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[1][TOP] >UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IY03_CHLRE Length = 1161 Score = 330 bits (847), Expect = 3e-89 Identities = 169/169 (100%), Positives = 169/169 (100%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR Sbjct: 315 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 374 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS Sbjct: 375 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 434 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR Sbjct: 435 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 483 [2][TOP] >UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1FIF0_9CHLO Length = 1159 Score = 266 bits (681), Expect = 5e-70 Identities = 129/169 (76%), Positives = 152/169 (89%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +SKVDEARD+LA VVL HVPVP Y F QK YVA+M+RR+L+A++DP +DD+DYYGNKR Sbjct: 325 RSKVDEARDILAGVVLAHVPVPAYDFRQKCVYVAIMIRRILHAMVDPTQVDDKDYYGNKR 384 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S Sbjct: 385 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 444 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 445 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493 [3][TOP] >UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RS40_OSTLU Length = 1146 Score = 263 bits (672), Expect = 5e-69 Identities = 129/169 (76%), Positives = 151/169 (89%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +S+VDEARD+LA VVL HVPV Y F QK AY+++MVRR+L A+LDP IDD+DYYGNKR Sbjct: 311 RSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQIDDKDYYGNKR 370 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S Sbjct: 371 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 430 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 431 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 479 [4][TOP] >UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01FH9_OSTTA Length = 2569 Score = 262 bits (669), Expect = 1e-68 Identities = 127/169 (75%), Positives = 151/169 (89%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +S++DEARD+LA VVL HVPV Y F QK AY+++MVRR+L A+LDP +DD+DYYGNKR Sbjct: 341 RSRIDEARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRILNALLDPTQVDDKDYYGNKR 400 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L++LLFED FKRLN+D+KRQADAVLSKANRATQFD+ K IR DT++ GLE A+S Sbjct: 401 LELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDTLSNGLEHAIS 460 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 461 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 509 [5][TOP] >UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4K3_9CHLO Length = 1197 Score = 257 bits (657), Expect = 3e-67 Identities = 127/169 (75%), Positives = 150/169 (88%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +++VDEARD+LA VVL HVPV Y F K AYVAVM+RR+L+A++D IDD+DYYGNKR Sbjct: 363 RNRVDEARDILAGVVLAHVPVVAYDFRGKCAYVAVMIRRILHAMIDRTQIDDKDYYGNKR 422 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LL+LLFED FKRLN+D+KRQADAVLSK+NRATQFD+ K IR DT++ GLE A+S Sbjct: 423 LELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCIRQDTLSNGLEHAIS 482 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 483 SGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPR 531 [6][TOP] >UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA Length = 1135 Score = 235 bits (599), Expect = 1e-60 Identities = 115/169 (68%), Positives = 143/169 (84%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K +VDEARD+LA VVL HVPV ++ F K Y+AV++R+ML A+L+ +DD DY GNKR Sbjct: 288 KVRVDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKR 347 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFKR+N+++K+ DA LSKANR+TQFD+ K IR DT+T GLE A+S Sbjct: 348 LELAGQLLSLLFEDLFKRMNAELKKSMDATLSKANRSTQFDIIKLIRPDTLTNGLEHAIS 407 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RF+M+RKGVTQV+SRLSFIAA+G MTR++SQFEKTRKVSGPR Sbjct: 408 SGNWAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPR 456 [7][TOP] >UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQM2_THAPS Length = 1108 Score = 225 bits (574), Expect = 1e-57 Identities = 111/168 (66%), Positives = 134/168 (79%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S DEARDV A+VVL HVPV + F K Y+ +VRR++ L + +DD+DYYGNKRL Sbjct: 269 SPEDEARDVFANVVLSHVPVVNFDFHAKTIYIGHIVRRLVMVQLGKSSLDDKDYYGNKRL 328 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364 ELAG LLSLLFEDLFK N+D+K+Q D VLSK NRA FDV K IR D+I YG+ SA+SS Sbjct: 329 ELAGSLLSLLFEDLFKHFNTDLKKQTDMVLSKPNRAQAFDVIKTIRPDSIAYGMMSAISS 388 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW+++RFRM+R GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 389 GNWVLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 436 [8][TOP] >UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FVD4_PHATR Length = 1211 Score = 221 bits (563), Expect = 2e-56 Identities = 110/168 (65%), Positives = 134/168 (79%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S DEAR+VLA+VVL HVPV + F +K Y+ +VRR+L L +DD+DYYGNKRL Sbjct: 351 SPEDEAREVLANVVLSHVPVTHFDFREKALYIGHIVRRVLLVHLGKMPLDDKDYYGNKRL 410 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364 ELAG LLSLLFEDLFK N D+KRQAD VLSK NR FDV K IR DTIT G+ +A+++ Sbjct: 411 ELAGNLLSLLFEDLFKIFNKDLKRQADLVLSKPNRTQAFDVVKTIRPDTITNGMINAIAT 470 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW+++RFRM+R GVTQVLSRLS+++A+GMMTR+ SQFEKTRKVSGPR Sbjct: 471 GNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPR 518 [9][TOP] >UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI Length = 1608 Score = 218 bits (556), Expect = 1e-55 Identities = 104/169 (61%), Positives = 135/169 (79%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K +EARD+LA VVL HVPV RY F K+ Y+++M+RR++ A D +C+DD+DYYGNKR Sbjct: 317 KTKSEEARDILAGVVLNHVPVRRYNFRLKVIYLSLMIRRIIMASKDKSCLDDKDYYGNKR 376 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 +EL+G L+SLLFED FK+ S++K+ D ++KANRA D+ K IRTDTIT G A+S Sbjct: 377 IELSGQLISLLFEDCFKKFQSELKKSVDQAIAKANRAENLDLPKLIRTDTITNGFTHAIS 436 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SG W ++RFRMER GV+QVLSRLS+I+ MGMMTR+ SQFEKTRKV+GPR Sbjct: 437 SGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFEKTRKVAGPR 485 [10][TOP] >UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q0E7_IXOSC Length = 1141 Score = 216 bits (550), Expect = 7e-55 Identities = 109/169 (64%), Positives = 134/169 (79%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ VD+ARD+LA VL HVPV Y F K Y+A+M+RR++ A + IDDRDYYGNKR Sbjct: 311 KTPVDDARDILATTVLAHVPVEHYNFRVKAMYLALMIRRVIEAQTNREMIDDRDYYGNKR 370 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFKR N+++K AD + K RATQFDV K +R D IT GL S++S Sbjct: 371 LELAGSLLSLLFEDLFKRFNTELKLVADKTIPKV-RATQFDVVKYVRQDLITNGLVSSIS 429 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+MER GVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 430 TGNWTVKRFKMERIGVTQVLTRLSYISALGMMTRVNSQFEKTRKVSGPR 478 [11][TOP] >UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7Q416_ANOGA Length = 1089 Score = 216 bits (549), Expect = 9e-55 Identities = 109/169 (64%), Positives = 134/169 (79%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ DEARD+LA +L HVPVP + F K YVA+M+RR++ A LD + +DDRDYYGNKR Sbjct: 297 KTTADEARDLLATTILAHVPVPSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 356 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSL+FEDLFKR N ++K AD + K +A QFDV K +R IT GLE+A+S Sbjct: 357 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDVGKHMREALITAGLETAIS 415 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 416 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464 [12][TOP] >UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A103B Length = 1122 Score = 214 bits (546), Expect = 2e-54 Identities = 110/169 (65%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472 [13][TOP] >UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DA04E Length = 1136 Score = 214 bits (546), Expect = 2e-54 Identities = 110/169 (65%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR Sbjct: 306 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 364 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 365 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 423 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 424 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 472 [14][TOP] >UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis RepID=B2GUR3_XENTR Length = 1134 Score = 214 bits (546), Expect = 2e-54 Identities = 110/169 (65%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KSK+DEAR++LA +L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR Sbjct: 304 KSKIDEARELLASTILTHVPVKEFHFRTKCIYIAVMVRRVILAQ-GANKVDDRDYYGNKR 362 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 363 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 421 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 422 SGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 470 [15][TOP] >UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S7G7_TETNG Length = 1171 Score = 212 bits (539), Expect = 1e-53 Identities = 107/169 (63%), Positives = 139/169 (82%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR Sbjct: 331 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 389 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 390 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 448 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 449 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 497 [16][TOP] >UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE Length = 1130 Score = 211 bits (538), Expect = 2e-53 Identities = 107/169 (63%), Positives = 138/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR Sbjct: 300 KTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 358 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 359 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 417 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 418 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 466 [17][TOP] >UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q28ZV6_DROPS Length = 1137 Score = 211 bits (537), Expect = 2e-53 Identities = 107/169 (63%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EARD+L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPAEEARDLLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [18][TOP] >UniRef100_B0WCT6 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0WCT6_CULQU Length = 928 Score = 211 bits (537), Expect = 2e-53 Identities = 106/169 (62%), Positives = 133/169 (78%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ DEARD+LA +L HVPV + F K YVA+M+RR++ A LD + +DDRDYYGNKR Sbjct: 302 KTTADEARDLLATTILAHVPVNNFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSL+FEDLFKR N ++K AD + K +A QFD+ K +R I+ GLE+A+S Sbjct: 362 LELAGSLLSLMFEDLFKRFNWELKMIADKNIPKI-KAAQFDIVKHMRAALISTGLETAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 421 TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 469 [19][TOP] >UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus RepID=UPI0001560749 Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [20][TOP] >UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379 Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [21][TOP] >UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus norvegicus RepID=UPI0000503D79 Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [22][TOP] >UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [23][TOP] >UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus RepID=UPI0000F339C2 Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [24][TOP] >UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [25][TOP] >UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN Length = 1075 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 245 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 303 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 304 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 362 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 363 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 411 [26][TOP] >UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN Length = 838 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 8 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 66 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 67 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 