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[1][TOP] >UniRef100_Q9FYU1 Fe-hydrogenase n=1 Tax=Chlamydomonas reinhardtii RepID=Q9FYU1_CHLRE Length = 497 Score = 259 bits (662), Expect = 9e-68 Identities = 134/134 (100%), Positives = 134/134 (100%) Frame = +3 Query: 135 MSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAAAPA 314 MSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAAAPA Sbjct: 1 MSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAAAPA 60 Query: 315 AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLR 494 AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLR Sbjct: 61 AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLR 120 Query: 495 RLGFDEVFDTLFGA 536 RLGFDEVFDTLFGA Sbjct: 121 RLGFDEVFDTLFGA 134 [2][TOP] >UniRef100_Q56UD8 Plastid FeFe-hydrogenase n=1 Tax=Chlamydomonas moewusii RepID=Q56UD8_CHLMO Length = 458 Score = 92.4 bits (228), Expect = 2e-17 Identities = 66/142 (46%), Positives = 76/142 (53%), Gaps = 8/142 (5%) Frame = +3 Query: 135 MSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAAAPA 314 M L+ +PC AVS + + +A P A VR AP R A A AAPA Sbjct: 1 MQTLLKRPCIAVSAKPKASKAV-----LPFRAYVVR-------APVLRGAASAAAGAAPA 48 Query: 315 AEAPL--------SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 A A + +H Q AEL KPK + K V VAPAVRVAI+E LGLAPGA TP Sbjct: 49 APAAVPKKADAAPAHWQLVAAELVKPKRE---KLTVVSVAPAVRVAISEALGLAPGAVTP 105 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 QL GLRRLGF +VFDT A Sbjct: 106 GQLVAGLRRLGFTKVFDTNLAA 127 [3][TOP] >UniRef100_Q8VX03 Fe-hydrogenase n=1 Tax='Chlorella' fusca RepID=Q8VX03_CHLFU Length = 436 Score = 90.9 bits (224), Expect = 5e-17 Identities = 56/97 (57%), Positives = 64/97 (65%), Gaps = 8/97 (8%) Frame = +3 Query: 270 ARRLGNVACAAAAPAAE--------APLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRV 425 A R +VA AA P +E A L H QQAL ELAKPK+ +R+ + Q+A AVRV Sbjct: 11 AGRARHVAVRAAGPTSECDCPPTPQAKLPHWQQALDELAKPKE--SRRLMIAQIASAVRV 68 Query: 426 AIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 AIAET+GLAPG T QL GLR LGFD VFDTLFGA Sbjct: 69 AIAETIGLAPGDVTIGQLVTGLRMLGFDYVFDTLFGA 105 [4][TOP] >UniRef100_Q9AR66 Fe-hydrogenase n=1 Tax=Scenedesmus obliquus RepID=Q9AR66_SCEOB Length = 449 Score = 88.2 bits (217), Expect = 3e-16 Identities = 50/77 (64%), Positives = 56/77 (72%) Frame = +3 Query: 306 APAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAE 485 APA +AP H QQ L ELAKPK+ RK + Q+APAVRVAIAET+GL PG T Q+ Sbjct: 47 APAPKAP--HWQQTLDELAKPKEQ--RKVMIAQIAPAVRVAIAETMGLNPGDVTVGQMVT 102 Query: 486 GLRRLGFDEVFDTLFGA 536 GLR LGFD VFDTLFGA Sbjct: 103 GLRMLGFDYVFDTLFGA 119 [5][TOP] >UniRef100_Q8VZZ0 Fe-only hydrogenase n=1 Tax=Chlamydomonas reinhardtii RepID=Q8VZZ0_CHLRE Length = 505 Score = 87.4 bits (215), Expect = 6e-16 Identities = 56/123 (45%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Frame = +3 Query: 186 SCRARQVAPRAPLAASTVRVALA------TLEAPARRLGNVACAAAAPAAEAPLSHVQQA 347 +C R AP P A + A + + P+ + + A A + H + A Sbjct: 16 ACARRTNAPAHPAAVVPCLPSRAGKFFNLSQKVPSSQSARGSTIRVAATATDAVPHWKLA 75 Query: 348 LAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTL 527 L EL KPKD RK + QVAPAVRVAIAE+ GLAPGA +P +LA GLR LGFD+VFDTL Sbjct: 76 LEELDKPKDGG-RKVLIAQVAPAVRVAIAESFGLAPGAVSPGKLATGLRALGFDQVFDTL 134 Query: 528 FGA 536 F A Sbjct: 135 FAA 137 [6][TOP] >UniRef100_Q6T533 Iron-hydrogenase HydA2 n=1 Tax=Chlamydomonas reinhardtii RepID=Q6T533_CHLRE Length = 505 Score = 87.4 bits (215), Expect = 6e-16 Identities = 56/123 (45%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Frame = +3 Query: 186 SCRARQVAPRAPLAASTVRVALA------TLEAPARRLGNVACAAAAPAAEAPLSHVQQA 347 +C R AP P A V + + + P+ + + A A + H + A Sbjct: 16 ACARRTNAPAHPAAVVPVLPSRGDKFFNLSQKVPSSQPARGSTIRVAATATDAVPHWKLA 75 Query: 348 LAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTL 527 L EL KPKD RK + QVAPAVRVAIAE+ GLAPGA +P +LA GLR LGFD+VFDTL Sbjct: 76 LEELDKPKDGG-RKVLIAQVAPAVRVAIAESFGLAPGAVSPGKLAAGLRALGFDQVFDTL 134 Query: 528 FGA 536 F A Sbjct: 135 FAA 137 [7][TOP] >UniRef100_Q6T532 Iron-hydrogenase HydA2 n=1 Tax=Chlamydomonas reinhardtii RepID=Q6T532_CHLRE Length = 505 Score = 87.4 bits (215), Expect = 6e-16 Identities = 56/123 (45%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Frame = +3 Query: 186 SCRARQVAPRAPLAASTVRVALA------TLEAPARRLGNVACAAAAPAAEAPLSHVQQA 347 +C R AP P A V + + + P+ + + A A + H + A Sbjct: 16 ACARRTNAPAHPAAVVPVLPSRGDKFFNLSQKVPSSQPARGSTIRVAATATDAVPHWKLA 75 Query: 348 LAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTL 527 L EL KPKD RK + QVAPAVRVAIAE+ GLAPGA +P +LA GLR LGFD+VFDTL Sbjct: 76 LEELDKPKDGG-RKVLIAQVAPAVRVAIAESFGLAPGAVSPGKLAAGLRALGFDQVFDTL 134 Query: 528 FGA 536 F A Sbjct: 135 FAA 137 [8][TOP] >UniRef100_Q9AU60 Fe-hydrogenase (Fragment) n=1 Tax=Scenedesmus obliquus RepID=Q9AU60_SCEOB Length = 403 Score = 75.1 bits (183), Expect = 3e-12 Identities = 43/68 (63%), Positives = 48/68 (70%) Frame = +3 Query: 333 HVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDE 512 H QQ L ELAKPK+ RK + Q+APAVR IAET+GL PG T Q+ GLR LGFD Sbjct: 2 HWQQTLDELAKPKE---RKVMIAQIAPAVR-GIAETMGLNPGDVTVGQMVTGLRMLGFDY 57 Query: 513 VFDTLFGA 536 VFDTLFGA Sbjct: 58 VFDTLFGA 65 [9][TOP] >UniRef100_A0LGI9 Hydrogenases, Fe-only n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGI9_SYNFM Length = 576 Score = 72.8 bits (177), Expect = 1e-11 Identities = 49/113 (43%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Frame = +3 Query: 225 AASTVRVALATLEAPA--RRLGNVACAAAAPA-------AEAPLSHVQQALAELAKPKDD 377 A +T TL APA RL NV C A + ++ A LA PK Sbjct: 166 ALTTGHRGFNTLIAPAFNERLANVECVQCGQCSLVCPTGAIHEVDDTEKVWAALADPK-- 223 Query: 378 PTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 KHV VQ APA RV + ET+G APG+ Q+ GLRRLGFD+VFDT F A Sbjct: 224 ---KHVVVQTAPATRVQVGETMGAAPGSIVTGQMVAGLRRLGFDKVFDTDFTA 273 [10][TOP] >UniRef100_C6BWV0 Hydrogenase, Fe-only n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWV0_DESAD Length = 461 Score = 70.9 bits (172), Expect = 6e-11 Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Frame = +3 Query: 261 EAPA-RRLGNVACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAE 437 E PA RR +A AP A + + +AEL DP K + VQ APAVR +IAE Sbjct: 67 EIPAMRRERGLADNDTAPLFAAHFRNDTKRVAELLA---DPANKSM-VQCAPAVRTSIAE 122 Query: 438 TLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 GLAPG TP QLA LRRLGFD V+DT+F A Sbjct: 123 EYGLAPGTLTPGQLAASLRRLGFDAVYDTIFAA 155 [11][TOP] >UniRef100_Q67JF9 Iron hydrogenase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JF9_SYMTH Length = 596 Score = 69.3 bits (168), Expect = 2e-10 Identities = 35/54 (64%), Positives = 40/54 (74%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DPT KHV VQ APAVRV I E GL PGA + ++ GLRRLGFD+VFDT+F A Sbjct: 227 DPT-KHVVVQTAPAVRVQIGEPFGLPPGAVSTGKMVAGLRRLGFDQVFDTVFSA 279 [12][TOP] >UniRef100_A5D0Q2 Hypothetical hydrogenase subunit n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0Q2_PELTS Length = 574 Score = 69.3 bits (168), Expect = 2e-10 Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRA--PLAASTVRVALATLEAPARRLGNVACA 299 RD ++ + C AV + A R L A LA +E ++ C Sbjct: 141 RDPRKCVLCRRCVAVCSNIQTVNALTAQERGFDTLIAPAFNEKLANMECVQCGQCSLVCP 200 Query: 300 AAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQL 479 AA + + V ALA DP +KHV VQ APA RV + ET+G+ PG+ ++ Sbjct: 201 TAAIQEKDDIDKVWAALA-------DP-KKHVVVQTAPATRVQLGETMGMEPGSIVTGKM 252 Query: 480 AEGLRRLGFDEVFDTLFGA 536 GLRRLGF++VFDT F A Sbjct: 253 VAGLRRLGFNKVFDTDFTA 271 [13][TOP] >UniRef100_B8D2G3 NADH dehydrogenase (Ubiquinone) 75 kDa subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2G3_HALOH Length = 578 Score = 68.6 bits (166), Expect = 3e-10 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 9/104 (8%) Frame = +3 Query: 252 ATLEAPA--RRLGNVACA-------AAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQ 404 +T+ PA ++LG +ACA A A + ++ LA P KHV VQ Sbjct: 174 STIITPAFGQKLGEIACANCGQCINACPVGALSEKDDTEKVWEALANPD-----KHVVVQ 228 Query: 405 VAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 APAVRV+I E G+ PG+ +L GLRRLGFD+VFDT F A Sbjct: 229 TAPAVRVSIGEVFGMKPGSLVTGKLMAGLRRLGFDKVFDTNFTA 272 [14][TOP] >UniRef100_C4XQW2 Putative Fe hydrogenase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XQW2_DESMR Length = 475 Score = 67.4 bits (163), Expect = 6e-10 Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 6/132 (4%) Frame = +3 Query: 159 CAAVSIRGSSCRARQV-APRAPLAASTVRVALA---TLEAPARRLGNVACAAAAPAAEAP 326 C ++ G +A+ + A R L V+V A + PA + A A P Sbjct: 32 CPVGAVTGPQGQAQTIDAERCVLCGQCVQVCCAFAAPFDEPAHDPAAIRRQRGASEAAGP 91 Query: 327 L--SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRL 500 + +H + L DP+R + VQ APAVRV +AE GLAPG+ TP +LA GLRRL Sbjct: 92 VFAAHARCDLDAAKVLVADPSRVAM-VQCAPAVRVTLAEEFGLAPGSLTPGKLAAGLRRL 150 Query: 501 GFDEVFDTLFGA 536 GF V+DT F A Sbjct: 151 GFAVVYDTTFAA 162 [15][TOP] >UniRef100_Q2LSB7 Iron only hydrogenase large subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSB7_SYNAS Length = 605 Score = 67.0 bits (162), Expect = 8e-10 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 1/138 (0%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQ-VAPRAPLAASTVRVALATLEAPARRLGNVACAA 302 RD + + C V C + Q VA +P+ P V C Sbjct: 150 RDSSKCINCRRCVTV------CESIQTVAALSPMNRGYESTVSPAFNLPLNETNCVNCGQ 203 Query: 303 AAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLA 482 A + + + E+ K DPTR HV VQ APA+R A+ E G+ PG+ ++ Sbjct: 204 CVMACPVGALYEKDQVDEVWKALQDPTR-HVVVQEAPAIRAALGEEFGMPPGSLVTGKMI 262 Query: 483 EGLRRLGFDEVFDTLFGA 536 LRRLGFD+VFDT F A Sbjct: 263 AALRRLGFDKVFDTNFTA 280 [16][TOP] >UniRef100_C8W2X1 Hydrogenase, Fe-only n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2X1_9FIRM Length = 573 Score = 65.5 bits (158), Expect = 2e-09 Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 1/138 (0%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAA 305 RD ++ + C VS+ + + +AP+ + + A + + + CA Sbjct: 143 RDPRKCILCRRC--VSVCENIQKVTAIAPQERGFDTVIAPAFLASLSDSTCVNCGQCALV 200 Query: 306 AP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLA 482 P AA + VQ+ + LA P KHV VQ APA R+++ E GL PG+ ++ Sbjct: 201 CPTAAIVEKNQVQEVWSALADPA-----KHVVVQTAPATRISVGEIFGLEPGSLVTGKMV 255 Query: 483 EGLRRLGFDEVFDTLFGA 536 LRRLGFD+VFDT F A Sbjct: 256 AALRRLGFDKVFDTDFTA 273 [17][TOP] >UniRef100_C7I6P2 Hydrogenase, Fe-only n=1 Tax=Thermotoga naphthophila RKU-10 RepID=C7I6P2_9THEM Length = 582 Score = 65.1 bits (157), Expect = 3e-09 Identities = 43/87 (49%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Frame = +3 Query: 279 LGNVACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAP 455 +G CAA P A S V+ L EL K + K + VQ AP+VRVAI E G AP Sbjct: 192 IGCGQCAAFCPTGAIVENSSVKVVLEELEKKE-----KILVVQTAPSVRVAIGEEFGYAP 246 Query: 456 GATTPKQLAEGLRRLGFDEVFDTLFGA 536 G + QL LRRLGFD VFDT FGA Sbjct: 247 GTISTGQLVAALRRLGFDYVFDTNFGA 273 [18][TOP] >UniRef100_Q3ZA52 [Fe] hydrogenase, large subunit HymC, putative n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3ZA52_DEHE1 Length = 573 Score = 64.3 bits (155), Expect = 5e-09 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 3/91 (3%) Frame = +3 Query: 273 RRLGNVACAAAAPAA-EAPLSHVQQ--ALAELAKPKDDPTRKHVCVQVAPAVRVAIAETL 443 R +GNVACA P+ +++ A+ + DPT KHV VQ AP+VRV++ E L Sbjct: 183 RGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPT-KHVVVQEAPSVRVSLGEEL 241 Query: 444 GLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 GL G K++ LRRLGFD VFDT F A Sbjct: 242 GLPAGTLVAKKMYAALRRLGFDAVFDTNFTA 272 [19][TOP] >UniRef100_A8CR96 Hydrogenase, Fe-only n=1 Tax=Dehalococcoides sp. VS RepID=A8CR96_9CHLR Length = 573 Score = 64.3 bits (155), Expect = 5e-09 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 3/91 (3%) Frame = +3 Query: 273 RRLGNVACAAAAPAA-EAPLSHVQQ--ALAELAKPKDDPTRKHVCVQVAPAVRVAIAETL 443 R +GNVACA P+ +++ A+ + DPT KHV VQ AP+VRV++ E L Sbjct: 183 RGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPT-KHVVVQEAPSVRVSLGEEL 241 Query: 444 GLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 GL G K++ LRRLGFD VFDT F A Sbjct: 242 GLPAGTLVAKKMYAALRRLGFDAVFDTNFTA 272 [20][TOP] >UniRef100_Q9WY44 NADP-reducing hydrogenase, subunit D, putative n=1 Tax=Thermotoga maritima RepID=Q9WY44_THEMA Length = 608 Score = 63.9 bits (154), Expect = 7e-09 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Frame = +3 Query: 279 LGNVACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAP 455 +G CAA P A S V+ L EL K + K + VQ AP+VRVAI E G AP Sbjct: 218 IGCGQCAAFCPTGAIVENSAVKVVLEELEKKE-----KILVVQTAPSVRVAIGEEFGYAP 272 Query: 456 GATTPKQLAEGLRRLGFDEVFDTLFGA 536 G + Q+ LRRLGFD VFDT FGA Sbjct: 273 GTISTGQMVAALRRLGFDYVFDTNFGA 299 [21][TOP] >UniRef100_B1L9V1 Hydrogenase, Fe-only n=1 Tax=Thermotoga sp. RQ2 RepID=B1L9V1_THESQ Length = 582 Score = 63.9 bits (154), Expect = 7e-09 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Frame = +3 Query: 279 LGNVACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAP 455 +G CAA P A S V+ L EL K + K + VQ AP+VRVAI E G AP Sbjct: 192 IGCGQCAAFCPTGAIVENSAVKVVLEELEKKE-----KILVVQTAPSVRVAIGEEFGYAP 246 Query: 456 GATTPKQLAEGLRRLGFDEVFDTLFGA 536 G + Q+ LRRLGFD VFDT FGA Sbjct: 247 GTISTGQMVAALRRLGFDYVFDTNFGA 273 [22][TOP] >UniRef100_C9LT88 Ferredoxin hydrogenase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LT88_9FIRM Length = 586 Score = 63.9 bits (154), Expect = 7e-09 Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C+ P A Q+ L L PK KHV VQVAPAVRV++ + L PGA Sbjct: 201 CSLVCPTGAITEKDDTQRVLDALQDPK-----KHVIVQVAPAVRVSLGDEFHLPPGAIVT 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 Q+ L+RLGFD VFDT FGA Sbjct: 256 GQMVAALKRLGFDRVFDTNFGA 277 [23][TOP] >UniRef100_A5IKM0 Hydrogenase, Fe-only n=2 Tax=Thermotogaceae RepID=A5IKM0_THEP1 Length = 582 Score = 63.9 bits (154), Expect = 7e-09 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Frame = +3 Query: 279 LGNVACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAP 455 +G CAA P A S V+ L EL K + K + VQ AP+VRVAI E G AP Sbjct: 192 IGCGQCAAFCPTGAIVENSAVKVVLEELEKKE-----KILVVQTAPSVRVAIGEEFGYAP 246 Query: 456 GATTPKQLAEGLRRLGFDEVFDTLFGA 536 G + Q+ LRRLGFD VFDT FGA Sbjct: 247 GTISTGQMVAALRRLGFDYVFDTNFGA 273 [24][TOP] >UniRef100_B9K6S8 NADP-reducing hydrogenase, subunit D n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K6S8_THENN Length = 600 Score = 63.5 bits (153), Expect = 9e-09 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +3 Query: 279 LGNVACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAP 455 +G CA P A S V+ L EL K + K + VQ AP+VRVAI E G AP Sbjct: 210 IGCGQCAVFCPTGAIVENSAVKVVLEELEKKE-----KILVVQTAPSVRVAIGEEFGYAP 264 Query: 456 GATTPKQLAEGLRRLGFDEVFDTLFGA 536 G + QL LRRLGFD VFDT FGA Sbjct: 265 GTVSTGQLVAALRRLGFDYVFDTNFGA 291 [25][TOP] >UniRef100_A4J526 Hydrogenases, Fe-only n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J526_DESRM Length = 593 Score = 63.5 bits (153), Expect = 9e-09 Identities = 32/54 (59%), Positives = 36/54 (66%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 D + KHV VQ APAVRVAIAE G+ PG + +L LRRLGFD V DT F A Sbjct: 223 DDSTKHVVVQTAPAVRVAIAEEFGMEPGTVSTGKLVAALRRLGFDSVMDTDFAA 276 [26][TOP] >UniRef100_A6TKZ8 Hydrogenase, Fe-only n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKZ8_ALKMQ Length = 582 Score = 63.2 bits (152), Expect = 1e-08 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P AA ++H ++ L P K+V VQ APA+RVA+ E G+ G+ Sbjct: 203 CVAVCPTAALTEVNHTRKVWKALHDPD-----KYVVVQTAPAIRVALGELFGMEAGSLVT 257 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +LA LRRLGFD+V+DT FGA Sbjct: 258 GKLAASLRRLGFDQVYDTDFGA 279 [27][TOP] >UniRef100_C3W9A4 NADH:ubiquinone oxidoreductase subunit n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9A4_FUSMR Length = 585 Score = 63.2 bits (152), Expect = 1e-08 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + + + +L PK K V VQVAPAVRVAI E G+APG Sbjct: 201 CVAVCPVGALYETDNTFKLVEDLMNPK-----KKVIVQVAPAVRVAIGELFGVAPGIDMT 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 K+L L+RLGFD VFDT F A Sbjct: 256 KKLTTALKRLGFDGVFDTNFAA 277 [28][TOP] >UniRef100_Q3ZWM9 Putative [Fe] hydrogenase, large subunit HymC n=1 Tax=Dehalococcoides sp. CBDB1 RepID=Q3ZWM9_DEHSC Length = 573 Score = 62.8 bits (151), Expect = 2e-08 Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Frame = +3 Query: 273 RRLGNVACAAAAPA-------AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAI 431 R +GNVACA A S V A +A P KHV VQ AP++RV++ Sbjct: 183 RGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPA-----KHVVVQEAPSIRVSL 237 Query: 432 AETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 E LGL G K++ LRRLGFD VFDT F A Sbjct: 238 GEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTA 272 [29][TOP] >UniRef100_B8D1I2 NADH dehydrogenase I subunit G n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1I2_HALOH Length = 570 Score = 62.8 bits (151), Expect = 2e-08 Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Frame = +3 Query: 279 LGNVACAA------AAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAET 440 +GNV C A P + + + E+ +D K+V VQ APAVRVA++E Sbjct: 188 MGNVECTNCGQCIHACPTGALHEVYHYEKVWEVLHDRD----KYVVVQTAPAVRVALSEA 243 Query: 441 LGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 GL PG Q+ GLRRLGFD VFDT F A Sbjct: 244 FGLKPGTIFTGQMVAGLRRLGFDRVFDTNFTA 275 [30][TOP] >UniRef100_B8D0X4 NADH dehydrogenase I subunit G n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X4_HALOH Length = 666 Score = 62.8 bits (151), Expect = 2e-08 Identities = 37/81 (45%), Positives = 47/81 (58%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C A ++ +S V +A+ +DP K V VQ+APAVRVAI E G+ PG Sbjct: 199 CPTGALTIKSDISRVWEAI-------NDPA-KTVVVQIAPAVRVAIGEEFGMEPGEIQMG 250 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 QL L+RLGFD+VFDT F A Sbjct: 251 QLVAALKRLGFDKVFDTSFAA 271 [31][TOP] >UniRef100_B2V1E4 Periplasmic [Fe] hydrogenase 1 n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V1E4_CLOBA Length = 646 Score = 62.8 bits (151), Expect = 2e-08 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +3 Query: 291 ACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 AC +A P A +++ + L +LA P K V Q+APA+RVAI E G PG Sbjct: 259 ACISACPVDAITAGNNIIKFLRDLATPN-----KVVITQMAPAIRVAIGEAFGFEPGENV 313 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 K++A GLR+LG D VFDT +GA Sbjct: 314 EKKIAAGLRKLGVDYVFDTTWGA 336 [32][TOP] >UniRef100_A5FSK7 Hydrogenase, Fe-only n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FSK7_DEHSB Length = 573 Score = 62.8 bits (151), Expect = 2e-08 Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Frame = +3 Query: 273 RRLGNVACAAAAPA-------AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAI 431 R +GNVACA A S V A +A P KHV VQ AP++RV++ Sbjct: 183 RGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPA-----KHVVVQEAPSIRVSL 237 Query: 432 AETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 E LGL G K++ LRRLGFD VFDT F A Sbjct: 238 GEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTA 272 [33][TOP] >UniRef100_C5UUW6 Periplasmic [Fe] hydrogenase 1 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUW6_CLOBO Length = 646 Score = 62.8 bits (151), Expect = 2e-08 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +3 Query: 291 ACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 AC +A P A +++ + L +LA P K V Q+APA+RVAI E G PG Sbjct: 259 ACISACPVDAITAGNNIIKFLRDLATPN-----KVVITQMAPAIRVAIGEAFGFEPGENV 313 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 K++A GLR+LG D VFDT +GA Sbjct: 314 EKKIAAGLRKLGVDYVFDTTWGA 336 [34][TOP] >UniRef100_C3WC94 Hydrogenase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WC94_FUSMR Length = 642 Score = 62.8 bits (151), Expect = 2e-08 Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A H L +LA P RK V VQVAPAVRVAI E G PG