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[1][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IY03_CHLRE
Length = 1161
Score = 330 bits (847), Expect = 3e-89
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR
Sbjct: 315 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 374
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS
Sbjct: 375 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 434
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR
Sbjct: 435 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 483
[2][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FIF0_9CHLO
Length = 1159
Score = 266 bits (681), Expect = 5e-70
Identities = 129/169 (76%), Positives = 152/169 (89%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+SKVDEARD+LA VVL HVPVP Y F QK YVA+M+RR+L+A++DP +DD+DYYGNKR
Sbjct: 325 RSKVDEARDILAGVVLAHVPVPAYDFRQKCVYVAIMIRRILHAMVDPTQVDDKDYYGNKR 384
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S
Sbjct: 385 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 444
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 445 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493
[3][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RS40_OSTLU
Length = 1146
Score = 263 bits (672), Expect = 5e-69
Identities = 129/169 (76%), Positives = 151/169 (89%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+S+VDEARD+LA VVL HVPV Y F QK AY+++MVRR+L A+LDP IDD+DYYGNKR
Sbjct: 311 RSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQIDDKDYYGNKR 370
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S
Sbjct: 371 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 430
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 431 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 479
[4][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01FH9_OSTTA
Length = 2569
Score = 262 bits (669), Expect = 1e-68
Identities = 127/169 (75%), Positives = 151/169 (89%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+S++DEARD+LA VVL HVPV Y F QK AY+++MVRR+L A+LDP +DD+DYYGNKR
Sbjct: 341 RSRIDEARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRILNALLDPTQVDDKDYYGNKR 400
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S
Sbjct: 401 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 460
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 461 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 509
[5][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N4K3_9CHLO
Length = 1197
Score = 257 bits (657), Expect = 3e-67
Identities = 127/169 (75%), Positives = 150/169 (88%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+++VDEARD+LA VVL HVPV Y F K AYVAVM+RR+L+A++D IDD+DYYGNKR
Sbjct: 363 RNRVDEARDILAGVVLAHVPVVAYDFRGKCAYVAVMIRRILHAMIDRTQIDDKDYYGNKR 422
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S
Sbjct: 423 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 482
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 483 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 531
[6][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RNX6_PHYPA
Length = 1135
Score = 235 bits (599), Expect = 1e-60
Identities = 115/169 (68%), Positives = 143/169 (84%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K +VDEARD+LA VVL HVPV ++ F K Y+AV++R+ML A+L+ +DD DY GNKR
Sbjct: 288 KVRVDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKR 347
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFKR+N+++K+ DA LSKANR+TQFD+ K IR DT+T GLE A+S
Sbjct: 348 LELAGQLLSLLFEDLFKRMNAELKKSMDATLSKANRSTQFDIIKLIRPDTLTNGLEHAIS 407
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RF+M+RKGVTQV+SRLSFIAA+G MTR++SQFEKTRKVSGPR
Sbjct: 408 SGNWAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPR 456
[7][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8BQM2_THAPS
Length = 1108
Score = 225 bits (574), Expect = 1e-57
Identities = 111/168 (66%), Positives = 134/168 (79%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S DEARDV A+VVL HVPV + F K Y+ +VRR++ L + +DD+DYYGNKRL
Sbjct: 269 SPEDEARDVFANVVLSHVPVVNFDFHAKTIYIGHIVRRLVMVQLGKSSLDDKDYYGNKRL 328
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
ELAG LLSLLFEDLFK N+D+K+Q D VLSK NRA FDV K IR D+I YG+ SA+SS
Sbjct: 329 ELAGSLLSLLFEDLFKHFNTDLKKQTDMVLSKPNRAQAFDVIKTIRPDSIAYGMMSAISS 388
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW+++RFRM+R GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 389 GNWVLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 436
[8][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVD4_PHATR
Length = 1211
Score = 221 bits (563), Expect = 2e-56
Identities = 110/168 (65%), Positives = 134/168 (79%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S DEAR+VLA+VVL HVPV + F +K Y+ +VRR+L L +DD+DYYGNKRL
Sbjct: 351 SPEDEAREVLANVVLSHVPVTHFDFREKALYIGHIVRRVLLVHLGKMPLDDKDYYGNKRL 410
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
ELAG LLSLLFEDLFK N D+KRQAD VLSK NR FDV K IR DTIT G+ +A+++
Sbjct: 411 ELAGNLLSLLFEDLFKIFNKDLKRQADLVLSKPNRTQAFDVVKTIRPDTITNGMINAIAT 470
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW+++RFRM+R GVTQVLSRLS+++A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 471 GNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPR 518
[9][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
Length = 1608
Score = 218 bits (556), Expect = 1e-55
Identities = 104/169 (61%), Positives = 135/169 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K +EARD+LA VVL HVPV RY F K+ Y+++M+RR++ A D +C+DD+DYYGNKR
Sbjct: 317 KTKSEEARDILAGVVLNHVPVRRYNFRLKVIYLSLMIRRIIMASKDKSCLDDKDYYGNKR 376
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
+EL+G L+SLLFED FK+ S++K+ D ++KANRA D+ K IRTDTIT G A+S
Sbjct: 377 IELSGQLISLLFEDCFKKFQSELKKSVDQAIAKANRAENLDLPKLIRTDTITNGFTHAIS 436
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SG W ++RFRMER GV+QVLSRLS+I+ MGMMTR+ SQFEKTRKV+GPR
Sbjct: 437 SGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFEKTRKVAGPR 485
[10][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7Q0E7_IXOSC
Length = 1141
Score = 216 bits (550), Expect = 7e-55
Identities = 109/169 (64%), Positives = 134/169 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ VD+ARD+LA VL HVPV Y F K Y+A+M+RR++ A + IDDRDYYGNKR
Sbjct: 311 KTPVDDARDILATTVLAHVPVEHYNFRVKAMYLALMIRRVIEAQTNREMIDDRDYYGNKR 370
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFKR N+++K AD + K RATQFDV K +R D IT GL S++S
Sbjct: 371 LELAGSLLSLLFEDLFKRFNTELKLVADKTIPKV-RATQFDVVKYVRQDLITNGLVSSIS 429
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+MER GVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 430 TGNWTVKRFKMERIGVTQVLTRLSYISALGMMTRVNSQFEKTRKVSGPR 478
[11][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q416_ANOGA
Length = 1089
Score = 216 bits (549), Expect = 9e-55
Identities = 109/169 (64%), Positives = 134/169 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ DEARD+LA +L HVPVP + F K YVA+M+RR++ A LD + +DDRDYYGNKR
Sbjct: 297 KTTADEARDLLATTILAHVPVPSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 356
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSL+FEDLFKR N ++K AD + K +A QFDV K +R IT GLE+A+S
Sbjct: 357 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDVGKHMREALITAGLETAIS 415
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 416 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464
[12][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A103B
Length = 1122
Score = 214 bits (546), Expect = 2e-54
Identities = 110/169 (65%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR
Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472
[13][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00004DA04E
Length = 1136
Score = 214 bits (546), Expect = 2e-54
Identities = 110/169 (65%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR
Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472
[14][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=B2GUR3_XENTR
Length = 1134
Score = 214 bits (546), Expect = 2e-54
Identities = 110/169 (65%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR
Sbjct: 304 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 362
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 363 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 421
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 422 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 470
[15][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4S7G7_TETNG
Length = 1171
Score = 212 bits (539), Expect = 1e-53
Identities = 107/169 (63%), Positives = 139/169 (82%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR
Sbjct: 331 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 389
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 390 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 448
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 449 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 497
[16][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
Length = 1130
Score = 211 bits (538), Expect = 2e-53
Identities = 107/169 (63%), Positives = 138/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR
Sbjct: 300 KTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 358
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 359 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 417
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 418 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 466
[17][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q28ZV6_DROPS
Length = 1137
Score = 211 bits (537), Expect = 2e-53
Identities = 107/169 (63%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EARD+L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPAEEARDLLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[18][TOP]
>UniRef100_B0WCT6 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus
RepID=B0WCT6_CULQU
Length = 928
Score = 211 bits (537), Expect = 2e-53
Identities = 106/169 (62%), Positives = 133/169 (78%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ DEARD+LA +L HVPV + F K YVA+M+RR++ A LD + +DDRDYYGNKR
Sbjct: 302 KTTADEARDLLATTILAHVPVNNFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSL+FEDLFKR N ++K AD + K +A QFD+ K +R I+ GLE+A+S
Sbjct: 362 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDIVKHMRAALISTGLETAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 421 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 469
[19][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
RepID=UPI0001560749
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[20][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B
isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[21][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
norvegicus RepID=UPI0000503D79
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[22][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[23][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
RepID=UPI0000F339C2
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[24][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[25][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
Length = 1075
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 245 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 303
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 304 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 362
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 363 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 411
[26][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
Length = 838
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 8 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 66
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 67 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 125
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 126 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 174
[27][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
RepID=RPC2_MOUSE
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[28][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
RepID=RPC2_HUMAN
Length = 1133
Score = 211 bits (536), Expect = 3e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[29][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E487B4
Length = 830
Score = 210 bits (535), Expect = 4e-53
Identities = 104/169 (61%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KSKVDEAR++LA +L H+PV ++ F K Y+A+MVRR++ A D +DDRDYYGNKR
Sbjct: 319 KSKVDEARELLATTILAHIPVVQFNFRAKSIYLALMVRRVIEAQGDAVKVDDRDYYGNKR 378
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L++LLFEDLFK+ NS++K+ AD + + RA QFD+ K +R D IT GL +A+S
Sbjct: 379 LELAGQLIALLFEDLFKKFNSELKKYADQNIPRP-RAAQFDIVKYMRQDQITNGLITAIS 437
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+MER GVTQVLSRLS+I+ +GMMTR++SQFEKTRKVSGPR
Sbjct: 438 TGNWSVKRFKMERAGVTQVLSRLSYISCLGMMTRISSQFEKTRKVSGPR 486
[30][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Ornithorhynchus anatinus
RepID=UPI000155CB1A
Length = 1113
Score = 210 bits (534), Expect = 5e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 283 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 341
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 342 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 400
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 401 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 449
[31][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Monodelphis domestica
RepID=UPI00005EAC23
Length = 1133
Score = 210 bits (534), Expect = 5e-53
Identities = 107/169 (63%), Positives = 137/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[32][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA
n=1 Tax=Tribolium castaneum RepID=UPI0000D56081
Length = 1122
Score = 209 bits (533), Expect = 7e-53
Identities = 109/169 (64%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ VDEARDVLA VL HVPV Y F K Y+ VMV+R++ A D +DD+DYYGNKR
Sbjct: 294 KTPVDEARDVLATTVLAHVPVENYNFRMKAIYLGVMVKRVIEAQSDKKFMDDKDYYGNKR 353
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSL+FED+FKR N ++K A+ + K RATQFDV K +R+D IT L A+S
Sbjct: 354 LELAGSLLSLMFEDVFKRFNWELKSIAEKTIPKI-RATQFDVVKYMRSDLITNCLVYAIS 412
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW I+RFRMER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 413 TGNWTIKRFRMERLGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 461
[33][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MR22_DROWI
Length = 999
Score = 209 bits (533), Expect = 7e-53
Identities = 107/169 (63%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EARD+L +L HVPV + F K YVA+MVRR++ A LD DDRDYYGNKR
Sbjct: 171 KTPPEEARDLLMTTILAHVPVDNFNFQMKAIYVALMVRRVMAAELDKTLFDDRDYYGNKR 230
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 231 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 289
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEK+RKVSGPR
