis HTCC2503
RepID=A3VQ47_9PROT
Length = 180
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +3
Query: 177 LVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTKQ 356
L+ D+ + + + + G+D ++S+ EAV L +E P +VD E D +
Sbjct: 12 LIVDDDQPFRTRLGRAMEKRGFDPILAESVAEAVALINEHA--PSYAVVDLRLEDGDGIE 69
Query: 357 LIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKPLD 485
++ L P ++L G AVAA++AGA+DY+ KP D
Sbjct: 70 IVNKLHEKRPDARAIILTGYGNITTAVAAVKAGAIDYLAKPAD 112
[239][TOP]
>UniRef100_A3SW67 Phosphate regulon transcriptional regulatory protein PhoB n=1
Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SW67_9RHOB
Length = 229
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LLV DE + +E + L +EG+D + +++ EEA+ L +E PD++I+D L+
Sbjct: 8 ILLVEDE-PAQREILAYNLESEGFDVRRAENGEEAILLVAE--ALPDLIILDWMMPLLSG 64
Query: 351 KQLIKALQALNPT--VAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ + L+ T + V++L +R + V L+ GA DY+VKP
Sbjct: 65 IEVCRQLKTREDTRNIPVIMLSARSEEVDTVRGLETGADDYVVKP 109
[240][TOP]
>UniRef100_A3SAT9 Phosphate regulon transcriptional regulatory protein PhoB n=1
Tax=Sulfitobacter sp. EE-36 RepID=A3SAT9_9RHOB
Length = 229
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +3
Query: 171 VLLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDT 350
+LLV DE + +E + L +EG+D + +++ EEA+ L +E PD++I+D L+
Sbjct: 8 ILLVEDE-PAQREILAYNLESEGFDVRRAENGEEAILLVAE--ALPDLIILDWMMPLLSG 64
Query: 351 KQLIKALQALNPT--VAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ + L+ T + V++L +R + V L+ GA DY+VKP
Sbjct: 65 IEVCRQLKTREDTRNIPVIMLSARSEEVDTVRGLETGADDYVVKP 109
[241][TOP]
>UniRef100_A5WKS5 Two component system response transcriptional regulatory protein
prrA n=7 Tax=Mycobacterium tuberculosis complex
RepID=A5WKS5_MYCTF
Length = 236
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ T+ ++ A L S E PD +++D + ++D
Sbjct: 13 VLVVDDDSDVLASLERGLRLSGFEVATA--VDGAEALRSATENRPDAIVLDINMPVLDGV 70
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 71 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 112
[242][TOP]
>UniRef100_P0A5Z7 Transcriptional regulatory protein prrA n=2 Tax=Mycobacterium
tuberculosis complex RepID=PRRA_MYCBO
Length = 233
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 174 LLVADELSSDKEAVVQMLSAEGYDDQTSDSIEEAVKLFSEREVYPDIVIVDSDNELVDTK 353
+LV D+ S ++ + L G++ T+ ++ A L S E PD +++D + ++D
Sbjct: 10 VLVVDDDSDVLASLERGLRLSGFEVATA--VDGAEALRSATENRPDAIVLDINMPVLDGV 67
Query: 354 QLIKALQALNPTVAVLVLGSRGGPMGAVAALQAGAVDYMVKP 479
++ AL+A++ V V VL +R VA L+AGA DY+VKP
Sbjct: 68 SVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKP 109
[243][TOP]
>UniRef100_UPI0001982DE4 PREDICTED: similar to leucine-rich repeat family protein n=1
Tax=Vitis vinifera RepID=UPI0001982DE4
Length = 569
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/106 (34%), Positives = 41/106 (38%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P C PP PP+ PPP P + P P PPP S P P PP P
Sbjct: 125 PPEPECPPPPPPSPPPPPPPSPPPPPSPPPPPPPSPPPPP-----SPP----------PP 169
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCHC*ARRQRAARA 166
PP P PPP P P PPPP AR + A +A
Sbjct: 170 PPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPVDRNARLKIALKA 215
[244][TOP]
>UniRef100_UPI00016E1896 UPI00016E1896 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E1896
Length = 695
Score = 53.5 bits (127), Expect = 7e-06
Identities = 36/90 (40%), Positives = 36/90 (40%)
Frame = -2
Query: 474 SPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPP 295
SP PP P APPP P P PAPPP P P A PPA P PP
Sbjct: 598 SPGPPPPPAPAPPPAPAPPAPAPPPAPPPPPPPPPPP--APPPPPA----PPPPPPPAPP 651
Query: 294 FPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
P PPP P P APPPP
Sbjct: 652 PPPAPPPPPAPAPPPAPPPPPPPPPAPPPP 681
Score = 53.1 bits (126), Expect = 9e-06
Identities = 36/93 (38%), Positives = 36/93 (38%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
PA P PP PP APPP P P P PPP P AP PP P
Sbjct: 622 PAPPPPPPPPPPPAPPPPP-----APPPPPPPAPPPPPAP------PPP-------PAPA 663
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P PPP P P APPPP
Sbjct: 664 PPPAPPPPPPPPPAPPPPPAPPP---PPAPPPP 693
[245][TOP]
>UniRef100_Q9IGT7 163R* (Fragment) n=1 Tax=Porcine adenovirus 3 RepID=Q9IGT7_ADEP3
Length = 163
Score = 53.5 bits (127), Expect = 7e-06
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P P SPP P PPPRPW P P P +A A P A CPP
Sbjct: 49 PPRPPQSPPPLPPRPPPRPWPAAVSPPPPAAPAAAAAAPPAPAASCPPPRSDPPM----E 104
Query: 303 TPPFPKTTSPPPRCCPT----SGHRIPLRSASAPPP 208
TPP +T SPP SG R RS PP
Sbjct: 105 TPPGTQTPSPPSPAAAVAAERSGSRPAPRSGQGRPP 140
[246][TOP]
>UniRef100_Q9SBM1 Hydroxyproline-rich glycoprotein DZ-HRGP n=1 Tax=Volvox carteri f.
