AV394342 ( CL21f03_r )

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[1][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IY03_CHLRE
          Length = 1161

 Score =  330 bits (847), Expect = 3e-89
 Identities = 169/169 (100%), Positives = 169/169 (100%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR
Sbjct: 315 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 374

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS
Sbjct: 375 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 434

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR
Sbjct: 435 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 483

[2][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
           RepID=C1FIF0_9CHLO
          Length = 1159

 Score =  266 bits (681), Expect = 5e-70
 Identities = 129/169 (76%), Positives = 152/169 (89%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +SKVDEARD+LA VVL HVPVP Y F QK  YVA+M+RR+L+A++DP  +DD+DYYGNKR
Sbjct: 325 RSKVDEARDILAGVVLAHVPVPAYDFRQKCVYVAIMIRRILHAMVDPTQVDDKDYYGNKR 384

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S
Sbjct: 385 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 444

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 445 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493

[3][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4RS40_OSTLU
          Length = 1146

 Score =  263 bits (672), Expect = 5e-69
 Identities = 129/169 (76%), Positives = 151/169 (89%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +S+VDEARD+LA VVL HVPV  Y F QK AY+++MVRR+L A+LDP  IDD+DYYGNKR
Sbjct: 311 RSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQIDDKDYYGNKR 370

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S
Sbjct: 371 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 430

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 431 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 479

[4][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
           RepID=Q01FH9_OSTTA
          Length = 2569

 Score =  262 bits (669), Expect = 1e-68
 Identities = 127/169 (75%), Positives = 151/169 (89%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +S++DEARD+LA VVL HVPV  Y F QK AY+++MVRR+L A+LDP  +DD+DYYGNKR
Sbjct: 341 RSRIDEARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRILNALLDPTQVDDKDYYGNKR 400

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S
Sbjct: 401 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 460

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 461 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 509

[5][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N4K3_9CHLO
          Length = 1197

 Score =  257 bits (657), Expect = 3e-67
 Identities = 127/169 (75%), Positives = 150/169 (88%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +++VDEARD+LA VVL HVPV  Y F  K AYVAVM+RR+L+A++D   IDD+DYYGNKR
Sbjct: 363 RNRVDEARDILAGVVLAHVPVVAYDFRGKCAYVAVMIRRILHAMIDRTQIDDKDYYGNKR 422

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S
Sbjct: 423 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 482

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 483 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 531

[6][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9RNX6_PHYPA
          Length = 1135

 Score =  235 bits (599), Expect = 1e-60
 Identities = 115/169 (68%), Positives = 143/169 (84%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K +VDEARD+LA VVL HVPV ++ F  K  Y+AV++R+ML A+L+   +DD DY GNKR
Sbjct: 288 KVRVDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKR 347

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFKR+N+++K+  DA LSKANR+TQFD+ K IR DT+T GLE A+S
Sbjct: 348 LELAGQLLSLLFEDLFKRMNAELKKSMDATLSKANRSTQFDIIKLIRPDTLTNGLEHAIS 407

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RF+M+RKGVTQV+SRLSFIAA+G MTR++SQFEKTRKVSGPR
Sbjct: 408 SGNWAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPR 456

[7][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8BQM2_THAPS
          Length = 1108

 Score =  225 bits (574), Expect = 1e-57
 Identities = 111/168 (66%), Positives = 134/168 (79%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S  DEARDV A+VVL HVPV  + F  K  Y+  +VRR++   L  + +DD+DYYGNKRL
Sbjct: 269 SPEDEARDVFANVVLSHVPVVNFDFHAKTIYIGHIVRRLVMVQLGKSSLDDKDYYGNKRL 328

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
           ELAG LLSLLFEDLFK  N+D+K+Q D VLSK NRA  FDV K IR D+I YG+ SA+SS
Sbjct: 329 ELAGSLLSLLFEDLFKHFNTDLKKQTDMVLSKPNRAQAFDVIKTIRPDSIAYGMMSAISS 388

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW+++RFRM+R GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 389 GNWVLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 436

[8][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FVD4_PHATR
          Length = 1211

 Score =  221 bits (563), Expect = 2e-56
 Identities = 110/168 (65%), Positives = 134/168 (79%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S  DEAR+VLA+VVL HVPV  + F +K  Y+  +VRR+L   L    +DD+DYYGNKRL
Sbjct: 351 SPEDEAREVLANVVLSHVPVTHFDFREKALYIGHIVRRVLLVHLGKMPLDDKDYYGNKRL 410

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
           ELAG LLSLLFEDLFK  N D+KRQAD VLSK NR   FDV K IR DTIT G+ +A+++
Sbjct: 411 ELAGNLLSLLFEDLFKIFNKDLKRQADLVLSKPNRTQAFDVVKTIRPDTITNGMINAIAT 470

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW+++RFRM+R GVTQVLSRLS+++A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 471 GNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPR 518

[9][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
          Length = 1608

 Score =  218 bits (556), Expect = 1e-55
 Identities = 104/169 (61%), Positives = 135/169 (79%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K +EARD+LA VVL HVPV RY F  K+ Y+++M+RR++ A  D +C+DD+DYYGNKR
Sbjct: 317 KTKSEEARDILAGVVLNHVPVRRYNFRLKVIYLSLMIRRIIMASKDKSCLDDKDYYGNKR 376

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           +EL+G L+SLLFED FK+  S++K+  D  ++KANRA   D+ K IRTDTIT G   A+S
Sbjct: 377 IELSGQLISLLFEDCFKKFQSELKKSVDQAIAKANRAENLDLPKLIRTDTITNGFTHAIS 436

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SG W ++RFRMER GV+QVLSRLS+I+ MGMMTR+ SQFEKTRKV+GPR
Sbjct: 437 SGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFEKTRKVAGPR 485

[10][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
           RepID=B7Q0E7_IXOSC
          Length = 1141

 Score =  216 bits (550), Expect = 7e-55
 Identities = 109/169 (64%), Positives = 134/169 (79%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ VD+ARD+LA  VL HVPV  Y F  K  Y+A+M+RR++ A  +   IDDRDYYGNKR
Sbjct: 311 KTPVDDARDILATTVLAHVPVEHYNFRVKAMYLALMIRRVIEAQTNREMIDDRDYYGNKR 370

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFKR N+++K  AD  + K  RATQFDV K +R D IT GL S++S
Sbjct: 371 LELAGSLLSLLFEDLFKRFNTELKLVADKTIPKV-RATQFDVVKYVRQDLITNGLVSSIS 429

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+MER GVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 430 TGNWTVKRFKMERIGVTQVLTRLSYISALGMMTRVNSQFEKTRKVSGPR 478

[11][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
           RepID=Q7Q416_ANOGA
          Length = 1089

 Score =  216 bits (549), Expect = 9e-55
 Identities = 109/169 (64%), Positives = 134/169 (79%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  DEARD+LA  +L HVPVP + F  K  YVA+M+RR++ A LD + +DDRDYYGNKR
Sbjct: 297 KTTADEARDLLATTILAHVPVPSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 356

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSL+FEDLFKR N ++K  AD  + K  +A QFDV K +R   IT GLE+A+S
Sbjct: 357 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDVGKHMREALITAGLETAIS 415

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 416 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464

[12][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
           tropicalis RepID=UPI00006A103B
          Length = 1122

 Score =  214 bits (546), Expect = 2e-54
 Identities = 110/169 (65%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           KSK+DEAR++LA  +L HVPV  + F  K  Y+AVMVRR++ A      +DDRDYYGNKR
Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472

[13][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
           tropicalis RepID=UPI00004DA04E
          Length = 1136

 Score =  214 bits (546), Expect = 2e-54
 Identities = 110/169 (65%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           KSK+DEAR++LA  +L HVPV  + F  K  Y+AVMVRR++ A      +DDRDYYGNKR
Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472

[14][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=B2GUR3_XENTR
          Length = 1134

 Score =  214 bits (546), Expect = 2e-54
 Identities = 110/169 (65%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           KSK+DEAR++LA  +L HVPV  + F  K  Y+AVMVRR++ A      +DDRDYYGNKR
Sbjct: 304 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 362

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 363 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 421

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 422 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 470

[15][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
           nigroviridis RepID=Q4S7G7_TETNG
          Length = 1171

 Score =  212 bits (539), Expect = 1e-53
 Identities = 107/169 (63%), Positives = 139/169 (82%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA ++L HVPV  + F  K  Y+AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 331 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 389

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 390 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 448

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 449 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 497

[16][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
          Length = 1130

 Score =  211 bits (538), Expect = 2e-53
 Identities = 107/169 (63%), Positives = 138/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y+AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 300 KTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 358

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 359 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 417

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 418 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 466

[17][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
           pseudoobscura RepID=Q28ZV6_DROPS
          Length = 1137

 Score =  211 bits (537), Expect = 2e-53
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EARD+L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPAEEARDLLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[18][TOP]
>UniRef100_B0WCT6 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus
           RepID=B0WCT6_CULQU
          Length = 928

 Score =  211 bits (537), Expect = 2e-53
 Identities = 106/169 (62%), Positives = 133/169 (78%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  DEARD+LA  +L HVPV  + F  K  YVA+M+RR++ A LD + +DDRDYYGNKR
Sbjct: 302 KTTADEARDLLATTILAHVPVNNFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSL+FEDLFKR N ++K  AD  + K  +A QFD+ K +R   I+ GLE+A+S
Sbjct: 362 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDIVKHMRAALISTGLETAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 421 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 469

[19][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
           RepID=UPI0001560749
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[20][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B
           isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[21][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
           norvegicus RepID=UPI0000503D79
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[22][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
           kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
           n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[23][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
           RepID=UPI0000F339C2
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[24][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[25][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
          Length = 1075

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 245 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 303

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 304 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 362

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 363 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 411

[26][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
          Length = 838

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 8   KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 66

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 67  LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 125

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 126 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 174

[27][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
           RepID=RPC2_MOUSE
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[28][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
           RepID=RPC2_HUMAN
          Length = 1133

 Score =  211 bits (536), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[29][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Strongylocentrotus purpuratus
           RepID=UPI0000E487B4
          Length = 830

 Score =  210 bits (535), Expect = 4e-53
 Identities = 104/169 (61%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           KSKVDEAR++LA  +L H+PV ++ F  K  Y+A+MVRR++ A  D   +DDRDYYGNKR
Sbjct: 319 KSKVDEARELLATTILAHIPVVQFNFRAKSIYLALMVRRVIEAQGDAVKVDDRDYYGNKR 378

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L++LLFEDLFK+ NS++K+ AD  + +  RA QFD+ K +R D IT GL +A+S
Sbjct: 379 LELAGQLIALLFEDLFKKFNSELKKYADQNIPRP-RAAQFDIVKYMRQDQITNGLITAIS 437

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+MER GVTQVLSRLS+I+ +GMMTR++SQFEKTRKVSGPR
Sbjct: 438 TGNWSVKRFKMERAGVTQVLSRLSYISCLGMMTRISSQFEKTRKVSGPR 486

[30][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Ornithorhynchus anatinus
           RepID=UPI000155CB1A
          Length = 1113

 Score =  210 bits (534), Expect = 5e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 283 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 341

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 342 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 400

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 401 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 449

[31][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Monodelphis domestica
           RepID=UPI00005EAC23
          Length = 1133

 Score =  210 bits (534), Expect = 5e-53
 Identities = 107/169 (63%), Positives = 137/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[32][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA
           n=1 Tax=Tribolium castaneum RepID=UPI0000D56081
          Length = 1122

 Score =  209 bits (533), Expect = 7e-53
 Identities = 109/169 (64%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ VDEARDVLA  VL HVPV  Y F  K  Y+ VMV+R++ A  D   +DD+DYYGNKR
Sbjct: 294 KTPVDEARDVLATTVLAHVPVENYNFRMKAIYLGVMVKRVIEAQSDKKFMDDKDYYGNKR 353

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSL+FED+FKR N ++K  A+  + K  RATQFDV K +R+D IT  L  A+S
Sbjct: 354 LELAGSLLSLMFEDVFKRFNWELKSIAEKTIPKI-RATQFDVVKYMRSDLITNCLVYAIS 412

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW I+RFRMER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 413 TGNWTIKRFRMERLGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 461

[33][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4MR22_DROWI
          Length = 999

 Score =  209 bits (533), Expect = 7e-53
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EARD+L   +L HVPV  + F  K  YVA+MVRR++ A LD    DDRDYYGNKR
Sbjct: 171 KTPPEEARDLLMTTILAHVPVDNFNFQMKAIYVALMVRRVMAAELDKTLFDDRDYYGNKR 230

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 231 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 289

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEK+RKVSGPR
Sbjct: 290 SGNWTIKRFKMERGGVTQVLSRLSYISALGMMTRVNSQFEKSRKVSGPR 338

[34][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
           RepID=B4GGQ4_DROPE
          Length = 1137

 Score =  209 bits (533), Expect = 7e-53
 Identities = 106/169 (62%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[35][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3MH37_DROAN
          Length = 1137

 Score =  209 bits (533), Expect = 7e-53
 Identities = 106/169 (62%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[36][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016E4F57
          Length = 1132

 Score =  209 bits (532), Expect = 9e-53
 Identities = 106/169 (62%), Positives = 138/169 (81%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA ++L HVPV  + F  K  Y+AVMVRR++ A      +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468

[37][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4LKV4_DROVI
          Length = 1137

 Score =  209 bits (532), Expect = 9e-53
 Identities = 106/169 (62%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[38][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4J5G6_DROGR
          Length = 1137

 Score =  209 bits (532), Expect = 9e-53
 Identities = 106/169 (62%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLMSLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[39][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KPU7_DROMO
          Length = 1136

 Score =  209 bits (531), Expect = 1e-52
 Identities = 106/169 (62%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  + F  K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SL+FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[40][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B31AA
          Length = 1153

 Score =  207 bits (526), Expect = 4e-52
 Identities = 104/169 (61%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA ++L HVPV  + F  K  Y+AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 326 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 384

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LL   FEDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 385 LELAGQLLPFFFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 443

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 444 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 492

[41][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4P5Q3_DROYA
          Length = 1137

 Score =  206 bits (525), Expect = 6e-52
 Identities = 105/169 (62%), Positives = 130/169 (76%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  +    K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLS++FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[42][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
           RepID=B4QC69_DROSI
          Length = 1137