125 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 126 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 174 [27][TOP] >UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus RepID=RPC2_MOUSE Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [28][TOP] >UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens RepID=RPC2_HUMAN Length = 1133 Score = 211 bits (536), Expect = 3e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [29][TOP] >UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E487B4 Length = 830 Score = 210 bits (535), Expect = 4e-53 Identities = 104/169 (61%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KSKVDEAR++LA +L H+PV ++ F K Y+A+MVRR++ A D +DDRDYYGNKR Sbjct: 319 KSKVDEARELLATTILAHIPVVQFNFRAKSIYLALMVRRVIEAQGDAVKVDDRDYYGNKR 378 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L++LLFEDLFK+ NS++K+ AD + + RA QFD+ K +R D IT GL +A+S Sbjct: 379 LELAGQLIALLFEDLFKKFNSELKKYADQNIPRP-RAAQFDIVKYMRQDQITNGLITAIS 437 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+MER GVTQVLSRLS+I+ +GMMTR++SQFEKTRKVSGPR Sbjct: 438 TGNWSVKRFKMERAGVTQVLSRLSYISCLGMMTRISSQFEKTRKVSGPR 486 [30][TOP] >UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A Length = 1113 Score = 210 bits (534), Expect = 5e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 283 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 341 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 342 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 400 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 401 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 449 [31][TOP] >UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23 Length = 1133 Score = 210 bits (534), Expect = 5e-53 Identities = 107/169 (63%), Positives = 137/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKMEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 362 LELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 421 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [32][TOP] >UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56081 Length = 1122 Score = 209 bits (533), Expect = 7e-53 Identities = 109/169 (64%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ VDEARDVLA VL HVPV Y F K Y+ VMV+R++ A D +DD+DYYGNKR Sbjct: 294 KTPVDEARDVLATTVLAHVPVENYNFRMKAIYLGVMVKRVIEAQSDKKFMDDKDYYGNKR 353 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSL+FED+FKR N ++K A+ + K RATQFDV K +R+D IT L A+S Sbjct: 354 LELAGSLLSLMFEDVFKRFNWELKSIAEKTIPKI-RATQFDVVKYMRSDLITNCLVYAIS 412 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW I+RFRMER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 413 TGNWTIKRFRMERLGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 461 [33][TOP] >UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MR22_DROWI Length = 999 Score = 209 bits (533), Expect = 7e-53 Identities = 107/169 (63%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EARD+L +L HVPV + F K YVA+MVRR++ A LD DDRDYYGNKR Sbjct: 171 KTPPEEARDLLMTTILAHVPVDNFNFQMKAIYVALMVRRVMAAELDKTLFDDRDYYGNKR 230 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 231 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 289 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEK+RKVSGPR Sbjct: 290 SGNWTIKRFKMERGGVTQVLSRLSYISALGMMTRVNSQFEKSRKVSGPR 338 [34][TOP] >UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4GGQ4_DROPE Length = 1137 Score = 209 bits (533), Expect = 7e-53 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMSAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [35][TOP] >UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MH37_DROAN Length = 1137 Score = 209 bits (533), Expect = 7e-53 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPAEEARELLLTTILAHVPVDNFNFQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [36][TOP] >UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F57 Length = 1132 Score = 209 bits (532), Expect = 9e-53 Identities = 106/169 (62%), Positives = 138/169 (81%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468 [37][TOP] >UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4LKV4_DROVI Length = 1137 Score = 209 bits (532), Expect = 9e-53 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [38][TOP] >UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4J5G6_DROGR Length = 1137 Score = 209 bits (532), Expect = 9e-53 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLMSLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITVGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [39][TOP] >UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KPU7_DROMO Length = 1136 Score = 209 bits (531), Expect = 1e-52 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + F K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNFQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SL+FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLISLMFEDLFKRMNWELKMIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [40][TOP] >UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31AA Length = 1153 Score = 207 bits (526), Expect = 4e-52 Identities = 104/169 (61%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR Sbjct: 326 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 384 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LL FEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 385 LELAGQLLPFFFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 443 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 444 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 492 [41][TOP] >UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4P5Q3_DROYA Length = 1137 Score = 206 bits (525), Expect = 6e-52 Identities = 105/169 (62%), Positives = 130/169 (76%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [42][TOP] >UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup RepID=B4QC69_DROSI Length = 1137 Score = 206 bits (525), Expect = 6e-52 Identities = 105/169 (62%), Positives = 130/169 (76%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [43][TOP] >UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NS93_DROER Length = 1137 Score = 206 bits (525), Expect = 6e-52 Identities = 105/169 (62%), Positives = 130/169 (76%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSLMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [44][TOP] >UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila melanogaster RepID=RPC2_DROME Length = 1137 Score = 206 bits (525), Expect = 6e-52 Identities = 105/169 (62%), Positives = 130/169 (76%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ +EAR++L +L HVPV + K YV++MVRR++ A LD DDRDYYGNKR Sbjct: 309 KTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKR 368 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLS++FEDLFKR+N ++K AD + K +A QFDV K +R IT GLESA+S Sbjct: 369 LELAGSLLSMMFEDLFKRMNWELKTIADKNIPKV-KAAQFDVVKHMRAAQITAGLESAIS 427 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 428 SGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 476 [45][TOP] >UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A Length = 1141 Score = 206 bits (524), Expect = 7e-52 Identities = 103/169 (60%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +SK DE RD L +L H+PV + + K Y+A+M+RR++ L +DDRDYYGNKR Sbjct: 304 QSKTDETRDWLNTTLLAHIPVTDWNYHAKAVYLALMIRRIILTQLGYLEVDDRDYYGNKR 363 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 +ELAGGL+SLLFEDLFKR NS++K+ AD + K RA QFDV + +R D IT L A+S Sbjct: 364 MELAGGLISLLFEDLFKRFNSELKKIADLTIPKP-RAAQFDVVRHMRQDLITTSLVIAIS 422 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNWI++RF+MERKGVTQVL+RLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 423 SGNWIVKRFKMERKGVTQVLTRLSYISALGMMTRIASQFEKTRKVSGPR 471 [46][TOP] >UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata RepID=UPI000194E18E Length = 1280 Score = 205 bits (521), Expect = 2e-51 Identities = 105/169 (62%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR Sbjct: 450 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 508 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 509 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 567 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 568 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 616 [47][TOP] >UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911 Length = 1126 Score = 205 bits (521), Expect = 2e-51 Identities = 105/169 (62%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR Sbjct: 296 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 354 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 355 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 413 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 414 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 462 [48][TOP] >UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Gallus gallus RepID=UPI0000ECD29F Length = 1132 Score = 205 bits (521), Expect = 2e-51 Identities = 105/169 (62%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HV V + F K Y AVMVRR++ A + +DDRDYYGNKR Sbjct: 302 KTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENK-VDDRDYYGNKR 360 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD V+ K RA QFDV K +R D IT G+ +A+S Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQVIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPR 468 [49][TOP] >UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3YYC3_BRAFL Length = 1137 Score = 204 bits (519), Expect = 3e-51 Identities = 102/169 (60%), Positives = 135/169 (79%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +++V+EAR+VL +L HVPV ++ F K Y+A+MVRR++ A +DDRDYYGNKR Sbjct: 293 RTRVEEAREVLHSTILAHVPVVKFNFRLKCVYLALMVRRVVQAQAQDR-VDDRDYYGNKR 351 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LL+LLFEDLFK+ N+++K+ AD + K RA QFD+ K +R D IT GL +A+S Sbjct: 352 LELAGQLLALLFEDLFKKFNAELKKIADQTIPKP-RAAQFDIVKHMRQDQITNGLVNAIS 410 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 411 TGNWTVKRFKMDRAGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 459 [50][TOP] >UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8 Length = 1127 Score = 204 bits (518), Expect = 4e-51 Identities = 105/168 (62%), Positives = 129/168 (76%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S DE +DVLA +L HVPV + F K Y+A+MVR+++ A D +DDRDYYGNKRL Sbjct: 298 SITDEMKDVLASNILSHVPVIDFNFKLKATYLALMVRKVMIAQTDGKLVDDRDYYGNKRL 357 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364 ELAG LL+L+FEDLFKR N D+K AD + K +A QFD+ K +R D+IT GL A+SS Sbjct: 358 ELAGSLLALMFEDLFKRFNWDLKTIADKNIPKI-KAAQFDIVKHMRHDSITNGLAVAISS 416 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 417 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 464 [51][TOP] >UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31A9 Length = 1132 Score = 203 bits (516), Expect = 6e-51 Identities = 103/169 (60%), Positives = 136/169 (80%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A D +DDRDYYGNKR Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNK-VDDRDYYGNKR 360 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG + LL EDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 361 LELAGQVSLLLCEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPR 468 [52][TOP] >UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146 Length = 1134 Score = 202 bits (514), Expect = 1e-50 Identities = 103/168 (61%), Positives = 128/168 (76%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S DE +D LA +L HVPV + F K Y+A+M+R+++ A D +DDRDYYGNKRL Sbjct: 304 SITDEMKDALATNILSHVPVIDFNFKMKATYIALMIRKVMKAQSDGKLVDDRDYYGNKRL 363 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364 ELAG LLSL+FEDLFKR N ++K+ AD + K +A QFD+ K +R D IT GL A+SS Sbjct: 364 ELAGSLLSLMFEDLFKRFNWELKQIADKNIPKI-KAAQFDIVKHMRQDQITNGLAFAISS 422 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ SQFEKTRKVSGPR Sbjct: 423 GNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPR 470 [53][TOP] >UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JW67_SCHJY Length = 1160 Score = 202 bits (513), Expect = 1e-50 Identities = 104/167 (62%), Positives = 127/167 (76%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 +EA +VLA VVL H+ V F K YVA+M RR+L A++DP+ +DDRDY GNKRLELA Sbjct: 327 EEALEVLAAVVLAHISVVNLDFRPKAVYVAMMARRVLMAMVDPSQVDDRDYVGNKRLELA 386 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367 G LL+LLFEDLFK+ NSD+K D VL K NR +FD ++ D IT G+ ALS+G