Sbjct: 290 SGNWTIKRFKMERGGVTQVLSRLSYISALGMMTRVNSQFEKSRKVSGPR 338
[34][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4GGQ4_DROPE
Length = 1137
Score = 209 bits (533), Expect = 7e-53
Identities = 106/169 (62%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[35][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MH37_DROAN
Length = 1137
Score = 209 bits (533), Expect = 7e-53
Identities = 106/169 (62%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[36][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F57
Length = 1132
Score = 209 bits (532), Expect = 9e-53
Identities = 106/169 (62%), Positives = 138/169 (81%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468
[37][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LKV4_DROVI
Length = 1137
Score = 209 bits (532), Expect = 9e-53
Identities = 106/169 (62%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[38][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4J5G6_DROGR
Length = 1137
Score = 209 bits (532), Expect = 9e-53
Identities = 106/169 (62%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLMSLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[39][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KPU7_DROMO
Length = 1136
Score = 209 bits (531), Expect = 1e-52
Identities = 106/169 (62%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[40][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31AA
Length = 1153
Score = 207 bits (526), Expect = 4e-52
Identities = 104/169 (61%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR
Sbjct: 326 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 384
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LL FEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 385 LELAGQLLPFFFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 443
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 444 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 492
[41][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P5Q3_DROYA
Length = 1137
Score = 206 bits (525), Expect = 6e-52
Identities = 105/169 (62%), Positives = 130/169 (76%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[42][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
RepID=B4QC69_DROSI
Length = 1137
Score = 206 bits (525), Expect = 6e-52
Identities = 105/169 (62%), Positives = 130/169 (76%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[43][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NS93_DROER
Length = 1137
Score = 206 bits (525), Expect = 6e-52
Identities = 105/169 (62%), Positives = 130/169 (76%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[44][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
melanogaster RepID=RPC2_DROME
Length = 1137
Score = 206 bits (525), Expect = 6e-52
Identities = 105/169 (62%), Positives = 130/169 (76%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR
Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S
Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476
[45][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Ciona intestinalis
RepID=UPI000180BF5A
Length = 1141
Score = 206 bits (524), Expect = 7e-52
Identities = 103/169 (60%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+SK DE RD L +L H+PV + + K Y+A+M+RR++ L +DDRDYYGNKR
Sbjct: 304 QSKTDETRDWLNTTLLAHIPVTDWNYHAKAVYLALMIRRIILTQLGYLEVDDRDYYGNKR 363
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
+ELAGGL+SLLFEDLFKR NS++K+ AD + K RA QFDV + +R D IT L A+S
Sbjct: 364 MELAGGLISLLFEDLFKRFNSELKKIADLTIPKP-RAAQFDVVRHMRQDLITTSLVIAIS 422
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNWI++RF+MERKGVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 423 SGNWIVKRFKMERKGVTQVLTRLSYISALGMMTRIASQFEKTRKVSGPR 471
[46][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194E18E
Length = 1280
Score = 205 bits (521), Expect = 2e-51
Identities = 105/169 (62%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR
Sbjct: 450 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 508
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 509 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 567
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 568 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 616
[47][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
Length = 1126
Score = 205 bits (521), Expect = 2e-51
Identities = 105/169 (62%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR
Sbjct: 296 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 354
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 355 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 413
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 414 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 462
[48][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Gallus gallus
RepID=UPI0000ECD29F
Length = 1132
Score = 205 bits (521), Expect = 2e-51
Identities = 105/169 (62%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 360
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 468
[49][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YYC3_BRAFL
Length = 1137
Score = 204 bits (519), Expect = 3e-51
Identities = 102/169 (60%), Positives = 135/169 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+++V+EAR+VL +L HVPV ++ F K Y+A+MVRR++ A +DDRDYYGNKR
Sbjct: 293 RTRVEEAREVLHSTILAHVPVVKFNFRLKCVYLALMVRRVVQAQAQDR-VDDRDYYGNKR 351
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LL+LLFEDLFK+ N+++K+ AD + K RA QFD+ K +R D IT GL +A+S
Sbjct: 352 LELAGQLLALLFEDLFKKFNAELKKIADQTIPKP-RAAQFDIVKHMRQDQITNGLVNAIS 410
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 411 TGNWTVKRFKMDRAGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 459
[50][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Nasonia vitripennis
RepID=UPI00015B53C8
Length = 1127
Score = 204 bits (518), Expect = 4e-51
Identities = 105/168 (62%), Positives = 129/168 (76%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S DE +DVLA +L HVPV + F K Y+A+MVR+++ A D +DDRDYYGNKRL
Sbjct: 298 SITDEMKDVLASNILSHVPVIDFNFKLKATYLALMVRKVMIAQTDGKLVDDRDYYGNKRL 357
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
ELAG LL+L+FEDLFKR N D+K AD + K +A QFD+ K +R D+IT GL A+SS
Sbjct: 358 ELAGSLLALMFEDLFKRFNWDLKTIADKNIPKI-KAAQFDIVKHMRHDSITNGLAVAISS 416
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 417 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464
[51][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31A9
Length = 1132
Score = 203 bits (516), Expect = 6e-51
Identities = 103/169 (60%), Positives = 136/169 (80%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 360
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG + LL EDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQVSLLLCEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468
[52][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
Length = 1134
Score = 202 bits (514), Expect = 1e-50
Identities = 103/168 (61%), Positives = 128/168 (76%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S DE +D LA +L HVPV + F K Y+A+M+R+++ A D +DDRDYYGNKRL
Sbjct: 304 SITDEMKDALATNILSHVPVIDFNFKMKATYIALMIRKVMKAQSDGKLVDDRDYYGNKRL 363
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
ELAG LLSL+FEDLFKR N ++K+ AD + K +A QFD+ K +R D IT GL A+SS
Sbjct: 364 ELAGSLLSLMFEDLFKRFNWELKQIADKNIPKI-KAAQFDIVKHMRQDQITNGLAFAISS 422
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR
Sbjct: 423 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 470
[53][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JW67_SCHJY
Length = 1160
Score = 202 bits (513), Expect = 1e-50
Identities = 104/167 (62%), Positives = 127/167 (76%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
+EA +VLA VVL H+ V F K YVA+M RR+L A++DP+ +DDRDY GNKRLELA
Sbjct: 327 EEALEVLAAVVLAHISVVNLDFRPKAVYVAMMARRVLMAMVDPSQVDDRDYVGNKRLELA 386
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367
G LL+LLFEDLFK+ NSD+K D VL K NR +FD ++ D IT G+ ALS+G
Sbjct: 387 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPNRTQEFDAYNQLSMHGDHITQGMVRALSTG 446
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER GVT VLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 447 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493
[54][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PBR7_USTMA
Length = 1169
Score = 201 bits (510), Expect = 3e-50
Identities = 104/167 (62%), Positives = 123/167 (73%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
+EA DVLA V++ HVPV R F K Y+A MVRR+L A+ D +DDRDY GNKRLELA
Sbjct: 331 EEALDVLATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMQDEKKVDDRDYVGNKRLELA 390
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESALSSG 367
G LLSLLFEDLFK+ NSD+K D VL K NR +FD D IT G A+S+G
Sbjct: 391 GQLLSLLFEDLFKKFNSDLKMNIDKVLKKPNRTVEFDAFNQFHFNGDYITSGFVRAISTG 450
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER G+T VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 451 NWSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 497
[55][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F58
Length = 1118
Score = 200 bits (509), Expect = 4e-50
Identities = 102/168 (60%), Positives = 134/168 (79%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR
Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S
Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505
+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRK P
Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKSDTP 467
[56][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
Length = 1165
Score = 198 bits (503), Expect = 2e-49
Identities = 100/167 (59%), Positives = 126/167 (75%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
+EA +VLA VVL H+ V +F K Y+ +M RR+L A++DP +DDRDY GNKRLELA
Sbjct: 332 EEALEVLAAVVLAHINVFNLEFRPKAVYIGIMARRVLMAMVDPLQVDDRDYVGNKRLELA 391
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367
G LL+LLFEDLFK+ NSD+K D VL K +R +FD + +D IT G+ ALS+G
Sbjct: 392 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPHRTQEFDAYNQLTVHSDHITQGMVRALSTG 451
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER GVT VLSRLS+I+A+GMMTR+TSQFEKTRKVSGPR
Sbjct: 452 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKVSGPR 498
[57][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V2W9_MONBE
Length = 1097
Score = 197 bits (502), Expect = 3e-49
Identities = 102/169 (60%), Positives = 127/169 (75%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++K D RD+L+ VVL HVP + F K ++++MVRR++ ++ D DDRDY GNKR
Sbjct: 284 RTKEDMGRDLLSSVVLAHVPCENFDFRAKAVFLSLMVRRVIISMGDKMT-DDRDYLGNKR 342
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG L+SLLFED FK N+ +KRQAD LSK NR FD +R D IT L +A+S
Sbjct: 343 LELAGSLMSLLFEDTFKNFNAQLKRQADVNLSK-NRVAAFDATNFMREDIITNSLRNAIS 401
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SGNWI++RF+MER GVT VLSRLSFIA++GMMTR+TSQFEKTRKVSGPR
Sbjct: 402 SGNWILKRFKMERHGVTSVLSRLSFIASLGMMTRITSQFEKTRKVSGPR 450
[58][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M3E3_ENTHI
Length = 1122
Score = 195 bits (496), Expect = 1e-48
Identities = 97/169 (57%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ K++EARDVLA++VL H+ V RY F KI Y+A+MV +L A + +DD+DYYGNKR
Sbjct: 297 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYIALMVNWILKAD-ETGELDDKDYYGNKR 355
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
+ELAG L+SLLFEDLFK+ N+D++ A+ L+K +R+ FD+ K I IT GL +LS
Sbjct: 356 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 415
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 416 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 464
[59][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVW9_MALGO
Length = 1131
Score = 195 bits (495), Expect = 2e-48
Identities = 99/167 (59%), Positives = 124/167 (74%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
DEA +VLA V++ HVPV + F K Y+A MVRR+L ++D + +DDRDY GNKRLELA
Sbjct: 303 DEALEVLATVIMAHVPVEQGDFRNKTMYIATMVRRVLVCMVDESKVDDRDYVGNKRLELA 362
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSG 367
G LL+LLFEDLFK+ N D+K D VL K NR ++FD D IT G A+S+G
Sbjct: 363 GQLLALLFEDLFKKFNFDLKTNIDKVLKKPNRTSEFDAYNQFFYHGDYITAGFVRAISTG 422
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 423 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469
[60][TOP]
>UniRef100_B0EDI3 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0EDI3_ENTDI
Length = 1115
Score = 194 bits (494), Expect = 2e-48
Identities = 97/169 (57%), Positives = 131/169 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ K++EARDVLA++VL H+ V RY F KI Y+A+MV +L A + +DD+DYYGNKR
Sbjct: 316 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYLALMVNWILKAD-ETGELDDKDYYGNKR 374
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
+ELAG L+SLLFEDLFK+ N+D++ A+ L+K +R+ FD+ K I IT GL +LS
Sbjct: 375 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 434
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 435 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 483
[61][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EEL3_SCLS1
Length = 1230
Score = 194 bits (493), Expect = 3e-48
Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + +A + LA++++ HVPV F K Y+ MVRR+L A+++P +DDRDY GNKR
Sbjct: 391 RNYIGDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPKLVDDRDYVGNKR 450
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
LELAG LLSLLFEDLFK+ N+D+K D VL K NR +FD +++ + IT G+ A
Sbjct: 451 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFDAYNHMQSHGNYITIGMNRA 510
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 511 ISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 561
[62][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMI5_ASPFC
Length = 1200
Score = 194 bits (492), Expect = 4e-48
Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA QFD ++ ++ IT G+ A
Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533
[63][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D510_NEOFI
Length = 1200
Score = 194 bits (492), Expect = 4e-48
Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA QFD ++ ++ IT G+ A
Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533
[64][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CN89_ASPTN
Length = 1219
Score = 193 bits (490), Expect = 6e-48
Identities = 100/171 (58%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + +A V++ H+ V F K YVA M RR+L A DP +DDRDY GNKR
Sbjct: 381 RTHVQEAIEAIASVIISHIEVKNMNFRPKAIYVAHMARRVLMAKNDPTLVDDRDYLGNKR 440
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ T+ IT G+ A
Sbjct: 441 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWSVMSMHTNHITQGMNRA 500
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 501 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551
[65][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V2J8_PHANO
Length = 1443
Score = 192 bits (489), Expect = 8e-48
Identities = 99/166 (59%), Positives = 124/166 (74%), Gaps = 2/166 (1%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
EA + LA+VVL HVPV + K YVA+M RR+L A+ DP +DDRDY GNKRLEL+G