 Score =  206 bits (525), Expect = 6e-52
 Identities = 105/169 (62%), Positives = 130/169 (76%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  +    K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLS++FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[43][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3NS93_DROER
          Length = 1137

 Score =  206 bits (525), Expect = 6e-52
 Identities = 105/169 (62%), Positives = 130/169 (76%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  +    K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLS++FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[44][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
           melanogaster RepID=RPC2_DROME
          Length = 1137

 Score =  206 bits (525), Expect = 6e-52
 Identities = 105/169 (62%), Positives = 130/169 (76%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+  +EAR++L   +L HVPV  +    K  YV++MVRR++ A LD    DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLS++FEDLFKR+N ++K  AD  + K  +A QFDV K +R   IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476

[45][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Ciona intestinalis
           RepID=UPI000180BF5A
          Length = 1141

 Score =  206 bits (524), Expect = 7e-52
 Identities = 103/169 (60%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +SK DE RD L   +L H+PV  + +  K  Y+A+M+RR++   L    +DDRDYYGNKR
Sbjct: 304 QSKTDETRDWLNTTLLAHIPVTDWNYHAKAVYLALMIRRIILTQLGYLEVDDRDYYGNKR 363

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           +ELAGGL+SLLFEDLFKR NS++K+ AD  + K  RA QFDV + +R D IT  L  A+S
Sbjct: 364 MELAGGLISLLFEDLFKRFNSELKKIADLTIPKP-RAAQFDVVRHMRQDLITTSLVIAIS 422

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNWI++RF+MERKGVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 423 SGNWIVKRFKMERKGVTQVLTRLSYISALGMMTRIASQFEKTRKVSGPR 471

[46][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
           RepID=UPI000194E18E
          Length = 1280

 Score =  205 bits (521), Expect = 2e-51
 Identities = 105/169 (62%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HV V  + F  K  Y AVMVRR++ A  +   +DDRDYYGNKR
Sbjct: 450 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 508

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 509 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 567

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 568 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 616

[47][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
          Length = 1126

 Score =  205 bits (521), Expect = 2e-51
 Identities = 105/169 (62%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HV V  + F  K  Y AVMVRR++ A  +   +DDRDYYGNKR
Sbjct: 296 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 354

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 355 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 413

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 414 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 462

[48][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Gallus gallus
           RepID=UPI0000ECD29F
          Length = 1132

 Score =  205 bits (521), Expect = 2e-51
 Identities = 105/169 (62%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HV V  + F  K  Y AVMVRR++ A  +   +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 360

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD V+ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 468

[49][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3YYC3_BRAFL
          Length = 1137

 Score =  204 bits (519), Expect = 3e-51
 Identities = 102/169 (60%), Positives = 135/169 (79%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +++V+EAR+VL   +L HVPV ++ F  K  Y+A+MVRR++ A      +DDRDYYGNKR
Sbjct: 293 RTRVEEAREVLHSTILAHVPVVKFNFRLKCVYLALMVRRVVQAQAQDR-VDDRDYYGNKR 351

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LL+LLFEDLFK+ N+++K+ AD  + K  RA QFD+ K +R D IT GL +A+S
Sbjct: 352 LELAGQLLALLFEDLFKKFNAELKKIADQTIPKP-RAAQFDIVKHMRQDQITNGLVNAIS 410

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 411 TGNWTVKRFKMDRAGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 459

[50][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B53C8
          Length = 1127

 Score =  204 bits (518), Expect = 4e-51
 Identities = 105/168 (62%), Positives = 129/168 (76%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S  DE +DVLA  +L HVPV  + F  K  Y+A+MVR+++ A  D   +DDRDYYGNKRL
Sbjct: 298 SITDEMKDVLASNILSHVPVIDFNFKLKATYLALMVRKVMIAQTDGKLVDDRDYYGNKRL 357

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
           ELAG LL+L+FEDLFKR N D+K  AD  + K  +A QFD+ K +R D+IT GL  A+SS
Sbjct: 358 ELAGSLLALMFEDLFKRFNWDLKTIADKNIPKI-KAAQFDIVKHMRHDSITNGLAVAISS 416

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 417 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464

[51][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B31A9
          Length = 1132

 Score =  203 bits (516), Expect = 6e-51
 Identities = 103/169 (60%), Positives = 136/169 (80%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA ++L HVPV  + F  K  Y+AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 360

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG +  LL EDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQVSLLLCEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468

[52][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
           kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
           isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
          Length = 1134

 Score =  202 bits (514), Expect = 1e-50
 Identities = 103/168 (61%), Positives = 128/168 (76%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S  DE +D LA  +L HVPV  + F  K  Y+A+M+R+++ A  D   +DDRDYYGNKRL
Sbjct: 304 SITDEMKDALATNILSHVPVIDFNFKMKATYIALMIRKVMKAQSDGKLVDDRDYYGNKRL 363

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
           ELAG LLSL+FEDLFKR N ++K+ AD  + K  +A QFD+ K +R D IT GL  A+SS
Sbjct: 364 ELAGSLLSLMFEDLFKRFNWELKQIADKNIPKI-KAAQFDIVKHMRQDQITNGLAFAISS 422

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 423 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 470

[53][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
           yFS275 RepID=B6JW67_SCHJY
          Length = 1160

 Score =  202 bits (513), Expect = 1e-50
 Identities = 104/167 (62%), Positives = 127/167 (76%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           +EA +VLA VVL H+ V    F  K  YVA+M RR+L A++DP+ +DDRDY GNKRLELA
Sbjct: 327 EEALEVLAAVVLAHISVVNLDFRPKAVYVAMMARRVLMAMVDPSQVDDRDYVGNKRLELA 386

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367
           G LL+LLFEDLFK+ NSD+K   D VL K NR  +FD     ++  D IT G+  ALS+G
Sbjct: 387 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPNRTQEFDAYNQLSMHGDHITQGMVRALSTG 446

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER GVT VLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 447 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493

[54][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
           RepID=Q4PBR7_USTMA
          Length = 1169

 Score =  201 bits (510), Expect = 3e-50
 Identities = 104/167 (62%), Positives = 123/167 (73%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           +EA DVLA V++ HVPV R  F  K  Y+A MVRR+L A+ D   +DDRDY GNKRLELA
Sbjct: 331 EEALDVLATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMQDEKKVDDRDYVGNKRLELA 390

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESALSSG 367
           G LLSLLFEDLFK+ NSD+K   D VL K NR  +FD         D IT G   A+S+G
Sbjct: 391 GQLLSLLFEDLFKKFNSDLKMNIDKVLKKPNRTVEFDAFNQFHFNGDYITSGFVRAISTG 450

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER G+T VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 451 NWSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 497

[55][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016E4F58
          Length = 1118

 Score =  200 bits (509), Expect = 4e-50
 Identities = 102/168 (60%), Positives = 134/168 (79%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA ++L HVPV  + F  K  Y+AVMVRR++ A      +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLFEDLFK+ NS++K+ AD ++ K  RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505
           +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRK   P
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKSDTP 467

[56][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
          Length = 1165

 Score =  198 bits (503), Expect = 2e-49
 Identities = 100/167 (59%), Positives = 126/167 (75%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           +EA +VLA VVL H+ V   +F  K  Y+ +M RR+L A++DP  +DDRDY GNKRLELA
Sbjct: 332 EEALEVLAAVVLAHINVFNLEFRPKAVYIGIMARRVLMAMVDPLQVDDRDYVGNKRLELA 391

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367
           G LL+LLFEDLFK+ NSD+K   D VL K +R  +FD      + +D IT G+  ALS+G
Sbjct: 392 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPHRTQEFDAYNQLTVHSDHITQGMVRALSTG 451

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER GVT VLSRLS+I+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 452 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKVSGPR 498

[57][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
           RepID=A9V2W9_MONBE
          Length = 1097

 Score =  197 bits (502), Expect = 3e-49
 Identities = 102/169 (60%), Positives = 127/169 (75%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++K D  RD+L+ VVL HVP   + F  K  ++++MVRR++ ++ D    DDRDY GNKR
Sbjct: 284 RTKEDMGRDLLSSVVLAHVPCENFDFRAKAVFLSLMVRRVIISMGDKMT-DDRDYLGNKR 342

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG L+SLLFED FK  N+ +KRQAD  LSK NR   FD    +R D IT  L +A+S
Sbjct: 343 LELAGSLMSLLFEDTFKNFNAQLKRQADVNLSK-NRVAAFDATNFMREDIITNSLRNAIS 401

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SGNWI++RF+MER GVT VLSRLSFIA++GMMTR+TSQFEKTRKVSGPR
Sbjct: 402 SGNWILKRFKMERHGVTSVLSRLSFIASLGMMTRITSQFEKTRKVSGPR 450

[58][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
           RepID=C4M3E3_ENTHI
          Length = 1122

 Score =  195 bits (496), Expect = 1e-48
 Identities = 97/169 (57%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + K++EARDVLA++VL H+ V RY F  KI Y+A+MV  +L A  +   +DD+DYYGNKR
Sbjct: 297 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYIALMVNWILKAD-ETGELDDKDYYGNKR 355

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           +ELAG L+SLLFEDLFK+ N+D++  A+  L+K +R+  FD+ K I    IT GL  +LS
Sbjct: 356 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 415

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 416 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 464

[59][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
           RepID=A8PVW9_MALGO
          Length = 1131

 Score =  195 bits (495), Expect = 2e-48
 Identities = 99/167 (59%), Positives = 124/167 (74%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           DEA +VLA V++ HVPV +  F  K  Y+A MVRR+L  ++D + +DDRDY GNKRLELA
Sbjct: 303 DEALEVLATVIMAHVPVEQGDFRNKTMYIATMVRRVLVCMVDESKVDDRDYVGNKRLELA 362

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSG 367
           G LL+LLFEDLFK+ N D+K   D VL K NR ++FD         D IT G   A+S+G
Sbjct: 363 GQLLALLFEDLFKKFNFDLKTNIDKVLKKPNRTSEFDAYNQFFYHGDYITAGFVRAISTG 422

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 423 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469

[60][TOP]
>UniRef100_B0EDI3 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
           RepID=B0EDI3_ENTDI
          Length = 1115

 Score =  194 bits (494), Expect = 2e-48
 Identities = 97/169 (57%), Positives = 131/169 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + K++EARDVLA++VL H+ V RY F  KI Y+A+MV  +L A  +   +DD+DYYGNKR
Sbjct: 316 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYLALMVNWILKAD-ETGELDDKDYYGNKR 374

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           +ELAG L+SLLFEDLFK+ N+D++  A+  L+K +R+  FD+ K I    IT GL  +LS
Sbjct: 375 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 434

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 435 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 483

[61][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
           UF-70 RepID=A7EEL3_SCLS1
          Length = 1230

 Score =  194 bits (493), Expect = 3e-48
 Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + +A + LA++++ HVPV    F  K  Y+  MVRR+L A+++P  +DDRDY GNKR
Sbjct: 391 RNYIGDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPKLVDDRDYVGNKR 450

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
           LELAG LLSLLFEDLFK+ N+D+K   D VL K NR  +FD    +++  + IT G+  A
Sbjct: 451 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFDAYNHMQSHGNYITIGMNRA 510

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 511 ISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 561

[62][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
           RepID=B0XMI5_ASPFC
          Length = 1200

 Score =  194 bits (492), Expect = 4e-48
 Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + EA + +A V++ H+ V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA QFD     ++ ++ IT G+  A
Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533

[63][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
           RepID=A1D510_NEOFI
          Length = 1200

 Score =  194 bits (492), Expect = 4e-48
 Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + EA + +A V++ H+ V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA QFD     ++ ++ IT G+  A
Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533

[64][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
           RepID=Q0CN89_ASPTN
          Length = 1219

 Score =  193 bits (490), Expect = 6e-48
 Identities = 100/171 (58%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + +A V++ H+ V    F  K  YVA M RR+L A  DP  +DDRDY GNKR
Sbjct: 381 RTHVQEAIEAIASVIISHIEVKNMNFRPKAIYVAHMARRVLMAKNDPTLVDDRDYLGNKR 440

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA  FD     ++ T+ IT G+  A
Sbjct: 441 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWSVMSMHTNHITQGMNRA 500

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 501 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551

[65][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
            RepID=Q0V2J8_PHANO
          Length = 1443

 Score =  192 bits (489), Expect = 8e-48
 Identities = 99/166 (59%), Positives = 124/166 (74%), Gaps = 2/166 (1%)
 Frame = +2

Query: 17   EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
            EA + LA+VVL HVPV    +  K  YVA+M RR+L A+ DP  +DDRDY GNKRLEL+G
Sbjct: 622  EAIECLANVVLPHVPVEGTNYRPKALYVALMARRVLMAMQDPKLVDDRDYVGNKRLELSG 681

Query: 197  GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370
             +LSLLFED FKR N D K   D VL K NRA +FD     ++  + IT G+E A+++GN
Sbjct: 682  QMLSLLFEDHFKRFNHDFKLSIDKVLKKQNRAQEFDAFSHFSVHKNHITMGIERAIATGN 741

Query: 371  WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 742  WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 787

[66][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
           Wisconsin 54-1255 RepID=B6HTA4_PENCW
          Length = 1208

 Score =  192 bits (489), Expect = 8e-48
 Identities = 101/171 (59%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ V EA + +A V++ H+ V    F  K  YVA M RR+L A  DPA +DDRDY GNKR
Sbjct: 371 KTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKR 430

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
           LELAG +L+LLFEDLFK+   DIK   D VL+K NRA QFD      +  + IT G+  A
Sbjct: 431 LELAGQMLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRA 490

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 491 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 541

[67][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
           RepID=C0PUS9_SALSA
          Length = 814

 Score =  191 bits (486), Expect = 2e-47
 Identities = 96/152 (63%), Positives = 124/152 (81%)
 Frame = +2

Query: 53  HVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFK 232
           HVPV  + F  K  Y+AVMVRR++ A  +   +DDRDYYGNKRLELAG LLSLLFEDLFK
Sbjct: 1   HVPVKEFNFRAKCIYLAVMVRRVILAQGENK-VDDRDYYGNKRLELAGQLLSLLFEDLFK 59

Query: 233 RLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVT 412
           + NS++K+ +D ++ K  RA QFD+ K +R D IT G+ +A+S+GNW ++RF+M+R+GVT
Sbjct: 60  KFNSELKKISDQIIPK-QRAAQFDIVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVT 118