Sbjct: 387 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPNRTQEFDAYNQLSMHGDHITQGMVRALSTG 446 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER GVT VLSRLSFI+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 447 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGPR 493 [54][TOP] >UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4PBR7_USTMA Length = 1169 Score = 201 bits (510), Expect = 3e-50 Identities = 104/167 (62%), Positives = 123/167 (73%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 +EA DVLA V++ HVPV R F K Y+A MVRR+L A+ D +DDRDY GNKRLELA Sbjct: 331 EEALDVLATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMQDEKKVDDRDYVGNKRLELA 390 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESALSSG 367 G LLSLLFEDLFK+ NSD+K D VL K NR +FD D IT G A+S+G Sbjct: 391 GQLLSLLFEDLFKKFNSDLKMNIDKVLKKPNRTVEFDAFNQFHFNGDYITSGFVRAISTG 450 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER G+T VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR Sbjct: 451 NWSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 497 [55][TOP] >UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F58 Length = 1118 Score = 200 bits (509), Expect = 4e-50 Identities = 102/168 (60%), Positives = 134/168 (79%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA ++L HVPV + F K Y+AVMVRR++ A +DDRDYYGNKR Sbjct: 302 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNK-VDDRDYYGNKR 360 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLFEDLFK+ NS++K+ AD ++ K RA QFDV K +R D IT G+ +A+S Sbjct: 361 LELAGQLLSLLFEDLFKKFNSELKKIADQIIPK-QRAAQFDVVKHMRQDQITNGMVNAIS 419 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505 +GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++SQFEKTRK P Sbjct: 420 TGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKSDTP 467 [56][TOP] >UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO Length = 1165 Score = 198 bits (503), Expect = 2e-49 Identities = 100/167 (59%), Positives = 126/167 (75%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 +EA +VLA VVL H+ V +F K Y+ +M RR+L A++DP +DDRDY GNKRLELA Sbjct: 332 EEALEVLAAVVLAHINVFNLEFRPKAVYIGIMARRVLMAMVDPLQVDDRDYVGNKRLELA 391 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSG 367 G LL+LLFEDLFK+ NSD+K D VL K +R +FD + +D IT G+ ALS+G Sbjct: 392 GQLLALLFEDLFKKFNSDLKLNIDKVLKKPHRTQEFDAYNQLTVHSDHITQGMVRALSTG 451 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER GVT VLSRLS+I+A+GMMTR+TSQFEKTRKVSGPR Sbjct: 452 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKVSGPR 498 [57][TOP] >UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V2W9_MONBE Length = 1097 Score = 197 bits (502), Expect = 3e-49 Identities = 102/169 (60%), Positives = 127/169 (75%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++K D RD+L+ VVL HVP + F K ++++MVRR++ ++ D DDRDY GNKR Sbjct: 284 RTKEDMGRDLLSSVVLAHVPCENFDFRAKAVFLSLMVRRVIISMGDKMT-DDRDYLGNKR 342 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG L+SLLFED FK N+ +KRQAD LSK NR FD +R D IT L +A+S Sbjct: 343 LELAGSLMSLLFEDTFKNFNAQLKRQADVNLSK-NRVAAFDATNFMREDIITNSLRNAIS 401 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SGNWI++RF+MER GVT VLSRLSFIA++GMMTR+TSQFEKTRKVSGPR Sbjct: 402 SGNWILKRFKMERHGVTSVLSRLSFIASLGMMTRITSQFEKTRKVSGPR 450 [58][TOP] >UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M3E3_ENTHI Length = 1122 Score = 195 bits (496), Expect = 1e-48 Identities = 97/169 (57%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + K++EARDVLA++VL H+ V RY F KI Y+A+MV +L A + +DD+DYYGNKR Sbjct: 297 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYIALMVNWILKAD-ETGELDDKDYYGNKR 355 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 +ELAG L+SLLFEDLFK+ N+D++ A+ L+K +R+ FD+ K I IT GL +LS Sbjct: 356 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 415 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR Sbjct: 416 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 464 [59][TOP] >UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVW9_MALGO Length = 1131 Score = 195 bits (495), Expect = 2e-48 Identities = 99/167 (59%), Positives = 124/167 (74%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 DEA +VLA V++ HVPV + F K Y+A MVRR+L ++D + +DDRDY GNKRLELA Sbjct: 303 DEALEVLATVIMAHVPVEQGDFRNKTMYIATMVRRVLVCMVDESKVDDRDYVGNKRLELA 362 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSG 367 G LL+LLFEDLFK+ N D+K D VL K NR ++FD D IT G A+S+G Sbjct: 363 GQLLALLFEDLFKKFNFDLKTNIDKVLKKPNRTSEFDAYNQFFYHGDYITAGFVRAISTG 422 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 423 NWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 469 [60][TOP] >UniRef100_B0EDI3 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EDI3_ENTDI Length = 1115 Score = 194 bits (494), Expect = 2e-48 Identities = 97/169 (57%), Positives = 131/169 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + K++EARDVLA++VL H+ V RY F KI Y+A+MV +L A + +DD+DYYGNKR Sbjct: 316 RPKIEEARDVLANLVLPHIEVNRYNFKTKIIYLALMVNWILKAD-ETGELDDKDYYGNKR 374 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 +ELAG L+SLLFEDLFK+ N+D++ A+ L+K +R+ FD+ K I IT GL +LS Sbjct: 375 MELAGQLMSLLFEDLFKQFNTDLQNAANKGLTKKSRSETFDIIKCISPHRITQGLIHSLS 434 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR Sbjct: 435 TGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHFEKTRKVSGPR 483 [61][TOP] >UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EEL3_SCLS1 Length = 1230 Score = 194 bits (493), Expect = 3e-48 Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + +A + LA++++ HVPV F K Y+ MVRR+L A+++P +DDRDY GNKR Sbjct: 391 RNYIGDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPKLVDDRDYVGNKR 450 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355 LELAG LLSLLFEDLFK+ N+D+K D VL K NR +FD +++ + IT G+ A Sbjct: 451 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFDAYNHMQSHGNYITIGMNRA 510 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 511 ISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 561 [62][TOP] >UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XMI5_ASPFC Length = 1200 Score = 194 bits (492), Expect = 4e-48 Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA QFD ++ ++ IT G+ A Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533 [63][TOP] >UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D510_NEOFI Length = 1200 Score = 194 bits (492), Expect = 4e-48 Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 363 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 422 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA QFD ++ ++ IT G+ A Sbjct: 423 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRA 482 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 483 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 533 [64][TOP] >UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CN89_ASPTN Length = 1219 Score = 193 bits (490), Expect = 6e-48 Identities = 100/171 (58%), Positives = 124/171 (72%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + +A V++ H+ V F K YVA M RR+L A DP +DDRDY GNKR Sbjct: 381 RTHVQEAIEAIASVIISHIEVKNMNFRPKAIYVAHMARRVLMAKNDPTLVDDRDYLGNKR 440 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ T+ IT G+ A Sbjct: 441 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWSVMSMHTNHITQGMNRA 500 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 501 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551 [65][TOP] >UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V2J8_PHANO Length = 1443 Score = 192 bits (489), Expect = 8e-48 Identities = 99/166 (59%), Positives = 124/166 (74%), Gaps = 2/166 (1%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 EA + LA+VVL HVPV + K YVA+M RR+L A+ DP +DDRDY GNKRLEL+G Sbjct: 622 EAIECLANVVLPHVPVEGTNYRPKALYVALMARRVLMAMQDPKLVDDRDYVGNKRLELSG 681 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370 +LSLLFED FKR N D K D VL K NRA +FD ++ + IT G+E A+++GN Sbjct: 682 QMLSLLFEDHFKRFNHDFKLSIDKVLKKQNRAQEFDAFSHFSVHKNHITMGIERAIATGN 741 Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 742 WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 787 [66][TOP] >UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HTA4_PENCW Length = 1208 Score = 192 bits (489), Expect = 8e-48 Identities = 101/171 (59%), Positives = 124/171 (72%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ V EA + +A V++ H+ V F K YVA M RR+L A DPA +DDRDY GNKR Sbjct: 371 KTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKR 430 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355 LELAG +L+LLFEDLFK+ DIK D VL+K NRA QFD + + IT G+ A Sbjct: 431 LELAGQMLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRA 490 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 491 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 541 [67][TOP] >UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar RepID=C0PUS9_SALSA Length = 814 Score = 191 bits (486), Expect = 2e-47 Identities = 96/152 (63%), Positives = 124/152 (81%) Frame = +2 Query: 53 HVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFK 232 HVPV + F K Y+AVMVRR++ A + +DDRDYYGNKRLELAG LLSLLFEDLFK Sbjct: 1 HVPVKEFNFRAKCIYLAVMVRRVILAQGENK-VDDRDYYGNKRLELAGQLLSLLFEDLFK 59 Query: 233 RLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVT 412 + NS++K+ +D ++ K RA QFD+ K +R D IT G+ +A+S+GNW ++RF+M+R+GVT Sbjct: 60 KFNSELKKISDQIIPK-QRAAQFDIVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVT 118 Query: 413 QVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 QVLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 119 QVLSRLSFISALGMMTRISSQFEKTRKVSGPR 150 [68][TOP] >UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2URF4_ASPOR Length = 1180 Score = 191 bits (486), Expect = 2e-47 Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 342 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 401 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ ++ IT G+ A Sbjct: 402 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 461 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 462 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 512 [69][TOP] >UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8MYG2_ASPFN Length = 1218 Score = 191 bits (486), Expect = 2e-47 Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 380 RTHVQEAVEAIASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 439 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD--VAKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ ++ IT G+ A Sbjct: 440 LELAGQLLALLFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRA 499 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 500 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 550 [70][TOP] >UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CS37_ASPCL Length = 1246 Score = 190 bits (483), Expect = 4e-47 Identities = 98/171 (57%), Positives = 124/171 (72%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + EA + +A V++ H+ V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 409 RTHIQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKR 468 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD ++ + IT G+ A Sbjct: 469 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAWSVMSMHGNHITQGMNRA 528 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579 [71][TOP] >UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CEE6_YARLI Length = 1169 Score = 190 bits (482), Expect = 5e-47 Identities = 93/166 (56%), Positives = 122/166 (73%), Gaps = 2/166 (1%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 E + +A ++ H+ + F +K Y+AVM RR++ A+ DP IDDRDY GNKRLELAG Sbjct: 331 EGLEAVATSIIAHISINNMDFTEKALYIAVMTRRVIMAMADPKMIDDRDYVGNKRLELAG 390 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSGN 370 LLSLLFEDLFK+ NSD K D +L + NRA+ FD + T +IT G+ A+S+GN Sbjct: 391 QLLSLLFEDLFKKFNSDFKANIDKILKRPNRASMFDALLNLETHRGSITSGMNRAISTGN 450 Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 451 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 496 [72][TOP] >UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1HBD0_PARBA Length = 1205 Score = 190 bits (482), Expect = 5e-47 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 367 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 426 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 427 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 486 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 487 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 