Sbjct: 259 CVAACPVGAIFEGDHTLNLLRDLATP-----RKKVVVQVAPAVRVAIGEAFGFEPGTNVE 313 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 K+L L++LG D VFDT + A Sbjct: 314 KKLVGALKKLGVDYVFDTTWAA 335 [35][TOP] >UniRef100_C0GH14 Hydrogenase, Fe-only n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH14_9FIRM Length = 574 Score = 62.8 bits (151), Expect = 2e-08 Identities = 39/81 (48%), Positives = 47/81 (58%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C A ++ + V QA+A DP KHV VQ APAV+V+IAE LGL PG Sbjct: 201 CPVGAIYEKSVVDDVWQAIA-------DPN-KHVVVQAAPAVQVSIAEALGLEPGTPMAG 252 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD VF T F A Sbjct: 253 KMAAALRRLGFDRVFTTEFTA 273 [36][TOP] >UniRef100_Q2RHS0 Iron hydrogenase, small subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHS0_MOOTA Length = 573 Score = 62.4 bits (150), Expect = 2e-08 Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Frame = +3 Query: 129 DKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPA--RRLGNVACAA 302 D ALV +P + R C A + +A + + T+ APA +L ++AC Sbjct: 136 DSTPALVREPDKCILCR--RCVAVCEKVQGVMAIAPLGRGFDTVIAPAFQEKLVDIACVE 193 Query: 303 AAPA-------AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 A + + A LA P+ K V VQ APA RV+I + GLAPG+ Sbjct: 194 CGQCTLVCPVGALYEKDYTSEVWAALADPE-----KFVVVQTAPATRVSIGQEFGLAPGS 248 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 Q+ LRRLGFD VFDT F A Sbjct: 249 INTGQMVAALRRLGFDRVFDTDFSA 273 [37][TOP] >UniRef100_Q46508 Potential NAD-reducing hydrogenase subunit n=1 Tax=Desulfovibrio fructosovorans RepID=Q46508_DESFR Length = 585 Score = 62.4 bits (150), Expect = 2e-08 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A ++ + + LA P K V VQ APAVR A+ E LG+APG + Sbjct: 202 CVAVCPTGALVEHEYIWEVVEALANPD-----KVVIVQTAPAVRAALGEDLGVAPGTSVT 256 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD VFDT F A Sbjct: 257 GKMAAALRRLGFDHVFDTDFAA 278 [38][TOP] >UniRef100_A9BFV1 Hydrogenase, Fe-only n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BFV1_PETMO Length = 578 Score = 62.0 bits (149), Expect = 3e-08 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A S++ + EL + KHV VQ APAVRVA+AE G PG + Sbjct: 199 CVAVCPTGALVERSYIDEVWKELENEE-----KHVVVQTAPAVRVALAEEFGYEPGTIST 253 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L L+ +GFD+VFDT FGA Sbjct: 254 GKLVGALKLMGFDKVFDTNFGA 275 [39][TOP] >UniRef100_A6LUB5 Hydrogenase, Fe-only n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LUB5_CLOB8 Length = 644 Score = 62.0 bits (149), Expect = 3e-08 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +3 Query: 291 ACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 AC +A P A + + L +LA P K V Q+APAVRVAI E G PG Sbjct: 257 ACVSACPVDAISAGDNTMLFLRDLATPN-----KVVITQMAPAVRVAIGEAFGFEPGENV 311 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 K++A GLR+LG D VFDT +GA Sbjct: 312 EKKIAAGLRKLGVDYVFDTSWGA 334 [40][TOP] >UniRef100_B5Y704 Hydrogenase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y704_COPPD Length = 581 Score = 61.6 bits (148), Expect = 3e-08 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A H+Q+ LA RKHV VQ APAVRVA+ E G+ G+ Sbjct: 197 CITACPTGALYEKDHIQRVYRALADK-----RKHVVVQTAPAVRVALGEEFGMPVGSIVT 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LRRLGF+ VFDT FGA Sbjct: 252 GKMVAALRRLGFEVVFDTDFGA 273 [41][TOP] >UniRef100_B2TM76 Periplasmic [Fe] hydrogenase 1 n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TM76_CLOBB Length = 646 Score = 61.6 bits (148), Expect = 3e-08 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +3 Query: 291 ACAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 AC +A P A ++ + L +LA P K V Q+APA+RVAI E G PG Sbjct: 259 ACISACPVDAITAGNNTIKFLRDLATPN-----KVVITQMAPAIRVAIGEAFGFEPGENV 313 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 K++A GLR+LG D VFDT +GA Sbjct: 314 EKKIAAGLRKLGVDYVFDTTWGA 336 [42][TOP] >UniRef100_C9KNE7 Ferredoxin hydrogenase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNE7_9FIRM Length = 589 Score = 61.2 bits (147), Expect = 4e-08 Identities = 30/54 (55%), Positives = 38/54 (70%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DP +KHV VQVAP+VRV++ + G+ PGA Q+ L LGFD+VFDT FGA Sbjct: 233 DP-KKHVIVQVAPSVRVSLGDAFGMEPGAIVTGQMVTALHLLGFDKVFDTNFGA 285 [43][TOP] >UniRef100_A9BHJ5 Hydrogenase, Fe-only n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHJ5_PETMO Length = 569 Score = 60.5 bits (145), Expect(2) = 5e-08 Identities = 31/50 (62%), Positives = 34/50 (68%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K+V VQ APAVRVAIAE PG KQ+ GLR LGFD+VFDT F A Sbjct: 225 KYVIVQTAPAVRVAIAEEFDAEPGKIATKQMVAGLRLLGFDKVFDTNFAA 274 Score = 20.4 bits (41), Expect(2) = 5e-08 Identities = 7/14 (50%), Positives = 7/14 (50%) Frame = +2 Query: 308 TRCGGAFESCPAGA 349 T CG CP GA Sbjct: 193 TNCGQCILECPTGA 206 [44][TOP] >UniRef100_A1HP37 Hydrogenases, Fe-only n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP37_9FIRM Length = 574 Score = 60.8 bits (146), Expect = 6e-08 Identities = 36/81 (44%), Positives = 46/81 (56%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C A + + V QAL++ AK HV VQ APAVRVA+ E LG+ G+ Sbjct: 201 CPTGAIVEKDDTAAVWQALSDPAK--------HVVVQTAPAVRVALGEALGMGTGSIVTG 252 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ LRRLGFD+VFDT F A Sbjct: 253 KMVAALRRLGFDKVFDTDFTA 273 [45][TOP] >UniRef100_B8I631 Hydrogenase, Fe-only n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I631_CLOCE Length = 574 Score = 60.5 bits (145), Expect = 8e-08 Identities = 29/49 (59%), Positives = 33/49 (67%) Frame = +3 Query: 390 HVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 HV VQ APAVRVA+ E G APG ++ LRRLGFD+VFDT F A Sbjct: 224 HVVVQTAPAVRVALGEEFGFAPGTNVEGKMVAALRRLGFDKVFDTNFSA 272 [46][TOP] >UniRef100_A4J9N7 Hydrogenases, Fe-only n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J9N7_DESRM Length = 594 Score = 60.1 bits (144), Expect = 1e-07 Identities = 30/55 (54%), Positives = 37/55 (67%) Frame = +3 Query: 372 DDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 +DP KHV VQ APAVRVA+ E G+ G ++ L+R+GFDEVFDT FGA Sbjct: 239 NDPD-KHVIVQTAPAVRVALGELFGMEAGTVVTGKMVTALKRMGFDEVFDTDFGA 292 [47][TOP] >UniRef100_A8RJT8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJT8_9CLOT Length = 581 Score = 60.1 bits (144), Expect = 1e-07 Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + A +A PK KHV VQ APAVR + E GL G Sbjct: 197 CIAVCPTGALTEKDYTADVFAAIADPK-----KHVIVQTAPAVRAGLGEEFGLPIGTDVE 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD+VFDT F A Sbjct: 252 GKMAAALRRLGFDKVFDTNFSA 273 [48][TOP] >UniRef100_Q315X0 Ferredoxin hydrogenase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315X0_DESDG Length = 458 Score = 59.7 bits (143), Expect = 1e-07 Identities = 30/49 (61%), Positives = 33/49 (67%) Frame = +3 Query: 390 HVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 H VQ APAVR AI E G+ GA TP +LA LRRLGFD V+DT F A Sbjct: 107 HSMVQCAPAVRAAIGEEFGMPAGALTPGRLAAALRRLGFDRVYDTNFAA 155 [49][TOP] >UniRef100_C4XGF9 Fe hydrogenase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGF9_DESMR Length = 585 Score = 59.7 bits (143), Expect = 1e-07 Identities = 29/50 (58%), Positives = 35/50 (70%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APAVR A+ E LG+APG + ++A LRRLGFD +FDT F A Sbjct: 229 KVVIVQTAPAVRAALGEDLGIAPGTSVTGKMAAALRRLGFDHIFDTDFAA 278 [50][TOP] >UniRef100_C0D6H4 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6H4_9CLOT Length = 419 Score = 59.7 bits (143), Expect = 1e-07 Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + A +A PK KHV VQ APAVR + E GL G Sbjct: 197 CIAVCPTGALTEKDYTGDVFAAIADPK-----KHVIVQTAPAVRAGLGEEFGLPIGTNVE 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD+VFDT F A Sbjct: 252 GKMAAALRRLGFDKVFDTDFSA 273 [51][TOP] >UniRef100_Q67J76 Iron hydrogenase n=1 Tax=Symbiobacterium thermophilum RepID=Q67J76_SYMTH Length = 456 Score = 59.3 bits (142), Expect = 2e-07 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +3 Query: 309 PAAEAPLSHV-QQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAE 485 P+ + PL + A+L K ++V VQVAPAVRVAIAE G+ G+ P ++A Sbjct: 74 PSVKEPLFAAWNEGRAKLVKEALADPDRYVMVQVAPAVRVAIAEEFGMPLGSLAPGKMAA 133 Query: 486 GLRRLGFDEVFDTLFGA 536 LRRLGFD V+ T F A Sbjct: 134 ALRRLGFDRVYSTDFTA 150 [52][TOP] >UniRef100_C4C6P2 NADH:ubiquinone oxidoreductase chain G-like protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=C4C6P2_9FUSO Length = 389 Score = 59.3 bits (142), Expect = 2e-07 Identities = 31/54 (57%), Positives = 36/54 (66%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DPT K V VQ APAVRVA+ E G APG + ++ LR+LGFD VFDT F A Sbjct: 227 DPT-KTVIVQTAPAVRVALGEEFGYAPGTSVTGKMVSSLRKLGFDRVFDTDFAA 279 [53][TOP] >UniRef100_A6TVH0 Hydrogenase, Fe-only n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVH0_ALKMQ Length = 551 Score = 58.9 bits (141), Expect = 2e-07 Identities = 35/83 (42%), Positives = 46/83 (55%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V+C AA + + V A+ +DP HV VQ APAVR A+ E GL G+ Sbjct: 199 VSCPVAALREKEDIERVWDAI-------EDP-EIHVVVQTAPAVRAALGEEFGLPIGSRV 250 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++ L+RLGFD+VFDT FGA Sbjct: 251 TGKMVASLKRLGFDQVFDTNFGA 273 [54][TOP] >UniRef100_C7RI01 Hydrogenase, Fe-only n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RI01_ANAPD Length = 577 Score = 58.9 bits (141), Expect = 2e-07 Identities = 29/50 (58%), Positives = 33/50 (66%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 KHV VQVAPAVRVA+ E G+ G ++ LRRLGFD VFDT F A Sbjct: 226 KHVIVQVAPAVRVALGEMFGIRVGTNVEGKIVTALRRLGFDRVFDTNFAA 275 [55][TOP] >UniRef100_C6PR43 Hydrogenase, Fe-only n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PR43_9CLOT Length = 580 Score = 58.9 bits (141), Expect = 2e-07 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +3 Query: 117 YRRRDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVAC 296 YR DK ++ + C + +C+ R + L+ G C Sbjct: 147 YRNLDK--CIMCRRCETMCNEVQTCQVYSAVDRGFETVVSPAFGRPMLDTQCTFCGQ--C 202 Query: 297 AAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 + P AA +S+V + +A P K+V VQ APA+RVA+ E G+ PG Sbjct: 203 VSVCPTAALTEVSNVAKVWEVIADPD-----KYVVVQTAPAIRVALGEKFGMEPGTIVTG 257 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ LRRLGFD+V DT F A Sbjct: 258 KMVAALRRLGFDKVCDTDFAA 278 [56][TOP] >UniRef100_B8I4Y6 Hydrogenase, Fe-only n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4Y6_CLOCE Length = 562 Score = 58.5 bits (140), Expect = 3e-07 Identities = 28/50 (56%), Positives = 34/50 (68%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V Q+APAVRVAI E GL PG + ++ LR+LGFD+VFDT GA Sbjct: 221 KRVIAQIAPAVRVAIGEDFGLQPGEISMGKIVSALRKLGFDQVFDTAVGA 270 [57][TOP] >UniRef100_C7IFB9 Hydrogenase, Fe-only n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFB9_9CLOT Length = 592 Score = 58.5 bits (140), Expect = 3e-07 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C P AA + H + ++ P K+V VQ APA+RVA+ E G+ PG Sbjct: 214 CVQVCPTAALTEVYHTDKVWEAISDPD-----KYVIVQTAPAIRVALGELFGMEPGTIVT 268 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ L+R+GFD VFDT FGA Sbjct: 269 GKMVTALKRMGFDAVFDTDFGA 290 [58][TOP] >UniRef100_C7ID53 Hydrogenase, Fe-only n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ID53_9CLOT Length = 574 Score = 58.5 bits (140), Expect = 3e-07 Identities = 28/49 (57%), Positives = 33/49 (67%) Frame = +3 Query: 390 HVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 HV VQ APAVRVA+ E G APG ++ LRRLGF++VFDT F A Sbjct: 224 HVVVQTAPAVRVALGEEFGFAPGTNVEGKMVTALRRLGFNKVFDTNFSA 272 [59][TOP] >UniRef100_A7VZ65 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ65_9CLOT Length = 366 Score = 58.5 bits (140), Expect = 3e-07 Identities = 31/63 (49%), Positives = 39/63 (61%) Frame = +3 Query: 348 LAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTL 527 +A +A PK KHV VQ AP+VR A+ E G+ G ++ LRRLGFD+VFDT Sbjct: 2 VAAIADPK-----KHVVVQTAPSVRAALGEEFGMPIGTNVEGKMVAALRRLGFDKVFDTD 56 Query: 528 FGA 536 FGA Sbjct: 57 FGA 59 [60][TOP] >UniRef100_A6PRE3 Hydrogenase, Fe-only n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=A6PRE3_9BACT Length = 578 Score = 57.8 bits (138), Expect(2) = 3e-07 Identities = 31/55 (56%), Positives = 36/55 (65%) Frame = +3 Query: 372 DDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 +DP K V VQ APAVRVAI E GL PG+ + ++ LR LGFD VFDT F A Sbjct: 224 NDPA-KTVVVQTAPAVRVAIGEAFGLPPGSVSTGKMVTALRMLGFDRVFDTDFAA 277 Score = 20.4 bits (41), Expect(2) = 3e-07 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +2 Query: 314 CGGAFESCPAGA 349 CG ++CP GA Sbjct: 198 CGQCVQACPVGA 209 [61][TOP] >UniRef100_C0QEG4 HydA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEG4_DESAH Length = 464 Score = 58.2 bits (139), Expect = 4e-07 Identities = 29/46 (63%), Positives = 33/46 (71%) Frame = +3 Query: 399 VQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 VQ APAVRVA+ E GLA G TP ++A LRRLGFD V+DT F A Sbjct: 109 VQCAPAVRVALGEEFGLAYGVLTPGKMATSLRRLGFDRVYDTNFAA 154 [62][TOP] >UniRef100_C7IM88 Hydrogenase, Fe-only n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IM88_9CLOT Length = 562 Score = 58.2 bits (139), Expect = 4e-07 Identities = 28/50 (56%), Positives = 34/50 (68%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V Q+APAVRVAI E GL PG + ++ LR+LGFD+VFDT GA Sbjct: 221 KRVIAQIAPAVRVAIGEDFGLQPGQISMGKIVAALRKLGFDQVFDTAVGA 270 [63][TOP] >UniRef100_C0C3P6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3P6_9CLOT Length = 560 Score = 58.2 bits (139), Expect = 4e-07 Identities = 32/81 (39%), Positives = 47/81 (58%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C A P ++Q + + + DP + V VQ+APAVRVA+ + G+ G + Sbjct: 194 CRAVCPTGAIT---IKQNIRPVWEAVADPDTR-VVVQIAPAVRVAVGDKFGIPKGENSLG 249 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 +LA LRR+GFDE++DT FGA Sbjct: 250 KLAAALRRMGFDEIYDTNFGA 270 [64][TOP] >UniRef100_UPI0001966C35 hypothetical protein SUBVAR_01616 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=UPI0001966C35 Length = 585 Score = 57.8 bits (138), Expect = 5e-07 Identities = 34/66 (51%), Positives = 40/66 (60%) Frame = +3 Query: 339 QQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVF 518 Q+A +A P+ K VQ+APAVR A ETLGL P T ++A LRRLGFD VF Sbjct: 213 QRAFDAIADPE-----KITVVQIAPAVRTAWGETLGLTPEQATVHRMAACLRRLGFDYVF 267 Query: 519 DTLFGA 536 DT F A Sbjct: 268 DTSFSA 273 [65][TOP] >UniRef100_Q3A430 NAD-reducing iron-only hydrogenase large subunit n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A430_PELCD Length = 585 Score = 57.8 bits (138), Expect = 5e-07 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A H + + +A P+ K VQ APAVR A+ E G+ PG + Sbjct: 201 CTAVCPVGALVENDHTWKVIDAIADPE-----KVTVVQTAPAVRAALGEACGMEPGQSVT 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD VFDT F A Sbjct: 256 GKMAAALRRLGFDHVFDTDFAA 277 [66][TOP] >UniRef100_B1I4J8 Hydrogenase, Fe-only n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4J8_DESAP Length = 590 Score = 57.8 bits (138), Expect = 5e-07 Identities = 30/54 (55%), Positives = 33/54 (61%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DP KHV VQ APA RV + E GL PG ++ LRRLGFD VFDT F A Sbjct: 222 DPA-KHVVVQTAPATRVTLGEAFGLPPGTPVTGKMVAALRRLGFDRVFDTDFTA 274 [67][TOP] >UniRef100_C5EJT3 Hydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJT3_9FIRM Length = 602 Score = 57.8 bits (138), Expect = 5e-07 Identities = 37/83 (44%), Positives = 44/83 (53%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A L+ V +ALA DP K V VQVAPAVR A+ E GL G Sbjct: 196 VVCPTGALKETDGLTPVWRALA-------DPD-KRVVVQVAPAVRAALGEEFGLPVGTPV 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++A L +GFD+VFDTLF A Sbjct: 248 TGKMASALHEIGFDDVFDTLFSA 270 [68][TOP] >UniRef100_C5EJT2 Hydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJT2_9FIRM Length = 596 Score = 57.8 bits (138), Expect = 5e-07 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + A +A P KHV VQ APAVR + E GL G Sbjct: 197 CIAVCPTGALTEKDYTGDVFAAIADPS-----KHVIVQTAPAVRAGLGEEFGLPIGTDVE 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRRLGFD+VFDT F A Sbjct: 252 GKMAAALRRLGFDKVFDTNFSA 273 [69][TOP] >UniRef100_C4BZY7 Hydrogenase, Fe-only n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=C4BZY7_9FUSO Length = 587 Score = 57.8 bits (138), Expect = 5e-07 Identities = 35/81 (43%), Positives = 43/81 (53%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 CAA P + A ++ K DP K V VQ AP+VR A+ E GL PG Sbjct: 203 CAAVCPTGALVEN---DATWDVVKALGDP-EKTVIVQTAPSVRAALGEEFGLEPGTLVTG 258 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD+VFDT FGA Sbjct: 259 KMVAALRGLGFDKVFDTDFGA 279 [70][TOP] >UniRef100_A8RJR9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJR9_9CLOT Length = 597 Score = 57.8 bits (138), Expect = 5e-07 Identities = 37/83 (44%), Positives = 44/83 (53%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A L+ V +ALA DP K V VQVAPAVR A+ E GL G Sbjct: 196 VVCPTGALKETDGLAPVWRALA-------DP-EKRVVVQVAPAVRAALGEEFGLPVGTPV 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++A L +GFD+VFDTLF A Sbjct: 248 TGKMATALHEIGFDDVFDTLFSA 270 [71][TOP] >UniRef100_A5KJE2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJE2_9FIRM Length = 595 Score = 57.8 bits (138), Expect = 5e-07 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A S++ LA +A D T KHV VQ AP+VR A+ E G G Sbjct: 213 CIAACPTGALYEKSNIDDVLAAIA----DET-KHVVVQPAPSVRAALGEEFGYPMGTDVE 267 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRR+GFD+VFDT F A Sbjct: 268 GKMAAALRRIGFDKVFDTNFSA 289 [72][TOP] >UniRef100_UPI00017F4C5D putative iron-only hydrogenase, catalytic subunit n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F4C5D Length = 593 Score = 57.4 bits (137), Expect = 6e-07 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K + VQVAPAVRVAI E GL PG+ + ++ L+ LGF+ VFDT FGA Sbjct: 227 KTIVVQVAPAVRVAIGEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGA 276 [73][TOP] >UniRef100_Q180Q5 Putative iron-only hydrogenase, catalytic subunit n=1 Tax=Clostridium difficile 630 RepID=Q180Q5_CLOD6 Length = 593 Score = 57.4 bits (137), Expect = 6e-07 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K + VQVAPAVRVAI E GL PG+ + ++ L+ LGF+ VFDT FGA Sbjct: 227 KTIVVQVAPAVRVAIGEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGA 276 [74][TOP] >UniRef100_Q0AU79 (Fe) hydrogenase, large subunit HymC, putative n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AU79_SYNWW Length = 563 Score = 57.4 bits (137), Expect = 6e-07 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 CA P A V++ LA +A P+ K V Q+APAVRVA+AE LG+ GA Sbjct: 187 CALVCPVGAIIENEEVEEFLAAVADPE-----KIVITQIAPAVRVAVAEELGITTGALDM 241 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 GLR+LGFD VF T F A Sbjct: 242 LNFVAGLRQLGFDYVFHTNFTA 263 [75][TOP] >UniRef100_C9XRZ6 Putative iron-only hydrogenase, catalytic subunit n=2 Tax=Clostridium difficile RepID=C9XRZ6_CLODI Length = 593 Score = 57.4 bits (137), Expect = 6e-07 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K + VQVAPAVRVAI E GL PG+ + ++ L+ LGF+ VFDT FGA Sbjct: 227 KTIVVQVAPAVRVAIGEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGA 276 [76][TOP] >UniRef100_C0ETU9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETU9_9FIRM Length = 566 Score = 57.4 bits (137), Expect = 6e-07 Identities = 35/83 (42%), Positives = 47/83 (56%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A + + V +ALA D TR V VQ+APAVRVA+ + G+ G + Sbjct: 196 VVCPTGAITIKHNIHPVWEALA------DKNTR--VIVQIAPAVRVAVGDKFGIPKGENS 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 +L LRR+GFDE++DT FGA Sbjct: 248 LGKLVAALRRMGFDEIYDTDFGA 270 [77][TOP] >UniRef100_B6WA88 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA88_9FIRM Length = 577 Score = 57.4 