Query: 413 QVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           QVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 119 QVLSRLSFISALGMMTRISSQFEKTRKVSGPR 150

[68][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
           RepID=Q2URF4_ASPOR
          Length = 1180

 Score =  191 bits (486), Expect = 2e-47
 Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + +A V++ H+ V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 342 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 401

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA  FD     ++ ++ IT G+  A
Sbjct: 402 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 461

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 462 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 512

[69][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
           RepID=B8MYG2_ASPFN
          Length = 1218

 Score =  191 bits (486), Expect = 2e-47
 Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + +A V++ H+ V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 380 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 439

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA  FD     ++ ++ IT G+  A
Sbjct: 440 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 499

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 500 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 550

[70][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
           RepID=A1CS37_ASPCL
          Length = 1246

 Score =  190 bits (483), Expect = 4e-47
 Identities = 98/171 (57%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + EA + +A V++ H+ V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 409 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 468

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA  FD     ++  + IT G+  A
Sbjct: 469 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAWSVMSMHGNHITQGMNRA 528

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579

[71][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
           RepID=Q6CEE6_YARLI
          Length = 1169

 Score =  190 bits (482), Expect = 5e-47
 Identities = 93/166 (56%), Positives = 122/166 (73%), Gaps = 2/166 (1%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           E  + +A  ++ H+ +    F +K  Y+AVM RR++ A+ DP  IDDRDY GNKRLELAG
Sbjct: 331 EGLEAVATSIIAHISINNMDFTEKALYIAVMTRRVIMAMADPKMIDDRDYVGNKRLELAG 390

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSGN 370
            LLSLLFEDLFK+ NSD K   D +L + NRA+ FD    + T   +IT G+  A+S+GN
Sbjct: 391 QLLSLLFEDLFKKFNSDFKANIDKILKRPNRASMFDALLNLETHRGSITSGMNRAISTGN 450

Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 451 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 496

[72][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb01 RepID=C1HBD0_PARBA
          Length = 1205

 Score =  190 bits (482), Expect = 5e-47
 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 367 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 426

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LLSLLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 427 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 486

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 487 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 537

[73][TOP]
>UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb18 RepID=C1GLZ2_PARBD
          Length = 1209

 Score =  190 bits (482), Expect = 5e-47
 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LLSLLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579

[74][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb03 RepID=C0SI08_PARBP
          Length = 1232

 Score =  190 bits (482), Expect = 5e-47
 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LLSLLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579

[75][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
           RepID=A5DLE5_PICGU
          Length = 1156

 Score =  190 bits (482), Expect = 5e-47
 Identities = 92/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A+M RR+L  + +P  +DDRDY GNKRL
Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +RA++FD   +  I ++ IT G+  A+
Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGMNRAI 437

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487

[76][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
           RepID=B5RUZ7_DEBHA
          Length = 1165

 Score =  189 bits (481), Expect = 7e-47
 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A M RR+L  + +P  +DDRDY GNKRL
Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +RA++FD   +  I ++ IT GL  A+
Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGLNRAI 442

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492

[77][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
           RepID=A5E0Z1_LODEL
          Length = 1157

 Score =  189 bits (481), Expect = 7e-47
 Identities = 93/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A+M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 319 SQLQEGIEAIATTIVAHLTVSNLQFKEKAFYMAMMARRVVMAMHNPKMVDDRDYVGNKRL 378

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +R T+FD   +  I ++ IT GL  A+
Sbjct: 379 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTTEFDALLSINIHSNNITMGLNRAI 438

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 439 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 488

[78][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
           guilliermondii ATCC 6260 RepID=UPI000151B156
          Length = 1156

 Score =  189 bits (480), Expect = 9e-47
 Identities = 92/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A+M RR+L  + +P  +DDRDY GNKRL
Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +RA +FD   +  I ++ IT G+  A+
Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGMNRAI 437

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487

[79][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
           SLH14081 RepID=C5JTE0_AJEDS
          Length = 1204

 Score =  189 bits (480), Expect = 9e-47
 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 366 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 425

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 426 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 485

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 486 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 536

[80][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
           RepID=C5GKN6_AJEDR
          Length = 1228

 Score =  189 bits (480), Expect = 9e-47
 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 390 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 449

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 450 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 509

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 510 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 560

[81][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
           RepID=C4R793_PICPG
          Length = 1158

 Score =  189 bits (480), Expect = 9e-47
 Identities = 92/166 (55%), Positives = 125/166 (75%), Gaps = 2/166 (1%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           E  + +A+ ++ H+ V    F +K  Y+A+M RR++ A+ +P  IDDRDY GNKRLELAG
Sbjct: 328 EGVEAIANTIVAHISVEDLNFREKAIYLAIMTRRVVMAMHNPTMIDDRDYVGNKRLELAG 387

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSGN 370
            L+SLLFEDLFK+ NSD K   D +L K NRA++FD   +I   ++ IT G+  A+S+GN
Sbjct: 388 QLMSLLFEDLFKKFNSDFKANIDKILKKPNRASEFDALLSINVHSNNITTGINRAISTGN 447

Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 448 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 493

[82][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
           RepID=C0P0A1_AJECG
          Length = 1227

 Score =  189 bits (480), Expect = 9e-47
 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 559

[83][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
           RepID=A6R9I0_AJECN
          Length = 1186

 Score =  189 bits (480), Expect = 9e-47
 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 357 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 416

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 417 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 476

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 477 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 527

[84][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
           RepID=A2Q8V9_ASPNC
          Length = 1225

 Score =  189 bits (480), Expect = 9e-47
 Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + +A V++ H+ V    F  K  YVA M RR+L A  D + +DDRDY GNKR
Sbjct: 387 RTHVQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKR 446

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NRA  FD    I   ++ IT G+  A
Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRA 506

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557

[85][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
           CBS767 RepID=UPI00003BE866
          Length = 1165

 Score =  189 bits (479), Expect = 1e-46
 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A M RR+L  + +P  +DDRDY GNKRL
Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +RA +FD   +  I ++ IT GL  A+
Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGLNRAI 442

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492

[86][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
            RepID=B9Q403_TOXGO
          Length = 1324

 Score =  189 bits (479), Expect = 1e-46
 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
            KS VDEA DVL  VVL H+      F  K  ++ +M+RR+L A  DP+ +DD+DYYGNKR
Sbjct: 459  KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 518

Query: 182  LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
            LELAG LLSLLFEDLFKR  + +K+QAD  LS+ ++A                 D  + +
Sbjct: 519  LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 578

Query: 320  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
             TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 579  PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 638

Query: 500  GPR 508
            GPR
Sbjct: 639  GPR 641

[87][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
            RepID=B9PFT5_TOXGO
          Length = 1328

 Score =  189 bits (479), Expect = 1e-46
 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
            KS VDEA DVL  VVL H+      F  K  ++ +M+RR+L A  DP+ +DD+DYYGNKR
Sbjct: 463  KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 522

Query: 182  LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
            LELAG LLSLLFEDLFKR  + +K+QAD  LS+ ++A                 D  + +
Sbjct: 523  LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 582

Query: 320  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
             TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 583  PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 642

Query: 500  GPR 508
            GPR
Sbjct: 643  GPR 645

[88][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
            RepID=B6KDI3_TOXGO
          Length = 1332

 Score =  189 bits (479), Expect = 1e-46
 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
            KS VDEA DVL  VVL H+      F  K  ++ +M+RR+L A  DP+ +DD+DYYGNKR
Sbjct: 467  KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 526

Query: 182  LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
            LELAG LLSLLFEDLFKR  + +K+QAD  LS+ ++A                 D  + +
Sbjct: 527  LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 586

Query: 320  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
             TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 587  PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 646

Query: 500  GPR 508
            GPR
Sbjct: 647  GPR 649

[89][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
           RepID=Q5KC33_CRYNE
          Length = 1129

 Score =  189 bits (479), Expect = 1e-46
 Identities = 99/167 (59%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           D A+  LA +VL HVPV    F  K  Y+A M RR+L A++D   +DDRDY GNKRLELA
Sbjct: 309 DIAQQALAAMVLGHVPVRNMNFRPKCIYLATMARRVLMAMIDDHMVDDRDYVGNKRLELA 368

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
           G LLSLLFED FK  NS++K++ D +L K NRA  FD    IR   D IT     ++S+G
Sbjct: 369 GQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTG 428

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF +ER GVT VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 429 NWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 475

[90][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
           RepID=Q59M52_CANAL
          Length = 1157

 Score =  189 bits (479), Expect = 1e-46
 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D VL K +R ++FD   +  I ++ IT GL  A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489

[91][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
           RepID=B9WLY1_CANDC
          Length = 1157

 Score =  189 bits (479), Expect = 1e-46
 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFKEKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D VL K +R ++FD   +  I ++ IT GL  A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489

[92][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
           RepID=C5M3E6_CANTT
          Length = 1159

 Score =  188 bits (478), Expect = 2e-46
 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  ++ H+ V   QF +K  Y+A M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 321 SQLQEGIEAIATTIVAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 380

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D VL K +R ++FD   +  I ++ IT GL  A+
Sbjct: 381 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 440

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 441 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 490

[93][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
           RepID=C6HGH3_AJECH
          Length = 1227

 Score =  188 bits (477), Expect = 2e-46
 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R  QFD     AI  + IT G+  A
Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GM+TR++SQFEKTRKVSGPR
Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMLTRISSQFEKTRKVSGPR 559

[94][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8NJT3_COPC7
          Length = 1140

 Score =  188 bits (477), Expect = 2e-46
 Identities = 97/167 (58%), Positives = 123/167 (73%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           +EA + LA +VL HVPV    F  K  +VA M RR+L A+ D + +DDRDY GNKRLELA
Sbjct: 314 EEALEALATIVLAHVPVQGLDFRAKAIFVATMTRRVLMAMDDESMVDDRDYVGNKRLELA 373

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
           G LL+LLFEDLFK  NS++K   D VL K +R ++FD    ++   D +T G   A+S+G
Sbjct: 374 GQLLALLFEDLFKTYNSNLKSAIDKVLKKPSRTSEFDAFNTMQMQGDHLTSGFVRAISTG 433

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 434 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 480

[95][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
           70294 RepID=A7TQC8_VANPO
          Length = 1139

 Score =  188 bits (477), Expect = 2e-46
 Identities = 95/170 (55%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S + E  + +A  V+ H+ V    F +K  YVA+M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 311 SILQEGIEAIATTVIAHLTVEALDFREKALYVAMMARRVVMAMHNPKMVDDRDYVGNKRL 370

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D VL K NRA ++D   +I   ++ IT GL  A+
Sbjct: 371 ELAGQLISLLFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAI 430

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 431 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 480

[96][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
           (AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
           nidulans RepID=C8VU19_EMENI
          Length = 1225

 Score =  187 bits (475), Expect = 3e-46
 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + +A V++ H+ V    F  K  YVA M RR+L A  D A +DDRDY GNKR
Sbjct: 387 RTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVANMARRVLMAKNDAALVDDRDYLGNKR 446

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL+K NR   FD    I   ++ IT G+  A
Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRVEAFDAWSVIGMHSNHITQGMNRA 506

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557

[97][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
           RepID=Q75B52_ASHGO
          Length = 1141

 Score =  187 bits (474), Expect = 5e-46
 Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
           + E  + +A  V+ H+ V    F +K  YVA+M RR++ A+ +P  +DDRDY GNKRLEL
Sbjct: 315 LQEGIEAIATTVIAHLTVEALDFREKALYVAMMTRRVIMAIHNPKMVDDRDYVGNKRLEL 374

Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
           AG L+SLLFEDLFK+ N+D K   D VL K NRA  +D   +I   ++ IT GL  A+S+
Sbjct: 375 AGQLMSLLFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAIST 434

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 435 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 482

[98][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
           6340 RepID=C5DEU3_LACTC
          Length = 1144

 Score =  187 bits (474), Expect = 5e-46
 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S + E  + +A  V+ H+ V    F +K  Y+AVM RR++ A+ +P  +DDRDY GNKRL
Sbjct: 316 STLQEGIEAIATTVIAHLTVEALDFREKALYIAVMTRRVVMAMHNPKMVDDRDYVGNKRL 375

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ N+D K   D VL K NRA ++D   +I   ++ I+ GL  A+
Sbjct: 376 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAMEYDALLSINVHSNNISSGLNRAI 435

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 436 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 485

[99][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0D7Q0_LACBS
          Length = 1142

 Score =  187 bits (474), Expect = 5e-46
 Identities = 97/167 (58%), Positives = 122/167 (73%), Gaps = 2/167 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           +EA + LA +VL HVPV    F  K  +VA M RR+L A+ D   +DDRDY GNKRLELA
Sbjct: 316 EEALEALATIVLAHVPVNGLDFRSKAIFVATMTRRVLMAMQDENMVDDRDYVGNKRLELA 375

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
           G LL+LLFEDLFK  NS++K   D VL K +R ++FD    ++   D +T G   A+S+G
Sbjct: 376 GQLLALLFEDLFKTYNSNLKIAIDKVLKKPSRTSEFDAYNTMQMQGDHLTSGFVRAISTG 435

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 482

[100][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
           RepID=A3LP81_PICST
          Length = 1155

 Score =  187 bits (474), Expect = 5e-46
 Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S + E  + +A  V+ H+ V   QF +K  Y+A M RR++  + +P  +DDRDY GNKRL
Sbjct: 320 SVLQEGIEAIATTVIAHITVADLQFREKALYIATMARRVVMTMHNPKMVDDRDYVGNKRL 379

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ NSD K   D +L K +R ++FD   +  I ++ IT GL  A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAI 439

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489

[101][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
           cerevisiae RepID=RPC2_YEAST
          Length = 1149

 Score =  187 bits (474), Expect = 5e-46
 Identities = 93/168 (55%), Positives = 124/168 (73%), Gaps = 2/168 (1%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
           + E  + +A  V+ H+ V    F +K  Y+A+M RR++ A+ +P  IDDRDY GNKRLEL
Sbjct: 320 LQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLEL 379

Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
           AG L+SLLFEDLFK+ N+D K   D VL K NRA ++D   +I   ++ IT GL  A+S+
Sbjct: 380 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 439

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487

[102][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9SHS2_RICCO
          Length = 1139