Sbjct: 622 EAIECLANVVLPHVPVEGTNYRPKALYVALMARRVLMAMQDPKLVDDRDYVGNKRLELSG 681
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370
+LSLLFED FKR N D K D VL K NRA +FD ++ + IT G+E A+++GN
Sbjct: 682 QMLSLLFEDHFKRFNHDFKLSIDKVLKKQNRAQEFDAFSHFSVHKNHITMGIERAIATGN 741
Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 742 WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 787
[66][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HTA4_PENCW
Length = 1208
Score = 192 bits (489), Expect = 8e-48
Identities = 101/171 (59%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ V EA + +A V++ H+ V F K YVA M RR+L A DPA +DDRDY GNKR
Sbjct: 371 KTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKR 430
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
LELAG +L+LLFEDLFK+ DIK D VL+K NRA QFD + + IT G+ A
Sbjct: 431 LELAGQMLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRA 490
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 491 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 541
[67][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
RepID=C0PUS9_SALSA
Length = 814
Score = 191 bits (486), Expect = 2e-47
Identities = 96/152 (63%), Positives = 124/152 (81%)
Frame = +2
Query: 53 HVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFK 232
HVPV + F K Y+AVMVRR++ A + +DDRDYYGNKRLELAG LLSLLFEDLFK
Sbjct: 1 HVPVKEFNFRAKCIYLAVMVRRVILAQGENK-VDDRDYYGNKRLELAGQLLSLLFEDLFK 59
Query: 233 RLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVT 412
+ NS++K+ +D ++ K RA QFD+ K +R D IT G+ +A+S+GNW ++RF+M+R+GVT
Sbjct: 60 KFNSELKKISDQIIPK-QRAAQFDIVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVT 118
Query: 413 QVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
QVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 119 QVLSRLSFISALGMMTRISSQFEKTRKVSGPR 150
[68][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2URF4_ASPOR
Length = 1180
Score = 191 bits (486), Expect = 2e-47
Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 342 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 401
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ ++ IT G+ A
Sbjct: 402 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 461
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 462 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 512
[69][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MYG2_ASPFN
Length = 1218
Score = 191 bits (486), Expect = 2e-47
Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 380 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 439
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ ++ IT G+ A
Sbjct: 440 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 499
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 500 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 550
[70][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CS37_ASPCL
Length = 1246
Score = 190 bits (483), Expect = 4e-47
Identities = 98/171 (57%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 409 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 468
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ + IT G+ A
Sbjct: 469 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAWSVMSMHGNHITQGMNRA 528
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579
[71][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CEE6_YARLI
Length = 1169
Score = 190 bits (482), Expect = 5e-47
Identities = 93/166 (56%), Positives = 122/166 (73%), Gaps = 2/166 (1%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
E + +A ++ H+ + F +K Y+AVM RR++ A+ DP IDDRDY GNKRLELAG
Sbjct: 331 EGLEAVATSIIAHISINNMDFTEKALYIAVMTRRVIMAMADPKMIDDRDYVGNKRLELAG 390
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSGN 370
LLSLLFEDLFK+ NSD K D +L + NRA+ FD + T +IT G+ A+S+GN
Sbjct: 391 QLLSLLFEDLFKKFNSDFKANIDKILKRPNRASMFDALLNLETHRGSITSGMNRAISTGN 450
Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 451 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 496
[72][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1HBD0_PARBA
Length = 1205
Score = 190 bits (482), Expect = 5e-47
Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 367 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 426
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 427 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 486
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 487 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 537
[73][TOP]
>UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GLZ2_PARBD
Length = 1209
Score = 190 bits (482), Expect = 5e-47
Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579
[74][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SI08_PARBP
Length = 1232
Score = 190 bits (482), Expect = 5e-47
Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579
[75][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DLE5_PICGU
Length = 1156
Score = 190 bits (482), Expect = 5e-47
Identities = 92/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A+M RR+L + +P +DDRDY GNKRL
Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +RA++FD + I ++ IT G+ A+
Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGMNRAI 437
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487
[76][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RUZ7_DEBHA
Length = 1165
Score = 189 bits (481), Expect = 7e-47
Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A M RR+L + +P +DDRDY GNKRL
Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +RA++FD + I ++ IT GL A+
Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGLNRAI 442
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492
[77][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E0Z1_LODEL
Length = 1157
Score = 189 bits (481), Expect = 7e-47
Identities = 93/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A+M RR++ A+ +P +DDRDY GNKRL
Sbjct: 319 SQLQEGIEAIATTIVAHLTVSNLQFKEKAFYMAMMARRVVMAMHNPKMVDDRDYVGNKRL 378
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +R T+FD + I ++ IT GL A+
Sbjct: 379 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTTEFDALLSINIHSNNITMGLNRAI 438
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 439 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 488
[78][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B156
Length = 1156
Score = 189 bits (480), Expect = 9e-47
Identities = 92/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A+M RR+L + +P +DDRDY GNKRL
Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +RA +FD + I ++ IT G+ A+
Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGMNRAI 437
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487
[79][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JTE0_AJEDS
Length = 1204
Score = 189 bits (480), Expect = 9e-47
Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 366 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 425
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 426 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 485
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 486 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 536
[80][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GKN6_AJEDR
Length = 1228
Score = 189 bits (480), Expect = 9e-47
Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 390 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 449
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 450 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 509
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 510 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 560
[81][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R793_PICPG
Length = 1158
Score = 189 bits (480), Expect = 9e-47
Identities = 92/166 (55%), Positives = 125/166 (75%), Gaps = 2/166 (1%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
E + +A+ ++ H+ V F +K Y+A+M RR++ A+ +P IDDRDY GNKRLELAG
Sbjct: 328 EGVEAIANTIVAHISVEDLNFREKAIYLAIMTRRVVMAMHNPTMIDDRDYVGNKRLELAG 387
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSGN 370
L+SLLFEDLFK+ NSD K D +L K NRA++FD +I ++ IT G+ A+S+GN
Sbjct: 388 QLMSLLFEDLFKKFNSDFKANIDKILKKPNRASEFDALLSINVHSNNITTGINRAISTGN 447
Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 448 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 493
[82][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0P0A1_AJECG
Length = 1227
Score = 189 bits (480), Expect = 9e-47
Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 559
[83][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R9I0_AJECN
Length = 1186
Score = 189 bits (480), Expect = 9e-47
Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 357 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 416
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 417 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 476
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 477 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 527
[84][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2Q8V9_ASPNC
Length = 1225
Score = 189 bits (480), Expect = 9e-47
Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + +A V++ H+ V F K YVA M RR+L A D + +DDRDY GNKR
Sbjct: 387 RTHVQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKR 446
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD I ++ IT G+ A
Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRA 506
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557
[85][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE866
Length = 1165
Score = 189 bits (479), Expect = 1e-46
Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A M RR+L + +P +DDRDY GNKRL
Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +RA +FD + I ++ IT GL A+
Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGLNRAI 442
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492
[86][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
RepID=B9Q403_TOXGO
Length = 1324
Score = 189 bits (479), Expect = 1e-46
Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR
Sbjct: 459 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 518
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + +
Sbjct: 519 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 578
Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 579 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 638
Query: 500 GPR 508
GPR
Sbjct: 639 GPR 641
[87][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PFT5_TOXGO
Length = 1328
Score = 189 bits (479), Expect = 1e-46
Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR
Sbjct: 463 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 522
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + +
Sbjct: 523 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 582
Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 583 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 642
Query: 500 GPR 508
GPR
Sbjct: 643 GPR 645
[88][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KDI3_TOXGO
Length = 1332
Score = 189 bits (479), Expect = 1e-46
Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR
Sbjct: 467 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 526
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319
LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + +
Sbjct: 527 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 586
Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS
Sbjct: 587 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 646
Query: 500 GPR 508
GPR
Sbjct: 647 GPR 649
[89][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KC33_CRYNE
Length = 1129
Score = 189 bits (479), Expect = 1e-46
Identities = 99/167 (59%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
D A+ LA +VL HVPV F K Y+A M RR+L A++D +DDRDY GNKRLELA
Sbjct: 309 DIAQQALAAMVLGHVPVRNMNFRPKCIYLATMARRVLMAMIDDHMVDDRDYVGNKRLELA 368
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
G LLSLLFED FK NS++K++ D +L K NRA FD IR D IT ++S+G
Sbjct: 369 GQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTG 428
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF +ER GVT VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 429 NWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 475
[90][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q59M52_CANAL
Length = 1157
Score = 189 bits (479), Expect = 1e-46
Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489
[91][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WLY1_CANDC
Length = 1157
Score = 189 bits (479), Expect = 1e-46
Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFKEKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489
[92][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M3E6_CANTT
Length = 1159
Score = 188 bits (478), Expect = 2e-46
Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL
Sbjct: 321 SQLQEGIEAIATTIVAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 380
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+
Sbjct: 381 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 440
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 441 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 490
[93][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HGH3_AJECH
Length = 1227
Score = 188 bits (477), Expect = 2e-46
Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A
Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GM+TR++SQFEKTRKVSGPR
Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMLTRISSQFEKTRKVSGPR 559
[94][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NJT3_COPC7
Length = 1140
Score = 188 bits (477), Expect = 2e-46
Identities = 97/167 (58%), Positives = 123/167 (73%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
+EA + LA +VL HVPV F K +VA M RR+L A+ D + +DDRDY GNKRLELA
Sbjct: 314 EEALEALATIVLAHVPVQGLDFRAKAIFVATMTRRVLMAMDDESMVDDRDYVGNKRLELA 373
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
G LL+LLFEDLFK NS++K D VL K +R ++FD ++ D +T G A+S+G
Sbjct: 374 GQLLALLFEDLFKTYNSNLKSAIDKVLKKPSRTSEFDAFNTMQMQGDHLTSGFVRAISTG 433
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 434 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 480
[95][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TQC8_VANPO
Length = 1139
Score = 188 bits (477), Expect = 2e-46
Identities = 95/170 (55%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S + E + +A V+ H+ V F +K YVA+M RR++ A+ +P +DDRDY GNKRL
Sbjct: 311 SILQEGIEAIATTVIAHLTVEALDFREKALYVAMMARRVVMAMHNPKMVDDRDYVGNKRL 370
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D VL K NRA ++D +I ++ IT GL A+
Sbjct: 371 ELAGQLISLLFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAI 430
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 431 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 480
[96][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
(AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
nidulans RepID=C8VU19_EMENI
Length = 1225