537 [73][TOP] >UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GLZ2_PARBD Length = 1209 Score = 190 bits (482), Expect = 5e-47 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579 [74][TOP] >UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SI08_PARBP Length = 1232 Score = 190 bits (482), Expect = 5e-47 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 409 RNYVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 468 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LLSLLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 469 LELAGQLLSLLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 528 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 529 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 579 [75][TOP] >UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DLE5_PICGU Length = 1156 Score = 190 bits (482), Expect = 5e-47 Identities = 92/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A+M RR+L + +P +DDRDY GNKRL Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +RA++FD + I ++ IT G+ A+ Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGMNRAI 437 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487 [76][TOP] >UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RUZ7_DEBHA Length = 1165 Score = 189 bits (481), Expect = 7e-47 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A M RR+L + +P +DDRDY GNKRL Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +RA++FD + I ++ IT GL A+ Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGLNRAI 442 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492 [77][TOP] >UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E0Z1_LODEL Length = 1157 Score = 189 bits (481), Expect = 7e-47 Identities = 93/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A+M RR++ A+ +P +DDRDY GNKRL Sbjct: 319 SQLQEGIEAIATTIVAHLTVSNLQFKEKAFYMAMMARRVVMAMHNPKMVDDRDYVGNKRL 378 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +R T+FD + I ++ IT GL A+ Sbjct: 379 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTTEFDALLSINIHSNNITMGLNRAI 438 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 439 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 488 [78][TOP] >UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B156 Length = 1156 Score = 189 bits (480), Expect = 9e-47 Identities = 92/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A+M RR+L + +P +DDRDY GNKRL Sbjct: 318 SQLQEGIEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRL 377 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +RA +FD + I ++ IT G+ A+ Sbjct: 378 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGMNRAI 437 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 438 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487 [79][TOP] >UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JTE0_AJEDS Length = 1204 Score = 189 bits (480), Expect = 9e-47 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 366 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 425 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 426 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 485 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 486 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 536 [80][TOP] >UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5GKN6_AJEDR Length = 1228 Score = 189 bits (480), Expect = 9e-47 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 390 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 449 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 450 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 509 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 510 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 560 [81][TOP] >UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R793_PICPG Length = 1158 Score = 189 bits (480), Expect = 9e-47 Identities = 92/166 (55%), Positives = 125/166 (75%), Gaps = 2/166 (1%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 E + +A+ ++ H+ V F +K Y+A+M RR++ A+ +P IDDRDY GNKRLELAG Sbjct: 328 EGVEAIANTIVAHISVEDLNFREKAIYLAIMTRRVVMAMHNPTMIDDRDYVGNKRLELAG 387 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSGN 370 L+SLLFEDLFK+ NSD K D +L K NRA++FD +I ++ IT G+ A+S+GN Sbjct: 388 QLMSLLFEDLFKKFNSDFKANIDKILKKPNRASEFDALLSINVHSNNITTGINRAISTGN 447 Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 W ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 448 WSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 493 [82][TOP] >UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0P0A1_AJECG Length = 1227 Score = 189 bits (480), Expect = 9e-47 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 559 [83][TOP] >UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R9I0_AJECN Length = 1186 Score = 189 bits (480), Expect = 9e-47 Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 357 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 416 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 417 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 476 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 477 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 527 [84][TOP] >UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2Q8V9_ASPNC Length = 1225 Score = 189 bits (480), Expect = 9e-47 Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + +A V++ H+ V F K YVA M RR+L A D + +DDRDY GNKR Sbjct: 387 RTHVQEAVEAIASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKR 446 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NRA FD I ++ IT G+ A Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRA 506 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557 [85][TOP] >UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE866 Length = 1165 Score = 189 bits (479), Expect = 1e-46 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A M RR+L + +P +DDRDY GNKRL Sbjct: 323 SQMQEGIEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRL 382 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +RA +FD + I ++ IT GL A+ Sbjct: 383 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRALEFDALLSINIHSNNITMGLNRAI 442 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 443 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 492 [86][TOP] >UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG RepID=B9Q403_TOXGO Length = 1324 Score = 189 bits (479), Expect = 1e-46 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR Sbjct: 459 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 518 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319 LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + + Sbjct: 519 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 578 Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499 TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS Sbjct: 579 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 638 Query: 500 GPR 508 GPR Sbjct: 639 GPR 641 [87][TOP] >UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PFT5_TOXGO Length = 1328 Score = 189 bits (479), Expect = 1e-46 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR Sbjct: 463 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 522 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319 LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + + Sbjct: 523 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 582 Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499 TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS Sbjct: 583 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 642 Query: 500 GPR 508 GPR Sbjct: 643 GPR 645 [88][TOP] >UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KDI3_TOXGO Length = 1332 Score = 189 bits (479), Expect = 1e-46 Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 KS VDEA DVL VVL H+ F K ++ +M+RR+L A DP+ +DD+DYYGNKR Sbjct: 467 KSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDPSLMDDKDYYGNKR 526 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKAI 319 LELAG LLSLLFEDLFKR + +K+QAD LS+ ++A D + + Sbjct: 527 LELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQARGGAGGLGSRKDEVPYPDCFRNL 586 Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499 TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFEK RKVS Sbjct: 587 PTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFEKGRKVS 646 Query: 500 GPR 508 GPR Sbjct: 647 GPR 649 [89][TOP] >UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KC33_CRYNE Length = 1129 Score = 189 bits (479), Expect = 1e-46 Identities = 99/167 (59%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 D A+ LA +VL HVPV F K Y+A M RR+L A++D +DDRDY GNKRLELA Sbjct: 309 DIAQQALAAMVLGHVPVRNMNFRPKCIYLATMARRVLMAMIDDHMVDDRDYVGNKRLELA 368 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367 G LLSLLFED FK NS++K++ D +L K NRA FD IR D IT ++S+G Sbjct: 369 GQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTG 428 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF +ER GVT VLSRLSFIAA+GMMTR++SQFEKTRKVSGPR Sbjct: 429 NWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPR 475 [90][TOP] >UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q59M52_CANAL Length = 1157 Score = 189 bits (479), Expect = 1e-46 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+ Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489 [91][TOP] >UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WLY1_CANDC Length = 1157 Score = 189 bits (479), Expect = 1e-46 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL Sbjct: 320 SQLQEGIEAIATTIIAHLTVSDLQFKEKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 379 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+ Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 439 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489 [92][TOP] >UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M3E6_CANTT Length = 1159 Score = 188 bits (478), Expect = 2e-46 Identities = 93/170 (54%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A ++ H+ V QF +K Y+A M RR++ A+ +P +DDRDY GNKRL Sbjct: 321 SQLQEGIEAIATTIVAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRL 380 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D VL K +R ++FD + I ++ IT GL A+ Sbjct: 381 ELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAI 440 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 441 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 490 [93][TOP] >UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HGH3_AJECH Length = 1227 Score = 188 bits (477), Expect = 2e-46 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 389 RNHVQEAIEAISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 448 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R QFD AI + IT G+ A Sbjct: 449 LELAGQLLALLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRA 508 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GM+TR++SQFEKTRKVSGPR Sbjct: 509 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMLTRISSQFEKTRKVSGPR 559 [94][TOP] >UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJT3_COPC7 Length = 1140 Score = 188 bits (477), Expect = 2e-46 Identities = 97/167 (58%), Positives = 123/167 (73%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 +EA + LA +VL HVPV F K +VA M RR+L A+ D + +DDRDY GNKRLELA Sbjct: 314 EEALEALATIVLAHVPVQGLDFRAKAIFVATMTRRVLMAMDDESMVDDRDYVGNKRLELA 373 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367 G LL+LLFEDLFK NS++K D VL K +R ++FD ++ D +T G A+S+G Sbjct: 374 GQLLALLFEDLFKTYNSNLKSAIDKVLKKPSRTSEFDAFNTMQMQGDHLTSGFVRAISTG 433 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 434 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 480 [95][TOP] >UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TQC8_VANPO Length = 1139 Score = 188 bits (477), Expect = 2e-46 Identities = 95/170 (55%), Positives = 125/170 (73%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S + E + +A V+ H+ V F +K YVA+M RR++ A+ +P +DDRDY GNKRL Sbjct: 311 SILQEGIEAIATTVIAHLTVEALDFREKALYVAMMARRVVMAMHNPKMVDDRDYVGNKRL 370 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D VL K NRA ++D +I ++ IT GL A+ Sbjct: 371 ELAGQLISLLFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAI 430 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 431 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 480 [96][TOP] >UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative (AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella nidulans RepID=C8VU19_EMENI Length = 1225 Score = 187 bits (475), Expect = 3e-46 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + +A V++ H+ V F K YVA M RR+L A D A +DDRDY GNKR Sbjct: 387 RTHVQEAVEAIASVIISHIEVKDMNFRPKAIYVANMARRVLMAKNDAALVDDRDYLGNKR 446 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL+K NR FD I ++ IT G+ A Sbjct: 447 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLNKRNRVEAFDAWSVIGMHSNHITQGMNRA 506 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 507 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 557 [97][TOP] >UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q75B52_ASHGO Length = 1141 Score = 187 bits (474), Expect = 5e-46 Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 2/168 (1%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190 + E + +A V+ H+ V F +K YVA+M RR++ A+ +P +DDRDY GNKRLEL Sbjct: 315 LQEGIEAIATTVIAHLTVEALDFREKALYVAMMTRRVIMAIHNPKMVDDRDYVGNKRLEL 374 Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364 AG L+SLLFEDLFK+ N+D K D VL K NRA +D +I ++ IT GL A+S+ Sbjct: 375 AGQLMSLLFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAIST 434 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 435 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 482 [98][TOP] >UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEU3_LACTC Length = 1144 Score = 187 bits (474), Expect = 5e-46 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S + E + +A V+ H+ V F +K Y+AVM RR++ A+ +P +DDRDY GNKRL Sbjct: 316 STLQEGIEAIATTVIAHLTVEALDFREKALYIAVMTRRVVMAMHNPKMVDDRDYVGNKRL 375 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ I+ GL A+ Sbjct: 376 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAMEYDALLSINVHSNNISSGLNRAI 435 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 436 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 485 [99][TOP] >UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q0_LACBS Length = 1142 Score = 187 bits (474), Expect = 5e-46 Identities = 97/167 (58%), Positives = 122/167 (73%), Gaps = 2/167 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 +EA + LA +VL HVPV F K +VA M RR+L A+ D +DDRDY GNKRLELA Sbjct: 316 EEALEALATIVLAHVPVNGLDFRSKAIFVATMTRRVLMAMQDENMVDDRDYVGNKRLELA 375 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESALSSG 367 G LL+LLFEDLFK NS++K D VL K +R ++FD ++ D +T G A+S+G Sbjct: 376 GQLLALLFEDLFKTYNSNLKIAIDKVLKKPSRTSEFDAYNTMQMQGDHLTSGFVRAISTG 435 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RF+MER GVT VLSRLSFI+A+GMMTR++SQFEKTRKVSGPR Sbjct: 436 NWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR 482 [100][TOP] >UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3LP81_PICST Length = 1155 Score = 187 bits (474), Expect = 5e-46 Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S + E + +A V+ H+ V QF +K Y+A M RR++ + +P +DDRDY GNKRL Sbjct: 320 SVLQEGIEAIATTVIAHITVADLQFREKALYIATMARRVVMTMHNPKMVDDRDYVGNKRL 379 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ NSD K D +L K +R ++FD + I ++ IT GL A+ Sbjct: 380 ELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAI 439 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489 [101][TOP] >UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces cerevisiae RepID=RPC2_YEAST Length = 1149 Score = 187 bits (474), Expect = 5e-46 Identities = 93/168 (55%), Positives = 124/168 (73%), Gaps = 2/168 (1%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190 + E + +A V+ H+ V F +K Y+A+M RR++ A+ +P IDDRDY GNKRLEL Sbjct: 320 LQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLEL 379 Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364 AG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+S+ Sbjct: 380 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 439 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 440 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 487 [102][TOP] >UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SHS2_RICCO Length = 1139 Score = 186 bits (473), Expect = 6e-46 Identities = 94/167 (56%), Positives = 129/167 (77%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K + A +L V L +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLE Sbjct: 304 KENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLE 363 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK + ++++R D VL+K NR+++FD+A+ I D IT GLE LS+G Sbjct: 364 LSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTG 423 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 N+ ++RF+M RKG+TQVL RLS+IA++GMMTR++ QFEK+RKVSGPR Sbjct: 424 NFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPR 470 [103][TOP] >UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDF9_POPTR Length = 1141 Score = 186 bits (472), Expect = 8e-46 Identities = 93/167 (55%), Positives = 129/167 (77%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K + A +L V + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLE Sbjct: 300 KENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLE 359 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK + +++++ AD +L K NR+++FD ++ I D+IT GLE ALS+G Sbjct: 360 LSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTG 419 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++RFRM RKGVTQVL RLS++A++G MTR++ QFEK+RKVSGPR Sbjct: 420 NWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPR 466 [104][TOP] >UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W234_PYRTR Length = 1167 Score = 186 bits (471), Expect = 1e-45 Identities = 96/166 (57%), Positives = 123/166 (74%), Gaps = 2/166 (1%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 EA + L++VVL HVPV + K YVA+M RR+L A+ +P +DDRDY GNKRLEL+G Sbjct: 386 EAIECLSNVVLPHVPVEGTNYRPKALYVALMARRVLMAMQNPKLVDDRDYVGNKRLELSG 445 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESALSSGN 370 +LSLLFED FKR N D K D VL K RA +FD ++ + IT G+E A+++GN Sbjct: 446 QMLSLLFEDHFKRFNHDFKLSIDKVLKKPVRAQEFDAFSHFSVHKNHITMGVERAIATGN 505 Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 W ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 506 WSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 551 [105][TOP] >UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YHY2_NECH7 Length = 1156 Score = 185 bits (470), Expect = 1e-45 Identities = 94/171 (54%), Positives = 119/171 (69%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V+E D LA++V+ HVP+ F K YVA+M R++L A +P +DDRD+ GNKR Sbjct: 315 RNHVEEGLDALANLVIAHVPIEELDFYPKAIYVAMMTRKVLMAAHNPKLVDDRDFVGNKR 374 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355 LELAG LLSLLFEDLFKR ++K D L K NRA D I +TI G+ A Sbjct: 375 LELAGQLLSLLFEDLFKRFTVEVKMSIDKFLKKNNRAVPLDAVHMISNHANTIGIGINRA 434 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 435 IQTGNWSVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485 [106][TOP] >UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y486_CLAL4 Length = 1159 Score = 185 bits (470), Expect = 1e-45 Identities = 89/170 (52%), Positives = 126/170 (74%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++ E + +A V+ H+ V F +K Y+A+M R++L + +P+ +DDRDY GNKRL Sbjct: 320 SQLQEGIEAIATTVIAHLTVSDLNFREKALYIAIMARKVLMTMHNPSMVDDRDYVGNKRL 379 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ N+D K D +L K +R ++FD + I ++ IT G+ A+ Sbjct: 380 ELAGQLMSLLFEDLFKKFNTDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGMNRAI 439 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 440 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 489 [107][TOP] >UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JMP0_UNCRE Length = 1202 Score = 185 bits (470), Expect = 1e-45 Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + EA + +A V++ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 364 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKR 423 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A Sbjct: 424 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 483 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 484 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 534 [108][TOP] >UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E0C8 Length = 1157 Score = 185 bits (469), Expect = 2e-45 Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V+E D LA++V+ HVP+ F K YVA+M RR+L A +P +DDRD+ GNKR Sbjct: 315 RNHVEEGLDALANLVIAHVPIEGLDFYPKAIYVAMMTRRVLIAAHNPKLVDDRDFVGNKR 374 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355 LELAG LLSLLFEDLFK+ ++++ D L K NRA D I + I YG+ A Sbjct: 375 LELAGQLLSLLFEDLFKQFTTNVRMSIDKFLKKNNRAVPLDAVNMISNHANNIGYGINRA 434 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 435 IQTGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 485 [109][TOP] >UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FLJ9_CANGA Length = 1133 Score = 185 bits (469), Expect = 2e-45 Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 2/168 (1%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190 + E + +A ++ H+ V F +K Y+A M RR++ A+ +P +DDRDY GNKRLEL Sbjct: 308 LQEGIEAIATTIIAHLTVEALDFREKALYIATMTRRVVMAMHNPKMVDDRDYVGNKRLEL 367 Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSS 364 AG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+S+ Sbjct: 368 AGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAIST 427 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 428 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 475 [110][TOP] >UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CLR1_KLULA Length = 1142 Score = 185 bits (469), Expect = 2e-45 Identities = 92/170 (54%), Positives = 123/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S + E + +A V+ H+ V F +K Y+A+M RR++ A+ +P +DDRDY GNKRL Sbjct: 314 SILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAIDNPKMVDDRDYVGNKRL 373 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ N+D K D VL K NRA +D I ++ IT G+ A+ Sbjct: 374 ELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAEMYDALLTINVHSNNITTGMNRAI 433 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 434 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 483 [111][TOP] >UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FVS4_NANOT Length = 1211 Score = 185 bits (469), Expect = 2e-45 Identities = 98/171 (57%), Positives = 121/171 (70%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ V EA + ++ V++ HV V F K YV M RR+L A LDP+ +DDRDY GNKR Sbjct: 373 RNYVAEAIEAISSVIISHVQVQDMNFRPKALYVTYMARRVLMAKLDPSLVDDRDYVGNKR 432 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A Sbjct: 433 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRA 492 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +++GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 493 IATGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543 [112][TOP] >UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q27492_CAEEL Length = 1154 Score = 184 bits (468), Expect = 2e-45 Identities = 96/167 (57%), Positives = 121/167 (72%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K EA D L++ ++ H+ P F K Y+ +M RR++ L +DDRD+YGNKRLE Sbjct: 317 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGLMTRRLIQTELGENGLDDRDFYGNKRLE 376 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LLSLLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G Sbjct: 377 LAGSLLSLLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 435 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR Sbjct: 436 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 482 [113][TOP] >UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA Length = 1104 Score = 184 bits (467), Expect = 3e-45 Identities = 94/164 (57%), Positives = 120/164 (73%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 EA D L+++++ HVP P K Y+ +MVRR++ A + DDRD+YGNKRLELAG Sbjct: 301 EAIDFLSNLMIAHVPCPDGNMKMKAVYLGLMVRRLMQAEVGDTECDDRDFYGNKRLELAG 360 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376 LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT L AL++GNW Sbjct: 361 SLLALLFEDVFKRFNSELKRIADNSLGKT-LAAPLDIVKHVRQDLITNALVDALATGNWT 419 Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 I+RF+MER+GVTQVLSRLS+I+ +GMMTR+ S FEKTRKVSGPR Sbjct: 420 IKRFKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPR 463 [114][TOP] >UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CFA7 Length = 1137 Score = 183 bits (465), Expect = 5e-45 Identities = 95/170 (55%), Positives = 123/170 (72%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K+ VD+A D+LA+ +L HV V ++ +K Y+ +MVRR+L A DP D D+YGNK Sbjct: 306 KNVVDDAGDILANTILAHVDVLDFRCMCEKTQYLGLMVRRILQAETDPRFYTDLDHYGNK 365 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358 RLELAG +L LLFED KR N ++K AD ++ K +A QFD+ K +R D IT G +A+ Sbjct: 366 RLELAGAMLGLLFEDFLKRYNLELKMIADKMIPKI-KAAQFDIVKHLRQDFITNGFSNAI 424 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW I+RFRM +GVTQVLSRLS+I+A GMMTR+ S FEKTRKVSGPR Sbjct: 425 STGNWTIKRFRMHTQGVTQVLSRLSYISAFGMMTRVNSHFEKTRKVSGPR 474 [115][TOP] >UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q9P6E7_NEUCR Length = 1155 Score = 183 bits (465), Expect = 5e-45 Identities = 93/171 (54%), Positives = 121/171 (70%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ +E D LA++V+ HV V F K Y+A+MVRR+L A +P +DDRD+ GNKR Sbjct: 316 RNHAEEGLDALANLVIAHVTVEGLDFYPKAVYIAMMVRRVLMAAQNPKLVDDRDFVGNKR 375 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD--TITYGLESA 355 LELAG L+SLLFEDLFK+ SD+K D K NR + +D AI + I++GL A Sbjct: 376 LELAGQLISLLFEDLFKKFISDVKYNIDNFFKKPNRTSTYDPHGAIMANGHYISHGLNRA 435 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + SGNW ++RF M R G+T VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 436 IQSGNWTVKRFNMNRAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486 [116][TOP] >UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DY85_ZYGRC Length = 1143 Score = 183 bits (465), Expect = 5e-45 Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S + E + +A V+ H+ V F +K Y+A+M RR++ A+ + +DDRDY GNKRL Sbjct: 315 SVLQEGIEAIATTVIAHLTVAALDFREKALYIAMMTRRVVMAMQNYKMVDDRDYVGNKRL 374 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESAL 358 ELAG L+SLLFEDLFK+ N+D K D VL K NRA ++D +I ++ IT GL A+ Sbjct: 375 ELAGQLISLLFEDLFKKFNNDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLSRAI 434 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKVSGPR Sbjct: 435 STGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPR 484 [117][TOP] >UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MJE1_TALSN Length = 1212 Score = 182 bits (463), Expect = 9e-45 Identities = 98/171 (57%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ ++EA + ++ VV+ HV V F K YVA M RR+L A DP+ +DDRDY GNKR Sbjct: 374 KTHIEEAIEAISSVVISHVEVTNMDFRPKAIYVANMARRVLMAKHDPSMVDDRDYVGNKR 433 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK VL K R FD A+ + IT+G+ A Sbjct: 434 LELAGQLLALLFEDLFKKFCFDIKMNITKVLGKRRREI-FDAMSVVALHGNHITHGMNRA 492 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543 [118][TOP] >UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon pisum RepID=UPI00017918AB Length = 1112 Score = 182 bits (462), Expect = 1e-44 Identities = 89/166 (53%), Positives = 120/166 (72%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190 + E D L+ V+L H+PV + K Y ++MVRR+++++ +P D +DYYGNK L+L Sbjct: 288 ITEVHDFLSTVILAHIPVTNTNYHMKAIYTSIMVRRLIFSLSNPDLFDSKDYYGNKCLDL 347 Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGN 370 G LSLLF+D FKR ++K AD + K +AT FD+ K IRTDTIT L A+ +GN Sbjct: 348 PGSFLSLLFDDTFKRFTFELKSVADKNIPKV-KATPFDIIKYIRTDTITNALVFAIQTGN 406 Query: 371 WIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 W I+RFRMER GVTQVL+RLS+++A+GMMTR+ SQFEK+RKVSGPR Sbjct: 407 WSIKRFRMERHGVTQVLTRLSYLSAIGMMTRVNSQFEKSRKVSGPR 452 [119][TOP] >UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM Length = 1233 Score = 182 bits (462), Expect = 1e-44 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ + EA + +A V++ HV V F K YVA M RR+L A D + +DDRDY GNKR Sbjct: 395 RNYIQEAVEAIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKR 454 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDV--AKAIRTDTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK D VL K R FD AI + IT G+ A Sbjct: 455 LELAGQLLALLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRA 514 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 515 ISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 565 [120][TOP] >UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4R1B6_MAGGR Length = 1158 Score = 182 bits (462), Expect = 1e-44 Identities = 93/171 (54%), Positives = 122/171 (71%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ +E + LA++++ HVP+ F K YVA+MVRR+L A D +DDRD+ GNKR Sbjct: 318 RNNAEEGLEALANMIIGHVPILDLDFYPKACYVAMMVRRVLMAAHDHKLVDDRDFVGNKR 377 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDT--ITYGLESA 355 LELAG +LSLLFEDLFK+ D++ D VL K+NR FD +I + IT G+ A Sbjct: 378 LELAGQMLSLLFEDLFKKFLVDLRFNIDKVLRKSNRGVAFDPLNSITATSGHITAGMNRA 437 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +SSGNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 438 ISSGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 488 [121][TOP] >UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri RepID=B6VBN7_CAEBE Length = 1152 Score = 182 bits (461), Expect = 1e-44 Identities = 95/167 (56%), Positives = 120/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K EA D L++ ++ H+ P F K Y+ M RR++ L +DDRD+YGNKRLE Sbjct: 316 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTELGENELDDRDFYGNKRLE 375 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G Sbjct: 376 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 434 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR Sbjct: 435 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 481 [122][TOP] >UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI Length = 1105 Score = 181 bits (460), Expect = 2e-44 Identities = 91/171 (53%), Positives = 118/171 (69%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ ++E D L+++++ H+PV F K YVA M RR+L A + + +DDRD+ GNKR Sbjct: 316 KNNIEEGMDALSNLIIAHIPVEGLDFYPKAIYVAFMTRRVLMAQANMSLVDDRDFVGNKR 375 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESA 355 LELAG LLSLLFEDLFK+ D+K D VL K NRA D I + I G+ A Sbjct: 376 LELAGQLLSLLFEDLFKKFCGDVKASIDKVLKKDNRAVAMDAVTMISNHANNIGQGINRA 435 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + +GNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPR Sbjct: 436 IQTGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPR 486 [123][TOP] >UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16 RepID=A8WJV6_CAEBR Length = 1160 Score = 181 bits (459), Expect = 2e-44 Identities = 94/167 (56%), Positives = 120/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K EA D L++ ++ H+ P F K Y+ M RR++ + +DDRD+YGNKRLE Sbjct: 302 KEHEAVDFLSNSMITHIACPDGNFKMKAIYLGQMTRRLIQTEMGENELDDRDFYGNKRLE 361 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+LLFED+FKR NS++KR AD L K A D+ K +R D IT + +A+S+G Sbjct: 362 LAGSLLALLFEDVFKRFNSELKRIADNALMKT-MAAPLDIVKHMRQDMITNTIVNAMSTG 420 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S FEKTRKVSGPR Sbjct: 421 NWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSGPR 467 [124][TOP] >UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI Length = 1146 Score = 180 bits (456), Expect = 6e-44 Identities = 86/160 (53%), Positives = 125/160 (78%) Frame = +2 Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208 +L + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLEL+G L+S Sbjct: 303 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 362 Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388 LLFEDLFK + S++K+ DA+L+K +R+++FD ++ I D+IT GLE LS+GNW ++RF Sbjct: 363 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLSTGNWDVKRF 422 Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 RM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR Sbjct: 423 RMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 462 [125][TOP] >UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001985A70 Length = 1142 Score = 177 bits (450), Expect = 3e-43 Identities = 86/163 (52%), Positives = 126/163 (77%), Gaps = 3/163 (1%) Frame = +2 Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208 +L + +VPV + F K YVAVM+RRM+ A+L+ +DD+DY GNKRLEL+G L+S Sbjct: 308 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 367 Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIR---TDTITYGLESALSSGNWII 379 LLFEDLFK + S++K+ DA+L+K +R+++FD ++ +R D+IT GLE LS+GNW + Sbjct: 368 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDV 427 Query: 380 RRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +RFRM RKG++QV++RLS+I ++G MT+++ QFEK+RKVSGPR Sbjct: 428 KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPR 470 [126][TOP] >UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHR9_PENMQ Length = 1212 Score = 177 bits (449), Expect = 4e-43 Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+ ++EA + ++ V++ HV V F K YVA M RR+L A D +DDRDY GNKR Sbjct: 374 KTHIEEAIEAISSVIISHVEVTDMDFRPKAIYVANMARRVLMAKHDSDMVDDRDYVGNKR 433 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355 LELAG LL+LLFEDLFK+ DIK VL K R FD + + IT+G+ A Sbjct: 434 LELAGQLLALLFEDLFKKFQFDIKMNITKVLGKRRREI-FDAMSVVTLHGNHITHGMNRA 492 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 493 ISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 543 [127][TOP] >UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295 Length = 1161 Score = 176 bits (445), Expect = 1e-42 Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K A +L + L HVPVP F QK YV VM+RRM+ A+L+ +DD+DY GNKRLE Sbjct: 311 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 370 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358 L+G L+SLLFEDLFK + S+ + D +L+K RA++FD ++ + D +I+ GLE L Sbjct: 371 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 430 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR Sbjct: 431 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 480 [128][TOP] >UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9FKF1_ARATH Length = 1194 Score = 176 bits (445), Expect = 1e-42 Identities = 91/170 (53%), Positives = 124/170 (72%), Gaps = 3/170 (1%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K A +L + L HVPVP F QK YV VM+RRM+ A+L+ +DD+DY GNKRLE Sbjct: 332 KDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLE 391 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTD---TITYGLESAL 358 L+G L+SLLFEDLFK + S+ + D +L+K RA++FD ++ + D +I+ GLE L Sbjct: 392 LSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTL 451 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+++ QFEK+RKVSGPR Sbjct: 452 STGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPR 501 [129][TOP] >UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GW04_CHAGB Length = 1155 Score = 175 bits (444), Expect = 1e-42 Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +S V+E D LA++++ HV + F K Y+++MVRR+L A +P +DDRD+ GNKR Sbjct: 316 RSPVEEGLDALANIIIAHVTIKDLDFYPKSIYISMMVRRVLMAAHNPRLVDDRDFVGNKR 375 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355 LELAG LLSLLFED+FK +K + K NR + +D I + IT GL A Sbjct: 376 LELAGQLLSLLFEDMFKMFVGGLKGNMEYFFKKPNRTSAYDPVGPISSQGQYITQGLNRA 435 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 436 IQSGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 486 [130][TOP] >UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus RepID=UPI000179EFE0 Length = 796 Score = 175 bits (443), Expect = 2e-42 Identities = 90/134 (67%), Positives = 113/134 (84%) Frame = +2 Query: 107 MVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN 286 MVRR++ A D +DDRDYYGNKRLELAG LLSLLFEDLFK+ NS++K+ AD V+ K Sbjct: 1 MVRRVILAQGDNK-VDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-Q 58 Query: 287 RATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 466 RA QFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR+ Sbjct: 59 RAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRI 118 Query: 467 TSQFEKTRKVSGPR 508 +SQFEKTRKVSGPR Sbjct: 119 SSQFEKTRKVSGPR 132 [131][TOP] >UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii RepID=Q5NVB0_PONAB Length = 1116 Score = 174 bits (441), Expect = 3e-42 Identities = 94/168 (55%), Positives = 122/168 (72%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K+K++EAR++LA +L HVPV + F K Y AVMVRR++ A D +DDRDYYGNKR Sbjct: 303 KTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNK-VDDRDYYGNKR 361 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LLSLLF DLFK+ NS++K+ AD V+ K RA QFDV +A+S Sbjct: 362 LELAGQLLSLLFGDLFKKFNSEMKKIADQVIPK-QRAAQFDVVNTCAKTRSPMAWVNAIS 420 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 505 +GNW ++RF+M+R+ V QVL RL +I+A+GMMTR++SQFEKTRKVS P Sbjct: 421 TGNWSLKRFKMDRQ-VNQVLYRLLYISALGMMTRISSQFEKTRKVSVP 467 [132][TOP] >UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Z6F6_SORBI Length = 1137 