 Score =  186 bits (473), Expect = 6e-46
 Identities = 94/167 (56%), Positives = 129/167 (77%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K + A  +L  V L +VPV +  F  K  YVAVM+RRM+ A+L+   +DD+DY GNKRLE
Sbjct: 304 KENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLE 363

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK + ++++R  D VL+K NR+++FD+A+ I  D IT GLE  LS+G
Sbjct: 364 LSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTG 423

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           N+ ++RF+M RKG+TQVL RLS+IA++GMMTR++ QFEK+RKVSGPR
Sbjct: 424 NFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPR 470

[103][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9IDF9_POPTR
          Length = 1141

 Score =  186 bits (472), Expect = 8e-46
 Identities = 93/167 (55%), Positives = 129/167 (77%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K + A  +L  V + +VPV +  F  K  YVAVM+RRM+ A+L+   +DD+DY GNKRLE
Sbjct: 300 KENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLE 359

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK + +++++ AD +L K NR+++FD ++ I  D+IT GLE ALS+G
Sbjct: 360 LSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTG 419

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW ++RFRM RKGVTQVL RLS++A++G MTR++ QFEK+RKVSGPR
Sbjct: 420 NWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPR 466

[104][TOP]
>UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
           Pt-1C-BFP RepID=B2W234_PYRTR
          Length = 1167

 Score =  186 bits (471), Expect = 1e-45
 Identities = 96/166 (57%), Positives = 123/166 (74%), Gaps = 2/166 (1%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           EA + L++VVL HVPV    +  K  YVA+M RR+L A+ +P  +DDRDY GNKRLEL+G
Sbjct: 386 EAIECLSNVVLPHVPVEGTNYRPKALYVALMARRVLMAMQNPKLVDDRDYVGNKRLELSG 445

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370
            +LSLLFED FKR N D K   D VL K  RA +FD     ++  + IT G+E A+++GN
Sbjct: 446 QMLSLLFEDHFKRFNHDFKLSIDKVLKKPVRAQEFDAFSHFSVHKNHITMGVERAIATGN 505

Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 506 WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551

[105][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
           RepID=C7YHY2_NECH7
          Length = 1156

 Score =  185 bits (470), Expect = 1e-45
 Identities = 94/171 (54%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V+E  D LA++V+ HVP+    F  K  YVA+M R++L A  +P  +DDRD+ GNKR
Sbjct: 315 RNHVEEGLDALANLVIAHVPIEELDFYPKAIYVAMMTRKVLMAAHNPKLVDDRDFVGNKR 374

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
           LELAG LLSLLFEDLFKR   ++K   D  L K NRA   D    I    +TI  G+  A
Sbjct: 375 LELAGQLLSLLFEDLFKRFTVEVKMSIDKFLKKNNRAVPLDAVHMISNHANTIGIGINRA 434

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 435 IQTGNWSVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485

[106][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y486_CLAL4
          Length = 1159

 Score =  185 bits (470), Expect = 1e-45
 Identities = 89/170 (52%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++ E  + +A  V+ H+ V    F +K  Y+A+M R++L  + +P+ +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTVIAHLTVSDLNFREKALYIAIMARKVLMTMHNPSMVDDRDYVGNKRL 379

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ N+D K   D +L K +R ++FD   +  I ++ IT G+  A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNTDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGMNRAI 439

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489

[107][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
           RepID=C4JMP0_UNCRE
          Length = 1202

 Score =  185 bits (470), Expect = 1e-45
 Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + EA + +A V++ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 364 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 423

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R   FD     AI  + IT G+  A
Sbjct: 424 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 483

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 484 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 534

[108][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
           RepID=UPI000023E0C8
          Length = 1157

 Score =  185 bits (469), Expect = 2e-45
 Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V+E  D LA++V+ HVP+    F  K  YVA+M RR+L A  +P  +DDRD+ GNKR
Sbjct: 315 RNHVEEGLDALANLVIAHVPIEGLDFYPKAIYVAMMTRRVLIAAHNPKLVDDRDFVGNKR 374

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
           LELAG LLSLLFEDLFK+  ++++   D  L K NRA   D    I    + I YG+  A
Sbjct: 375 LELAGQLLSLLFEDLFKQFTTNVRMSIDKFLKKNNRAVPLDAVNMISNHANNIGYGINRA 434

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 435 IQTGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485

[109][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
           RepID=Q6FLJ9_CANGA
          Length = 1133

 Score =  185 bits (469), Expect = 2e-45
 Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
           + E  + +A  ++ H+ V    F +K  Y+A M RR++ A+ +P  +DDRDY GNKRLEL
Sbjct: 308 LQEGIEAIATTIIAHLTVEALDFREKALYIATMTRRVVMAMHNPKMVDDRDYVGNKRLEL 367

Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
           AG L+SLLFEDLFK+ N+D K   D VL K NRA ++D   +I   ++ IT GL  A+S+
Sbjct: 368 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 427

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 428 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 475

[110][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
           RepID=Q6CLR1_KLULA
          Length = 1142

 Score =  185 bits (469), Expect = 2e-45
 Identities = 92/170 (54%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S + E  + +A  V+ H+ V    F +K  Y+A+M RR++ A+ +P  +DDRDY GNKRL
Sbjct: 314 SILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAIDNPKMVDDRDYVGNKRL 373

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ N+D K   D VL K NRA  +D    I   ++ IT G+  A+
Sbjct: 374 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAEMYDALLTINVHSNNITTGMNRAI 433

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 434 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 483

[111][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
           RepID=C5FVS4_NANOT
          Length = 1211

 Score =  185 bits (469), Expect = 2e-45
 Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ V EA + ++ V++ HV V    F  K  YV  M RR+L A LDP+ +DDRDY GNKR
Sbjct: 373 RNYVAEAIEAISSVIISHVQVQDMNFRPKALYVTYMARRVLMAKLDPSLVDDRDYVGNKR 432

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R   FD     AI  + IT G+  A
Sbjct: 433 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRA 492

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +++GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 IATGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543

[112][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
           RepID=Q27492_CAEEL
          Length = 1154

 Score =  184 bits (468), Expect = 2e-45
 Identities = 96/167 (57%), Positives = 121/167 (72%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K  EA D L++ ++ H+  P   F  K  Y+ +M RR++   L    +DDRD+YGNKRLE
Sbjct: 317 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGLMTRRLIQTELGENGLDDRDFYGNKRLE 376

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LLSLLFED+FKR NS++KR AD  L K   A   D+ K +R D IT  + +A+S+G
Sbjct: 377 LAGSLLSLLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 435

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 436 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 482

[113][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
           putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
          Length = 1104

 Score =  184 bits (467), Expect = 3e-45
 Identities = 94/164 (57%), Positives = 120/164 (73%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           EA D L+++++ HVP P      K  Y+ +MVRR++ A +     DDRD+YGNKRLELAG
Sbjct: 301 EAIDFLSNLMIAHVPCPDGNMKMKAVYLGLMVRRLMQAEVGDTECDDRDFYGNKRLELAG 360

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
            LL+LLFED+FKR NS++KR AD  L K   A   D+ K +R D IT  L  AL++GNW 
Sbjct: 361 SLLALLFEDVFKRFNSELKRIADNSLGKT-LAAPLDIVKHVRQDLITNALVDALATGNWT 419

Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           I+RF+MER+GVTQVLSRLS+I+ +GMMTR+ S FEKTRKVSGPR
Sbjct: 420 IKRFKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPR 463

[114][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
           putative n=1 Tax=Pediculus humanus corporis
           RepID=UPI000186CFA7
          Length = 1137

 Score =  183 bits (465), Expect = 5e-45
 Identities = 95/170 (55%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
           K+ VD+A D+LA+ +L HV V  ++   +K  Y+ +MVRR+L A  DP    D D+YGNK
Sbjct: 306 KNVVDDAGDILANTILAHVDVLDFRCMCEKTQYLGLMVRRILQAETDPRFYTDLDHYGNK 365

Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358
           RLELAG +L LLFED  KR N ++K  AD ++ K  +A QFD+ K +R D IT G  +A+
Sbjct: 366 RLELAGAMLGLLFEDFLKRYNLELKMIADKMIPKI-KAAQFDIVKHLRQDFITNGFSNAI 424

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW I+RFRM  +GVTQVLSRLS+I+A GMMTR+ S FEKTRKVSGPR
Sbjct: 425 STGNWTIKRFRMHTQGVTQVLSRLSYISAFGMMTRVNSHFEKTRKVSGPR 474

[115][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q9P6E7_NEUCR
          Length = 1155

 Score =  183 bits (465), Expect = 5e-45
 Identities = 93/171 (54%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++  +E  D LA++V+ HV V    F  K  Y+A+MVRR+L A  +P  +DDRD+ GNKR
Sbjct: 316 RNHAEEGLDALANLVIAHVTVEGLDFYPKAVYIAMMVRRVLMAAQNPKLVDDRDFVGNKR 375

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD--TITYGLESA 355
           LELAG L+SLLFEDLFK+  SD+K   D    K NR + +D   AI  +   I++GL  A
Sbjct: 376 LELAGQLISLLFEDLFKKFISDVKYNIDNFFKKPNRTSTYDPHGAIMANGHYISHGLNRA 435

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + SGNW ++RF M R G+T VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQSGNWTVKRFNMNRAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486

[116][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
           732 RepID=C5DY85_ZYGRC
          Length = 1143

 Score =  183 bits (465), Expect = 5e-45
 Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S + E  + +A  V+ H+ V    F +K  Y+A+M RR++ A+ +   +DDRDY GNKRL
Sbjct: 315 SVLQEGIEAIATTVIAHLTVAALDFREKALYIAMMTRRVVMAMQNYKMVDDRDYVGNKRL 374

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
           ELAG L+SLLFEDLFK+ N+D K   D VL K NRA ++D   +I   ++ IT GL  A+
Sbjct: 375 ELAGQLISLLFEDLFKKFNNDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLSRAI 434

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 435 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 484

[117][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
           10500 RepID=B8MJE1_TALSN
          Length = 1212

 Score =  182 bits (463), Expect = 9e-45
 Identities = 98/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ ++EA + ++ VV+ HV V    F  K  YVA M RR+L A  DP+ +DDRDY GNKR
Sbjct: 374 KTHIEEAIEAISSVVISHVEVTNMDFRPKAIYVANMARRVLMAKHDPSMVDDRDYVGNKR 433

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK     VL K  R   FD     A+  + IT+G+  A
Sbjct: 434 LELAGQLLALLFEDLFKKFCFDIKMNITKVLGKRRREI-FDAMSVVALHGNHITHGMNRA 492

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543

[118][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
           pisum RepID=UPI00017918AB
          Length = 1112

 Score =  182 bits (462), Expect = 1e-44
 Identities = 89/166 (53%), Positives = 120/166 (72%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
           + E  D L+ V+L H+PV    +  K  Y ++MVRR+++++ +P   D +DYYGNK L+L
Sbjct: 288 ITEVHDFLSTVILAHIPVTNTNYHMKAIYTSIMVRRLIFSLSNPDLFDSKDYYGNKCLDL 347

Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGN 370
            G  LSLLF+D FKR   ++K  AD  + K  +AT FD+ K IRTDTIT  L  A+ +GN
Sbjct: 348 PGSFLSLLFDDTFKRFTFELKSVADKNIPKV-KATPFDIIKYIRTDTITNALVFAIQTGN 406

Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           W I+RFRMER GVTQVL+RLS+++A+GMMTR+ SQFEK+RKVSGPR
Sbjct: 407 WSIKRFRMERHGVTQVLTRLSYLSAIGMMTRVNSQFEKSRKVSGPR 452

[119][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
          Length = 1233

 Score =  182 bits (462), Expect = 1e-44
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ + EA + +A V++ HV V    F  K  YVA M RR+L A  D + +DDRDY GNKR
Sbjct: 395 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKR 454

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK   D VL K  R   FD     AI  + IT G+  A
Sbjct: 455 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 514

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 515 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 565

[120][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
           RepID=A4R1B6_MAGGR
          Length = 1158

 Score =  182 bits (462), Expect = 1e-44
 Identities = 93/171 (54%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++  +E  + LA++++ HVP+    F  K  YVA+MVRR+L A  D   +DDRD+ GNKR
Sbjct: 318 RNNAEEGLEALANMIIGHVPILDLDFYPKACYVAMMVRRVLMAAHDHKLVDDRDFVGNKR 377

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDT--ITYGLESA 355
           LELAG +LSLLFEDLFK+   D++   D VL K+NR   FD   +I   +  IT G+  A
Sbjct: 378 LELAGQMLSLLFEDLFKKFLVDLRFNIDKVLRKSNRGVAFDPLNSITATSGHITAGMNRA 437

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +SSGNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 438 ISSGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 488

[121][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
           RepID=B6VBN7_CAEBE
          Length = 1152

 Score =  182 bits (461), Expect = 1e-44
 Identities = 95/167 (56%), Positives = 120/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K  EA D L++ ++ H+  P   F  K  Y+  M RR++   L    +DDRD+YGNKRLE
Sbjct: 316 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTELGENELDDRDFYGNKRLE 375

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+LLFED+FKR NS++KR AD  L K   A   D+ K +R D IT  + +A+S+G
Sbjct: 376 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 434

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 435 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 481

[122][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
           albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
          Length = 1105

 Score =  181 bits (460), Expect = 2e-44
 Identities = 91/171 (53%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ ++E  D L+++++ H+PV    F  K  YVA M RR+L A  + + +DDRD+ GNKR
Sbjct: 316 KNNIEEGMDALSNLIIAHIPVEGLDFYPKAIYVAFMTRRVLMAQANMSLVDDRDFVGNKR 375

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
           LELAG LLSLLFEDLFK+   D+K   D VL K NRA   D    I    + I  G+  A
Sbjct: 376 LELAGQLLSLLFEDLFKKFCGDVKASIDKVLKKDNRAVAMDAVTMISNHANNIGQGINRA 435

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + +GNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQTGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 486

[123][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
           RepID=A8WJV6_CAEBR
          Length = 1160

 Score =  181 bits (459), Expect = 2e-44
 Identities = 94/167 (56%), Positives = 120/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K  EA D L++ ++ H+  P   F  K  Y+  M RR++   +    +DDRD+YGNKRLE
Sbjct: 302 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTEMGENELDDRDFYGNKRLE 361

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+LLFED+FKR NS++KR AD  L K   A   D+ K +R D IT  + +A+S+G
Sbjct: 362 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 420

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 421 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 467

[124][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7QMF0_VITVI
          Length = 1146

 Score =  180 bits (456), Expect = 6e-44
 Identities = 86/160 (53%), Positives = 125/160 (78%)
 Frame = +2

Query: 29  VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
           +L    + +VPV +  F  K  YVAVM+RRM+ A+L+   +DD+DY GNKRLEL+G L+S
Sbjct: 303 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 362

Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388
           LLFEDLFK + S++K+  DA+L+K +R+++FD ++ I  D+IT GLE  LS+GNW ++RF
Sbjct: 363 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLSTGNWDVKRF 422

Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           RM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR
Sbjct: 423 RMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 462

[125][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001985A70
          Length = 1142

 Score =  177 bits (450), Expect = 3e-43
 Identities = 86/163 (52%), Positives = 126/163 (77%), Gaps = 3/163 (1%)
 Frame = +2

Query: 29  VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
           +L    + +VPV +  F  K  YVAVM+RRM+ A+L+   +DD+DY GNKRLEL+G L+S
Sbjct: 308 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 367

Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIR---TDTITYGLESALSSGNWII 379
           LLFEDLFK + S++K+  DA+L+K +R+++FD ++ +R    D+IT GLE  LS+GNW +
Sbjct: 368 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDV 427

Query: 380 RRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +RFRM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR
Sbjct: 428 KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 470

[126][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6QHR9_PENMQ
          Length = 1212

 Score =  177 bits (449), Expect = 4e-43
 Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+ ++EA + ++ V++ HV V    F  K  YVA M RR+L A  D   +DDRDY GNKR
Sbjct: 374 KTHIEEAIEAISSVIISHVEVTDMDFRPKAIYVANMARRVLMAKHDSDMVDDRDYVGNKR 433

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
           LELAG LL+LLFEDLFK+   DIK     VL K  R   FD    +    + IT+G+  A
Sbjct: 434 LELAGQLLALLFEDLFKKFQFDIKMNITKVLGKRRREI-FDAMSVVTLHGNHITHGMNRA 492

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543

[127][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
           binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
          Length = 1161

 Score =  176 bits (445), Expect = 1e-42
 Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   A  +L  + L HVPVP   F QK  YV VM+RRM+ A+L+   +DD+DY GNKRLE
Sbjct: 311 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 370

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358
           L+G L+SLLFEDLFK + S+  +  D +L+K  RA++FD ++ +  D   +I+ GLE  L
Sbjct: 371 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 430

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR
Sbjct: 431 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 480

[128][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
           RepID=Q9FKF1_ARATH
          Length = 1194

 Score =  176 bits (445), Expect = 1e-42
 Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   A  +L  + L HVPVP   F QK  YV VM+RRM+ A+L+   +DD+DY GNKRLE
Sbjct: 332 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 391

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358
           L+G L+SLLFEDLFK + S+  +  D +L+K  RA++FD ++ +  D   +I+ GLE  L
Sbjct: 392 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 451

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR
Sbjct: 452 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 501

[129][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
           RepID=Q2GW04_CHAGB
          Length = 1155

 Score =  175 bits (444), Expect = 1e-42
 Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +S V+E  D LA++++ HV +    F  K  Y+++MVRR+L A  +P  +DDRD+ GNKR
Sbjct: 316 RSPVEEGLDALANIIIAHVTIKDLDFYPKSIYISMMVRRVLMAAHNPRLVDDRDFVGNKR 375

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
           LELAG LLSLLFED+FK     +K   +    K NR + +D    I +    IT GL  A
Sbjct: 376 LELAGQLLSLLFEDMFKMFVGGLKGNMEYFFKKPNRTSAYDPVGPISSQGQYITQGLNRA 435

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQSGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486

[130][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179EFE0
          Length = 796

 Score =  175 bits (443), Expect = 2e-42
 Identities = 90/134 (67%), Positives = 113/134 (84%)
 Frame = +2

Query: 107 MVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN 286
           MVRR++ A  D   +DDRDYYGNKRLELAG LLSLLFEDLFK+ NS++K+ AD V+ K  
Sbjct: 1   MVRRVILAQGDNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-Q 58

Query: 287 RATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 466
           RA QFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR+
Sbjct: 59  RAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRI 118

Query: 467 TSQFEKTRKVSGPR 508
           +SQFEKTRKVSGPR
Sbjct: 119 SSQFEKTRKVSGPR 132

[131][TOP]
>UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii
           RepID=Q5NVB0_PONAB
          Length = 1116

 Score =  174 bits (441), Expect = 3e-42
 Identities = 94/168 (55%), Positives = 122/168 (72%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K+K++EAR++LA  +L HVPV  + F  K  Y AVMVRR++ A  D   +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LLSLLF DLFK+ NS++K+ AD V+ K  RA QFDV              +A+S
Sbjct: 362 LELAGQLLSLLFGDLFKKFNSEMKKIADQVIPK-QRAAQFDVVNTCAKTRSPMAWVNAIS 420

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505
           +GNW ++RF+M+R+ V QVL RL +I+A+GMMTR++SQFEKTRKVS P
Sbjct: 421 TGNWSLKRFKMDRQ-VNQVLYRLLYISALGMMTRISSQFEKTRKVSVP 467

[132][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5Z6F6_SORBI
          Length = 1137

 Score =  172 bits (437), Expect = 9e-42
 Identities = 90/168 (53%), Positives = 116/168 (69%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           +K   +  +L  V + HVPV       K  Y AVM+RRML A+L+    DD+DY GNKR 
Sbjct: 293 NKEGRSNSILHDVFIAHVPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRF 352

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
           EL+G L+SLLFEDLFK +NS    + +    K  R++  D ++ I  DTIT+GLE A+S+
Sbjct: 353 ELSGQLISLLFEDLFKTMNSQAVERMNKNSDKT-RSSPLDFSQLIMQDTITFGLERAIST 411

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GNW I+RFRM RKGV+QVLSRLS++A +G MTR+T QFEKTRK SGPR
Sbjct: 412 GNWDIKRFRMHRKGVSQVLSRLSYMATLGYMTRITPQFEKTRKTSGPR 459

[133][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
           RepID=B2B0Z1_PODAN
          Length = 1160

 Score =  172 bits (435), Expect = 2e-41
 Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ ++E  D L+++++ HV V    F  K  Y+A+MVRR+L AV +P  +DDRD+ GNKR
Sbjct: 321 RNPIEEGLDALSNLIVAHVTVKDLDFYPKTIYIAMMVRRILMAVHNPELVDDRDFVGNKR 380

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
           LELAG LLSLLFEDL K     +K   +    + NR + +D    I +    IT GL  A
Sbjct: 381 LELAGQLLSLLFEDLLKGFIGQLKANMEHFFKRPNRTSAYDPIGPIGSYGTMITQGLNRA 440

Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 441 IQSGNWTVKRFGMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 491

[134][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
           RepID=Q236N3_TETTH
          Length = 1141

 Score =  171 bits (434), Expect = 2e-41
 Identities = 82/175 (46%), Positives = 124/175 (70%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++ VDEARD++ +VVLCH+P   Y +  +  ++ +M RR++ A+ DP+ ID RDYYGNKR
Sbjct: 290 RNPVDEARDIITNVVLCHIPCKNYNYYPRAIFLGLMARRLIEALDDPSKIDKRDYYGNKR 349

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT------DTITYG 343
           ++ AG  L LLFED FK+ N  ++++    + K ++   + +   + +      D IT G
Sbjct: 350 MKCAGWYLELLFEDKFKQFNMMVRKELSKEIEK-HKNKSYPIKNRVESILEKNHDIITQG 408

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           L +A+S+GNW I+RFRM+  GVTQVL+R+S+IAA+GMMTRM SQF+K+RK++GPR
Sbjct: 409 LNNAISTGNWTIKRFRMDTVGVTQVLARISYIAAIGMMTRMNSQFKKSRKLTGPR 463

[135][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q84R88_ORYSJ
          Length = 1174

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 119/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   ++ +L  V + HVPV    F  K  Y AVM+RRM+ A+L+    DD+DY GNKRLE
Sbjct: 331 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 390

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK +NS+     +    K + ++  D++  I+ + IT+GLE A+S+G
Sbjct: 391 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 449

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 450 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 496

[136][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10JZ3_ORYSJ
          Length = 1155

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 119/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   ++ +L  V + HVPV    F  K  Y AVM+RRM+ A+L+    DD+DY GNKRLE
Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK +NS+     +    K + ++  D++  I+ + IT+GLE A+S+G
Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477

[137][TOP]
>UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10JZ2_ORYSJ
          Length = 1039

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 119/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   ++ +L  V + HVPV    F  K  Y AVM+RRM+ A+L+    DD+DY GNKRLE
Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK +NS+     +    K + ++  D++  I+ + IT+GLE A+S+G
Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477

[138][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=B9F8X6_ORYSJ
          Length = 1115

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 119/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   ++ +L  V + HVPV    F  K  Y AVM+RRM+ A+L+    DD+DY GNKRLE
Sbjct: 372 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 431

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK +NS+     +    K + ++  D++  I+ + IT+GLE A+S+G
Sbjct: 432 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 490

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 491 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 537

[139][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
           RepID=B8AR02_ORYSI
          Length = 1117

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 119/167 (71%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           K   ++ +L  V + HVPV    F  K  Y AVM+RRM+ A+L+    DD+DY GNKRLE
Sbjct: 374 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 433

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           L+G L+SLLFEDLFK +NS+     +    K + ++  D++  I+ + IT+GLE A+S+G
Sbjct: 434 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 492

Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 493 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 539

[140][TOP]
>UniRef100_Q2N123 RNA polymerase III second largest subunit (Fragment) n=1
           Tax=Leucosolenia sp. AR-2003 RepID=Q2N123_9METZ
          Length = 404

 Score =  170 bits (430), Expect = 6e-41
 Identities = 85/149 (57%), Positives = 116/149 (77%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           ++KV+EA + LA+++L HVPV  + F  K AY+A+MVRR+L A  D    DDRDYYGNKR
Sbjct: 257 RTKVEEALEALANIILAHVPVVEFNFRLKTAYMALMVRRVLQAQGDMESADDRDYYGNKR 316

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           LELAG LL+LLFEDLFK+LN+++K+ AD + +K  RA  FD+ K +R D IT GL  ++S
Sbjct: 317 LELAGQLLALLFEDLFKKLNTELKQFADKMANKP-RAEPFDITKQMRPDIITNGLVHSIS 375

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAM 448
           +GNW ++RF+M+R GVTQVLSRLS+I+A+
Sbjct: 376 TGNWSVKRFKMDRAGVTQVLSRLSYISAL 404

[141][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
            RepID=B3LB54_PLAKH
          Length = 1401

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 15/184 (8%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
            K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L +  +   +DD+DYYGNK
Sbjct: 510  KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 569

Query: 179  RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316
            RLELAG L+SLLFEDL+KR    +K+Q D  LSK  ++              T  DV ++
Sbjct: 570  RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNETYPDVFRS 629

Query: 317  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496
            +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV
Sbjct: 630  LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 689

Query: 497  SGPR 508
            SGPR
Sbjct: 690  SGPR 693

[142][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
            RepID=A5K0G6_PLAVI
          Length = 1427

 Score =  166 bits (421), Expect = 6e-40
 Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 15/184 (8%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
            K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L    +   +DD+DYYGNK
Sbjct: 507  KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDGANNKNELDDKDYYGNK 566

Query: 179  RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316
            RLELAG L+SLLFEDL+KR    +K+Q D  LSK  ++              T  DV ++
Sbjct: 567  RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNDTYPDVFRS 626

Query: 317  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496
            +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV
Sbjct: 627  LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 686

Query: 497  SGPR 508
            SGPR
Sbjct: 687  SGPR 690

[143][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
           RepID=Q6E6F3_ANTLO
          Length = 1014

 Score =  166 bits (421), Expect = 6e-40
 Identities = 87/170 (51%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           S++DEAR +L  VVL ++P       +K   VA+M+R +L A L+   +DD D+ GNKR 
Sbjct: 212 SRIDEARTILYEVVLPNIPNDGIDMRRKAITVAIMIRVLLQAELNMISMDDIDFLGNKRF 271

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358
           ELAG LLS+LFED F R NS++K+  D VLSK+ R    D      ++ + I+     A+
Sbjct: 272 ELAGNLLSILFEDTFLRFNSELKKSIDKVLSKSQRTQDLDALTFLNLQVNLISNSFVRAI 331

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW +RRFRMER GVTQVLSRLS+IA +G M ++ SQFEKTRK+SGPR
Sbjct: 332 STGNWTVRRFRMERAGVTQVLSRLSYIAMIGSMAKIQSQFEKTRKISGPR 381

[144][TOP]
>UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4QD48_SCHMA
          Length = 1126

 Score =  166 bits (420), Expect = 8e-40
 Identities = 86/164 (52%), Positives = 116/164 (70%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           E +  L  +++ HV + +  FA +  ++  MVR ++ A      ++DRD+YGNKR+ELAG
Sbjct: 284 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPVNDRDFYGNKRIELAG 343

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
            LL+LLFED+FK  N D+      + +K  R T FD+++ I+T  IT  L  A+SSGNWI
Sbjct: 344 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 402

Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR
Sbjct: 403 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 446

[145][TOP]
>UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4QD47_SCHMA
          Length = 1128

 Score =  166 bits (419), Expect = 1e-39
 Identities = 87/164 (53%), Positives = 115/164 (70%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           E +  L  +++ HV + +  FA +  ++  MVR ++ A       DDRD+YGNKR+ELAG
Sbjct: 297 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPPDDRDFYGNKRIELAG 356

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
            LL+LLFED+FK  N D+      + +K  R T FD+++ I+T  IT  L  A+SSGNWI
Sbjct: 357 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 415

Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR
Sbjct: 416 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 459

[146][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
           RepID=Q4D9P5_TRYCR
          Length = 1130

 Score =  165 bits (418), Expect = 1e-39
 Identities = 86/175 (49%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
           KSK D A + L +V+LCH+   + Q    F  K  YV  MVRRM+ A +D + +D+RD+Y
Sbjct: 305 KSKADNAAEFLGNVLLCHIREGQVQRDWNFRHKALYVCFMVRRMIEASVDSSLLDERDFY 364

Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
           GNKR E  G L+ LLFEDL K+ N  +K   D  LSK +    F+V + + +  + I  G
Sbjct: 365 GNKRFETTGTLMGLLFEDLLKQFNRVVKTAMDQQLSKKDTTKAFNVKQLMESKLEVIQSG 424

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +  ALSSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEK+RK+SGPR
Sbjct: 425 MRVALSSGRWELKRFNMSRQGITQVLSRLSYIACIGMMTRLASSFEKSRKISGPR 479

[147][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
           RepID=B3S5S8_TRIAD
          Length = 1016

 Score =  165 bits (418), Expect = 1e-39
 Identities = 90/177 (50%), Positives = 117/177 (66%), Gaps = 8/177 (4%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           K  VDEARD+LA+VVL H+P                           + +DD+DYYGNKR
Sbjct: 221 KLPVDEARDLLANVVLSHIP---------------------------SILDDKDYYGNKR 253

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN--------RATQFDVAKAIRTDTIT 337
           LELAG LL+LLFEDLFK+ NS++K  A+  + K          R  +FD+ K +R D IT
Sbjct: 254 LELAGQLLALLFEDLFKKFNSELKSIAEKNIPKQRAGPVNMNLRFLEFDIVKYMRQDQIT 313

Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            G   AL++GNW I+R++M+R GVTQVLSRLS+++A+GMMTR++SQFEKTRKVSGPR
Sbjct: 314 NGFNLALTTGNWSIKRYKMDRAGVTQVLSRLSYLSALGMMTRISSQFEKTRKVSGPR 370

[148][TOP]
>UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
           RepID=A4HBG9_LEIBR
          Length = 1125

 Score =  165 bits (418), Expect = 1e-39
 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
           +SK D+A + LA+V+LCH+   + Q    F  K  YV  MVR M+ A  D + +D+RD+Y
Sbjct: 300 RSKADKAAEFLANVLLCHIRESQMQKDWNFRHKAFYVCFMVRGMIEASFDASLLDERDFY 359

Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
           GNKR E  G L++LLFEDL K+ N  +K   D  LSK +    F+V + + +  + I  G
Sbjct: 360 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSKRDSTRPFNVKQLMESKMEVIQNG 419

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +  A+SSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEKTRKVSGPR
Sbjct: 420 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIACLGMMTRLASSFEKTRKVSGPR 474

[149][TOP]
>UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
            RepID=Q8I5X9_PLAF7
          Length = 1450

 Score =  164 bits (416), Expect = 2e-39
 Identities = 90/185 (48%), Positives = 122/185 (65%), Gaps = 16/185 (8%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
            K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L +  +   IDD+DYYGNK
Sbjct: 530  KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNEIDDKDYYGNK 589

Query: 179  RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF---------------DVAK 313
            RLELAG L+SLLFEDL+KR    +K+Q D  LSK  ++                  DV +
Sbjct: 590  RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYNSKLRSTGNNMNDNYPDVFR 649

Query: 314  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 493
             +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RK
Sbjct: 650  NLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRK 709

Query: 494  VSGPR 508
            VSGPR
Sbjct: 710  VSGPR 714

[150][TOP]
>UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major
           RepID=Q4QD43_LEIMA
          Length = 1132

 Score =  164 bits (416), Expect = 2e-39
 Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
           +SK D+A + LA+V+LCH+   + Q    F  K  YV  MVR M+ A  D + +D+RD+Y
Sbjct: 307 RSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDTSLLDERDFY 366

Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
           GNKR E  G L++LLFEDL K+ N  +K   D  LS+ +    F+V + + +  + I  G
Sbjct: 367 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSRKDSTRPFNVKQLMESKMEVIQNG 426

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +  A+SSG W ++RF M R+G+TQVLSRLS+IA++GMMTR+ S FEKTRKVSGPR
Sbjct: 427 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGPR 481

[151][TOP]
>UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma
           brucei RepID=C9ZHX4_TRYBG
          Length = 1129

 Score =  164 bits (416), Expect = 2e-39
 Identities = 85/175 (48%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
           KSK D A + LA+V+LCH+     Q    F  K  YV  MVRRM+ A +D + +D+RD+Y
Sbjct: 304 KSKADSAAEFLANVLLCHIREGEVQRDWNFRHKALYVCFMVRRMVEASVDSSLLDERDFY 363

Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
           GNKR E  G L+ LLFEDL K+ N  +K   D +LSK +    F++ + + +  + I  G
Sbjct: 364 GNKRFETTGTLMGLLFEDLLKQYNRVVKTAMDQLLSKKDTTKPFNLKQLMESKMEVIQNG 423

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +  ALSSG W ++RF M R+G+TQVLSRLS+I+ +GMMTR+ S FEK+RK+SGPR
Sbjct: 424 MRVALSSGRWELKRFNMSRQGITQVLSRLSYISCIGMMTRLASSFEKSRKISGPR 478

[152][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
           RepID=Q8SQY8_ENCCU
          Length = 1110

 Score =  162 bits (410), Expect = 1e-38
 Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           ++++E   VL+  VL +V +      +K  Y+A+MVRR+    L+    DD+D+ GNKR 
Sbjct: 284 NRIEEVLTVLSEKVLPNVQIEGCDLRKKGIYIALMVRRLAQTKLNILREDDKDFVGNKRF 343

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358
           ELAG LLS+LFED FKR N ++K+  D +LSK +RA +FD      ++ + IT  L  A+
Sbjct: 344 ELAGQLLSILFEDTFKRFNFELKKSIDKILSKRSRAQEFDALTFLNLQANMITSTLARAI 403

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           S+GNW ++RFRMER GVT VLSR S+I+A+GMMT++ S FEKTRKVSGPR
Sbjct: 404 STGNWNLKRFRMERSGVTHVLSRHSYISALGMMTKINSHFEKTRKVSGPR 453

[153][TOP]
>UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
            RepID=Q7RNH0_PLAYO
          Length = 1323

 Score =  162 bits (409), Expect = 2e-38
 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
 Frame = +2

Query: 2    KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
            K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L +  +   +DD+DYYGNK
Sbjct: 443  KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 502

Query: 179  RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
            RLELAG L+SLLFEDL+KR    +K+Q D  LSK  +++                     
Sbjct: 503  RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 562

Query: 302  --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
              DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 563  YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 622

Query: 476  FEKTRKVSGPR 508
            FEK RKVSGPR
Sbjct: 623  FEKGRKVSGPR 633

[154][TOP]
>UniRef100_Q4YMS1 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
           Tax=Plasmodium berghei RepID=Q4YMS1_PLABE
          Length = 607

 Score =  162 bits (409), Expect = 2e-38
 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
           K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L +  +   +DD+DYYGNK
Sbjct: 329 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 388

Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
           RLELAG L+SLLFEDL+KR    +K+Q D  LSK  +++                     
Sbjct: 389 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 448

Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
             DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 449 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 508

Query: 476 FEKTRKVSGPR 508
           FEK RKVSGPR
Sbjct: 509 FEKGRKVSGPR 519

[155][TOP]
>UniRef100_Q4XDD3 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
           Tax=Plasmodium chabaudi RepID=Q4XDD3_PLACH
          Length = 432

 Score =  162 bits (409), Expect = 2e-38
 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
           K  ++E  D L+ V+L H+    +Y F  K   + +M+RR+L +  +   +DD+DYYGNK
Sbjct: 178 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 237

Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
           RLELAG L+SLLFEDL+KR    +K+Q D  LSK  +++                     
Sbjct: 238 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKMKNNSSVGGNNNFSDNS 297

Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
             DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 298 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 357

Query: 476 FEKTRKVSGPR 508
           FEK RKVSGPR
Sbjct: 358 FEKGRKVSGPR 368

[156][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=Q5CPZ8_CRYPV
          Length = 1287

 Score =  159 bits (402), Expect = 1e-37
 Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 15/183 (8%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           + +D+  + L  V+L H+         K  ++ +M +R+L A  D + +DD+DYYGNKR+
Sbjct: 417 TSIDDVLETLNRVLLSHIGTIYTDLHPKALFLCLMAKRVLDASEDNSLLDDKDYYGNKRI 476

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVL---------SKA------NRATQFDVAKAI 319
           ELAG L+S+LFEDLFKR +   K+Q D  L         SKA      + +T  D  + +
Sbjct: 477 ELAGQLISILFEDLFKRFSVLTKKQIDQTLIRYFQTRDASKAGTGRDDSNSTYPDCFRNL 536

Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
            TD IT G+++ALS+GNW I+RFRMER G+TQVL+R S+IA++G+MTR+ SQFEK RKVS
Sbjct: 537 PTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLTRFSYIASLGIMTRVDSQFEKARKVS 596

Query: 500 GPR 508
           GPR
Sbjct: 597 GPR 599

[157][TOP]
>UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
           RepID=A0D7M6_PARTE
          Length = 1131

 Score =  158 bits (399), Expect = 2e-37
 Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
 Frame = +2

Query: 14  DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
           D+AR+ LA V L HV   +Y F  K  Y+  MVRR++ A+ D   +DD+DYYGNKR+  A
Sbjct: 289 DQAREKLAQVFLAHVNCKKYDFYPKAIYLGQMVRRLILAMEDKRFVDDKDYYGNKRMRCA 348

Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKAN-RATQFDVAKAIRT--DTITYGLESALSS 364
           G LL LLFEDLFK LNS I       L KAN + T  DV   ++     IT GL  A+ +
Sbjct: 349 GNLLELLFEDLFKGLNSTISSILKKELGKANCKFTPKDVTMKMKEFGVDITKGLNRAIKT 408

Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           G W I+RF M+R+GVTQ+L+R+S+ +A+GM+T+M SQ +KT KVSGPR
Sbjct: 409 GKWTIQRFHMDRQGVTQLLARISYTSALGMLTKMRSQVQKTLKVSGPR 456

[158][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
           bovis RepID=A7AM79_BABBO
          Length = 1171

 Score =  156 bits (394), Expect = 9e-37
 Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 11/177 (6%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           +++  D+L  V+L H+P+   + F+ KI  + +M RR+L        +DD+D+YGNKRLE
Sbjct: 343 IEDTHDILTRVLLSHIPMRNCRDFSGKIKSLCLMARRVLSVASGKEPMDDKDHYGNKRLE 402

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSK----------ANRATQFDVAKAIRTDTIT 337
           LAG L+S+LFEDLFK     +K+Q DA L++            +A   D   ++ TD IT
Sbjct: 403 LAGQLISILFEDLFKAFLGQLKKQIDATLTRHYEIVSNCHGGEQAKYPDCLVSLPTDIIT 462

Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            G+++ +S+GNW I+RFR+ER GV+Q+LSRLS+I+ +GMMT+  SQFEK RKVS PR
Sbjct: 463 RGMQATISTGNWNIKRFRIERSGVSQILSRLSYISCLGMMTKTNSQFEKGRKVSKPR 519

[159][TOP]
>UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
           RepID=C4V6K7_NOSCE
          Length = 1091

 Score =  156 bits (394), Expect = 9e-37
 Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
           +K++E R+V+   +L +V         K   + +MVRR+++   +    +D+D+ GNKR 
Sbjct: 284 NKLEEVRNVIVEKILPNVKFDGVDLRNKGIMICLMVRRLIFTQKNIITEEDKDFIGNKRF 343

Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
           ELAG LLS+LFED FK+ N ++KR  D +L+K  RA +FD      ++T+ IT  ++ A+
Sbjct: 344 ELAGQLLSILFEDSFKKFNWELKRSIDKILTKRLRAQEFDALTFFNLQTNIITTSMQRAI 403

Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           SSGNW +RRFRM+R GVT VL R S+I+A+GMMT++ S FEKTRKVSGPR
Sbjct: 404 SSGNWNLRRFRMDRSGVTHVLIRHSYISAVGMMTKVNSHFEKTRKVSGPR 453

[160][TOP]
>UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
           RepID=A2E3T5_TRIVA
          Length = 1142

 Score =  155 bits (392), Expect = 1e-36
 Identities = 75/164 (45%), Positives = 114/164 (69%)
 Frame = +2

Query: 17  EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
           + R+ L  +VL H+P     F +K  +V  M R +L + +DP  ID RD++GNKRLELAG
Sbjct: 311 KGREFLRSMVLPHIPSTLTDFRRKSVFVGFMTRWLLLSAIDPRMIDGRDFFGNKRLELAG 370

Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
            LL LLFEDLFK  N+ +++     ++K+      ++A+A+ ++TIT+GL+ A+SSGNW 
Sbjct: 371 ELLELLFEDLFKTFNASMQKTVSRTINKSKGIDPSNIAQAMHSETITHGLKYAISSGNWN 430

Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           I RF+M R GV+Q+L R+S++  + M+TR++S FEKT+KV+G R
Sbjct: 431 ITRFKMMRAGVSQLLGRMSYLQFVSMVTRISSHFEKTQKVAGAR 474

[161][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5K7V0_9ALVE
          Length = 1159

 Score =  155 bits (391), Expect = 2e-36
 Identities = 84/159 (52%), Positives = 112/159 (70%), Gaps = 15/159 (9%)
 Frame = +2

Query: 77  FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256
           F+ K  ++ +M+RR L A  D   +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+
Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386

Query: 257 QADAVLSK---------ANRATQF------DVAKAIRTDTITYGLESALSSGNWIIRRFR 391
             D  L+K         A R+T        DV + I ++ IT G+  A+SSGNW I+RFR
Sbjct: 387 SVDMRLTKFFQQTSSARAGRSTVGLDSGYPDVLRDIDSERITRGMNRAISSGNWNIKRFR 446

Query: 392 MERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           ++R GV+QVLSR SFIAA+G MTR+ SQFEK+RK++GPR
Sbjct: 447 IDRSGVSQVLSRFSFIAALGAMTRVKSQFEKSRKLAGPR 485

[162][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
           RepID=Q4MYU5_THEPA
          Length = 1244

 Score =  154 bits (390), Expect = 2e-36
 Identities = 78/177 (44%), Positives = 125/177 (70%), Gaps = 11/177 (6%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           +++  D+L+ V+L H+P+   + F+ KI  +++M  R+L  V +   +DD+D+YGNKRLE
Sbjct: 380 LEDTHDILSRVLLSHIPMKDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 439