Score = 187 bits (475), Expect = 3e-46
Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + +A V++ H+ V F K YVA M RR+L A D A +DDRDY GNKR
Sbjct: 387 RTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVANMARRVLMAKNDAALVDDRDYLGNKR 446
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL+K NR FD I ++ IT G+ A
Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRVEAFDAWSVIGMHSNHITQGMNRA 506
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557
[97][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q75B52_ASHGO
Length = 1141
Score = 187 bits (474), Expect = 5e-46
Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
+ E + +A V+ H+ V F +K YVA+M RR++ A+ +P +DDRDY GNKRLEL
Sbjct: 315 LQEGIEAIATTVIAHLTVEALDFREKALYVAMMTRRVIMAIHNPKMVDDRDYVGNKRLEL 374
Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
AG L+SLLFEDLFK+ N+D K D VL K NRA +D +I ++ IT GL A+S+
Sbjct: 375 AGQLMSLLFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAIST 434
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 435 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 482
[98][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DEU3_LACTC
Length = 1144
Score = 187 bits (474), Expect = 5e-46
Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S + E + +A V+ H+ V F +K Y+AVM RR++ A+ +P +DDRDY GNKRL
Sbjct: 316 STLQEGIEAIATTVIAHLTVEALDFREKALYIAVMTRRVVMAMHNPKMVDDRDYVGNKRL 375
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ I+ GL A+
Sbjct: 376 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAMEYDALLSINVHSNNISSGLNRAI 435
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 436 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 485
[99][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D7Q0_LACBS
Length = 1142
Score = 187 bits (474), Expect = 5e-46
Identities = 97/167 (58%), Positives = 122/167 (73%), Gaps = 2/167 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
+EA + LA +VL HVPV F K +VA M RR+L A+ D +DDRDY GNKRLELA
Sbjct: 316 EEALEALATIVLAHVPVNGLDFRSKAIFVATMTRRVLMAMQDENMVDDRDYVGNKRLELA 375
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367
G LL+LLFEDLFK NS++K D VL K +R ++FD ++ D +T G A+S+G
Sbjct: 376 GQLLALLFEDLFKTYNSNLKIAIDKVLKKPSRTSEFDAYNTMQMQGDHLTSGFVRAISTG 435
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 482
[100][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LP81_PICST
Length = 1155
Score = 187 bits (474), Expect = 5e-46
Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S + E + +A V+ H+ V QF +K Y+A M RR++ + +P +DDRDY GNKRL
Sbjct: 320 SVLQEGIEAIATTVIAHITVADLQFREKALYIATMARRVVMTMHNPKMVDDRDYVGNKRL 379
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ NSD K D +L K +R ++FD + I ++ IT GL A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAI 439
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489
[101][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC2_YEAST
Length = 1149
Score = 187 bits (474), Expect = 5e-46
Identities = 93/168 (55%), Positives = 124/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
+ E + +A V+ H+ V F +K Y+A+M RR++ A+ +P IDDRDY GNKRLEL
Sbjct: 320 LQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLEL 379
Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
AG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+S+
Sbjct: 380 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 439
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487
[102][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SHS2_RICCO
Length = 1139
Score = 186 bits (473), Expect = 6e-46
Identities = 94/167 (56%), Positives = 129/167 (77%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K + A +L V L +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLE
Sbjct: 304 KENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLE 363
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK + ++++R D VL+K NR+++FD+A+ I D IT GLE LS+G
Sbjct: 364 LSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTG 423
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
N+ ++RF+M RKG+TQVL RLS+IA++GMMTR++ QFEK+RKVSGPR
Sbjct: 424 NFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPR 470
[103][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IDF9_POPTR
Length = 1141
Score = 186 bits (472), Expect = 8e-46
Identities = 93/167 (55%), Positives = 129/167 (77%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K + A +L V + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLE
Sbjct: 300 KENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLE 359
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK + +++++ AD +L K NR+++FD ++ I D+IT GLE ALS+G
Sbjct: 360 LSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTG 419
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++RFRM RKGVTQVL RLS++A++G MTR++ QFEK+RKVSGPR
Sbjct: 420 NWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPR 466
[104][TOP]
>UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W234_PYRTR
Length = 1167
Score = 186 bits (471), Expect = 1e-45
Identities = 96/166 (57%), Positives = 123/166 (74%), Gaps = 2/166 (1%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
EA + L++VVL HVPV + K YVA+M RR+L A+ +P +DDRDY GNKRLEL+G
Sbjct: 386 EAIECLSNVVLPHVPVEGTNYRPKALYVALMARRVLMAMQNPKLVDDRDYVGNKRLELSG 445
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370
+LSLLFED FKR N D K D VL K RA +FD ++ + IT G+E A+++GN
Sbjct: 446 QMLSLLFEDHFKRFNHDFKLSIDKVLKKPVRAQEFDAFSHFSVHKNHITMGVERAIATGN 505
Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 506 WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551
[105][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHY2_NECH7
Length = 1156
Score = 185 bits (470), Expect = 1e-45
Identities = 94/171 (54%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V+E D LA++V+ HVP+ F K YVA+M R++L A +P +DDRD+ GNKR
Sbjct: 315 RNHVEEGLDALANLVIAHVPIEELDFYPKAIYVAMMTRKVLMAAHNPKLVDDRDFVGNKR 374
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
LELAG LLSLLFEDLFKR ++K D L K NRA D I +TI G+ A
Sbjct: 375 LELAGQLLSLLFEDLFKRFTVEVKMSIDKFLKKNNRAVPLDAVHMISNHANTIGIGINRA 434
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 435 IQTGNWSVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485
[106][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y486_CLAL4
Length = 1159
Score = 185 bits (470), Expect = 1e-45
Identities = 89/170 (52%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++ E + +A V+ H+ V F +K Y+A+M R++L + +P+ +DDRDY GNKRL
Sbjct: 320 SQLQEGIEAIATTVIAHLTVSDLNFREKALYIAIMARKVLMTMHNPSMVDDRDYVGNKRL 379
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ N+D K D +L K +R ++FD + I ++ IT G+ A+
Sbjct: 380 ELAGQLMSLLFEDLFKKFNTDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGMNRAI 439
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489
[107][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMP0_UNCRE
Length = 1202
Score = 185 bits (470), Expect = 1e-45
Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + EA + +A V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 364 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 423
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A
Sbjct: 424 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 483
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 484 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 534
[108][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E0C8
Length = 1157
Score = 185 bits (469), Expect = 2e-45
Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V+E D LA++V+ HVP+ F K YVA+M RR+L A +P +DDRD+ GNKR
Sbjct: 315 RNHVEEGLDALANLVIAHVPIEGLDFYPKAIYVAMMTRRVLIAAHNPKLVDDRDFVGNKR 374
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
LELAG LLSLLFEDLFK+ ++++ D L K NRA D I + I YG+ A
Sbjct: 375 LELAGQLLSLLFEDLFKQFTTNVRMSIDKFLKKNNRAVPLDAVNMISNHANNIGYGINRA 434
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 435 IQTGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485
[109][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FLJ9_CANGA
Length = 1133
Score = 185 bits (469), Expect = 2e-45
Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
+ E + +A ++ H+ V F +K Y+A M RR++ A+ +P +DDRDY GNKRLEL
Sbjct: 308 LQEGIEAIATTIIAHLTVEALDFREKALYIATMTRRVVMAMHNPKMVDDRDYVGNKRLEL 367
Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364
AG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+S+
Sbjct: 368 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 427
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 428 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 475
[110][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CLR1_KLULA
Length = 1142
Score = 185 bits (469), Expect = 2e-45
Identities = 92/170 (54%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S + E + +A V+ H+ V F +K Y+A+M RR++ A+ +P +DDRDY GNKRL
Sbjct: 314 SILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAIDNPKMVDDRDYVGNKRL 373
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ N+D K D VL K NRA +D I ++ IT G+ A+
Sbjct: 374 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAEMYDALLTINVHSNNITTGMNRAI 433
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 434 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 483
[111][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FVS4_NANOT
Length = 1211
Score = 185 bits (469), Expect = 2e-45
Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ V EA + ++ V++ HV V F K YV M RR+L A LDP+ +DDRDY GNKR
Sbjct: 373 RNYVAEAIEAISSVIISHVQVQDMNFRPKALYVTYMARRVLMAKLDPSLVDDRDYVGNKR 432
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A
Sbjct: 433 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRA 492
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+++GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 IATGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543
[112][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q27492_CAEEL
Length = 1154
Score = 184 bits (468), Expect = 2e-45
Identities = 96/167 (57%), Positives = 121/167 (72%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K EA D L++ ++ H+ P F K Y+ +M RR++ L +DDRD+YGNKRLE
Sbjct: 317 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGLMTRRLIQTELGENGLDDRDFYGNKRLE 376
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LLSLLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G
Sbjct: 377 LAGSLLSLLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 435
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 436 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 482
[113][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
Length = 1104
Score = 184 bits (467), Expect = 3e-45
Identities = 94/164 (57%), Positives = 120/164 (73%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
EA D L+++++ HVP P K Y+ +MVRR++ A + DDRD+YGNKRLELAG
Sbjct: 301 EAIDFLSNLMIAHVPCPDGNMKMKAVYLGLMVRRLMQAEVGDTECDDRDFYGNKRLELAG 360
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT L AL++GNW
Sbjct: 361 SLLALLFEDVFKRFNSELKRIADNSLGKT-LAAPLDIVKHVRQDLITNALVDALATGNWT 419
Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
I+RF+MER+GVTQVLSRLS+I+ +GMMTR+ S FEKTRKVSGPR
Sbjct: 420 IKRFKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPR 463
[114][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186CFA7
Length = 1137
Score = 183 bits (465), Expect = 5e-45
Identities = 95/170 (55%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K+ VD+A D+LA+ +L HV V ++ +K Y+ +MVRR+L A DP D D+YGNK
Sbjct: 306 KNVVDDAGDILANTILAHVDVLDFRCMCEKTQYLGLMVRRILQAETDPRFYTDLDHYGNK 365
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358
RLELAG +L LLFED KR N ++K AD ++ K +A QFD+ K +R D IT G +A+
Sbjct: 366 RLELAGAMLGLLFEDFLKRYNLELKMIADKMIPKI-KAAQFDIVKHLRQDFITNGFSNAI 424
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW I+RFRM +GVTQVLSRLS+I+A GMMTR+ S FEKTRKVSGPR
Sbjct: 425 STGNWTIKRFRMHTQGVTQVLSRLSYISAFGMMTRVNSHFEKTRKVSGPR 474
[115][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q9P6E7_NEUCR
Length = 1155
Score = 183 bits (465), Expect = 5e-45
Identities = 93/171 (54%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ +E D LA++V+ HV V F K Y+A+MVRR+L A +P +DDRD+ GNKR
Sbjct: 316 RNHAEEGLDALANLVIAHVTVEGLDFYPKAVYIAMMVRRVLMAAQNPKLVDDRDFVGNKR 375
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD--TITYGLESA 355
LELAG L+SLLFEDLFK+ SD+K D K NR + +D AI + I++GL A
Sbjct: 376 LELAGQLISLLFEDLFKKFISDVKYNIDNFFKKPNRTSTYDPHGAIMANGHYISHGLNRA 435
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ SGNW ++RF M R G+T VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQSGNWTVKRFNMNRAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486
[116][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5DY85_ZYGRC
Length = 1143
Score = 183 bits (465), Expect = 5e-45
Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S + E + +A V+ H+ V F +K Y+A+M RR++ A+ + +DDRDY GNKRL
Sbjct: 315 SVLQEGIEAIATTVIAHLTVAALDFREKALYIAMMTRRVVMAMQNYKMVDDRDYVGNKRL 374
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358
ELAG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+
Sbjct: 375 ELAGQLISLLFEDLFKKFNNDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLSRAI 434
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR
Sbjct: 435 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 484
[117][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MJE1_TALSN
Length = 1212
Score = 182 bits (463), Expect = 9e-45
Identities = 98/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ ++EA + ++ VV+ HV V F K YVA M RR+L A DP+ +DDRDY GNKR
Sbjct: 374 KTHIEEAIEAISSVVISHVEVTNMDFRPKAIYVANMARRVLMAKHDPSMVDDRDYVGNKR 433
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK VL K R FD A+ + IT+G+ A
Sbjct: 434 LELAGQLLALLFEDLFKKFCFDIKMNITKVLGKRRREI-FDAMSVVALHGNHITHGMNRA 492
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543
[118][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
pisum RepID=UPI00017918AB
Length = 1112
Score = 182 bits (462), Expect = 1e-44
Identities = 89/166 (53%), Positives = 120/166 (72%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
+ E D L+ V+L H+PV + K Y ++MVRR+++++ +P D +DYYGNK L+L
Sbjct: 288 ITEVHDFLSTVILAHIPVTNTNYHMKAIYTSIMVRRLIFSLSNPDLFDSKDYYGNKCLDL 347
Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGN 370
G LSLLF+D FKR ++K AD + K +AT FD+ K IRTDTIT L A+ +GN
Sbjct: 348 PGSFLSLLFDDTFKRFTFELKSVADKNIPKV-KATPFDIIKYIRTDTITNALVFAIQTGN 406
Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
W I+RFRMER GVTQVL+RLS+++A+GMMTR+ SQFEK+RKVSGPR
Sbjct: 407 WSIKRFRMERHGVTQVLTRLSYLSAIGMMTRVNSQFEKSRKVSGPR 452
[119][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
Length = 1233
Score = 182 bits (462), Expect = 1e-44
Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ + EA + +A V++ HV V F K YVA M RR+L A D + +DDRDY GNKR
Sbjct: 395 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKR 454
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A
Sbjct: 455 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 514