bits (137), Expect = 6e-07 Identities = 27/50 (54%), Positives = 34/50 (68%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 KH+ VQVAPAVRVA+ E G PG + ++ L+ LGFD+VFDT F A Sbjct: 226 KHLIVQVAPAVRVALGEMFGRKPGESVEGEMVTALKNLGFDKVFDTNFAA 275 [78][TOP] >UniRef100_C4LEV1 Hydrogenase, Fe-only n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEV1_TOLAT Length = 623 Score = 57.0 bits (136), Expect = 8e-07 Identities = 38/126 (30%), Positives = 55/126 (43%) Frame = +3 Query: 159 CAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAAAPAAEAPLSHV 338 C A+ RG+ R +A ++ + + P L+ + Sbjct: 181 CLAIMERGAESRVATFGDKALASSICIECGQCIVHCPT----------------GALTEI 224 Query: 339 QQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVF 518 Q E+ K DDPT KHV +Q APA R +I E GL PG ++ ++ +GFD VF Sbjct: 225 DQT-DEIWKMIDDPT-KHVVIQTAPAPRASIGECFGLEPGTPLTFEMNTAIKMMGFDAVF 282 Query: 519 DTLFGA 536 DT F A Sbjct: 283 DTNFSA 288 [79][TOP] >UniRef100_C9R992 Hydrogenase, Fe-only n=1 Tax=Ammonifex degensii KC4 RepID=C9R992_9THEO Length = 583 Score = 57.0 bits (136), Expect = 8e-07 Identities = 31/54 (57%), Positives = 33/54 (61%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DPT KHV VQ APAV V I E GL G ++ LRRLGFD VFDT F A Sbjct: 222 DPT-KHVVVQTAPAVHVTIGEMFGLPVGTDATGKIVAALRRLGFDAVFDTNFAA 274 [80][TOP] >UniRef100_C1QEI6 Hydrogenase, Fe-only n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QEI6_9SPIR Length = 582 Score = 57.0 bits (136), Expect = 8e-07 Identities = 33/81 (40%), Positives = 45/81 (55%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 CAA P A + + E+ DDP +V VQ+AP+VRVA+ E GL PG Sbjct: 195 CAAHCPVAAI---YEKDQTKEVEAAIDDPNT-YVTVQMAPSVRVALGEYFGLKPGDNITG 250 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ +R +GFD +FDT FGA Sbjct: 251 KIYAAMRLMGFDAIFDTNFGA 271 [81][TOP] >UniRef100_C0CHL9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CHL9_9FIRM Length = 581 Score = 57.0 bits (136), Expect = 8e-07 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + Q LA +A P+ K+V VQ AP+VR A+ E G G Sbjct: 198 CIAVCPTGALQEKDYTDQVLAAIADPE-----KYVVVQTAPSVRAALGEEFGYPIGTDVE 252 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRR+GFD+VFDT F A Sbjct: 253 GKMAAALRRMGFDKVFDTDFSA 274 [82][TOP] >UniRef100_A7B649 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B649_RUMGN Length = 531 Score = 57.0 bits (136), Expect = 8e-07 Identities = 35/83 (42%), Positives = 46/83 (55%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A + + ++ V ALA D TR V Q+APAVRVAI + G+ G T Sbjct: 150 VVCPTGAISIKQDIAPVWTALA------DKDTR--VIAQIAPAVRVAIGDKFGIPKGENT 201 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 +L LR +GFDE++DT FGA Sbjct: 202 LGRLVAALRMIGFDEIYDTNFGA 224 [83][TOP] >UniRef100_A8F6X3 Hydrogenase, Fe-only n=1 Tax=Thermotoga lettingae TMO RepID=A8F6X3_THELT Length = 583 Score = 56.6 bits (135), Expect = 1e-06 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C+A P A S+V++ L EL + K + VQ APA RVA+ E GL PG+ + Sbjct: 197 CSAFCPVGAITENSNVRKVLEELERHD-----KVLVVQTAPATRVALGEEFGLEPGSIST 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR+LGFD VFDT F A Sbjct: 252 GKMVAALRKLGFDYVFDTNFAA 273 [84][TOP] >UniRef100_Q5MIB2 Uptake hydrogenase n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=Q5MIB2_9CLOT Length = 562 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPAAEAPL-SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 CAA P + S+ ++ +L PK K V VQ+APAVRV + LG G Sbjct: 196 CAAVCPTGAIVVRSNTEKLWQDLNNPK-----KRVVVQIAPAVRVGLGTQLGEEDGRNAM 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRR+GFD++FDT GA Sbjct: 251 GKMAAALRRMGFDKIFDTSVGA 272 [85][TOP] >UniRef100_C9R991 Hydrogenase, Fe-only n=1 Tax=Ammonifex degensii KC4 RepID=C9R991_9THEO Length = 578 Score = 56.6 bits (135), Expect = 1e-06 Identities = 30/54 (55%), Positives = 33/54 (61%) Frame = +3 Query: 375 DPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 DPT KHV VQ APAV V I E GL G ++ LRRLGFD +FDT F A Sbjct: 220 DPT-KHVVVQTAPAVHVTIGEMFGLPVGTDATGKIVAALRRLGFDAIFDTNFAA 272 [86][TOP] >UniRef100_C0D6I6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6I6_9CLOT Length = 597 Score = 56.6 bits (135), Expect = 1e-06 Identities = 37/83 (44%), Positives = 44/83 (53%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A L+ V +ALA DP K V VQVAPAVR A+ E GL G Sbjct: 196 VVCPTGALQETDGLTPVWKALA-------DPG-KRVIVQVAPAVRAALGEEFGLPCGTPV 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++A L +GFD+VFDTLF A Sbjct: 248 TGKMATALHEIGFDDVFDTLFSA 270 [87][TOP] >UniRef100_B0VI66 [Fe] hydrogenase (Fe-only hydrogenase) (Ferredoxin bidirectional hydrogenase), subunit alpha n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI66_9BACT Length = 594 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/83 (39%), Positives = 46/83 (55%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A + L V +A+ DP KHV VQ AP++RV++ E G+ G+ T Sbjct: 200 VYCPTGALHERSELDAVWEAIL-------DP-EKHVIVQEAPSIRVSLGEEFGMPLGSVT 251 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 PK++ LR++GFD V DT F A Sbjct: 252 PKKMYAALRKIGFDSVMDTNFTA 274 [88][TOP] >UniRef100_B0MDF8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDF8_9FIRM Length = 515 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPAAEAPLSH-VQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P + +++ L+ PK V VQ+APAVRVA+ + G+ G Sbjct: 148 CRAVCPTGAITIKQDIERVWDALSDPKI-----RVVVQIAPAVRVAVGDKFGIPKGENVL 202 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LRR+GFDEV+DT FGA Sbjct: 203 GRLVAALRRIGFDEVYDTNFGA 224 [89][TOP] >UniRef100_A9KQG8 Hydrogenase, Fe-only n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQG8_CLOPH Length = 567 Score = 56.2 bits (134), Expect = 1e-06 Identities = 35/81 (43%), Positives = 45/81 (55%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 CAA P A V+ L ++ K +P +K V VQVAPAVRVA+ E + G Sbjct: 195 CAAVCPTAAIT---VKSDLKDVWKAIYNP-KKRVVVQVAPAVRVALGEEFHMKAGENVIG 250 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ LRRLGFD +FDT GA Sbjct: 251 KIVAALRRLGFDAIFDTSVGA 271 [90][TOP] >UniRef100_C6P9K6 Hydrogenase, Fe-only n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9K6_CLOTS Length = 581 Score = 56.2 bits (134), Expect = 1e-06 Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 9/149 (6%) Frame = +3 Query: 117 YRRRDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPA--RRLGNV 290 Y + D ++V P V R V + A V T+ AP+ R L + Sbjct: 132 YPKDDSSPSIVRDPNKCVLCRRCVATCNNV--QNVFAIGMVNRGFKTIVAPSFGRSLNDS 189 Query: 291 ACAAAAPAAEA-------PLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGL 449 C + EA H + L K K+V VQ APAVRVA+ E G+ Sbjct: 190 PCISCGQCIEACPVGAIYEKDHTKMVYDALLDEK-----KYVVVQTAPAVRVALGEEFGM 244 Query: 450 APGATTPKQLAEGLRRLGFDEVFDTLFGA 536 G+ ++ L+RLGFD+VFDT F A Sbjct: 245 PYGSIVTGKMVSALKRLGFDKVFDTDFAA 273 [91][TOP] >UniRef100_B1CC50 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC50_9FIRM Length = 581 Score = 56.2 bits (134), Expect = 1e-06 Identities = 32/83 (38%), Positives = 43/83 (51%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 + C A + + V +AL++ KHV VQ APAVR A+ E G G Sbjct: 196 INCPVGALTEKVNVDEVWEALSD--------ENKHVVVQPAPAVRAALGEEFGYEIGTDV 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++ +RRLGFD+VFDT FGA Sbjct: 248 TGKMVASMRRLGFDKVFDTDFGA 270 [92][TOP] >UniRef100_B0A714 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A714_9CLOT Length = 598 Score = 56.2 bits (134), Expect = 1e-06 Identities = 34/81 (41%), Positives = 42/81 (51%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C A + ALA+ KP V VQ+APAVRV I+E GL PGA + Sbjct: 204 CPTGALMEKDNTKEAWDALAQKEKP--------VMVQIAPAVRVGISEEFGLEPGAISTG 255 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ L+ LGFD VFDT F A Sbjct: 256 KVVAALKALGFDYVFDTNFAA 276 [93][TOP] >UniRef100_A8S5T6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5T6_9CLOT Length = 568 Score = 56.2 bits (134), Expect = 1e-06 Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 2/139 (1%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGN--VACA 299 RD ++ C + S A A R A T E G C Sbjct: 140 RDPNKCILCGDCVRMCDNVQSVNAIDFAYRGTEALVTPAFNKNIAETDCVNCGQCRAVCP 199 Query: 300 AAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQL 479 A + + + +ALA DP K V QVAPAVRVA+ + G+A G ++ Sbjct: 200 TGAISINTNIEVIWEALA-------DPNTK-VVAQVAPAVRVAVGDFFGMARGENVMGKI 251 Query: 480 AEGLRRLGFDEVFDTLFGA 536 L R+GFDEVFDT +GA Sbjct: 252 VNVLHRMGFDEVFDTAYGA 270 [94][TOP] >UniRef100_Q59262 Hydrogenase I n=1 Tax=Clostridium acetobutylicum RepID=Q59262_CLOAB Length = 582 Score = 55.8 bits (133), Expect = 2e-06 Identities = 34/83 (40%), Positives = 47/83 (56%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 +AC AA ++ + VQ+AL +DP +KHV V +AP+VR A+ E + G Sbjct: 197 IACPVAALKEKSHIEKVQEAL-------NDP-KKHVIVAMAPSVRTAMGELFKMGYGKDV 248 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 +L LR LGFD+VFD FGA Sbjct: 249 TGKLYTALRMLGFDKVFDINFGA 271 [95][TOP] >UniRef100_Q0AVN2 Ferredoxin hydrogenase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVN2_SYNWW Length = 387 Score = 55.8 bits (133), Expect = 2e-06 Identities = 31/61 (50%), Positives = 39/61 (63%) Frame = +3 Query: 354 ELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFG 533 EL K D ++K V VQ APAVRVA+ E G APG ++ LR+LGFD+V+DT F Sbjct: 69 ELKKALAD-SQKFVVVQEAPAVRVALGEEFGQAPGTNVKNKMYAALRKLGFDKVYDTEFT 127 Query: 534 A 536 A Sbjct: 128 A 128 [96][TOP] >UniRef100_B6FSQ9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSQ9_9CLOT Length = 594 Score = 55.8 bits (133), Expect = 2e-06 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A ++ + L +A P+ KHV VQ AP+VR A+ E G G Sbjct: 210 CIAVCPTGALQEKDYIDEVLEAIADPE-----KHVVVQTAPSVRAALGEEFGYPIGTDVE 264 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LRR+GFD+VFDT F A Sbjct: 265 GRMVAALRRIGFDKVFDTDFSA 286 [97][TOP] >UniRef100_B1C460 