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337
           LAG ++S+LFED +K+  S++K+  +++L          +K   +   D+   + TD IT
Sbjct: 440 LAGQMISILFEDFYKKFLSNMKKSIESILVKYLEANPNPAKGENSNFPDIFGLMPTDIIT 499

Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+  SQFEK RKVSGPR
Sbjct: 500 NGMQNAIATGNWNIKRFRMEKSGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 556

[163][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
           RepID=B6AC47_9CRYT
          Length = 1219

 Score =  154 bits (389), Expect = 3e-36
 Identities = 85/182 (46%), Positives = 118/182 (64%), Gaps = 16/182 (8%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
           +++  + L  VVL HV         K   + +M RR++ A  + + +DD+DYYGNKR+EL
Sbjct: 360 IEDVLETLNRVVLSHVGTIYGDLRPKALILCLMARRVIDASENQSLLDDKDYYGNKRIEL 419

Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSK-------ANRATQF---------DVAKAIR 322
           AG L+S+LFEDLFKR  S  K+Q D  L +       +++ T           D  + + 
Sbjct: 420 AGQLISILFEDLFKRFASLTKKQIDQTLVRYFQTKDNSSKVTSGKEDTNSNYPDCFRNLP 479

Query: 323 TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSG 502
           TD IT G+++ALS+GNW I+RFRMER G+TQVLSR S+I+A+G+MTR+ SQFEK RKVSG
Sbjct: 480 TDIITRGMQTALSTGNWSIKRFRMERSGMTQVLSRYSYISALGIMTRVDSQFEKARKVSG 539

Query: 503 PR 508
           PR
Sbjct: 540 PR 541

[164][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
           RepID=Q4UB41_THEAN
          Length = 1244

 Score =  152 bits (385), Expect = 9e-36
 Identities = 76/177 (42%), Positives = 125/177 (70%), Gaps = 11/177 (6%)
 Frame = +2

Query: 11  VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           +++  D+L+ V+L H+P+   + F+ KI  +++M  R+L  V +   +DD+D+YGNKRLE
Sbjct: 379 IEDTHDILSRVLLSHIPMRDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 438

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337
           LAG ++S+LFED +K+  +++K+  ++++          +K   +   D+   + TD IT
Sbjct: 439 LAGQMISILFEDFYKKFLNNMKKSIESIIVKYLESNPNPTKGENSNFPDIFGLMPTDIIT 498

Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+  SQFEK RKVSGPR
Sbjct: 499 NGMQNAIATGNWNIKRFRMEKTGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 555

[165][TOP]
>UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
           RepID=B7XI25_ENTBH
          Length = 1107

 Score =  147 bits (372), Expect = 3e-34
 Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 6/175 (3%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQF----AQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
           K K D+ +++    +L     P  +       K   + +M+R+++ A  +    DD+DY 
Sbjct: 278 KLKSDDNKEIKVKSILAEKLFPNIKIDDDLKNKGICLCLMIRKLILAKQNLLKPDDKDYL 337

Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYG 343
           GNKR ELAG LLS+LFED FK+ N ++K+  D +LSK  R  +FD      ++T +IT  
Sbjct: 338 GNKRFELAGQLLSILFEDTFKKFNFELKKSIDKILSKRIRTNEFDALTFFNLQTGSITTT 397

Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           L  A+SSGNW ++RF+MER GVT VL+R S+I A+GMMT++ S FEKTRKVSGPR
Sbjct: 398 LSRAISSGNWNLKRFKMERSGVTHVLTRYSYITALGMMTKINSHFEKTRKVSGPR 452

[166][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5KAB2_9ALVE
          Length = 1140

 Score =  138 bits (347), Expect = 2e-31
 Identities = 77/150 (51%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
 Frame = +2

Query: 77  FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256
           F+ K  ++ +M+RR L A  D   +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+
Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386

Query: 257 QADAVLSKANRATQFDVAKAIRTDTITYGLESAL------SSGNWIIRRFRMERKGVTQV 418
             D  L+K      F    + R    T GL+S        ++GN  I+RFR++R GV+QV
Sbjct: 387 SVDMRLTKF-----FQQTSSARAGRSTVGLDSGYPDVLLRATGN--IKRFRIDRSGVSQV 439

Query: 419 LSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           LSR SFIAA+G MTR+ SQFEK+RK++GPR
Sbjct: 440 LSRFSFIAALGAMTRVKSQFEKSRKLAGPR 469

[167][TOP]
>UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP
          Length = 1100

 Score =  124 bits (312), Expect = 3e-27
 Identities = 59/142 (41%), Positives = 97/142 (68%)
 Frame = +2

Query: 83  QKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQA 262
           +K  ++++MV+++   +  P   D++DYYGNKRL LAG L+S+LFED F++   +  +  
Sbjct: 320 EKGIFLSLMVKKIFSNLNQPMITDNKDYYGNKRLGLAGNLVSILFEDFFRKTLKEGYKYY 379

Query: 263 DAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIA 442
               +K  +    ++   +R D IT GLE + S+GNWI+++ ++E+ GVTQ LSRLSFI+
Sbjct: 380 KLNSTKLKKNQHLELISFLRQDIITNGLEYSFSTGNWIVKKLKIEKNGVTQTLSRLSFIS 439

Query: 443 AMGMMTRMTSQFEKTRKVSGPR 508
           ++ ++T++TSQ EK RK+ GPR
Sbjct: 440 SISIVTKITSQNEKIRKIRGPR 461

[168][TOP]
>UniRef100_Q98S96 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
           RepID=Q98S96_GUITH
          Length = 1049

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/160 (38%), Positives = 103/160 (64%)
 Frame = +2

Query: 29  VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
           +L+H+++   PV   Q  +K  ++ +M+R++LYA+  P  +D +DYYGNKRLEL+G L+ 
Sbjct: 286 ILSHIIVNKNPVS--QNLEKGIFMTMMIRKLLYALQIPDLLDSKDYYGNKRLELSGDLVE 343

Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388
           +L EDL  +   + K+  +    + N          I++D I+YG+E+A  +GNW I ++
Sbjct: 344 ILLEDLLHKSWIESKKFIEKKKIEVNETIYHHF---IKSDFISYGIENAFITGNWKINKY 400

Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
            +++ G+TQ+LSRLSF+++  M+ + +S FEKTRK   PR
Sbjct: 401 GIDKNGITQILSRLSFMSSFSMLLKTSSNFEKTRKSISPR 440

[169][TOP]
>UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
           RepID=C6LZ34_GIALA
          Length = 1239

 Score =  121 bits (304), Expect = 2e-26
 Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 4/155 (2%)
 Frame = +2

Query: 56  VPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKR 235
           V + R+ +  K  Y+A MVRR +         D +D+ GNK++E AG LL L+F+D FK 
Sbjct: 408 VNMARFNWLPKAVYLATMVRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKT 467

Query: 236 LNSDIKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK 403
           L + + R+ D +L S  NR T    +DV   +    IT    SA+S+GNW I R  ++R 
Sbjct: 468 LLAHMARKVDVILRSDKNRGTDLTNYDVVSLVDPSIITRAFNSAISTGNWKIERIGVDRV 527

Query: 404 GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           GV+QVLSRLS+I+ +G +TR++S F+K  K SGPR
Sbjct: 528 GVSQVLSRLSYISTLGQVTRLSSTFDKAMKSSGPR 562

[170][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
           RepID=A8B2N4_GIALA
          Length = 1238

 Score =  120 bits (301), Expect = 5e-26
 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
 Frame = +2

Query: 68  RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSD 247
           R+ +  K  Y+A M+RR +         D +D+ GNK++E AG LL L+F+D FK L + 
Sbjct: 411 RFNWLPKAVYLATMIRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKTLLAH 470

Query: 248 IKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQ 415
           + R+ D+VL S  NR T    +D+   +    IT    SA+S+GNW I +  ++R GV+Q
Sbjct: 471 MVRKVDSVLRSDRNRGTDLTNYDIVSLVDPSIITRAFNSAISTGNWKIEKIGVDRVGVSQ 530

Query: 416 VLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +LSRLS+I+A+G +TR++S F+K  K SGPR
Sbjct: 531 ILSRLSYISALGQVTRLSSTFDKAMKSSGPR 561

[171][TOP]
>UniRef100_A6RTM3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
           B05.10 RepID=A6RTM3_BOTFB
          Length = 490

 Score =  115 bits (289), Expect = 1e-24
 Identities = 55/101 (54%), Positives = 73/101 (72%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           +S V++A + LA++++ HVPV    F  K  Y+  MVRR+L A+++P  +DDRDY GNKR
Sbjct: 374 RSYVNDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPTLVDDRDYVGNKR 433

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD 304
           LELAG LLSLLFEDLFK+ N+D+K   D VL K NR  +FD
Sbjct: 434 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFD 474

[172][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
           RepID=Q27670_9ANNE
          Length = 859

 Score =  111 bits (278), Expect = 2e-23
 Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A+++L   +L HV +  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 140 EKRIKYAKEILQKEMLPHVGISDFCETRKAYFLGYMVHRLLLAALGRREVDDRDHYGNKR 199

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L+ +I+  A   +   +R   F++  AI+T TIT GL+ +L+
Sbjct: 200 LDLAGPLLAYLFRGLFRNLSKEIRLYAQKFI---DRGKDFNLELAIKTRTITDGLKYSLA 256

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306

[173][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001926137
          Length = 1426

 Score =  110 bits (276), Expect = 4e-23
 Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV    +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 338 EKRIKYAREILQKEMLPHVGTSDFCETKKAYFLGYMVHRILLAALGRRELDDRDHYGNKR 397

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LFK L  +++  A   + K      F +  AI+T TIT GL  +L+
Sbjct: 398 LDLAGPLLAFLFRGLFKNLMKEVRLYAQKFIDKGK---DFKIELAIKTKTITDGLRYSLA 454

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 455 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 504

[174][TOP]
>UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
           RepID=Q27446_ARTSA
          Length = 862

 Score =  110 bits (275), Expect = 5e-23
 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  AR++L   +L HV +  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 142 RIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 201

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG L+SLLF  LFK L  +++  A   +   +R   F++  AI+   IT GL+ +L++G
Sbjct: 202 LAGPLMSLLFRGLFKTLTKEVRMYAQKFI---DRGKDFNIELAIKPKFITDGLKYSLATG 258

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 259 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 306

[175][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5712C
          Length = 1175

 Score =  110 bits (274), Expect = 7e-23
 Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L+
Sbjct: 393 LDLAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[176][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4Q1D7_SCHMA
          Length = 1304

 Score =  110 bits (274), Expect = 7e-23
 Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A+++L    L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 459 EKRIKYAKEILQKETLPHVGVSDFCETRKAYFLGYMVHRLLLAALKRRDVDDRDHYGNKR 518

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +I+  A   + K      F++  AIR+  IT GL+ +L+
Sbjct: 519 LDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGK---DFNLELAIRSQIITDGLKYSLA 575

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 576 TGNWGDQKKANQARPGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 625

[177][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
           RepID=UPI0001B09250
          Length = 1174

 Score =  109 bits (273), Expect = 9e-23
 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   VL HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[178][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001865901
          Length = 1176

 Score =  109 bits (273), Expect = 9e-23
 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  AR++L   +L HV +  Y   +K  ++  +V R+L A L    +DDRD+YGNKRL+
Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL+ +L++G
Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501

[179][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
           RepID=Q6DRH1_DANRE
          Length = 562

 Score =  109 bits (273), Expect = 9e-23
 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   VL HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[180][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
          Length = 1174

 Score =  109 bits (273), Expect = 9e-23
 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   VL HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[181][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3Y5U9_BRAFL
          Length = 1104

 Score =  109 bits (273), Expect = 9e-23
 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  AR++L   +L HV +  Y   +K  ++  +V R+L A L    +DDRD+YGNKRL+
Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL+ +L++G
Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501

[182][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide n=1 Tax=Acyrthosiphon pisum
           RepID=UPI00017937B7
          Length = 1101

 Score =  108 bits (271), Expect = 2e-22
 Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  AR++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[183][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
           RepID=Q7QAK7_ANOGA
          Length = 1175

 Score =  108 bits (271), Expect = 2e-22
 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[184][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
           RepID=Q27548_CRAGI
          Length = 859

 Score =  108 bits (271), Expect = 2e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV V  +   +K  ++  MV R+L A +    +DDRD+YGNKR
Sbjct: 140 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAAIGRREVDDRDHYGNKR 199

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +++  A   +   +R   F++  AI+T  IT GL+ +L+
Sbjct: 200 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 256

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306

[185][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B44D8
          Length = 1175

 Score =  108 bits (270), Expect = 2e-22
 Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  AR++L    L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAREILQKETLPHVGVSDFCETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLARPR 499

[186][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B4CC9
          Length = 1147

 Score =  108 bits (270), Expect = 2e-22
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472

[187][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016DFC9D
          Length = 1045

 Score =  108 bits (270), Expect = 2e-22
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 144 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 203

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 204 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 260

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 261 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 308

[188][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
           nigroviridis RepID=Q4T1Y4_TETNG
          Length = 1217

 Score =  108 bits (270), Expect = 2e-22
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  +FK L  +I+  A   +   +R   F++  AI+T  I+ GL+ +L++G
Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  +++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472

[189][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
           RepID=B0WKE9_CULQU
          Length = 1176

 Score =  108 bits (270), Expect = 2e-22
 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLLKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[190][TOP]
>UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
           confervae-glomeratae RepID=A1YID9_9FUNG
          Length = 886

 Score =  108 bits (270), Expect = 2e-22
 Identities = 56/168 (33%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A D+L   +L HV +  +   +K  +   M+ R+L A L+   +DDRD++G KRL+
Sbjct: 144 RIRYATDILTKEMLPHVSMESHHQTRKAFFFGYMIHRLLLAALERRPLDDRDHFGRKRLD 203

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LLS LF  LF++L +D+ R    ++       +F++A A+++ TIT GL+ +L++G
Sbjct: 204 LAGPLLSSLFRTLFRKLTTDVSRYTKKIVETGG---EFNLAMALKSATITKGLQYSLATG 260

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++F   + GV+QVL+R ++ + +  + R+ +   +  K++ PR
Sbjct: 261 NWGDQKKFMSAKAGVSQVLNRYTYASTLSHLRRLNTPIGRDGKLAKPR 308

[191][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186D6F3
          Length = 1175