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 515 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 565
[120][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4R1B6_MAGGR
Length = 1158
Score = 182 bits (462), Expect = 1e-44
Identities = 93/171 (54%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ +E + LA++++ HVP+ F K YVA+MVRR+L A D +DDRD+ GNKR
Sbjct: 318 RNNAEEGLEALANMIIGHVPILDLDFYPKACYVAMMVRRVLMAAHDHKLVDDRDFVGNKR 377
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDT--ITYGLESA 355
LELAG +LSLLFEDLFK+ D++ D VL K+NR FD +I + IT G+ A
Sbjct: 378 LELAGQMLSLLFEDLFKKFLVDLRFNIDKVLRKSNRGVAFDPLNSITATSGHITAGMNRA 437
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+SSGNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 438 ISSGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 488
[121][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
RepID=B6VBN7_CAEBE
Length = 1152
Score = 182 bits (461), Expect = 1e-44
Identities = 95/167 (56%), Positives = 120/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K EA D L++ ++ H+ P F K Y+ M RR++ L +DDRD+YGNKRLE
Sbjct: 316 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTELGENELDDRDFYGNKRLE 375
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G
Sbjct: 376 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 434
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 435 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 481
[122][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
Length = 1105
Score = 181 bits (460), Expect = 2e-44
Identities = 91/171 (53%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ ++E D L+++++ H+PV F K YVA M RR+L A + + +DDRD+ GNKR
Sbjct: 316 KNNIEEGMDALSNLIIAHIPVEGLDFYPKAIYVAFMTRRVLMAQANMSLVDDRDFVGNKR 375
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355
LELAG LLSLLFEDLFK+ D+K D VL K NRA D I + I G+ A
Sbjct: 376 LELAGQLLSLLFEDLFKKFCGDVKASIDKVLKKDNRAVAMDAVTMISNHANNIGQGINRA 435
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ +GNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQTGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 486
[123][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8WJV6_CAEBR
Length = 1160
Score = 181 bits (459), Expect = 2e-44
Identities = 94/167 (56%), Positives = 120/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K EA D L++ ++ H+ P F K Y+ M RR++ + +DDRD+YGNKRLE
Sbjct: 302 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTEMGENELDDRDFYGNKRLE 361
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G
Sbjct: 362 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 420
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR
Sbjct: 421 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 467
[124][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7QMF0_VITVI
Length = 1146
Score = 180 bits (456), Expect = 6e-44
Identities = 86/160 (53%), Positives = 125/160 (78%)
Frame = +2
Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
+L + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLEL+G L+S
Sbjct: 303 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 362
Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388
LLFEDLFK + S++K+ DA+L+K +R+++FD ++ I D+IT GLE LS+GNW ++RF
Sbjct: 363 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLSTGNWDVKRF 422
Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
RM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR
Sbjct: 423 RMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 462
[125][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985A70
Length = 1142
Score = 177 bits (450), Expect = 3e-43
Identities = 86/163 (52%), Positives = 126/163 (77%), Gaps = 3/163 (1%)
Frame = +2
Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
+L + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLEL+G L+S
Sbjct: 308 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 367
Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIR---TDTITYGLESALSSGNWII 379
LLFEDLFK + S++K+ DA+L+K +R+++FD ++ +R D+IT GLE LS+GNW +
Sbjct: 368 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDV 427
Query: 380 RRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+RFRM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR
Sbjct: 428 KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 470
[126][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QHR9_PENMQ
Length = 1212
Score = 177 bits (449), Expect = 4e-43
Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+ ++EA + ++ V++ HV V F K YVA M RR+L A D +DDRDY GNKR
Sbjct: 374 KTHIEEAIEAISSVIISHVEVTDMDFRPKAIYVANMARRVLMAKHDSDMVDDRDYVGNKR 433
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
LELAG LL+LLFEDLFK+ DIK VL K R FD + + IT+G+ A
Sbjct: 434 LELAGQLLALLFEDLFKKFQFDIKMNITKVLGKRRREI-FDAMSVVTLHGNHITHGMNRA 492
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543
[127][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
Length = 1161
Score = 176 bits (445), Expect = 1e-42
Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K A +L + L HVPVP F QK YV VM+RRM+ A+L+ +DD+DY GNKRLE
Sbjct: 311 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 370
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358
L+G L+SLLFEDLFK + S+ + D +L+K RA++FD ++ + D +I+ GLE L
Sbjct: 371 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 430
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR
Sbjct: 431 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 480
[128][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FKF1_ARATH
Length = 1194
Score = 176 bits (445), Expect = 1e-42
Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K A +L + L HVPVP F QK YV VM+RRM+ A+L+ +DD+DY GNKRLE
Sbjct: 332 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 391
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358
L+G L+SLLFEDLFK + S+ + D +L+K RA++FD ++ + D +I+ GLE L
Sbjct: 392 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 451
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR
Sbjct: 452 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 501
[129][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GW04_CHAGB
Length = 1155
Score = 175 bits (444), Expect = 1e-42
Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+S V+E D LA++++ HV + F K Y+++MVRR+L A +P +DDRD+ GNKR
Sbjct: 316 RSPVEEGLDALANIIIAHVTIKDLDFYPKSIYISMMVRRVLMAAHNPRLVDDRDFVGNKR 375
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
LELAG LLSLLFED+FK +K + K NR + +D I + IT GL A
Sbjct: 376 LELAGQLLSLLFEDMFKMFVGGLKGNMEYFFKKPNRTSAYDPVGPISSQGQYITQGLNRA 435
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 436 IQSGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486
[130][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus
RepID=UPI000179EFE0
Length = 796
Score = 175 bits (443), Expect = 2e-42
Identities = 90/134 (67%), Positives = 113/134 (84%)
Frame = +2
Query: 107 MVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN 286
MVRR++ A D +DDRDYYGNKRLELAG LLSLLFEDLFK+ NS++K+ AD V+ K
Sbjct: 1 MVRRVILAQGDNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-Q 58
Query: 287 RATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 466
RA QFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR+
Sbjct: 59 RAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRI 118
Query: 467 TSQFEKTRKVSGPR 508
+SQFEKTRKVSGPR
Sbjct: 119 SSQFEKTRKVSGPR 132
[131][TOP]
>UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii
RepID=Q5NVB0_PONAB
Length = 1116
Score = 174 bits (441), Expect = 3e-42
Identities = 94/168 (55%), Positives = 122/168 (72%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR
Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LLSLLF DLFK+ NS++K+ AD V+ K RA QFDV +A+S
Sbjct: 362 LELAGQLLSLLFGDLFKKFNSEMKKIADQVIPK-QRAAQFDVVNTCAKTRSPMAWVNAIS 420
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505
+GNW ++RF+M+R+ V QVL RL +I+A+GMMTR++SQFEKTRKVS P
Sbjct: 421 TGNWSLKRFKMDRQ-VNQVLYRLLYISALGMMTRISSQFEKTRKVSVP 467
[132][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Z6F6_SORBI
Length = 1137
Score = 172 bits (437), Expect = 9e-42
Identities = 90/168 (53%), Positives = 116/168 (69%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
+K + +L V + HVPV K Y AVM+RRML A+L+ DD+DY GNKR
Sbjct: 293 NKEGRSNSILHDVFIAHVPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRF 352
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364
EL+G L+SLLFEDLFK +NS + + K R++ D ++ I DTIT+GLE A+S+
Sbjct: 353 ELSGQLISLLFEDLFKTMNSQAVERMNKNSDKT-RSSPLDFSQLIMQDTITFGLERAIST 411
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GNW I+RFRM RKGV+QVLSRLS++A +G MTR+T QFEKTRK SGPR
Sbjct: 412 GNWDIKRFRMHRKGVSQVLSRLSYMATLGYMTRITPQFEKTRKTSGPR 459
[133][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2B0Z1_PODAN
Length = 1160
Score = 172 bits (435), Expect = 2e-41
Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ ++E D L+++++ HV V F K Y+A+MVRR+L AV +P +DDRD+ GNKR
Sbjct: 321 RNPIEEGLDALSNLIVAHVTVKDLDFYPKTIYIAMMVRRILMAVHNPELVDDRDFVGNKR 380
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355
LELAG LLSLLFEDL K +K + + NR + +D I + IT GL A
Sbjct: 381 LELAGQLLSLLFEDLLKGFIGQLKANMEHFFKRPNRTSAYDPIGPIGSYGTMITQGLNRA 440
Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR
Sbjct: 441 IQSGNWTVKRFGMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 491
[134][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q236N3_TETTH
Length = 1141
Score = 171 bits (434), Expect = 2e-41
Identities = 82/175 (46%), Positives = 124/175 (70%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++ VDEARD++ +VVLCH+P Y + + ++ +M RR++ A+ DP+ ID RDYYGNKR
Sbjct: 290 RNPVDEARDIITNVVLCHIPCKNYNYYPRAIFLGLMARRLIEALDDPSKIDKRDYYGNKR 349
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT------DTITYG 343
++ AG L LLFED FK+ N ++++ + K ++ + + + + D IT G
Sbjct: 350 MKCAGWYLELLFEDKFKQFNMMVRKELSKEIEK-HKNKSYPIKNRVESILEKNHDIITQG 408
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
L +A+S+GNW I+RFRM+ GVTQVL+R+S+IAA+GMMTRM SQF+K+RK++GPR
Sbjct: 409 LNNAISTGNWTIKRFRMDTVGVTQVLARISYIAAIGMMTRMNSQFKKSRKLTGPR 463
[135][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q84R88_ORYSJ
Length = 1174
Score = 171 bits (433), Expect = 3e-41
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE
Sbjct: 331 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 390
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G
Sbjct: 391 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 449
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 450 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 496
[136][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ3_ORYSJ
Length = 1155
Score = 171 bits (433), Expect = 3e-41
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE
Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G
Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477
[137][TOP]
>UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ2_ORYSJ
Length = 1039
Score = 171 bits (433), Expect = 3e-41
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE
Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G
Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477
[138][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9F8X6_ORYSJ
Length = 1115
Score = 171 bits (433), Expect = 3e-41
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE
Sbjct: 372 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 431
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G
Sbjct: 432 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 490
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 491 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 537
[139][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AR02_ORYSI
Length = 1117
Score = 171 bits (433), Expect = 3e-41
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE
Sbjct: 374 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 433
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G
Sbjct: 434 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 492
Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR
Sbjct: 493 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 539
[140][TOP]
>UniRef100_Q2N123 RNA polymerase III second largest subunit (Fragment) n=1
Tax=Leucosolenia sp. AR-2003 RepID=Q2N123_9METZ
Length = 404
Score = 170 bits (430), Expect = 6e-41
Identities = 85/149 (57%), Positives = 116/149 (77%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
++KV+EA + LA+++L HVPV + F K AY+A+MVRR+L A D DDRDYYGNKR
Sbjct: 257 RTKVEEALEALANIILAHVPVVEFNFRLKTAYMALMVRRVLQAQGDMESADDRDYYGNKR 316
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
LELAG LL+LLFEDLFK+LN+++K+ AD + +K RA FD+ K +R D IT GL ++S
Sbjct: 317 LELAGQLLALLFEDLFKKLNTELKQFADKMANKP-RAEPFDITKQMRPDIITNGLVHSIS 375
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAM 448
+GNW ++RF+M+R GVTQVLSRLS+I+A+
Sbjct: 376 TGNWSVKRFKMDRAGVTQVLSRLSYISAL 404
[141][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3LB54_PLAKH
Length = 1401
Score = 167 bits (422), Expect = 5e-40
Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 15/184 (8%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK
Sbjct: 510 KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 569
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316
RLELAG L+SLLFEDL+KR +K+Q D LSK ++ T DV ++
Sbjct: 570 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNETYPDVFRS 629
Query: 317 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496
+ D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV
Sbjct: 630 LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 689
Query: 497 SGPR 508
SGPR
Sbjct: 690 SGPR 693
[142][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K0G6_PLAVI
Length = 1427
Score = 166 bits (421), Expect = 6e-40
Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 15/184 (8%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + +DD+DYYGNK
Sbjct: 507 KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDGANNKNELDDKDYYGNK 566
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316
RLELAG L+SLLFEDL+KR +K+Q D LSK ++ T DV ++
Sbjct: 567 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNDTYPDVFRS 626
Query: 317 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496
+ D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV
Sbjct: 627 LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 686
Query: 497 SGPR 508
SGPR
Sbjct: 687 SGPR 690
[143][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=Q6E6F3_ANTLO
Length = 1014
Score = 166 bits (421), Expect = 6e-40
Identities = 87/170 (51%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
S++DEAR +L VVL ++P +K VA+M+R +L A L+ +DD D+ GNKR
Sbjct: 212 SRIDEARTILYEVVLPNIPNDGIDMRRKAITVAIMIRVLLQAELNMISMDDIDFLGNKRF 271
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358
ELAG LLS+LFED F R NS++K+ D VLSK+ R D ++ + I+ A+
Sbjct: 272 ELAGNLLSILFEDTFLRFNSELKKSIDKVLSKSQRTQDLDALTFLNLQVNLISNSFVRAI 331