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C460_9FIRM Length = 582 Score = 55.8 bits (133), Expect = 2e-06 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = +3 Query: 333 HVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDE 512 H ++ + ++ +DPT KHV VQ APAVR ++ E G+ G ++ L+ +GFD+ Sbjct: 207 HEKEEVHDVIAALNDPT-KHVIVQTAPAVRASLGEEFGMPIGTRVTGKMVHALKLMGFDK 265 Query: 513 VFDTLFGA 536 V+DT FGA Sbjct: 266 VYDTNFGA 273 [98][TOP] >UniRef100_A9KIH2 Hydrogenase, Fe-only n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIH2_CLOPH Length = 644 Score = 55.1 bits (131), Expect(2) = 2e-06 Identities = 31/63 (49%), Positives = 38/63 (60%) Frame = +3 Query: 348 LAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTL 527 L +LA P K V Q+AP+VRVAI E G GA K++A GLR+LG D VFDT Sbjct: 279 LRDLATPN-----KIVITQMAPSVRVAIGEAFGFETGANVEKKIAAGLRKLGVDYVFDTT 333 Query: 528 FGA 536 + A Sbjct: 334 WAA 336 Score = 20.4 bits (41), Expect(2) = 2e-06 Identities = 6/14 (42%), Positives = 7/14 (50%) Frame = +2 Query: 308 TRCGGAFESCPAGA 349 T CG +CP A Sbjct: 255 THCGACLSTCPVNA 268 [99][TOP] >UniRef100_Q8RBC8 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (Chain G) n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBC8_THETN Length = 581 Score = 55.5 bits (132), Expect = 2e-06 Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 2/139 (1%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGN--VACA 299 RD ++ + C AV + A + R + ++P G + C Sbjct: 143 RDPNKCVLCRRCVAVCSEVQNVFAIGMVNRGFKTMVAPSFGRSLKDSPCISCGQCIMVCP 202 Query: 300 AAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQL 479 A + V +ALA+ +K+V Q APAVRVA+ E G+ G ++ Sbjct: 203 VGAIYEKDHTKRVYEALAD--------DKKYVVAQTAPAVRVALGEEFGMPVGTIVTGKM 254 Query: 480 AEGLRRLGFDEVFDTLFGA 536 A LRR+GFD VFDT F A Sbjct: 255 AAALRRMGFDAVFDTNFAA 273 [100][TOP] >UniRef100_C6Q018 Hydrogenase, Fe-only n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q018_9CLOT Length = 426 Score = 55.5 bits (132), Expect = 2e-06 Identities = 27/46 (58%), Positives = 32/46 (69%) Frame = +3 Query: 399 VQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 VQ APAVRV I+E GL G PK++A LR+LGFD V+DT F A Sbjct: 111 VQCAPAVRVGISEDFGLPLGTLNPKKMAAALRKLGFDRVYDTNFSA 156 [101][TOP] >UniRef100_C6IQV4 NADH:ubiquinone oxidoreductase subunit n=2 Tax=Bacteroides RepID=C6IQV4_9BACE Length = 588 Score = 55.5 bits (132), Expect = 2e-06 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + + L +LA P K V VQ APAVR A+ E GL PG Sbjct: 204 CVAVCPVGALTERDYTNRLLDDLADPD-----KIVIVQTAPAVRAALGEEFGLPPGTLVT 258 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 259 GKMVYALRELGFDYVFDTDFAA 280 [102][TOP] >UniRef100_B7R6H6 Putative hydrogenase, Fe-only subfamily n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R6H6_9THEO Length = 581 Score = 55.5 bits (132), Expect = 2e-06 Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 2/139 (1%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGN--VACA 299 RD ++ + C AV + A + R + ++P G + C Sbjct: 143 RDPNKCVLCRRCVAVCSEVQNVFAIGMVNRGFKTMVAPSFGRSLKDSPCISCGQCIMVCP 202 Query: 300 AAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQL 479 A + V +ALA+ +K+V Q APAVRVA+ E G+ G ++ Sbjct: 203 VGAIYEKDHTKRVYEALAD--------DKKYVVAQTAPAVRVALGEEFGMPVGTIVTGKM 254 Query: 480 AEGLRRLGFDEVFDTLFGA 536 A LRR+GFD VFDT F A Sbjct: 255 AAALRRMGFDAVFDTNFAA 273 [103][TOP] >UniRef100_Q0SQK1 Iron hydrogenase n=1 Tax=Clostridium perfringens SM101 RepID=Q0SQK1_CLOPS Length = 572 Score = 55.1 bits (131), Expect = 3e-06 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A + SH+++ L P+ KHV V +APAVR ++ E + G Sbjct: 196 CVAACPVDALSEKSHIERVQDALNDPE-----KHVIVAIAPAVRTSMGELFKMGYGQDVT 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 251 GKLYTALRKLGFDKVFDINFGA 272 [104][TOP] >UniRef100_A0Q130 Hydrogenase n=1 Tax=Clostridium novyi NT RepID=A0Q130_CLONN Length = 579 Score = 55.1 bits (131), Expect = 3e-06 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C P AA + H+ + L + PK KHV V +AP+VR +I E ++ G Sbjct: 202 CVNICPVAALSETPHIDRVLDAINNPK-----KHVIVAIAPSVRASIGEAFNMSYGTDVT 256 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD++FD FGA Sbjct: 257 YKLYTALRKLGFDKIFDLNFGA 278 [105][TOP] >UniRef100_C6MRT2 Hydrogenase, Fe-only n=1 Tax=Geobacter sp. M18 RepID=C6MRT2_9DELT Length = 586 Score = 55.1 bits (131), Expect = 3e-06 Identities = 35/82 (42%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A A H + LA P K V VQ APAVR A+ E LG+ G Sbjct: 202 CVAVCPVGALAEKDHTWSVIEALADPD-----KVVVVQTAPAVRAALGEDLGMEAGTLVT 256 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 257 GKMVSALRSLGFDYVFDTDFAA 278 [106][TOP] >UniRef100_C0JZZ4 NADH:ubiquinone oxidoreductase subunit n=1 Tax=uncultured bacterium URE4 RepID=C0JZZ4_9BACT Length = 590 Score = 55.1 bits (131), Expect = 3e-06 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A A + + + L ++A P CVQVAPAVRVA+ E G+ G+ Sbjct: 201 CVAVCPTGALAEVDNTGKILRDIANPN-----VKTCVQVAPAVRVALGEEFGMPAGSIVT 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A L+ +GFD VFDT + A Sbjct: 256 GKIAAALKAIGFDYVFDTDWSA 277 [107][TOP] >UniRef100_B2LWG7 Fe-hydrogenase n=1 Tax=Clostridium perfringens RepID=B2LWG7_CLOPE Length = 572 Score = 55.1 bits (131), Expect = 3e-06 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A + SH+++ L P+ KHV V +APAVR ++ E + G Sbjct: 196 CVAACPVDALSEKSHIERVQDALNDPE-----KHVIVAIAPAVRTSMGELFKMGYGQDVT 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 251 GKLYTALRKLGFDKVFDINFGA 272 [108][TOP] >UniRef100_B2C7T9 HydA n=1 Tax=Thermoanaerobacterium saccharolyticum RepID=B2C7T9_THESA Length = 584 Score = 55.1 bits (131), Expect = 3e-06 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 4/144 (2%) Frame = +3 Query: 117 YRRRDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPA--RRLGNV 290 Y++ + ++V P V R V + A V T+ AP+ R L Sbjct: 135 YQKDESSPSIVRDPNKCVLCRRCVATCNNV--QNVFAIGMVNRGFKTIVAPSFGRGLNES 192 Query: 291 ACAAAAPAAEA-PLSHV-QQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGAT 464 C + EA P+ + ++ ++ +K+V VQ APAVRVA+ E G+ G+ Sbjct: 193 PCISCGQCIEACPVGAIYEKDHTKIVYDALLDEKKYVVVQTAPAVRVALGEEFGMPYGSI 252 Query: 465 TPKQLAEGLRRLGFDEVFDTLFGA 536 ++ L+RLGFD+VFDT F A Sbjct: 253 VTGKMVSALKRLGFDKVFDTDFAA 276 [109][TOP] >UniRef100_B1ZTP2 Hydrogenase, Fe-only n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTP2_OPITP Length = 581 Score = 54.7 bits (130), Expect = 4e-06 Identities = 37/92 (40%), Positives = 47/92 (51%) Frame = +3 Query: 261 EAPARRLGNVACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAET 440 E+P + G C+A P A + + A A +D K VQ+AP+VRV + E Sbjct: 186 ESPCVKCGQ--CSAHCPTG-AIVEKDETATVWSALRDED---KICVVQIAPSVRVTVGEA 239 Query: 441 LGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 GL PG K+L LRRLGF VFDT F A Sbjct: 240 FGLPPGTNLTKKLYSALRRLGFKAVFDTNFAA 271 [110][TOP] >UniRef100_A5D4I9 Iron only hydrogenase large subunit, C-terminal domain n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4I9_PELTS Length = 530 Score = 54.7 bits (130), Expect = 4e-06 Identities = 36/84 (42%), Positives = 44/84 (52%) Frame = +3 Query: 285 NVACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGAT 464 ++AC + A + V +ALA+ KD K V VQ APA RVA+ E GL PG Sbjct: 130 SMACPSGAISERDDTKKVFEALAD----KD----KFVLVQTAPATRVALGEEFGLPPGTW 181 Query: 465 TPKQLAEGLRRLGFDEVFDTLFGA 536 Q LRRLGF+ V DT F A Sbjct: 182 VQGQQVAALRRLGFNAVLDTNFAA 205 [111][TOP] >UniRef100_C6LCG0 Periplasmic [Fe] hydrogenase, large subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCG0_9FIRM Length = 565 Score = 54.7 bits (130), Expect = 4e-06 Identities = 31/81 (38%), Positives = 43/81 (53%) Frame = +3 Query: 294 CAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPK 473 C P + H + E+ + DP + V QVAPAVRVA+ + GL G + Sbjct: 194 CRIFCPTGAISIRHNR---GEVWEALSDPDTR-VVAQVAPAVRVAVGDAFGLPKGRSVMG 249 Query: 474 QLAEGLRRLGFDEVFDTLFGA 536 ++ L R+GFDEV+DT FGA Sbjct: 250 KIVNVLHRMGFDEVYDTTFGA 270 [112][TOP] >UniRef100_C6JIN9 Hydrogenase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIN9_FUSVA Length = 644 Score = 54.7 bits (130), Expect = 4e-06 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A H + L +LA P + V VQ+APAVRVAI E G G Sbjct: 259 CVAACPVGAIFEGDHTMKLLKDLATPN-----RIVVVQIAPAVRVAIGEAFGFEAGTNVE 313 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 K+L L++LG + VFDT + A Sbjct: 314 KKLVGALKKLGVNYVFDTTWAA 335 [113][TOP] >UniRef100_C6J5D7 Hydrogenase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5D7_9BACL Length = 582 Score = 54.7 bits (130), Expect = 4e-06 Identities = 35/83 (42%), Positives = 44/83 (53%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 +AC A + V QA+A DP K V VQ APAVRVA+ E G+ G Sbjct: 197 MACPVGALQERENVGDVWQAIA-------DP-HKFVVVQTAPAVRVALGEEFGMPIGTRV 248 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++ LRRLGF++VFDT F A Sbjct: 249 TGKMVAALRRLGFNKVFDTDFAA 271 [114][TOP] >UniRef100_C4ESV4 Hydrogenase, Fe-only n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=C4ESV4_9BACT Length = 585 Score = 54.7 bits (130), Expect = 4e-06 Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 CAA P A + + + LA P K V VQ APAVR A+ E GL PG Sbjct: 200 CAAVCPTGALVERDYSWRVIEALADPD-----KVVVVQTAPAVRAALGEEFGLEPGTLVT 254 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR++GFD VFDT F A Sbjct: 255 GKMVSALRQMGFDYVFDTDFAA 276 [115][TOP] >UniRef100_B9Y878 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y878_9FIRM Length = 560 Score = 54.7 bits (130), Expect = 4e-06 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +3 Query: 291 ACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 AC A + + V +AL +DP +HV VQ APAVR A+ E GL G Sbjct: 200 ACPVGALFEKEDIHRVIEAL-------NDP-EQHVVVQTAPAVRAALGEEFGLPIGTRVT 251 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++A LRR+GFD V+DT + A Sbjct: 252 GKMAAALRRIGFDRVYDTNYAA 273 [116][TOP] >UniRef100_A5ZGY6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGY6_9BACE