 Score =  108 bits (269), Expect = 3e-22
 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMFAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[192][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
           RepID=B7QNH8_IXOSC
          Length = 1142

 Score =  107 bits (268), Expect = 4e-22
 Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  +R++L   +L HV V  +   +K  Y+  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYSREILQKEMLPHVGVSDFCETKKAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG L++ LF  LF+ L  +++  A   +   +R   F++  AI+T  IT GL  +L++G
Sbjct: 395 LAGPLMAFLFRGLFRNLTKEVRMYAQKFI---DRGKDFNLELAIKTRIITDGLRYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL++ + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRVNSPIGRDGKLAKPR 499

[193][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
           discoideum RepID=RPB2_DICDI
          Length = 1170

 Score =  107 bits (268), Expect = 4e-22
 Identities = 58/169 (34%), Positives = 97/169 (57%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR+VL   +L HV V  +   +K  Y   +  R+L A L+   +DDRD++ NKR
Sbjct: 331 EQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYITHRLLLASLERRPLDDRDHFANKR 390

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL  LF  LFK+L  D++      + K     +F  + A+++ TIT GL+ +L+
Sbjct: 391 LDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDK---EFIASSAVKSKTITSGLKYSLA 447

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   +    + GV QVL+RL+F + +  + R+ +   +  K++ PR
Sbjct: 448 TGNWGSSKSGGTKSGVAQVLNRLTFASTLSHLRRLNTPIGREGKLAKPR 496

[194][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
           RepID=UPI000180B7B7
          Length = 1173

 Score =  107 bits (267), Expect = 5e-22
 Identities = 60/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV +  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLSAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +++  A   +   +R   F++  AI+T  IT GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL++ + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRLNSPIGRDGKLAKPR 499

[195][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
           RepID=B4R0H5_DROSI
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[196][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4PTC0_DROYA
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[197][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4N9I3_DROWI
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[198][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4M040_DROVI
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[199][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KDW5_DROMO
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[200][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4K015_DROGR
          Length = 1175

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 394

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 451

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499

[201][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
           RepID=Q298X6_DROPS
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[202][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3P0M0_DROER
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[203][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3LYR3_DROAN
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[204][TOP]
>UniRef100_A1YIC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Smittium culisetae
           RepID=A1YIC7_SMICU
          Length = 899

 Score =  107 bits (267), Expect = 5e-22
 Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L    L HV    +   +K  ++  MV R+L  VL+    DDRD+YG KR
Sbjct: 125 EKRIKYAREILQKEFLPHVGTQPHNETRKTYFLGYMVHRLLQCVLERRDQDDRDHYGRKR 184

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL++LF +LFK++  D+ R     +       +F+++ A++++TIT GL+ +L+
Sbjct: 185 LDLAGPLLAMLFRNLFKKMTRDMTRYLQKCIESRR---EFNLSMALKSNTITAGLKYSLA 241

Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW  ++  M+ R GV QVL+R +F + +  + R  +   +  K++ PR
Sbjct: 242 TGNWGDQKKAMQSRTGVAQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 291

[205][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
           subgroup RepID=RPB2_DROME
          Length = 1176

 Score =  107 bits (267), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LFK L  +++      +   +R   F++  AI+T+ IT GL  +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500

[206][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
           n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[207][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
           (RNA polymerase II subunit B2) (DNA-directed RNA
           polymerase II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
           Tax=Equus caballus RepID=UPI0001795E58
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLQLAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[208][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
           n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
          Length = 951

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[209][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
           Tax=Monodelphis domestica RepID=UPI0000F2D75F
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[210][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
           n=1 Tax=Pan troglodytes RepID=UPI0000E20419
          Length = 1099

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424

[211][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
           RepID=RPB2_HUMAN
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[212][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
          Length = 1099

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424

[213][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
          Length = 1173

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[214][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
          Length = 1179

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[215][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
          Length = 1175

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[216][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
          Length = 1180

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[217][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500

[218][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
          Length = 1180

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[219][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
          Length = 1166

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 328 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 387

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 388 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 444

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 445 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 494

[220][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
          Length = 1182

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 329 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 388

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 389 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 445

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 446 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 495

[221][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
          Length = 1173

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[222][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
          Length = 1162

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[223][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
          Length = 932

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[224][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=UPI00006A01AA
          Length = 927

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[225][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
          Length = 1176

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[226][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
           RepID=UPI0000F3357E
          Length = 1177

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500

[227][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
           Tax=Gallus gallus RepID=UPI00003AD7E4
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[228][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
          Length = 949

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[229][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
           RepID=Q5ZMN9_CHICK
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[230][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[231][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
          Length = 1083

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 242 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 301

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 302 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 358

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 359 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 408

[232][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
          Length = 1167

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 326 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 385

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 386 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 442

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 443 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 492

[233][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
          Length = 1099

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424

[234][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
           RepID=A8MW88_HUMAN
          Length = 1173

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 332 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 391

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 392 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 448

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 449 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 498

[235][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
           RepID=RPB2_MOUSE
          Length = 1174

 Score =  106 bits (265), Expect = 8e-22
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A++VL   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499

[236][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
           RepID=A7SHD8_NEMVE
          Length = 1182

 Score =  106 bits (264), Expect = 1e-21
 Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A+++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+YGNKRL+
Sbjct: 339 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 398

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LF+ L  +++  A   +   +R   F++  A++   IT GL  +L++G
Sbjct: 399 LAGPLLAFLFRGLFRNLMKEVRMYAQKFI---DRGKDFNIELALKPKVITDGLRYSLATG 455

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 456 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPR 503

[237][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
           elegans RepID=RPB2_CAEEL
          Length = 1193

 Score =  105 bits (262), Expect = 2e-21
 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+ GNKR
Sbjct: 339 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 398

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +++  A   +   N+   F +   ++T TIT GL  +L+
Sbjct: 399 LDLAGPLLAFLFRSLFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLTYSLA 455

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL++ A +  + R  S   +  K++ PR
Sbjct: 456 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 505

[238][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
           RepID=A1YID1_9FUNG
          Length = 883

 Score =  105 bits (261), Expect = 2e-21
 Identities = 58/168 (34%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A ++L    L HV    +   +K  +   MV R+L A L+   +DDRD+YG KR++
Sbjct: 140 RIKYATEILQKEFLPHVATEAHTETKKAYFFGYMVHRLLLAALERRDLDDRDHYGKKRMD 199

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL++LF  LF++L  D+ R     +  +NR  +F++  A++++TIT GL+ +L++G
Sbjct: 200 LAGPLLAMLFRMLFRKLTKDVGRYLQKCID-SNR--EFNLTLAVKSNTITNGLKYSLATG 256

Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  ++  M+ R GV+QVL+R +F + +  + R  +   +  K++ PR
Sbjct: 257 NWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 304

[239][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000221AC5
          Length = 1194

 Score =  104 bits (260), Expect = 3e-21
 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+ GNKR
Sbjct: 340 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 399

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +++  A   +   N+   F +   ++T TIT GL  +L+
Sbjct: 400 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 456

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL++ A +  + R  S   +  K++ PR
Sbjct: 457 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 506

[240][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
           RepID=A8XS50_CAEBR
          Length = 1215

 Score =  104 bits (260), Expect = 3e-21
 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L   +L HV V  +   +K  ++  MV R+L A L    +DDRD+ GNKR
Sbjct: 361 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 420

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L+LAG LL+ LF  LF+ L  +++  A   +   N+   F +   ++T TIT GL  +L+
Sbjct: 421 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 477

Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW   ++    R GV+QVL+RL++ A +  + R  S   +  K++ PR
Sbjct: 478 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 527

[241][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1ML14_9CHLO
          Length = 1172

 Score =  103 bits (258), Expect = 5e-21
 Identities = 56/169 (33%), Positives = 97/169 (57%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A+D+L   +L HV V      +K  Y+  +V R+L   L     DDRD++GNKR
Sbjct: 330 EKRIKYAQDILQKELLPHVGVDEECETRKAYYLGYIVHRLLLCALGRRNEDDRDHFGNKR 389

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           ++LAG L+++LF  LF++L  D++      +       +  +  A++  TIT GL+ +L+
Sbjct: 390 MDLAGPLIAILFRQLFRKLTKDVRLYCQRCVDSGK---EIQLTLAVKAKTITSGLKYSLA 446

Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW  +  +  R GV+QVL+RLSF + +  + R+ S   +  K++ PR
Sbjct: 447 TGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSPIGREGKLAKPR 495

[242][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
           RepID=A9UUX4_MONBE
          Length = 1166

 Score =  103 bits (258), Expect = 5e-21
 Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           +V  ARD+L   +L H+ V       K  ++  MV R L A L    +DDRD+YGNKRL+
Sbjct: 325 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 384

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG L++ LF  LFK+L   + R+   V    NR  +F V   +  + +  GL  +L++G
Sbjct: 385 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 441

Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  ++   E R GV+QVL+RL+F + +  + R+ S  ++T K++ PR
Sbjct: 442 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 489

[243][TOP]
>UniRef100_A1YIE5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
           RepID=A1YIE5_MONBE
          Length = 904

 Score =  103 bits (258), Expect = 5e-21
 Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           +V  ARD+L   +L H+ V       K  ++  MV R L A L    +DDRD+YGNKRL+
Sbjct: 148 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 207

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG L++ LF  LFK+L   + R+   V    NR  +F V   +  + +  GL  +L++G
Sbjct: 208 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 264

Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  ++   E R GV+QVL+RL+F + +  + R+ S  ++T K++ PR
Sbjct: 265 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 312

[244][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE4_NEOFR
          Length = 915

 Score =  103 bits (257), Expect = 7e-21
 Identities = 57/164 (34%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
 Frame = +2

Query: 20  ARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGG 199
           A ++L   +L H+    +   +K  +   M+ R+L A L+    DDRD++G KRL+LAG 
Sbjct: 151 AAEILQKELLPHIGTKAHTETKKAYFFGYMIHRLLLAALERRECDDRDHFGKKRLDLAGP 210

Query: 200 LLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWII 379
           LL  LF  LF++L SD+ +     +   +R  +F++  AIR +TIT GL+ +L++GNW  
Sbjct: 211 LLGSLFRMLFRKLTSDVSKSLQKCI---DRNREFNLNVAIRPNTITDGLKYSLATGNWGA 267

Query: 380 R-RFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           + +F   R GV+QVL+R +F + +  + R+ +   +  K++ PR
Sbjct: 268 QSKFMQSRAGVSQVLNRYTFASTLSHLRRLNTPIGRDGKLAKPR 311

[245][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID6_ALLMA
          Length = 896

 Score =  103 bits (257), Expect = 7e-21
 Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A D+L   +L H+ +      +K  ++  MV R+L A L    +DDRD++G KRL+
Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF   F++L  D+ R     +    R  +F++  AI ++TIT GL  AL++G
Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++F   R GV+QVL+R +F + +  + R+ +   +  K++ PR
Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300

[246][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID5_ALLMA
          Length = 867

 Score =  103 bits (257), Expect = 7e-21
 Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A D+L   +L H+ +      +K  ++  MV R+L A L    +DDRD++G KRL+
Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF   F++L  D+ R     +    R  +F++  AI ++TIT GL  AL++G
Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252

Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW   ++F   R GV+QVL+R +F + +  + R+ +   +  K++ PR
Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300

[247][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
           RepID=Q6RYG8_9BASI
          Length = 931

 Score =  103 bits (256), Expect = 9e-21
 Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
 Frame = +2

Query: 8   KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
           ++  A ++L   +L H+ +   Q  +K  +   MV R+L A LD   +DDRD++G KRL+
Sbjct: 145 RLQYAEEILQKEMLPHISMSEGQQGKKAYFFGYMVHRLLLAALDRRDLDDRDHFGKKRLD 204

Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
           LAG LL+ LF  LF++L  D+ R     +        F++  A++++TIT GL+ +L++G
Sbjct: 205 LAGPLLASLFRILFRKLTKDVYRHLQKCVEMQK---PFNLNAAVKSNTITNGLKYSLATG 261

Query: 368 NWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           NW  ++  M+ K GV+QVL+R +F + +  + R  +   +  K++ PR
Sbjct: 262 NWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 309

[248][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
           cuniculi RepID=RPB2_ENCCU
          Length = 1141

 Score =  103 bits (256), Expect = 9e-21
 Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  A+D+LA  VL H+    +   +K  ++  +V+R+L   L     DDRD+YG KR
Sbjct: 305 EKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKR 364

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           ++L+G LL+ LF  LFK+L  D  R     +       +F++A  ++   IT G   AL+
Sbjct: 365 MDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGR---EFNIALGLKASIITQGFRYALA 421

Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW  +   M+ R GV QVL+R +F++ +  + R+ +  EK  K++ PR
Sbjct: 422 TGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPR 471

[249][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
           RepID=Q27826_EUPOC
          Length = 1194

 Score =  102 bits (255), Expect = 1e-20
 Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
           + ++  AR++L    L HV       +QK  ++  M  R+L A L     DDRD+YG KR
Sbjct: 359 EERIRHAREILKRHFLPHVSTKDSCESQKSYFIGYMCHRLLNAHLGRIKEDDRDHYGKKR 418

Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
           L++AG LL +LF +LF+R    +K     + ++A++    ++ KA + D I+ GL+ AL+
Sbjct: 419 LDMAGSLLGMLFRNLFRRF---VKEAGRYLKAQADKGDSLNITKAFKKDIISDGLKYALA 475

Query: 362 SGNWIIRRF-RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           +GNW       + + GV+QVL+RL+F + +  + R+ +  +K+ K++ PR
Sbjct: 476 TGNWGTNAAGEVSKTGVSQVLNRLTFASTLSHLRRLNTPLQKSGKLTKPR 525

[250][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
           Tax=Gallus gallus RepID=UPI0000ECC4A8
          Length = 1176

 Score =  102 bits (253), Expect = 2e-20
 Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAV-MVRRMLYAVLDPACIDDRDYYGNK 178
           + ++  A++VL   +L HV V  +   +K  ++   MV R+L A L    +DDRD+YGNK
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYYMVHRLLLAALGRRELDDRDHYGNK 393

Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358
           RL+LAG LL+ LF  +FK L  +++  A   +   +R   F++  AI+T  I+ GL+ +L
Sbjct: 394 RLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSL 450

Query: 359 SSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
           ++GNW   ++    R GV+QVL+RL+F + +  + R+ S   +  K++ PR
Sbjct: 451 ATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501