nagariensis RepID=Q9SBM1_VOLCA
Length = 409
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/93 (36%), Positives = 39/93 (41%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+ P PP PP +PPPRP P P PP +P +P PP P
Sbjct: 190 PSPPPSPPPSPPPSPPPRPPPSPNPPSPRPP--SPSPPSP-----RPP----------PR 232
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PPFP + PPPR P P PPPP
Sbjct: 233 RPPFPPPSPPPPRPPP------PAPPPPRPPPP 259
[247][TOP]
>UniRef100_Q948Y7 VMP3 protein n=1 Tax=Volvox carteri f. nagariensis
RepID=Q948Y7_VOLCA
Length = 687
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/93 (36%), Positives = 40/93 (43%)
Frame = -2
Query: 483 PAASPCSPPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPG 304
P+A P SPP PP+ PPP P P P+PPP P +P PP
Sbjct: 590 PSAPPPSPP-PPSPPPPNP------PPPSPPPPNPPPPSP------PPP---------SP 627
Query: 303 TPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPP 205
PP P +PPP P R P +PPPP
Sbjct: 628 PPPSPPPPNPPPPSPPPPSPRPPTPPPPSPPPP 660
[248][TOP]
>UniRef100_Q6ZD62 Os08g0108300 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6ZD62_ORYSJ
Length = 342
Score = 53.5 bits (127), Expect = 7e-06
Identities = 41/109 (37%), Positives = 43/109 (39%), Gaps = 14/109 (12%)
Frame = -2
Query: 483 PAASPCSPPRPPA-APPP-----------RPWARRGCPVPA--PPPWGSAPAAP**AVWC 346
P A P PP PP APPP P RR P PA PPP AP P
Sbjct: 53 PPAPPIRPPSPPGRAPPPPGRAPPPPSQAPPPPRRAPPPPALPPPPPRRAPPPP----SM 108
Query: 345 PPAHCLNQQ*QCPGTPPFPKTTSPPPRCCPTSGHRIPLRSASAPPPPCH 199
PP + P TPP P +PPP P P APPPP H
Sbjct: 109 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSH 157
[249][TOP]
>UniRef100_C1MY88 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MY88_9CHLO
Length = 1591
Score = 53.5 bits (127), Expect = 7e-06
Identities = 38/99 (38%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = -2
Query: 486 DPAASPCSPPRPPA---APPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ* 316
+P +P SP PPA A PP P R PA P W S P P V PP LN
Sbjct: 367 EPVVAPSSPETPPAGSPATPPLPRPPRPPGAPASPVWASTPDVPPRPVATPPP--LNTP- 423
Query: 315 QCPGTPPFPKTTSPP--PRCCPTSGHRIPLRSASAPPPP 205
P PP P S P PR L+S + PPPP
Sbjct: 424 --PAVPPVPAVPSSPAQPRAPIVEVPEAVLKSPTPPPPP 460
Score = 53.5 bits (127), Expect = 7e-06
Identities = 41/99 (41%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Frame = -2
Query: 471 PCSPPRPPAAPPPRPWARRGCPVPAP-----PPWGSAPAAP**AVWCPPAHCLNQQ*QCP 307
P SPPR P +PPP A P PAP PP APAAP P
Sbjct: 1114 PLSPPRAPRSPPPDAPA---MPPPAPDRPGLPPRPGAPAAP----------------ATP 1154
Query: 306 GTPPFP---KTTSPPPRCCPTSGHRIPLRSASAP--PPP 205
GTPP P + SPPPR P+ R P R+ S P PPP
Sbjct: 1155 GTPPSPVVVEEKSPPPR-APSEPERSPPRAPSEPGRPPP 1192
[250][TOP]
>UniRef100_C0PLL4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PLL4_MAIZE
Length = 255
Score = 53.5 bits (127), Expect = 7e-06
Identities = 38/93 (40%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 462 PPRPPAAPPPRPWARRGCPVPAPPPWGSAPAAP**AVWCPPAHCLNQQ*QCPGTPPFPKT 283
PPR P PPPRP CP PAPPP SA A +W P P TPP P +
Sbjct: 114 PPRRPRCPPPRP-----CPSPAPPP-PSAAARGAPRLWTDPLR------PWPATPPPPPS 161
Query: 282 TSPP----PRCC---PTSGHRIPLRSASAPPPP 205
+PP PR PT PL PPPP
Sbjct: 162 AAPPGPPGPRGAARPPTPPPPSPLPVEQPPPPP 194