Length = 459 Score = 54.7 bits (130), Expect = 4e-06 Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + + L +LA P K V VQ APAVR A+ E G PG Sbjct: 75 CVAVCPVGALTERDYTNRLLDDLANPD-----KVVIVQTAPAVRAALGEEFGFPPGTVVT 129 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 130 GKMVYALRELGFDYVFDTDFAA 151 [117][TOP] >UniRef100_A8MEZ8 Hydrogenase, Fe-only n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEZ8_ALKOO Length = 578 Score = 52.8 bits (125), Expect(2) = 4e-06 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K+V VQ APA+R A+ E G+ G + ++ LRRLGFD+VFDT F A Sbjct: 220 KYVVVQTAPAIRAALGEEFGIPVGTSVTGKMVAALRRLGFDKVFDTDFTA 269 Score = 21.6 bits (44), Expect(2) = 4e-06 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = +2 Query: 308 TRCGGAFESCPAGA 349 T CG +CP GA Sbjct: 188 TNCGQCITACPVGA 201 [118][TOP] >UniRef100_A8MFZ9 Hydrogenase, Fe-only n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MFZ9_ALKOO Length = 567 Score = 54.3 bits (129), Expect = 5e-06 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V QVAPAVRVA+ E GL PG T ++ L+ +G DEV+DT F A Sbjct: 222 KRVIAQVAPAVRVALGEEFGLEPGEVTIGKIVAALKAIGIDEVYDTAFAA 271 [119][TOP] >UniRef100_C9M7X7 Periplasmic [Fe] hydrogenase, large subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7X7_9BACT Length = 577 Score = 54.3 bits (129), Expect = 5e-06 Identities = 33/83 (39%), Positives = 40/83 (48%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C H + +L DDP K V VQ+APA+R A E G+ P T Sbjct: 189 VLCGQCITHCPVGALHERDDTQKLMDAIDDPD-KIVLVQIAPAIRTAWCEEFGMKPEEAT 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 +LA LR +GFD VFDT F A Sbjct: 248 VNRLASALRIIGFDYVFDTNFSA 270 [120][TOP] >UniRef100_C8W2W7 Hydrogenase, Fe-only n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2W7_9FIRM Length = 513 Score = 54.3 bits (129), Expect = 5e-06 Identities = 29/50 (58%), Positives = 31/50 (62%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APA RVA+ E GL PGA Q LRRLGFD +FDT F A Sbjct: 146 KVVVVQTAPATRVALGEEFGLEPGAWVMGQQVAALRRLGFDVIFDTNFTA 195 [121][TOP] >UniRef100_C7N6Y7 Hydrogenase, Fe-only n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6Y7_SLAHD Length = 569 Score = 54.3 bits (129), Expect = 5e-06 Identities = 28/46 (60%), Positives = 32/46 (69%) Frame = +3 Query: 399 VQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 VQVAPAVR A E +GL TPK++A LR LGFD+VFDT F A Sbjct: 222 VQVAPAVRAAWGEGVGLTREQATPKRMASALRALGFDKVFDTDFAA 267 [122][TOP] >UniRef100_C7IQ31 Hydrogenase, Fe-only n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IQ31_THEET Length = 581 Score = 54.3 bits (129), Expect = 5e-06 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A + V +ALA+ +K+V Q APAVRVA+ E G+ G+ Sbjct: 199 VVCPVGAIYEKDHTKRVYEALAD--------EKKYVVAQTAPAVRVALGEEFGMPIGSIV 250 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++ LRR+GFD +FDT F A Sbjct: 251 TGKMVAALRRMGFDAIFDTNFAA 273 [123][TOP] >UniRef100_C4FMS8 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FMS8_9FIRM Length = 492 Score = 54.3 bits (129), Expect = 5e-06 Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPA----AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 CAAA P A++ L V+ ALA DP K V +Q APAVRVAI E G PG Sbjct: 80 CAAACPFDSMHAKSELEKVKAALA-------DP-EKIVVIQTAPAVRVAIGEGFGYEPGT 131 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LG D V DT FGA Sbjct: 132 FLEGKMVGALRALGADYVVDTNFGA 156 [124][TOP] >UniRef100_C3QPZ8 NADH:ubiquinone oxidoreductase subunit n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QPZ8_9BACE Length = 588 Score = 54.3 bits (129), Expect = 5e-06 Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + + L +LA P K V VQ APAVR A+ E G PG Sbjct: 204 CVAVCPVGALTERDYTNRLLDDLANPD-----KVVIVQTAPAVRAALGEEFGFPPGTLVT 258 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 259 GKMVYALRELGFDYVFDTDFAA 280 [125][TOP] >UniRef100_C3QBB0 NADH:ubiquinone oxidoreductase subunit n=1 Tax=Bacteroides sp. D1 RepID=C3QBB0_9BACE Length = 588 Score = 54.3 bits (129), Expect = 5e-06 Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + + L +LA P K V VQ APAVR A+ E G PG Sbjct: 204 CVAVCPVGALTERDYTNRLLDDLANPD-----KVVIVQTAPAVRAALGEEFGFPPGTLVT 258 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 259 GKMVYALRELGFDYVFDTDFAA 280 [126][TOP] >UniRef100_C0V367 Hydrogenase, Fe-only n=1 Tax=Veillonella parvula DSM 2008 RepID=C0V367_9FIRM Length = 476 Score = 54.3 bits (129), Expect = 5e-06 Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPA----AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 CAAA P A++ L V+ ALA DP K V +Q APAVRVAI E G PG Sbjct: 64 CAAACPFDSMHAKSELEKVKAALA-------DP-EKIVVIQTAPAVRVAIGEGFGYEPGT 115 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LG D V DT FGA Sbjct: 116 FLEGKMVGALRALGADYVVDTNFGA 140 [127][TOP] >UniRef100_Q3A458 NAD-reducing iron-only hydrogenase large subunit n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A458_PELCD Length = 585 Score = 53.9 bits (128), Expect = 7e-06 Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 CAA P A H + LA P+ K VQ APAVR A+ E G+ G + Sbjct: 201 CAAVCPVGALVERDHTWDVVTALADPE-----KVTVVQTAPAVRAALGEEFGIEAGTSVT 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR++GFD VFDT F A Sbjct: 256 GKMVAALRQIGFDHVFDTDFAA 277 [128][TOP] >UniRef100_A7HJM0 Hydrogenase, Fe-only n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJM0_FERNB Length = 586 Score = 53.9 bits (128), Expect = 7e-06 Identities = 28/56 (50%), Positives = 36/56 (64%) Frame = +3 Query: 369 KDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K +P + +V Q AP+VRVAI E G+ PG + ++ LRRLGFD VFDT F A Sbjct: 219 KKEPGKVYVA-QTAPSVRVAIGEEFGVEPGTVSTGKMVAALRRLGFDYVFDTNFAA 273 [129][TOP] >UniRef100_Q6F4C7 Hydrogenase n=1 Tax=Clostridium paraputrificum RepID=Q6F4C7_9CLOT Length = 582 Score = 53.9 bits (128), Expect = 7e-06 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A + +H+ + L P+ KHV V +APAVR A+ E + G Sbjct: 196 CVAACPVGALSEKTHIDRVKEALEDPE-----KHVIVAMAPAVRTAMGELFNMGYGVDVT 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR LGFD +FD FGA Sbjct: 251 GKLYTALRELGFDRIFDINFGA 272 [130][TOP] >UniRef100_C6KE35 Hydrogenase I (Fragment) n=1 Tax=Clostridium sp. IBUN 13A RepID=C6KE35_9CLOT Length = 385 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPAA---EAP-LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 C AA P A E P + V++AL +DP KHV V +APAVR ++ E + G Sbjct: 112 CVAACPVAALNEKPHIDRVKEAL-------EDPN-KHVIVAMAPAVRTSMGELFKMGYGV 163 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 164 DVTGKLYSSLRQLGFDKVFDINFGA 188 [131][TOP] >UniRef100_C6KE34 Hydrogenase I (Fragment) n=1 Tax=Clostridium sp. IBUN 158B RepID=C6KE34_9CLOT Length = 287 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPAA---EAP-LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 C AA P A E P + V++AL +DP KHV V +APAVR ++ E + G Sbjct: 112 CVAACPVAALNEKPHIDRVKEAL-------EDPN-KHVIVAMAPAVRTSMGELFKMGYGV 163 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 164 DVTGKLYSSLRQLGFDKVFDINFGA 188 [132][TOP] >UniRef100_C6J9E9 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9E9_9FIRM Length = 562 Score = 53.9 bits (128), Expect = 7e-06 Identities = 32/83 (38%), Positives = 44/83 (53%) Frame = +3 Query: 288 VACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATT 467 V C A A + + +ALA DP + V Q+APAVRVA+ + GL G + Sbjct: 196 VYCPTGAIAIKTHMDEAWEALA-------DPNIR-VVAQIAPAVRVAVGDHYGLTKGKSV 247 Query: 468 PKQLAEGLRRLGFDEVFDTLFGA 536 ++ L R+GFDEV+DT F A Sbjct: 248 MGKIVNALHRMGFDEVYDTSFSA 270 [133][TOP] >UniRef100_C2CF68 Ferredoxin hydrogenase n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CF68_9FIRM Length = 577 Score = 53.9 bits (128), Expect = 7e-06 Identities = 26/50 (52%), Positives = 33/50 (66%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 KHV VQVAPAVRV++AE G+ G ++ L+ LGF +VFDT F A Sbjct: 226 KHVIVQVAPAVRVSLAEMFGMEVGLNVEGKIVRALKTLGFSKVFDTNFAA 275 [134][TOP] >UniRef100_B5CKT0 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKT0_9FIRM Length = 566 Score = 53.9 bits (128), Expect = 7e-06 Identities = 26/48 (54%), Positives = 32/48 (66%) Frame = +3 Query: 393 VCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 V Q+APAVRVAI + G+ G T +L LR +GFDEV+DT FGA Sbjct: 223 VVAQIAPAVRVAIGDKFGIPKGENTLGRLVAALRHMGFDEVYDTNFGA 270 [135][TOP] >UniRef100_A3DCI9 Hydrogenase, Fe-only n=3 Tax=Clostridium thermocellum RepID=A3DCI9_CLOTH Length = 566 Score = 53.9 bits (128), Expect = 7e-06 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 1/138 (0%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPR-APLAASTVRVALATLEAPARRLGNVACAA 302 RD+ ++ C V + A A R + + STV + P V C Sbjct: 143 RDRSKCILCGDCVRVCNEVQNVGAIDFAYRGSKMTISTV------FDKPIFESNCVGCGQ 196 Query: 303 AAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLA 482 A A V+ ++ K D + V VQ+APAVRVA+ + LGL G ++ Sbjct: 197 CALACPTGAIVVKDDTQKVWKEIYDKNTR-VSVQIAPAVRVALGKELGLNDGENAIGKIV 255 Query: 483 EGLRRLGFDEVFDTLFGA 536 LRR+GFD++FDT GA Sbjct: 256 AALRRMGFDDIFDTSTGA 273 [136][TOP] >UniRef100_B0MU24 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU24_9BACT Length = 589 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P +A + S++++ + LA P K V VQ APAVRVA+ + GL + T Sbjct: 201 CVAVCPTSALSENSNIREVMQALADPG-----KTVVVQTAPAVRVALGQDFGLEGRSVTG 255 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 K + LRRLGFD VFDT F A Sbjct: 256 K-MTTALRRLGFDYVFDTDFAA 276 [137][TOP] >UniRef100_B0FYQ6 [FeFe] hydrogenase n=1 Tax=Clostridium butyricum RepID=B0FYQ6_CLOBU Length = 574 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPAA---EAP-LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 C AA P A E P + V++AL +DP KHV V +APAVR ++ E + G Sbjct: 196 CVAACPVAALNEKPHIDRVKEAL-------EDPN-KHVIVAMAPAVRTSMGELFKMGYGV 247 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 248 DVTGKLYSSLRQLGFDKVFDINFGA 