AV395641 ( CL46d01_r )

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[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8I9W8_CHLRE
          Length = 270

 Score =  319 bits (818), Expect(2) = 1e-88
 Identities = 161/161 (100%), Positives = 161/161 (100%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGF 215
           GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGF
Sbjct: 16  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGF 75

Query: 216 ALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPPPMGTPYGLRPADSL 395
           ALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPPPMGTPYGLRPADSL
Sbjct: 76  ALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPPPMGTPYGLRPADSL 135

Query: 396 QHVYPLMTTSLPTQSVLTLPSDAALAQQGTTMSLVNAQLQQ 518
           QHVYPLMTTSLPTQSVLTLPSDAALAQQGTTMSLVNAQLQQ
Sbjct: 136 QHVYPLMTTSLPTQSVLTLPSDAALAQQGTTMSLVNAQLQQ 176

 Score = 31.2 bits (69), Expect(2) = 1e-88
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 1  QNSVMECPRSMVG 39
          QNSVMECPRSMVG
Sbjct: 4  QNSVMECPRSMVG 16

[2][TOP]
>UniRef100_A8JED3 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JED3_CHLRE
          Length = 206

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 57/132 (43%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = +3

Query: 48  GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGFALLR 227
           G+ G+T+KALQT+TGA IQIDQ                      + DI+RG+FKGFALLR
Sbjct: 35  GRDGDTIKALQTFTGALIQIDQ----------------------VHDIVRGTFKGFALLR 72

Query: 228 QATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLY----DDRTAPPPMGTPYGLRPADSL 395
           QAT  +N     P     +PVYAPGYGL+P SQLY    D  +A  PM      +P   +
Sbjct: 73  QATGHSNRG---PQPLSNKPVYAPGYGLVPPSQLYGGTGDIASAQVPM------QPLQPM 123

Query: 396 QHVYPLMTTSLP 431
           Q    + TT LP
Sbjct: 124 Q----MSTTPLP 131

[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
          Length = 1640

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
 Frame = +3

Query: 36   GRVIGKSGETVKALQTYTGATIQIDQSV-DPTRVSISGAAYSVNLAVSIITDIIRGSFKG 212
            GRVIGK GET+K LQ ++GA +Q+DQ+V DP  V I+GA  SV  A   +  II G    
Sbjct: 1465 GRVIGKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAEAVAAIIAGGPTA 1524

Query: 213  FALLRQ-------------ATRPANGRNGYP-AFTEPRPVYAPGYGLIP 317
               + Q             A     G  GYP A       Y PGYG  P
Sbjct: 1525 QYAVPQAGAGYGGGYGGYGAIGGYGGYGGYPQAAAAAYAGYYPGYGAYP 1573

 Score = 21.9 bits (45), Expect(2) = 1e-08
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = +1

Query: 1    QNSVMECPRSMVG 39
            ++ ++ECP++MVG
Sbjct: 1453 ESRIVECPKNMVG 1465

[4][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8T9_9CHLO
          Length = 156

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDII 194
           GRVIG+ GET+K LQ+ TGA IQIDQSV P  ++I+G  Y V+ A   + D+I
Sbjct: 104 GRVIGRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVDVI 156

 Score = 20.8 bits (42), Expect(2) = 2e-08
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 10  VMECPRSMVG 39
           ++ECP+ MVG
Sbjct: 95  IVECPKDMVG 104

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
 Frame = +3

Query: 21  PPLHGGRVIGKSGETVKALQTYTGATIQIDQSVD---PTRVSISGAAYSVNLAVSIITDI 191
           PP   GRVIGK GET+K LQ  +GA I IDQ+     P ++SISG A  V++A  ++ D+
Sbjct: 17  PPGLVGRVIGKGGETIKGLQAQSGAHITIDQNYPDGAPRKISISGPAGCVDIASKLVEDL 76