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW +RRFRMER GVTQVLSRLS+IA +G M ++ SQFEKTRK+SGPR
Sbjct: 332 STGNWTVRRFRMERAGVTQVLSRLSYIAMIGSMAKIQSQFEKTRKISGPR 381
[144][TOP]
>UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD48_SCHMA
Length = 1126
Score = 166 bits (420), Expect = 8e-40
Identities = 86/164 (52%), Positives = 116/164 (70%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
E + L +++ HV + + FA + ++ MVR ++ A ++DRD+YGNKR+ELAG
Sbjct: 284 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPVNDRDFYGNKRIELAG 343
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
LL+LLFED+FK N D+ + +K R T FD+++ I+T IT L A+SSGNWI
Sbjct: 344 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 402
Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR
Sbjct: 403 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 446
[145][TOP]
>UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD47_SCHMA
Length = 1128
Score = 166 bits (419), Expect = 1e-39
Identities = 87/164 (53%), Positives = 115/164 (70%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
E + L +++ HV + + FA + ++ MVR ++ A DDRD+YGNKR+ELAG
Sbjct: 297 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPPDDRDFYGNKRIELAG 356
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
LL+LLFED+FK N D+ + +K R T FD+++ I+T IT L A+SSGNWI
Sbjct: 357 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 415
Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR
Sbjct: 416 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 459
[146][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4D9P5_TRYCR
Length = 1130
Score = 165 bits (418), Expect = 1e-39
Identities = 86/175 (49%), Positives = 116/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
KSK D A + L +V+LCH+ + Q F K YV MVRRM+ A +D + +D+RD+Y
Sbjct: 305 KSKADNAAEFLGNVLLCHIREGQVQRDWNFRHKALYVCFMVRRMIEASVDSSLLDERDFY 364
Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
GNKR E G L+ LLFEDL K+ N +K D LSK + F+V + + + + I G
Sbjct: 365 GNKRFETTGTLMGLLFEDLLKQFNRVVKTAMDQQLSKKDTTKAFNVKQLMESKLEVIQSG 424
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ ALSSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEK+RK+SGPR
Sbjct: 425 MRVALSSGRWELKRFNMSRQGITQVLSRLSYIACIGMMTRLASSFEKSRKISGPR 479
[147][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 165 bits (418), Expect = 1e-39
Identities = 90/177 (50%), Positives = 117/177 (66%), Gaps = 8/177 (4%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
K VDEARD+LA+VVL H+P + +DD+DYYGNKR
Sbjct: 221 KLPVDEARDLLANVVLSHIP---------------------------SILDDKDYYGNKR 253
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN--------RATQFDVAKAIRTDTIT 337
LELAG LL+LLFEDLFK+ NS++K A+ + K R +FD+ K +R D IT
Sbjct: 254 LELAGQLLALLFEDLFKKFNSELKSIAEKNIPKQRAGPVNMNLRFLEFDIVKYMRQDQIT 313
Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
G AL++GNW I+R++M+R GVTQVLSRLS+++A+GMMTR++SQFEKTRKVSGPR
Sbjct: 314 NGFNLALTTGNWSIKRYKMDRAGVTQVLSRLSYLSALGMMTRISSQFEKTRKVSGPR 370
[148][TOP]
>UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HBG9_LEIBR
Length = 1125
Score = 165 bits (418), Expect = 1e-39
Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
+SK D+A + LA+V+LCH+ + Q F K YV MVR M+ A D + +D+RD+Y
Sbjct: 300 RSKADKAAEFLANVLLCHIRESQMQKDWNFRHKAFYVCFMVRGMIEASFDASLLDERDFY 359
Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
GNKR E G L++LLFEDL K+ N +K D LSK + F+V + + + + I G
Sbjct: 360 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSKRDSTRPFNVKQLMESKMEVIQNG 419
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ A+SSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEKTRKVSGPR
Sbjct: 420 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIACLGMMTRLASSFEKTRKVSGPR 474
[149][TOP]
>UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=Q8I5X9_PLAF7
Length = 1450
Score = 164 bits (416), Expect = 2e-39
Identities = 90/185 (48%), Positives = 122/185 (65%), Gaps = 16/185 (8%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + + IDD+DYYGNK
Sbjct: 530 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNEIDDKDYYGNK 589
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF---------------DVAK 313
RLELAG L+SLLFEDL+KR +K+Q D LSK ++ DV +
Sbjct: 590 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYNSKLRSTGNNMNDNYPDVFR 649
Query: 314 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 493
+ D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RK
Sbjct: 650 NLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRK 709
Query: 494 VSGPR 508
VSGPR
Sbjct: 710 VSGPR 714
[150][TOP]
>UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4QD43_LEIMA
Length = 1132
Score = 164 bits (416), Expect = 2e-39
Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
+SK D+A + LA+V+LCH+ + Q F K YV MVR M+ A D + +D+RD+Y
Sbjct: 307 RSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDTSLLDERDFY 366
Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
GNKR E G L++LLFEDL K+ N +K D LS+ + F+V + + + + I G
Sbjct: 367 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSRKDSTRPFNVKQLMESKMEVIQNG 426
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ A+SSG W ++RF M R+G+TQVLSRLS+IA++GMMTR+ S FEKTRKVSGPR
Sbjct: 427 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGPR 481
[151][TOP]
>UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma
brucei RepID=C9ZHX4_TRYBG
Length = 1129
Score = 164 bits (416), Expect = 2e-39
Identities = 85/175 (48%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
KSK D A + LA+V+LCH+ Q F K YV MVRRM+ A +D + +D+RD+Y
Sbjct: 304 KSKADSAAEFLANVLLCHIREGEVQRDWNFRHKALYVCFMVRRMVEASVDSSLLDERDFY 363
Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343
GNKR E G L+ LLFEDL K+ N +K D +LSK + F++ + + + + I G
Sbjct: 364 GNKRFETTGTLMGLLFEDLLKQYNRVVKTAMDQLLSKKDTTKPFNLKQLMESKMEVIQNG 423
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ ALSSG W ++RF M R+G+TQVLSRLS+I+ +GMMTR+ S FEK+RK+SGPR
Sbjct: 424 MRVALSSGRWELKRFNMSRQGITQVLSRLSYISCIGMMTRLASSFEKSRKISGPR 478
[152][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SQY8_ENCCU
Length = 1110
Score = 162 bits (410), Expect = 1e-38
Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
++++E VL+ VL +V + +K Y+A+MVRR+ L+ DD+D+ GNKR
Sbjct: 284 NRIEEVLTVLSEKVLPNVQIEGCDLRKKGIYIALMVRRLAQTKLNILREDDKDFVGNKRF 343
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358
ELAG LLS+LFED FKR N ++K+ D +LSK +RA +FD ++ + IT L A+
Sbjct: 344 ELAGQLLSILFEDTFKRFNFELKKSIDKILSKRSRAQEFDALTFLNLQANMITSTLARAI 403
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
S+GNW ++RFRMER GVT VLSR S+I+A+GMMT++ S FEKTRKVSGPR
Sbjct: 404 STGNWNLKRFRMERSGVTHVLSRHSYISALGMMTKINSHFEKTRKVSGPR 453
[153][TOP]
>UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RNH0_PLAYO
Length = 1323
Score = 162 bits (409), Expect = 2e-38
Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK
Sbjct: 443 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 502
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
RLELAG L+SLLFEDL+KR +K+Q D LSK +++
Sbjct: 503 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 562
Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 563 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 622
Query: 476 FEKTRKVSGPR 508
FEK RKVSGPR
Sbjct: 623 FEKGRKVSGPR 633
[154][TOP]
>UniRef100_Q4YMS1 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
Tax=Plasmodium berghei RepID=Q4YMS1_PLABE
Length = 607
Score = 162 bits (409), Expect = 2e-38
Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK
Sbjct: 329 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 388
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
RLELAG L+SLLFEDL+KR +K+Q D LSK +++
Sbjct: 389 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 448
Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 449 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 508
Query: 476 FEKTRKVSGPR 508
FEK RKVSGPR
Sbjct: 509 FEKGRKVSGPR 519
[155][TOP]
>UniRef100_Q4XDD3 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
Tax=Plasmodium chabaudi RepID=Q4XDD3_PLACH
Length = 432
Score = 162 bits (409), Expect = 2e-38
Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178
K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK
Sbjct: 178 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 237
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301
RLELAG L+SLLFEDL+KR +K+Q D LSK +++
Sbjct: 238 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKMKNNSSVGGNNNFSDNS 297
Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475
DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ
Sbjct: 298 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 357
Query: 476 FEKTRKVSGPR 508
FEK RKVSGPR
Sbjct: 358 FEKGRKVSGPR 368
[156][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CPZ8_CRYPV
Length = 1287
Score = 159 bits (402), Expect = 1e-37
Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 15/183 (8%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
+ +D+ + L V+L H+ K ++ +M +R+L A D + +DD+DYYGNKR+
Sbjct: 417 TSIDDVLETLNRVLLSHIGTIYTDLHPKALFLCLMAKRVLDASEDNSLLDDKDYYGNKRI 476
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVL---------SKA------NRATQFDVAKAI 319
ELAG L+S+LFEDLFKR + K+Q D L SKA + +T D + +
Sbjct: 477 ELAGQLISILFEDLFKRFSVLTKKQIDQTLIRYFQTRDASKAGTGRDDSNSTYPDCFRNL 536
Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499
TD IT G+++ALS+GNW I+RFRMER G+TQVL+R S+IA++G+MTR+ SQFEK RKVS
Sbjct: 537 PTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLTRFSYIASLGIMTRVDSQFEKARKVS 596
Query: 500 GPR 508
GPR
Sbjct: 597 GPR 599
[157][TOP]
>UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0D7M6_PARTE
Length = 1131
Score = 158 bits (399), Expect = 2e-37
Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Frame = +2
Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193
D+AR+ LA V L HV +Y F K Y+ MVRR++ A+ D +DD+DYYGNKR+ A
Sbjct: 289 DQAREKLAQVFLAHVNCKKYDFYPKAIYLGQMVRRLILAMEDKRFVDDKDYYGNKRMRCA 348
Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKAN-RATQFDVAKAIRT--DTITYGLESALSS 364
G LL LLFEDLFK LNS I L KAN + T DV ++ IT GL A+ +
Sbjct: 349 GNLLELLFEDLFKGLNSTISSILKKELGKANCKFTPKDVTMKMKEFGVDITKGLNRAIKT 408
Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
G W I+RF M+R+GVTQ+L+R+S+ +A+GM+T+M SQ +KT KVSGPR
Sbjct: 409 GKWTIQRFHMDRQGVTQLLARISYTSALGMLTKMRSQVQKTLKVSGPR 456
[158][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
bovis RepID=A7AM79_BABBO
Length = 1171
Score = 156 bits (394), Expect = 9e-37
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 11/177 (6%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
+++ D+L V+L H+P+ + F+ KI + +M RR+L +DD+D+YGNKRLE
Sbjct: 343 IEDTHDILTRVLLSHIPMRNCRDFSGKIKSLCLMARRVLSVASGKEPMDDKDHYGNKRLE 402
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSK----------ANRATQFDVAKAIRTDTIT 337
LAG L+S+LFEDLFK +K+Q DA L++ +A D ++ TD IT
Sbjct: 403 LAGQLISILFEDLFKAFLGQLKKQIDATLTRHYEIVSNCHGGEQAKYPDCLVSLPTDIIT 462
Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
G+++ +S+GNW I+RFR+ER GV+Q+LSRLS+I+ +GMMT+ SQFEK RKVS PR
Sbjct: 463 RGMQATISTGNWNIKRFRIERSGVSQILSRLSYISCLGMMTKTNSQFEKGRKVSKPR 519
[159][TOP]
>UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V6K7_NOSCE
Length = 1091
Score = 156 bits (394), Expect = 9e-37
Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184
+K++E R+V+ +L +V K + +MVRR+++ + +D+D+ GNKR
Sbjct: 284 NKLEEVRNVIVEKILPNVKFDGVDLRNKGIMICLMVRRLIFTQKNIITEEDKDFIGNKRF 343
Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358
ELAG LLS+LFED FK+ N ++KR D +L+K RA +FD ++T+ IT ++ A+
Sbjct: 344 ELAGQLLSILFEDSFKKFNWELKRSIDKILTKRLRAQEFDALTFFNLQTNIITTSMQRAI 403
Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
SSGNW +RRFRM+R GVT VL R S+I+A+GMMT++ S FEKTRKVSGPR
Sbjct: 404 SSGNWNLRRFRMDRSGVTHVLIRHSYISAVGMMTKVNSHFEKTRKVSGPR 453
[160][TOP]
>UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2E3T5_TRIVA
Length = 1142
Score = 155 bits (392), Expect = 1e-36
Identities = 75/164 (45%), Positives = 114/164 (69%)
Frame = +2
Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196
+ R+ L +VL H+P F +K +V M R +L + +DP ID RD++GNKRLELAG
Sbjct: 311 KGREFLRSMVLPHIPSTLTDFRRKSVFVGFMTRWLLLSAIDPRMIDGRDFFGNKRLELAG 370
Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376
LL LLFEDLFK N+ +++ ++K+ ++A+A+ ++TIT+GL+ A+SSGNW
Sbjct: 371 ELLELLFEDLFKTFNASMQKTVSRTINKSKGIDPSNIAQAMHSETITHGLKYAISSGNWN 430
Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
I RF+M R GV+Q+L R+S++ + M+TR++S FEKT+KV+G R
Sbjct: 431 ITRFKMMRAGVSQLLGRMSYLQFVSMVTRISSHFEKTQKVAGAR 474
[161][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5K7V0_9ALVE
Length = 1159
Score = 155 bits (391), Expect = 2e-36
Identities = 84/159 (52%), Positives = 112/159 (70%), Gaps = 15/159 (9%)
Frame = +2
Query: 77 FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256
F+ K ++ +M+RR L A D +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+
Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386
Query: 257 QADAVLSK---------ANRATQF------DVAKAIRTDTITYGLESALSSGNWIIRRFR 391
D L+K A R+T DV + I ++ IT G+ A+SSGNW I+RFR
Sbjct: 387 SVDMRLTKFFQQTSSARAGRSTVGLDSGYPDVLRDIDSERITRGMNRAISSGNWNIKRFR 446
Query: 392 MERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
++R GV+QVLSR SFIAA+G MTR+ SQFEK+RK++GPR
Sbjct: 447 IDRSGVSQVLSRFSFIAALGAMTRVKSQFEKSRKLAGPR 485
[162][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4MYU5_THEPA
Length = 1244
Score = 154 bits (390), Expect = 2e-36
Identities = 78/177 (44%), Positives = 125/177 (70%), Gaps = 11/177 (6%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
+++ D+L+ V+L H+P+ + F+ KI +++M R+L V + +DD+D+YGNKRLE
Sbjct: 380 LEDTHDILSRVLLSHIPMKDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 439
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337
LAG ++S+LFED +K+ S++K+ +++L +K + D+ + TD IT
Sbjct: 440 LAGQMISILFEDFYKKFLSNMKKSIESILVKYLEANPNPAKGENSNFPDIFGLMPTDIIT 499
Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFEK RKVSGPR
Sbjct: 500 NGMQNAIATGNWNIKRFRMEKSGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 556
[163][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AC47_9CRYT
Length = 1219
Score = 154 bits (389), Expect = 3e-36
Identities = 85/182 (46%), Positives = 118/182 (64%), Gaps = 16/182 (8%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190
+++ + L VVL HV K + +M RR++ A + + +DD+DYYGNKR+EL
Sbjct: 360 IEDVLETLNRVVLSHVGTIYGDLRPKALILCLMARRVIDASENQSLLDDKDYYGNKRIEL 419
Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSK-------ANRATQF---------DVAKAIR 322
AG L+S+LFEDLFKR S K+Q D L + +++ T D + +
Sbjct: 420 AGQLISILFEDLFKRFASLTKKQIDQTLVRYFQTKDNSSKVTSGKEDTNSNYPDCFRNLP 479
Query: 323 TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSG 502
TD IT G+++ALS+GNW I+RFRMER G+TQVLSR S+I+A+G+MTR+ SQFEK RKVSG
Sbjct: 480 TDIITRGMQTALSTGNWSIKRFRMERSGMTQVLSRYSYISALGIMTRVDSQFEKARKVSG 539
Query: 503 PR 508
PR
Sbjct: 540 PR 541
[164][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UB41_THEAN
Length = 1244
Score = 152 bits (385), Expect = 9e-36