272 [138][TOP] >UniRef100_B0ABH9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABH9_9CLOT Length = 598 Score = 53.9 bits (128), Expect = 7e-06 Identities = 27/50 (54%), Positives = 33/50 (66%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ+APAVRV I+E GL PG + ++ L+ LGFD VFDT F A Sbjct: 227 KPVMVQIAPAVRVGISEEFGLKPGTISTGKVVAALKALGFDYVFDTNFAA 276 [139][TOP] >UniRef100_A7M653 Putative uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M653_BACOV Length = 588 Score = 53.9 bits (128), Expect = 7e-06 Identities = 34/82 (41%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A + L +LA P K V VQ APAVR A+ E G PG Sbjct: 204 CVAVCPVGALTERDYTNHLLDDLANPD-----KVVIVQTAPAVRAALGEEFGFPPGTLVT 258 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 259 GKMVYALRELGFDYVFDTDFAA 280 [140][TOP] >UniRef100_A6N8U3 FeFe hydrogenase n=3 Tax=Clostridium butyricum RepID=A6N8U3_CLOBU Length = 574 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPAA---EAP-LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 C AA P A E P + V++AL +DP KHV V +APAVR ++ E + G Sbjct: 196 CVAACPVAALNEKPHIDRVKEAL-------EDPN-KHVIVAMAPAVRTSMGELFKMGYGV 247 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 248 DVTGKLYSSLRQLGFDKVFDINFGA 272 [141][TOP] >UniRef100_A4L724 Hydrogenase n=1 Tax=Clostridium butyricum RepID=A4L724_CLOBU Length = 574 Score = 53.9 bits (128), Expect = 7e-06 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Frame = +3 Query: 294 CAAAAPAA---EAP-LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGA 461 C AA P A E P + V++AL +DP KHV V +APAVR ++ E + G Sbjct: 196 CVAACPVAALNEKPHIDRVKEAL-------EDPN-KHVIVAMAPAVRTSMGELFKMGYGV 247 Query: 462 TTPKQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD+VFD FGA Sbjct: 248 DVTGKLYSSLRQLGFDKVFDINFGA 272 [142][TOP] >UniRef100_UPI0001794ADE hypothetical protein CLOSPO_03148 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794ADE Length = 577 Score = 53.5 bits (127), Expect = 9e-06 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APA+R A+ E GL PG T ++ LR+LGF +VFDT F A Sbjct: 229 KVVIVQTAPAIRAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAA 278 [143][TOP] >UniRef100_Q0AY73 Iron hydrogenase, small subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY73_SYNWW Length = 574 Score = 53.5 bits (127), Expect = 9e-06 Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 1/138 (0%) Frame = +3 Query: 126 RDKMSALVLKPCAAVSIRGSSCRARQVAPRAPLAASTVRVALATLEAPARRLGNVACAAA 305 RD+ ++ + C S A + R + + A +++P G C A Sbjct: 141 RDQDKCILCRRCIEACSVIQSVNALGMEGRGYNSMVVPTLGKALIDSPCVMCGQ--CIHA 198 Query: 306 APA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLA 482 P A + + LA +A P K V Q+APAVRVAIAE +G+ G Sbjct: 199 CPVGAIGEREQIDEFLAAVANPD-----KVVITQIAPAVRVAIAEEIGMMTGELPMGTFV 253 Query: 483 EGLRRLGFDEVFDTLFGA 536 +GLR++GFD V T F A Sbjct: 254 QGLRQIGFDHVLHTNFTA 271 [144][TOP] >UniRef100_B7IE12 Hydrogenase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE12_THEAB Length = 583 Score = 53.5 bits (127), Expect = 9e-06 Identities = 29/92 (31%), Positives = 44/92 (47%) Frame = +3 Query: 261 EAPARRLGNVACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAET 440 + P ++C A + ++ K D K + Q AP+VRVAI E Sbjct: 180 DMPVYETNCISCGQCAYLCPVGAIYETPDWRKVLKILDKKDNKILVAQTAPSVRVAIGEE 239 Query: 441 LGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 G+ PG+ + ++ +R+LGFD VFDT F A Sbjct: 240 FGMEPGSVSTGKMVAAIRKLGFDYVFDTNFAA 271 [145][TOP] >UniRef100_B1KT12 Iron hydrogenase 1 n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1KT12_CLOBM Length = 577 Score = 53.5 bits (127), Expect = 9e-06 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APA+R A+ E GL PG T ++ LR+LGF +VFDT F A Sbjct: 229 KIVIVQTAPAIRAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAA 278 [146][TOP] >UniRef100_B1IMB5 Iron hydrogenase 1 n=1 Tax=Clostridium botulinum B1 str. Okra RepID=B1IMB5_CLOBK Length = 577 Score = 53.5 bits (127), Expect = 9e-06 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APA+R A+ E GL PG T ++ LR+LGF +VFDT F A Sbjct: 229 KVVIVQTAPAIRAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAA 278 [147][TOP] >UniRef100_A6LZY3 Hydrogenase, Fe-only n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZY3_CLOB8 Length = 461 Score = 53.5 bits (127), Expect = 9e-06 Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = +3 Query: 399 VQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 VQ APAVRV++ E GL G+ T ++A LRRLGF+ V+DT FGA Sbjct: 109 VQCAPAVRVSLGEEFGLKAGSLTAGKMAAALRRLGFNRVYDTNFGA 154 [148][TOP] >UniRef100_A5I2X0 Iron hydrogenase 1 n=2 Tax=Clostridium botulinum A RepID=A5I2X0_CLOBH Length = 577 Score = 53.5 bits (127), Expect = 9e-06 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 387 KHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 K V VQ APA+R A+ E GL PG T ++ LR+LGF +VFDT F A Sbjct: 229 KIVIVQTAPAIRAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAA 278 [149][TOP] >UniRef100_Q0TMV5 Iron hydrogenase n=2 Tax=Clostridium perfringens RepID=Q0TMV5_CLOP1 Length = 572 Score = 53.5 bits (127), Expect = 9e-06 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A + SH+++ L P+ KHV V +APAVR ++ E + G Sbjct: 196 CIAACPVDALSEKSHIERVQEALNDPE-----KHVIVAMAPAVRTSMGELFKMGYGQDVT 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR LGFD+VFD FGA Sbjct: 251 GKLYTALRELGFDKVFDINFGA 272 [150][TOP] >UniRef100_C6JN92 NADH:ubiquinone oxidoreductase subunit n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JN92_FUSVA Length = 585 Score = 53.5 bits (127), Expect = 9e-06 Identities = 29/61 (47%), Positives = 40/61 (65%) Frame = +3 Query: 354 ELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFG 533 +L++ +P +K V VQVAPAVRVAI E G+ G + ++ L++LGFD VFDT F Sbjct: 218 KLSRDLINPNKK-VIVQVAPAVRVAIGELFGIPVGTDSTGKMVTALKKLGFDGVFDTNFA 276 Query: 534 A 536 A Sbjct: 277 A 277 [151][TOP] >UniRef100_B3CBD8 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CBD8_9BACE Length = 588 Score = 53.5 bits (127), Expect = 9e-06 Identities = 34/82 (41%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C A P A H + L +L P K V VQ APAVR A+ E GL G Sbjct: 204 CVAVCPVGALTERDHTNRLLLDLENPD-----KVVIVQTAPAVRAALGEEFGLPAGTLVT 258 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 ++ LR LGFD VFDT F A Sbjct: 259 GKMVYALRELGFDYVFDTDFAA 280 [152][TOP] >UniRef100_B1BMN7 Iron hydrogenase n=3 Tax=Clostridium perfringens RepID=B1BMN7_CLOPE Length = 572 Score = 53.5 bits (127), Expect = 9e-06 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAPA-AEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C AA P A + SH+++ L P+ KHV V +APAVR ++ E + G Sbjct: 196 CIAACPVDALSEKSHIERVQEALNDPE-----KHVIVAMAPAVRTSMGELFKMGYGQDVT 250 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR LGFD+VFD FGA Sbjct: 251 GKLYTALRELGFDKVFDINFGA 272 [153][TOP] >UniRef100_B1BAX7 Hydrogenase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BAX7_CLOBO Length = 579 Score = 53.5 bits (127), Expect = 9e-06 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 294 CAAAAP-AAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTP 470 C P AA + H+ + L + PK KHV V +AP+VR +I E + G Sbjct: 202 CVNICPVAALSETPHINRVLEAIDNPK-----KHVIVAIAPSVRASIGEAFNMGYGTDVT 256 Query: 471 KQLAEGLRRLGFDEVFDTLFGA 536 +L LR+LGFD++FD FGA Sbjct: 257 GKLYTVLRQLGFDKIFDLNFGA 278 [154][TOP] >UniRef100_Q9GTP2 Putative 64kDa iron hydrogenase (Fragment) n=1 Tax=Trichomonas vaginalis RepID=Q9GTP2_TRIVA Length = 589 Score = 53.5 bits (127), Expect = 9e-06 Identities = 31/69 (44%), Positives = 42/69 (60%) Frame = +3 Query: 330 SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFD 509 S V++AL LA + +K VQVAPAVRVA++E G G T ++ L+ LGFD Sbjct: 219 SQVKEALDILA----NKGKKITVVQVAPAVRVALSEAFGYKEGTVTTGKMVSALKALGFD 274 Query: 510 EVFDTLFGA 536 V+DT +GA Sbjct: 275 LVYDTNYGA 283 [155][TOP] >UniRef100_Q8T6P9 [Fe]-hydrogenase (Fragment) n=1 Tax=Trichomonas gallinae RepID=Q8T6P9_9EUKA Length = 369 Score = 53.5 bits (127), Expect = 9e-06 Identities = 31/69 (44%), Positives = 42/69 (60%) Frame = +3 Query: 330 SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFD 509 S V++AL LA + +K VQVAPAVRVA++E G G T ++ L+ LGFD Sbjct: 155 SQVKEALDILA----NKGKKVTVVQVAPAVRVALSEAFGYKEGTVTTGKMVSALKALGFD 210 Query: 510 EVFDTLFGA 536 V+DT +GA Sbjct: 211 LVYDTNYGA 219 [156][TOP] >UniRef100_Q8T5G1 Iron hydrogenase HDGL2 (Fragment) n=1 Tax=Trichomonas vaginalis RepID=Q8T5G1_TRIVA Length = 369 Score = 53.5 bits (127), Expect = 9e-06 Identities = 31/69 (44%), Positives = 42/69 (60%) Frame = +3 Query: 330 SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFD 509 S V++AL LA + +K VQVAPAVRVA++E G G T ++ L+ LGFD Sbjct: 155 SQVKEALDILA----NKGKKITVVQVAPAVRVALSEAFGYKEGTVTTGKMVSALKALGFD 210 Query: 510 EVFDTLFGA 536 V+DT +GA Sbjct: 211 LVYDTNYGA 219 [157][TOP] >UniRef100_A2FCW4 64kDa iron hydrogenase, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2FCW4_TRIVA Length = 591 Score = 53.5 bits (127), Expect = 9e-06 Identities = 31/69 (44%), Positives = 42/69 (60%) Frame = +3 Query: 330 SHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQLAEGLRRLGFD 509 S V++AL LA + +K VQVAPAVRVA++E G G T ++ L+ LGFD Sbjct: 221 SQVKEALDILA----NKGKKITVVQVAPAVRVALSEAFGYKEGTVTTGKMVSALKALGFD 276 Query: 510 EVFDTLFGA 536 V+DT +GA Sbjct: 277 LVYDTNYGA 285 [158][TOP] >UniRef100_A2D900 TvhydB protein, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2D900_TRIVA Length = 470 Score = 53.5 bits (127), Expect = 9e-06 Identities = 35/100 (35%), Positives = 49/100 (49%) Frame = +3 Query: 237 VRVALATLEAPARRLGNVACAAAAPAAEAPLSHVQQALAELAKPKDDPTRKHVCVQVAPA 416 V+ L A +G C P + + + K K D R VC Q+APA Sbjct: 62 VQTVTGKLLAETNCIGCGQCTLVCPTQAIHEKDALKQMNNIFKNKGD--RILVC-QIAPA 118 Query: 417 VRVAIAETLGLAPGATTPKQLAEGLRRLGFDEVFDTLFGA 536 +R+ +AE LG+ G + ++ L+RLGFD VFDT FGA Sbjct: 119 IRINMAEGLGVPVGTVSTGKVVTALKRLGFDYVFDTNFGA 158