Query: 192 IRG 200
           ++G
Sbjct: 77  LKG 79

[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
           Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
          Length = 511

 Score = 58.2 bits (139), Expect(2) = 8e-08
 Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIR--GSFK 209
           GR+IGK GET+K LQ    A+IQIDQS  P +V+I+G ++++  A   I D+IR  G   
Sbjct: 298 GRIIGKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIEDLIRSTGPPP 357

Query: 210 GFALLRQATRPANGRNGYPAFTEPRPVYAPGYGLIPASQLYDDRTAPP--------PMGT 365
           G   +   +RP  G      +      Y  GYG   A   Y      P        P G 
Sbjct: 358 GGMGMGGGSRPPYGAPYGQQYPGGAGGYGGGYGGYGAPGGYGAPGGYPGYGGYGGYPGGA 417

Query: 366 PYG 374
           PYG
Sbjct: 418 PYG 420

 Score = 21.9 bits (45), Expect(2) = 8e-08
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 10  VMECPRSMVG 39
           V+ECP++MVG
Sbjct: 289 VLECPKTMVG 298

[6][TOP]
>UniRef100_C1N3L0 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3L0_9CHLO
          Length = 204

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +3

Query: 39  RVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRG 200
           +VIG+ GET+K LQ  +GA +QIDQ+ DP +V +SG  Y V  A + + +I+ G
Sbjct: 5   KVIGRGGETIKGLQASSGARVQIDQTTDPCKVVVSGNPYCVEAAYAQVANIVAG 58

[7][TOP]
>UniRef100_A4S9R3 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S9R3_OSTLU
          Length = 249

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSV---DPTRVSISGAAYSVNLAVSIITDIIRGSF 206
           GR+IG+ GET+K LQ  +GA + IDQ+V   +P +++I+GAA  V++A  ++ +++ G+ 
Sbjct: 3   GRIIGRGGETIKGLQASSGAHVAIDQNVGEGEPRKITIAGAAACVDVASELVENLLLGTG 62

Query: 207 KGFALL 224
            G  LL
Sbjct: 63  VGGGLL 68

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 29/91 (31%), Positives = 48/91 (52%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGF 215
           G++IG+ GET++ +QT TGA +QIDQ+  P +V ++G+   V     ++ +II G     
Sbjct: 86  GKLIGRGGETIRGIQTATGARMQIDQTRQPCQVILAGSEACVEAGAQVVQEIIDGG--ST 143

Query: 216 ALLRQATRPANGRNGYPAFTEPRPVYAPGYG 308
           A+  +  R   G  G     +     A G+G
Sbjct: 144 AVFNEIARGGQGFGGQGFGGQGYGAQAAGWG 174

[8][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
          Length = 393

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQS---VDPTRVSISGAAYSVNLAVSIITDIIRGS 203
           GR+IG+ GET+K+LQ  +GA + IDQS    +P RV+ISG   SV+ A  ++ +++ G+
Sbjct: 143 GRIIGRGGETIKSLQATSGAHVAIDQSGADGEPKRVTISGTRKSVDAASELVENLLLGT 201

 Score = 21.2 bits (43), Expect(2) = 6e-06
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 13  MECPRSMVG 39
           +ECP+SMVG
Sbjct: 135 LECPQSMVG 143

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 28/90 (31%), Positives = 48/90 (53%)
 Frame = +3

Query: 36  GRVIGKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSFKGF 215
           G++IG+ GET++ +Q  TGA +QIDQ+  P  V ++GA   V+    ++ +I+ G     
Sbjct: 226 GKIIGRGGETIRGIQAATGARLQIDQTRQPCVVMMAGAEACVDACTQVVNEILEGG--ST 283

Query: 216 ALLRQATRPANGRNGYPAFTEPRPVYAPGY 305
           A+  +  R   G  GY +     P  + G+
Sbjct: 284 AVFNEIARGGQG-FGYASSANAAPYASAGW 312