Identities = 76/177 (42%), Positives = 125/177 (70%), Gaps = 11/177 (6%)
Frame = +2
Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
+++ D+L+ V+L H+P+ + F+ KI +++M R+L V + +DD+D+YGNKRLE
Sbjct: 379 IEDTHDILSRVLLSHIPMRDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 438
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337
LAG ++S+LFED +K+ +++K+ ++++ +K + D+ + TD IT
Sbjct: 439 LAGQMISILFEDFYKKFLNNMKKSIESIIVKYLESNPNPTKGENSNFPDIFGLMPTDIIT 498
Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFEK RKVSGPR
Sbjct: 499 NGMQNAIATGNWNIKRFRMEKTGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 555
[165][TOP]
>UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=B7XI25_ENTBH
Length = 1107
Score = 147 bits (372), Expect = 3e-34
Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 6/175 (3%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQF----AQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169
K K D+ +++ +L P + K + +M+R+++ A + DD+DY
Sbjct: 278 KLKSDDNKEIKVKSILAEKLFPNIKIDDDLKNKGICLCLMIRKLILAKQNLLKPDDKDYL 337
Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYG 343
GNKR ELAG LLS+LFED FK+ N ++K+ D +LSK R +FD ++T +IT
Sbjct: 338 GNKRFELAGQLLSILFEDTFKKFNFELKKSIDKILSKRIRTNEFDALTFFNLQTGSITTT 397
Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
L A+SSGNW ++RF+MER GVT VL+R S+I A+GMMT++ S FEKTRKVSGPR
Sbjct: 398 LSRAISSGNWNLKRFKMERSGVTHVLTRYSYITALGMMTKINSHFEKTRKVSGPR 452
[166][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KAB2_9ALVE
Length = 1140
Score = 138 bits (347), Expect = 2e-31
Identities = 77/150 (51%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Frame = +2
Query: 77 FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256
F+ K ++ +M+RR L A D +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+
Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386
Query: 257 QADAVLSKANRATQFDVAKAIRTDTITYGLESAL------SSGNWIIRRFRMERKGVTQV 418
D L+K F + R T GL+S ++GN I+RFR++R GV+QV
Sbjct: 387 SVDMRLTKF-----FQQTSSARAGRSTVGLDSGYPDVLLRATGN--IKRFRIDRSGVSQV 439
Query: 419 LSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
LSR SFIAA+G MTR+ SQFEK+RK++GPR
Sbjct: 440 LSRFSFIAALGAMTRVKSQFEKSRKLAGPR 469
[167][TOP]
>UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP
Length = 1100
Score = 124 bits (312), Expect = 3e-27
Identities = 59/142 (41%), Positives = 97/142 (68%)
Frame = +2
Query: 83 QKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQA 262
+K ++++MV+++ + P D++DYYGNKRL LAG L+S+LFED F++ + +
Sbjct: 320 EKGIFLSLMVKKIFSNLNQPMITDNKDYYGNKRLGLAGNLVSILFEDFFRKTLKEGYKYY 379
Query: 263 DAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIA 442
+K + ++ +R D IT GLE + S+GNWI+++ ++E+ GVTQ LSRLSFI+
Sbjct: 380 KLNSTKLKKNQHLELISFLRQDIITNGLEYSFSTGNWIVKKLKIEKNGVTQTLSRLSFIS 439
Query: 443 AMGMMTRMTSQFEKTRKVSGPR 508
++ ++T++TSQ EK RK+ GPR
Sbjct: 440 SISIVTKITSQNEKIRKIRGPR 461
[168][TOP]
>UniRef100_Q98S96 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
RepID=Q98S96_GUITH
Length = 1049
Score = 121 bits (304), Expect = 2e-26
Identities = 61/160 (38%), Positives = 103/160 (64%)
Frame = +2
Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208
+L+H+++ PV Q +K ++ +M+R++LYA+ P +D +DYYGNKRLEL+G L+
Sbjct: 286 ILSHIIVNKNPVS--QNLEKGIFMTMMIRKLLYALQIPDLLDSKDYYGNKRLELSGDLVE 343
Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388
+L EDL + + K+ + + N I++D I+YG+E+A +GNW I ++
Sbjct: 344 ILLEDLLHKSWIESKKFIEKKKIEVNETIYHHF---IKSDFISYGIENAFITGNWKINKY 400
Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+++ G+TQ+LSRLSF+++ M+ + +S FEKTRK PR
Sbjct: 401 GIDKNGITQILSRLSFMSSFSMLLKTSSNFEKTRKSISPR 440
[169][TOP]
>UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
RepID=C6LZ34_GIALA
Length = 1239
Score = 121 bits (304), Expect = 2e-26
Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 4/155 (2%)
Frame = +2
Query: 56 VPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKR 235
V + R+ + K Y+A MVRR + D +D+ GNK++E AG LL L+F+D FK
Sbjct: 408 VNMARFNWLPKAVYLATMVRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKT 467
Query: 236 LNSDIKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK 403
L + + R+ D +L S NR T +DV + IT SA+S+GNW I R ++R
Sbjct: 468 LLAHMARKVDVILRSDKNRGTDLTNYDVVSLVDPSIITRAFNSAISTGNWKIERIGVDRV 527
Query: 404 GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
GV+QVLSRLS+I+ +G +TR++S F+K K SGPR
Sbjct: 528 GVSQVLSRLSYISTLGQVTRLSSTFDKAMKSSGPR 562
[170][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
RepID=A8B2N4_GIALA
Length = 1238
Score = 120 bits (301), Expect = 5e-26
Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
Frame = +2
Query: 68 RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSD 247
R+ + K Y+A M+RR + D +D+ GNK++E AG LL L+F+D FK L +
Sbjct: 411 RFNWLPKAVYLATMIRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKTLLAH 470
Query: 248 IKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQ 415
+ R+ D+VL S NR T +D+ + IT SA+S+GNW I + ++R GV+Q
Sbjct: 471 MVRKVDSVLRSDRNRGTDLTNYDIVSLVDPSIITRAFNSAISTGNWKIEKIGVDRVGVSQ 530
Query: 416 VLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+LSRLS+I+A+G +TR++S F+K K SGPR
Sbjct: 531 ILSRLSYISALGQVTRLSSTFDKAMKSSGPR 561
[171][TOP]
>UniRef100_A6RTM3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RTM3_BOTFB
Length = 490
Score = 115 bits (289), Expect = 1e-24
Identities = 55/101 (54%), Positives = 73/101 (72%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+S V++A + LA++++ HVPV F K Y+ MVRR+L A+++P +DDRDY GNKR
Sbjct: 374 RSYVNDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPTLVDDRDYVGNKR 433
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD 304
LELAG LLSLLFEDLFK+ N+D+K D VL K NR +FD
Sbjct: 434 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFD 474
[172][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
RepID=Q27670_9ANNE
Length = 859
Score = 111 bits (278), Expect = 2e-23
Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A+++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 140 EKRIKYAKEILQKEMLPHVGISDFCETRKAYFLGYMVHRLLLAALGRREVDDRDHYGNKR 199
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L+ +I+ A + +R F++ AI+T TIT GL+ +L+
Sbjct: 200 LDLAGPLLAYLFRGLFRNLSKEIRLYAQKFI---DRGKDFNLELAIKTRTITDGLKYSLA 256
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306
[173][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001926137
Length = 1426
Score = 110 bits (276), Expect = 4e-23
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 338 EKRIKYAREILQKEMLPHVGTSDFCETKKAYFLGYMVHRILLAALGRRELDDRDHYGNKR 397
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LFK L +++ A + K F + AI+T TIT GL +L+
Sbjct: 398 LDLAGPLLAFLFRGLFKNLMKEVRLYAQKFIDKGK---DFKIELAIKTKTITDGLRYSLA 454
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 455 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 504
[174][TOP]
>UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
RepID=Q27446_ARTSA
Length = 862
Score = 110 bits (275), Expect = 5e-23
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ AR++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 142 RIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 201
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG L+SLLF LFK L +++ A + +R F++ AI+ IT GL+ +L++G
Sbjct: 202 LAGPLMSLLFRGLFKTLTKEVRMYAQKFI---DRGKDFNIELAIKPKFITDGLKYSLATG 258
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 259 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 306
[175][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5712C
Length = 1175
Score = 110 bits (274), Expect = 7e-23
Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L+
Sbjct: 393 LDLAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[176][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 110 bits (274), Expect = 7e-23
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A+++L L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 459 EKRIKYAKEILQKETLPHVGVSDFCETRKAYFLGYMVHRLLLAALKRRDVDDRDHYGNKR 518
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +I+ A + K F++ AIR+ IT GL+ +L+
Sbjct: 519 LDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGK---DFNLELAIRSQIITDGLKYSLA 575
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 576 TGNWGDQKKANQARPGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 625
[177][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 109 bits (273), Expect = 9e-23
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[178][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865901
Length = 1176
Score = 109 bits (273), Expect = 9e-23
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ AR++L +L HV + Y +K ++ +V R+L A L +DDRD+YGNKRL+
Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL+ +L++G
Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501
[179][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
RepID=Q6DRH1_DANRE
Length = 562
Score = 109 bits (273), Expect = 9e-23
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[180][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 109 bits (273), Expect = 9e-23
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[181][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3Y5U9_BRAFL
Length = 1104
Score = 109 bits (273), Expect = 9e-23
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ AR++L +L HV + Y +K ++ +V R+L A L +DDRD+YGNKRL+
Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL+ +L++G
Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501
[182][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017937B7
Length = 1101
Score = 108 bits (271), Expect = 2e-22
Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[183][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QAK7_ANOGA
Length = 1175
Score = 108 bits (271), Expect = 2e-22
Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[184][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
RepID=Q27548_CRAGI
Length = 859
Score = 108 bits (271), Expect = 2e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV V + +K ++ MV R+L A + +DDRD+YGNKR
Sbjct: 140 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAAIGRREVDDRDHYGNKR 199
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +++ A + +R F++ AI+T IT GL+ +L+
Sbjct: 200 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 256
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306
[185][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B44D8
Length = 1175
Score = 108 bits (270), Expect = 2e-22
Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ AR++L L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAREILQKETLPHVGVSDFCETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLARPR 499
[186][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 108 bits (270), Expect = 2e-22
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472
[187][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016DFC9D
Length = 1045
Score = 108 bits (270), Expect = 2e-22
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 144 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 203
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 204 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 260
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 261 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 308
[188][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4T1Y4_TETNG
Length = 1217
Score = 108 bits (270), Expect = 2e-22
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G
Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472
[189][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WKE9_CULQU
Length = 1176
Score = 108 bits (270), Expect = 2e-22
Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLLKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[190][TOP]
>UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
confervae-glomeratae RepID=A1YID9_9FUNG
Length = 886
Score = 108 bits (270), Expect = 2e-22
Identities = 56/168 (33%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A D+L +L HV + + +K + M+ R+L A L+ +DDRD++G KRL+
Sbjct: 144 RIRYATDILTKEMLPHVSMESHHQTRKAFFFGYMIHRLLLAALERRPLDDRDHFGRKRLD 203
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LLS LF LF++L +D+ R ++ +F++A A+++ TIT GL+ +L++G
Sbjct: 204 LAGPLLSSLFRTLFRKLTTDVSRYTKKIVETGG---EFNLAMALKSATITKGLQYSLATG 260
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++F + GV+QVL+R ++ + + + R+ + + K++ PR
Sbjct: 261 NWGDQKKFMSAKAGVSQVLNRYTYASTLSHLRRLNTPIGRDGKLAKPR 308
[191][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D6F3
Length = 1175
Score = 108 bits (269), Expect = 3e-22
Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMFAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[192][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 107 bits (268), Expect = 4e-22
Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ +R++L +L HV V + +K Y+ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYSREILQKEMLPHVGVSDFCETKKAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG L++ LF LF+ L +++ A + +R F++ AI+T IT GL +L++G
Sbjct: 395 LAGPLMAFLFRGLFRNLTKEVRMYAQKFI---DRGKDFNLELAIKTRIITDGLRYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL++ + + + R+ S + K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRVNSPIGRDGKLAKPR 499
[193][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 107 bits (268), Expect = 4e-22
Identities = 58/169 (34%), Positives = 97/169 (57%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR+VL +L HV V + +K Y + R+L A L+ +DDRD++ NKR
Sbjct: 331 EQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYITHRLLLASLERRPLDDRDHFANKR 390
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL LF LFK+L D++ + K +F + A+++ TIT GL+ +L+
Sbjct: 391 LDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDK---EFIASSAVKSKTITSGLKYSLA 447
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW + + GV QVL+RL+F + + + R+ + + K++ PR
Sbjct: 448 TGNWGSSKSGGTKSGVAQVLNRLTFASTLSHLRRLNTPIGREGKLAKPR 496
[194][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 107 bits (267), Expect = 5e-22
Identities = 60/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLSAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +++ A + +R F++ AI+T IT GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL++ + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRLNSPIGRDGKLAKPR 499
[195][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[196][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PTC0_DROYA
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[197][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N9I3_DROWI
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[198][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4M040_DROVI
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[199][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KDW5_DROMO
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[200][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4K015_DROGR
Length = 1175
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 394
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 451
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499
[201][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
RepID=Q298X6_DROPS
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[202][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3P0M0_DROER
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[203][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3LYR3_DROAN
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[204][TOP]
>UniRef100_A1YIC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Smittium culisetae
RepID=A1YIC7_SMICU
Length = 899
Score = 107 bits (267), Expect = 5e-22
Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L L HV + +K ++ MV R+L VL+ DDRD+YG KR
Sbjct: 125 EKRIKYAREILQKEFLPHVGTQPHNETRKTYFLGYMVHRLLQCVLERRDQDDRDHYGRKR 184
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL++LF +LFK++ D+ R + +F+++ A++++TIT GL+ +L+
Sbjct: 185 LDLAGPLLAMLFRNLFKKMTRDMTRYLQKCIESRR---EFNLSMALKSNTITAGLKYSLA 241
Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ M+ R GV QVL+R +F + + + R + + K++ PR
Sbjct: 242 TGNWGDQKKAMQSRTGVAQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 291
[205][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 107 bits (267), Expect = 5e-22
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G
Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500
[206][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[207][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLQLAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[208][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
Length = 951
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[209][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[210][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
n=1 Tax=Pan troglodytes RepID=UPI0000E20419
Length = 1099
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424
[211][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[212][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
Length = 1099
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424
[213][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[214][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[215][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[216][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[217][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500
[218][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[219][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 328 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 387
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 388 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 444
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 445 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 494
[220][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 329 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 388
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 389 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 445
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 446 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 495
[221][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[222][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[223][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
Length = 932
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[224][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A01AA
Length = 927
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[225][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[226][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3357E
Length = 1177
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500
[227][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[228][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
Length = 949
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[229][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
RepID=Q5ZMN9_CHICK
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[230][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[231][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
Length = 1083
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 242 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 301
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 302 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 358
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 359 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 408
[232][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 326 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 385
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 386 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 442
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 443 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 492
[233][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
Length = 1099
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424
[234][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 332 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 391
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 392 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 448
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 449 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 498
[235][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 106 bits (265), Expect = 8e-22
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR
Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+
Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499
[236][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 106 bits (264), Expect = 1e-21
Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+
Sbjct: 339 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 398
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LF+ L +++ A + +R F++ A++ IT GL +L++G
Sbjct: 399 LAGPLLAFLFRGLFRNLMKEVRMYAQKFI---DRGKDFNIELALKPKVITDGLRYSLATG 455
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 456 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPR 503
[237][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 105 bits (262), Expect = 2e-21
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR
Sbjct: 339 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 398
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+
Sbjct: 399 LDLAGPLLAFLFRSLFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLTYSLA 455
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL++ A + + R S + K++ PR
Sbjct: 456 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 505
[238][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=A1YID1_9FUNG
Length = 883
Score = 105 bits (261), Expect = 2e-21
Identities = 58/168 (34%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A ++L L HV + +K + MV R+L A L+ +DDRD+YG KR++
Sbjct: 140 RIKYATEILQKEFLPHVATEAHTETKKAYFFGYMVHRLLLAALERRDLDDRDHYGKKRMD 199
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL++LF LF++L D+ R + +NR +F++ A++++TIT GL+ +L++G
Sbjct: 200 LAGPLLAMLFRMLFRKLTKDVGRYLQKCID-SNR--EFNLTLAVKSNTITNGLKYSLATG 256
Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ M+ R GV+QVL+R +F + + + R + + K++ PR
Sbjct: 257 NWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 304
[239][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 104 bits (260), Expect = 3e-21
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR
Sbjct: 340 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 399
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+
Sbjct: 400 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 456
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL++ A + + R S + K++ PR
Sbjct: 457 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 506
[240][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 104 bits (260), Expect = 3e-21
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR
Sbjct: 361 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 420
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+
Sbjct: 421 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 477
Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW ++ R GV+QVL+RL++ A + + R S + K++ PR
Sbjct: 478 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 527
[241][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1ML14_9CHLO
Length = 1172
Score = 103 bits (258), Expect = 5e-21
Identities = 56/169 (33%), Positives = 97/169 (57%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A+D+L +L HV V +K Y+ +V R+L L DDRD++GNKR
Sbjct: 330 EKRIKYAQDILQKELLPHVGVDEECETRKAYYLGYIVHRLLLCALGRRNEDDRDHFGNKR 389
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
++LAG L+++LF LF++L D++ + + + A++ TIT GL+ +L+
Sbjct: 390 MDLAGPLIAILFRQLFRKLTKDVRLYCQRCVDSGK---EIQLTLAVKAKTITSGLKYSLA 446
Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW + + R GV+QVL+RLSF + + + R+ S + K++ PR
Sbjct: 447 TGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSPIGREGKLAKPR 495
[242][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 103 bits (258), Expect = 5e-21
Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
+V ARD+L +L H+ V K ++ MV R L A L +DDRD+YGNKRL+
Sbjct: 325 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 384
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG L++ LF LFK+L + R+ V NR +F V + + + GL +L++G
Sbjct: 385 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 441
Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ E R GV+QVL+RL+F + + + R+ S ++T K++ PR
Sbjct: 442 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 489
[243][TOP]
>UniRef100_A1YIE5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A1YIE5_MONBE
Length = 904
Score = 103 bits (258), Expect = 5e-21
Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
+V ARD+L +L H+ V K ++ MV R L A L +DDRD+YGNKRL+
Sbjct: 148 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 207
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG L++ LF LFK+L + R+ V NR +F V + + + GL +L++G
Sbjct: 208 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 264
Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ E R GV+QVL+RL+F + + + R+ S ++T K++ PR
Sbjct: 265 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 312
[244][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIE4_NEOFR
Length = 915
Score = 103 bits (257), Expect = 7e-21
Identities = 57/164 (34%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
Frame = +2
Query: 20 ARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGG 199
A ++L +L H+ + +K + M+ R+L A L+ DDRD++G KRL+LAG
Sbjct: 151 AAEILQKELLPHIGTKAHTETKKAYFFGYMIHRLLLAALERRECDDRDHFGKKRLDLAGP 210
Query: 200 LLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWII 379
LL LF LF++L SD+ + + +R +F++ AIR +TIT GL+ +L++GNW
Sbjct: 211 LLGSLFRMLFRKLTSDVSKSLQKCI---DRNREFNLNVAIRPNTITDGLKYSLATGNWGA 267
Query: 380 R-RFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+ +F R GV+QVL+R +F + + + R+ + + K++ PR
Sbjct: 268 QSKFMQSRAGVSQVLNRYTFASTLSHLRRLNTPIGRDGKLAKPR 311
[245][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YID6_ALLMA
Length = 896
Score = 103 bits (257), Expect = 7e-21
Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A D+L +L H+ + +K ++ MV R+L A L +DDRD++G KRL+
Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF F++L D+ R + R +F++ AI ++TIT GL AL++G
Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++F R GV+QVL+R +F + + + R+ + + K++ PR
Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300
[246][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YID5_ALLMA
Length = 867
Score = 103 bits (257), Expect = 7e-21
Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A D+L +L H+ + +K ++ MV R+L A L +DDRD++G KRL+
Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF F++L D+ R + R +F++ AI ++TIT GL AL++G
Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252
Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++F R GV+QVL+R +F + + + R+ + + K++ PR
Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300
[247][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
RepID=Q6RYG8_9BASI
Length = 931
Score = 103 bits (256), Expect = 9e-21
Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Frame = +2
Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187
++ A ++L +L H+ + Q +K + MV R+L A LD +DDRD++G KRL+
Sbjct: 145 RLQYAEEILQKEMLPHISMSEGQQGKKAYFFGYMVHRLLLAALDRRDLDDRDHFGKKRLD 204
Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367
LAG LL+ LF LF++L D+ R + F++ A++++TIT GL+ +L++G
Sbjct: 205 LAGPLLASLFRILFRKLTKDVYRHLQKCVEMQK---PFNLNAAVKSNTITNGLKYSLATG 261
Query: 368 NWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
NW ++ M+ K GV+QVL+R +F + + + R + + K++ PR
Sbjct: 262 NWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 309
[248][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB2_ENCCU
Length = 1141
Score = 103 bits (256), Expect = 9e-21
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ A+D+LA VL H+ + +K ++ +V+R+L L DDRD+YG KR
Sbjct: 305 EKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKR 364
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
++L+G LL+ LF LFK+L D R + +F++A ++ IT G AL+
Sbjct: 365 MDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGR---EFNIALGLKASIITQGFRYALA 421
Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW + M+ R GV QVL+R +F++ + + R+ + EK K++ PR
Sbjct: 422 TGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPR 471
[249][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
RepID=Q27826_EUPOC
Length = 1194
Score = 102 bits (255), Expect = 1e-20
Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181
+ ++ AR++L L HV +QK ++ M R+L A L DDRD+YG KR
Sbjct: 359 EERIRHAREILKRHFLPHVSTKDSCESQKSYFIGYMCHRLLNAHLGRIKEDDRDHYGKKR 418
Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361
L++AG LL +LF +LF+R +K + ++A++ ++ KA + D I+ GL+ AL+
Sbjct: 419 LDMAGSLLGMLFRNLFRRF---VKEAGRYLKAQADKGDSLNITKAFKKDIISDGLKYALA 475
Query: 362 SGNWIIRRF-RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
+GNW + + GV+QVL+RL+F + + + R+ + +K+ K++ PR
Sbjct: 476 TGNWGTNAAGEVSKTGVSQVLNRLTFASTLSHLRRLNTPLQKSGKLTKPR 525
[250][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 102 bits (253), Expect = 2e-20
Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAV-MVRRMLYAVLDPACIDDRDYYGNK 178
+ ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNK
Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYYMVHRLLLAALGRRELDDRDHYGNK 393
Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358
RL+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L
Sbjct: 394 RLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSL 450
Query: 359 SSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508
++GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR
Sbjct: 451 ATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501