Score = 172 bits (437), Expect = 9e-42 Identities = 90/168 (53%), Positives = 116/168 (69%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 +K + +L V + HVPV K Y AVM+RRML A+L+ DD+DY GNKR Sbjct: 293 NKEGRSNSILHDVFIAHVPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRF 352 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSS 364 EL+G L+SLLFEDLFK +NS + + K R++ D ++ I DTIT+GLE A+S+ Sbjct: 353 ELSGQLISLLFEDLFKTMNSQAVERMNKNSDKT-RSSPLDFSQLIMQDTITFGLERAIST 411 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GNW I+RFRM RKGV+QVLSRLS++A +G MTR+T QFEKTRK SGPR Sbjct: 412 GNWDIKRFRMHRKGVSQVLSRLSYMATLGYMTRITPQFEKTRKTSGPR 459 [133][TOP] >UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2B0Z1_PODAN Length = 1160 Score = 172 bits (435), Expect = 2e-41 Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ ++E D L+++++ HV V F K Y+A+MVRR+L AV +P +DDRD+ GNKR Sbjct: 321 RNPIEEGLDALSNLIVAHVTVKDLDFYPKTIYIAMMVRRILMAVHNPELVDDRDFVGNKR 380 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYGLESA 355 LELAG LLSLLFEDL K +K + + NR + +D I + IT GL A Sbjct: 381 LELAGQLLSLLFEDLLKGFIGQLKANMEHFFKRPNRTSAYDPIGPIGSYGTMITQGLNRA 440 Query: 356 LSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPR Sbjct: 441 IQSGNWTVKRFGMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPR 491 [134][TOP] >UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q236N3_TETTH Length = 1141 Score = 171 bits (434), Expect = 2e-41 Identities = 82/175 (46%), Positives = 124/175 (70%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++ VDEARD++ +VVLCH+P Y + + ++ +M RR++ A+ DP+ ID RDYYGNKR Sbjct: 290 RNPVDEARDIITNVVLCHIPCKNYNYYPRAIFLGLMARRLIEALDDPSKIDKRDYYGNKR 349 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT------DTITYG 343 ++ AG L LLFED FK+ N ++++ + K ++ + + + + D IT G Sbjct: 350 MKCAGWYLELLFEDKFKQFNMMVRKELSKEIEK-HKNKSYPIKNRVESILEKNHDIITQG 408 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 L +A+S+GNW I+RFRM+ GVTQVL+R+S+IAA+GMMTRM SQF+K+RK++GPR Sbjct: 409 LNNAISTGNWTIKRFRMDTVGVTQVLARISYIAAIGMMTRMNSQFKKSRKLTGPR 463 [135][TOP] >UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q84R88_ORYSJ Length = 1174 Score = 171 bits (433), Expect = 3e-41 Identities = 88/167 (52%), Positives = 119/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE Sbjct: 331 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 390 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G Sbjct: 391 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 449 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR Sbjct: 450 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 496 [136][TOP] >UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q10JZ3_ORYSJ Length = 1155 Score = 171 bits (433), Expect = 3e-41 Identities = 88/167 (52%), Positives = 119/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477 [137][TOP] >UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q10JZ2_ORYSJ Length = 1039 Score = 171 bits (433), Expect = 3e-41 Identities = 88/167 (52%), Positives = 119/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE Sbjct: 312 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 371 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G Sbjct: 372 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 430 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR Sbjct: 431 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 477 [138][TOP] >UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9F8X6_ORYSJ Length = 1115 Score = 171 bits (433), Expect = 3e-41 Identities = 88/167 (52%), Positives = 119/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE Sbjct: 372 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 431 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G Sbjct: 432 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 490 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR Sbjct: 491 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 537 [139][TOP] >UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8AR02_ORYSI Length = 1117 Score = 171 bits (433), Expect = 3e-41 Identities = 88/167 (52%), Positives = 119/167 (71%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 K ++ +L V + HVPV F K Y AVM+RRM+ A+L+ DD+DY GNKRLE Sbjct: 374 KEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLE 433 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 L+G L+SLLFEDLFK +NS+ + K + ++ D++ I+ + IT+GLE A+S+G Sbjct: 434 LSGQLISLLFEDLFKTMNSNAVELMNKTSEKIH-SSPLDLSLHIKENIITHGLERAISTG 492 Query: 368 NWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFEKTRK SGPR Sbjct: 493 NWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPR 539 [140][TOP] >UniRef100_Q2N123 RNA polymerase III second largest subunit (Fragment) n=1 Tax=Leucosolenia sp. AR-2003 RepID=Q2N123_9METZ Length = 404 Score = 170 bits (430), Expect = 6e-41 Identities = 85/149 (57%), Positives = 116/149 (77%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 ++KV+EA + LA+++L HVPV + F K AY+A+MVRR+L A D DDRDYYGNKR Sbjct: 257 RTKVEEALEALANIILAHVPVVEFNFRLKTAYMALMVRRVLQAQGDMESADDRDYYGNKR 316 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 LELAG LL+LLFEDLFK+LN+++K+ AD + +K RA FD+ K +R D IT GL ++S Sbjct: 317 LELAGQLLALLFEDLFKKLNTELKQFADKMANKP-RAEPFDITKQMRPDIITNGLVHSIS 375 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAM 448 +GNW ++RF+M+R GVTQVLSRLS+I+A+ Sbjct: 376 TGNWSVKRFKMDRAGVTQVLSRLSYISAL 404 [141][TOP] >UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3LB54_PLAKH Length = 1401 Score = 167 bits (422), Expect = 5e-40 Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 15/184 (8%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK Sbjct: 510 KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 569 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316 RLELAG L+SLLFEDL+KR +K+Q D LSK ++ T DV ++ Sbjct: 570 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNETYPDVFRS 629 Query: 317 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496 + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV Sbjct: 630 LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 689 Query: 497 SGPR 508 SGPR Sbjct: 690 SGPR 693 [142][TOP] >UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K0G6_PLAVI Length = 1427 Score = 166 bits (421), Expect = 6e-40 Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 15/184 (8%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + +DD+DYYGNK Sbjct: 507 KDIIEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDGANNKNELDDKDYYGNK 566 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRA--------------TQFDVAKA 316 RLELAG L+SLLFEDL+KR +K+Q D LSK ++ T DV ++ Sbjct: 567 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNVNDTYPDVFRS 626 Query: 317 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 496 + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RKV Sbjct: 627 LPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKV 686 Query: 497 SGPR 508 SGPR Sbjct: 687 SGPR 690 [143][TOP] >UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae RepID=Q6E6F3_ANTLO Length = 1014 Score = 166 bits (421), Expect = 6e-40 Identities = 87/170 (51%), Positives = 116/170 (68%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 S++DEAR +L VVL ++P +K VA+M+R +L A L+ +DD D+ GNKR Sbjct: 212 SRIDEARTILYEVVLPNIPNDGIDMRRKAITVAIMIRVLLQAELNMISMDDIDFLGNKRF 271 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358 ELAG LLS+LFED F R NS++K+ D VLSK+ R D ++ + I+ A+ Sbjct: 272 ELAGNLLSILFEDTFLRFNSELKKSIDKVLSKSQRTQDLDALTFLNLQVNLISNSFVRAI 331 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW +RRFRMER GVTQVLSRLS+IA +G M ++ SQFEKTRK+SGPR Sbjct: 332 STGNWTVRRFRMERAGVTQVLSRLSYIAMIGSMAKIQSQFEKTRKISGPR 381 [144][TOP] >UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD48_SCHMA Length = 1126 Score = 166 bits (420), Expect = 8e-40 Identities = 86/164 (52%), Positives = 116/164 (70%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 E + L +++ HV + + FA + ++ MVR ++ A ++DRD+YGNKR+ELAG Sbjct: 284 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPVNDRDFYGNKRIELAG 343 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376 LL+LLFED+FK N D+ + +K R T FD+++ I+T IT L A+SSGNWI Sbjct: 344 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 402 Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR Sbjct: 403 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 446 [145][TOP] >UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD47_SCHMA Length = 1128 Score = 166 bits (419), Expect = 1e-39 Identities = 87/164 (53%), Positives = 115/164 (70%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 E + L +++ HV + + FA + ++ MVR ++ A DDRD+YGNKR+ELAG Sbjct: 297 EIQRFLRDIIITHVEMEKLNFAPRAFFLGQMVRYLILANEKRIPPDDRDFYGNKRIELAG 356 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376 LL+LLFED+FK N D+ + +K R T FD+++ I+T IT L A+SSGNWI Sbjct: 357 SLLALLFEDVFKTFNEDLWLTVSKIDTK-RRCTPFDISRHIKTWMITEQLNRAISSGNWI 415 Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 I+RFRM R GVTQV+SRLS++AA+G MTRMTSQFEKTRKVSGPR Sbjct: 416 IKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQFEKTRKVSGPR 459 [146][TOP] >UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi RepID=Q4D9P5_TRYCR Length = 1130 Score = 165 bits (418), Expect = 1e-39 Identities = 86/175 (49%), Positives = 116/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169 KSK D A + L +V+LCH+ + Q F K YV MVRRM+ A +D + +D+RD+Y Sbjct: 305 KSKADNAAEFLGNVLLCHIREGQVQRDWNFRHKALYVCFMVRRMIEASVDSSLLDERDFY 364 Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343 GNKR E G L+ LLFEDL K+ N +K D LSK + F+V + + + + I G Sbjct: 365 GNKRFETTGTLMGLLFEDLLKQFNRVVKTAMDQQLSKKDTTKAFNVKQLMESKLEVIQSG 424 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + ALSSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEK+RK+SGPR Sbjct: 425 MRVALSSGRWELKRFNMSRQGITQVLSRLSYIACIGMMTRLASSFEKSRKISGPR 479 [147][TOP] >UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S5S8_TRIAD Length = 1016 Score = 165 bits (418), Expect = 1e-39 Identities = 90/177 (50%), Positives = 117/177 (66%), Gaps = 8/177 (4%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 K VDEARD+LA+VVL H+P + +DD+DYYGNKR Sbjct: 221 KLPVDEARDLLANVVLSHIP---------------------------SILDDKDYYGNKR 253 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKAN--------RATQFDVAKAIRTDTIT 337 LELAG LL+LLFEDLFK+ NS++K A+ + K R +FD+ K +R D IT Sbjct: 254 LELAGQLLALLFEDLFKKFNSELKSIAEKNIPKQRAGPVNMNLRFLEFDIVKYMRQDQIT 313 Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 G AL++GNW I+R++M+R GVTQVLSRLS+++A+GMMTR++SQFEKTRKVSGPR Sbjct: 314 NGFNLALTTGNWSIKRYKMDRAGVTQVLSRLSYLSALGMMTRISSQFEKTRKVSGPR 370 [148][TOP] >UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis RepID=A4HBG9_LEIBR Length = 1125 Score = 165 bits (418), Expect = 1e-39 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169 +SK D+A + LA+V+LCH+ + Q F K YV MVR M+ A D + +D+RD+Y Sbjct: 300 RSKADKAAEFLANVLLCHIRESQMQKDWNFRHKAFYVCFMVRGMIEASFDASLLDERDFY 359 Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343 GNKR E G L++LLFEDL K+ N +K D LSK + F+V + + + + I G Sbjct: 360 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSKRDSTRPFNVKQLMESKMEVIQNG 419 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + A+SSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEKTRKVSGPR Sbjct: 420 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIACLGMMTRLASSFEKTRKVSGPR 474 [149][TOP] >UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I5X9_PLAF7 Length = 1450 Score = 164 bits (416), Expect = 2e-39 Identities = 90/185 (48%), Positives = 122/185 (65%), Gaps = 16/185 (8%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + + IDD+DYYGNK Sbjct: 530 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNEIDDKDYYGNK 589 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF---------------DVAK 313 RLELAG L+SLLFEDL+KR +K+Q D LSK ++ DV + Sbjct: 590 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYNSKLRSTGNNMNDNYPDVFR 649 Query: 314 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 493 + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFEK RK Sbjct: 650 NLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRK 709 Query: 494 VSGPR 508 VSGPR Sbjct: 710 VSGPR 714 [150][TOP] >UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major RepID=Q4QD43_LEIMA Length = 1132 Score = 164 bits (416), Expect = 2e-39 Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169 +SK D+A + LA+V+LCH+ + Q F K YV MVR M+ A D + +D+RD+Y Sbjct: 307 RSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDTSLLDERDFY 366 Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343 GNKR E G L++LLFEDL K+ N +K D LS+ + F+V + + + + I G Sbjct: 367 GNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSRKDSTRPFNVKQLMESKMEVIQNG 426 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + A+SSG W ++RF M R+G+TQVLSRLS+IA++GMMTR+ S FEKTRKVSGPR Sbjct: 427 MRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGPR 481 [151][TOP] >UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma brucei RepID=C9ZHX4_TRYBG Length = 1129 Score = 164 bits (416), Expect = 2e-39 Identities = 85/175 (48%), Positives = 117/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQ----FAQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169 KSK D A + LA+V+LCH+ Q F K YV MVRRM+ A +D + +D+RD+Y Sbjct: 304 KSKADSAAEFLANVLLCHIREGEVQRDWNFRHKALYVCFMVRRMVEASVDSSLLDERDFY 363 Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRT--DTITYG 343 GNKR E G L+ LLFEDL K+ N +K D +LSK + F++ + + + + I G Sbjct: 364 GNKRFETTGTLMGLLFEDLLKQYNRVVKTAMDQLLSKKDTTKPFNLKQLMESKMEVIQNG 423 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + ALSSG W ++RF M R+G+TQVLSRLS+I+ +GMMTR+ S FEK+RK+SGPR Sbjct: 424 MRVALSSGRWELKRFNMSRQGITQVLSRLSYISCIGMMTRLASSFEKSRKISGPR 478 [152][TOP] >UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQY8_ENCCU Length = 1110 Score = 162 bits (410), Expect = 1e-38 Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 ++++E VL+ VL +V + +K Y+A+MVRR+ L+ DD+D+ GNKR Sbjct: 284 NRIEEVLTVLSEKVLPNVQIEGCDLRKKGIYIALMVRRLAQTKLNILREDDKDFVGNKRF 343 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAK--AIRTDTITYGLESAL 358 ELAG LLS+LFED FKR N ++K+ D +LSK +RA +FD ++ + IT L A+ Sbjct: 344 ELAGQLLSILFEDTFKRFNFELKKSIDKILSKRSRAQEFDALTFLNLQANMITSTLARAI 403 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 S+GNW ++RFRMER GVT VLSR S+I+A+GMMT++ S FEKTRKVSGPR Sbjct: 404 STGNWNLKRFRMERSGVTHVLSRHSYISALGMMTKINSHFEKTRKVSGPR 453 [153][TOP] >UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RNH0_PLAYO Length = 1323 Score = 162 bits (409), Expect = 2e-38 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK Sbjct: 443 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 502 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301 RLELAG L+SLLFEDL+KR +K+Q D LSK +++ Sbjct: 503 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 562 Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ Sbjct: 563 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 622 Query: 476 FEKTRKVSGPR 508 FEK RKVSGPR Sbjct: 623 FEKGRKVSGPR 633 [154][TOP] >UniRef100_Q4YMS1 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4YMS1_PLABE Length = 607 Score = 162 bits (409), Expect = 2e-38 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK Sbjct: 329 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 388 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301 RLELAG L+SLLFEDL+KR +K+Q D LSK +++ Sbjct: 389 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKLKNNSSIGGNNNFSDNS 448 Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ Sbjct: 449 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 508 Query: 476 FEKTRKVSGPR 508 FEK RKVSGPR Sbjct: 509 FEKGRKVSGPR 519 [155][TOP] >UniRef100_Q4XDD3 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4XDD3_PLACH Length = 432 Score = 162 bits (409), Expect = 2e-38 Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 22/191 (11%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVP-RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNK 178 K ++E D L+ V+L H+ +Y F K + +M+RR+L + + +DD+DYYGNK Sbjct: 178 KDIIEEGLDFLSRVLLSHIQQKSKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNK 237 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQF------------------- 301 RLELAG L+SLLFEDL+KR +K+Q D LSK +++ Sbjct: 238 RLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSSYNSKMKNNSSVGGNNNFSDNS 297 Query: 302 --DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 475 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQ Sbjct: 298 YPDVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQ 357 Query: 476 FEKTRKVSGPR 508 FEK RKVSGPR Sbjct: 358 FEKGRKVSGPR 368 [156][TOP] >UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPZ8_CRYPV Length = 1287 Score = 159 bits (402), Expect = 1e-37 Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 15/183 (8%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 + +D+ + L V+L H+ K ++ +M +R+L A D + +DD+DYYGNKR+ Sbjct: 417 TSIDDVLETLNRVLLSHIGTIYTDLHPKALFLCLMAKRVLDASEDNSLLDDKDYYGNKRI 476 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVL---------SKA------NRATQFDVAKAI 319 ELAG L+S+LFEDLFKR + K+Q D L SKA + +T D + + Sbjct: 477 ELAGQLISILFEDLFKRFSVLTKKQIDQTLIRYFQTRDASKAGTGRDDSNSTYPDCFRNL 536 Query: 320 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 499 TD IT G+++ALS+GNW I+RFRMER G+TQVL+R S+IA++G+MTR+ SQFEK RKVS Sbjct: 537 PTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLTRFSYIASLGIMTRVDSQFEKARKVS 596 Query: 500 GPR 508 GPR Sbjct: 597 GPR 599 [157][TOP] >UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=A0D7M6_PARTE Length = 1131 Score = 158 bits (399), Expect = 2e-37 Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 3/168 (1%) Frame = +2 Query: 14 DEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELA 193 D+AR+ LA V L HV +Y F K Y+ MVRR++ A+ D +DD+DYYGNKR+ A Sbjct: 289 DQAREKLAQVFLAHVNCKKYDFYPKAIYLGQMVRRLILAMEDKRFVDDKDYYGNKRMRCA 348 Query: 194 GGLLSLLFEDLFKRLNSDIKRQADAVLSKAN-RATQFDVAKAIRT--DTITYGLESALSS 364 G LL LLFEDLFK LNS I L KAN + T DV ++ IT GL A+ + Sbjct: 349 GNLLELLFEDLFKGLNSTISSILKKELGKANCKFTPKDVTMKMKEFGVDITKGLNRAIKT 408 Query: 365 GNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 G W I+RF M+R+GVTQ+L+R+S+ +A+GM+T+M SQ +KT KVSGPR Sbjct: 409 GKWTIQRFHMDRQGVTQLLARISYTSALGMLTKMRSQVQKTLKVSGPR 456 [158][TOP] >UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AM79_BABBO Length = 1171 Score = 156 bits (394), Expect = 9e-37 Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 11/177 (6%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 +++ D+L V+L H+P+ + F+ KI + +M RR+L +DD+D+YGNKRLE Sbjct: 343 IEDTHDILTRVLLSHIPMRNCRDFSGKIKSLCLMARRVLSVASGKEPMDDKDHYGNKRLE 402 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSK----------ANRATQFDVAKAIRTDTIT 337 LAG L+S+LFEDLFK +K+Q DA L++ +A D ++ TD IT Sbjct: 403 LAGQLISILFEDLFKAFLGQLKKQIDATLTRHYEIVSNCHGGEQAKYPDCLVSLPTDIIT 462 Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 G+++ +S+GNW I+RFR+ER GV+Q+LSRLS+I+ +GMMT+ SQFEK RKVS PR Sbjct: 463 RGMQATISTGNWNIKRFRIERSGVSQILSRLSYISCLGMMTKTNSQFEKGRKVSKPR 519 [159][TOP] >UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V6K7_NOSCE Length = 1091 Score = 156 bits (394), Expect = 9e-37 Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 2/170 (1%) Frame = +2 Query: 5 SKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRL 184 +K++E R+V+ +L +V K + +MVRR+++ + +D+D+ GNKR Sbjct: 284 NKLEEVRNVIVEKILPNVKFDGVDLRNKGIMICLMVRRLIFTQKNIITEEDKDFIGNKRF 343 Query: 185 ELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYGLESAL 358 ELAG LLS+LFED FK+ N ++KR D +L+K RA +FD ++T+ IT ++ A+ Sbjct: 344 ELAGQLLSILFEDSFKKFNWELKRSIDKILTKRLRAQEFDALTFFNLQTNIITTSMQRAI 403 Query: 359 SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 SSGNW +RRFRM+R GVT VL R S+I+A+GMMT++ S FEKTRKVSGPR Sbjct: 404 SSGNWNLRRFRMDRSGVTHVLIRHSYISAVGMMTKVNSHFEKTRKVSGPR 453 [160][TOP] >UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3 RepID=A2E3T5_TRIVA Length = 1142 Score = 155 bits (392), Expect = 1e-36 Identities = 75/164 (45%), Positives = 114/164 (69%) Frame = +2 Query: 17 EARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAG 196 + R+ L +VL H+P F +K +V M R +L + +DP ID RD++GNKRLELAG Sbjct: 311 KGREFLRSMVLPHIPSTLTDFRRKSVFVGFMTRWLLLSAIDPRMIDGRDFFGNKRLELAG 370 Query: 197 GLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWI 376 LL LLFEDLFK N+ +++ ++K+ ++A+A+ ++TIT+GL+ A+SSGNW Sbjct: 371 ELLELLFEDLFKTFNASMQKTVSRTINKSKGIDPSNIAQAMHSETITHGLKYAISSGNWN 430 Query: 377 IRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 I RF+M R GV+Q+L R+S++ + M+TR++S FEKT+KV+G R Sbjct: 431 ITRFKMMRAGVSQLLGRMSYLQFVSMVTRISSHFEKTQKVAGAR 474 [161][TOP] >UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K7V0_9ALVE Length = 1159 Score = 155 bits (391), Expect = 2e-36 Identities = 84/159 (52%), Positives = 112/159 (70%), Gaps = 15/159 (9%) Frame = +2 Query: 77 FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256 F+ K ++ +M+RR L A D +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+ Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386 Query: 257 QADAVLSK---------ANRATQF------DVAKAIRTDTITYGLESALSSGNWIIRRFR 391 D L+K A R+T DV + I ++ IT G+ A+SSGNW I+RFR Sbjct: 387 SVDMRLTKFFQQTSSARAGRSTVGLDSGYPDVLRDIDSERITRGMNRAISSGNWNIKRFR 446 Query: 392 MERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 ++R GV+QVLSR SFIAA+G MTR+ SQFEK+RK++GPR Sbjct: 447 IDRSGVSQVLSRFSFIAALGAMTRVKSQFEKSRKLAGPR 485 [162][TOP] >UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4MYU5_THEPA Length = 1244 Score = 154 bits (390), Expect = 2e-36 Identities = 78/177 (44%), Positives = 125/177 (70%), Gaps = 11/177 (6%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 +++ D+L+ V+L H+P+ + F+ KI +++M R+L V + +DD+D+YGNKRLE Sbjct: 380 LEDTHDILSRVLLSHIPMKDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 439 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337 LAG ++S+LFED +K+ S++K+ +++L +K + D+ + TD IT Sbjct: 440 LAGQMISILFEDFYKKFLSNMKKSIESILVKYLEANPNPAKGENSNFPDIFGLMPTDIIT 499 Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFEK RKVSGPR Sbjct: 500 NGMQNAIATGNWNIKRFRMEKSGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 556 [163][TOP] >UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AC47_9CRYT Length = 1219 Score = 154 bits (389), Expect = 3e-36 Identities = 85/182 (46%), Positives = 118/182 (64%), Gaps = 16/182 (8%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLEL 190 +++ + L VVL HV K + +M RR++ A + + +DD+DYYGNKR+EL Sbjct: 360 IEDVLETLNRVVLSHVGTIYGDLRPKALILCLMARRVIDASENQSLLDDKDYYGNKRIEL 419 Query: 191 AGGLLSLLFEDLFKRLNSDIKRQADAVLSK-------ANRATQF---------DVAKAIR 322 AG L+S+LFEDLFKR S K+Q D L + +++ T D + + Sbjct: 420 AGQLISILFEDLFKRFASLTKKQIDQTLVRYFQTKDNSSKVTSGKEDTNSNYPDCFRNLP 479 Query: 323 TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSG 502 TD IT G+++ALS+GNW I+RFRMER G+TQVLSR S+I+A+G+MTR+ SQFEK RKVSG Sbjct: 480 TDIITRGMQTALSTGNWSIKRFRMERSGMTQVLSRYSYISALGIMTRVDSQFEKARKVSG 539 Query: 503 PR 508 PR Sbjct: 540 PR 541 [164][TOP] >UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UB41_THEAN Length = 1244 Score = 152 bits (385), Expect = 9e-36 Identities = 76/177 (42%), Positives = 125/177 (70%), Gaps = 11/177 (6%) Frame = +2 Query: 11 VDEARDVLAHVVLCHVPVPRYQ-FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 +++ D+L+ V+L H+P+ + F+ KI +++M R+L V + +DD+D+YGNKRLE Sbjct: 379 IEDTHDILSRVLLSHIPMRDCRDFSGKIKTLSLMAHRVLNVVNNVEPLDDKDHYGNKRLE 438 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVL----------SKANRATQFDVAKAIRTDTIT 337 LAG ++S+LFED +K+ +++K+ ++++ +K + D+ + TD IT Sbjct: 439 LAGQMISILFEDFYKKFLNNMKKSIESIIVKYLESNPNPTKGENSNFPDIFGLMPTDIIT 498 Query: 338 YGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFEK RKVSGPR Sbjct: 499 NGMQNAIATGNWNIKRFRMEKTGVSQVLSRLSYISSIGMMTKTDSQFEKGRKVSGPR 555 [165][TOP] >UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI25_ENTBH Length = 1107 Score = 147 bits (372), Expect = 3e-34 Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 6/175 (3%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQF----AQKIAYVAVMVRRMLYAVLDPACIDDRDYY 169 K K D+ +++ +L P + K + +M+R+++ A + DD+DY Sbjct: 278 KLKSDDNKEIKVKSILAEKLFPNIKIDDDLKNKGICLCLMIRKLILAKQNLLKPDDKDYL 337 Query: 170 GNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKA--IRTDTITYG 343 GNKR ELAG LLS+LFED FK+ N ++K+ D +LSK R +FD ++T +IT Sbjct: 338 GNKRFELAGQLLSILFEDTFKKFNFELKKSIDKILSKRIRTNEFDALTFFNLQTGSITTT 397 Query: 344 LESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 L A+SSGNW ++RF+MER GVT VL+R S+I A+GMMT++ S FEKTRKVSGPR Sbjct: 398 LSRAISSGNWNLKRFKMERSGVTHVLTRYSYITALGMMTKINSHFEKTRKVSGPR 452 [166][TOP] >UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAB2_9ALVE Length = 1140 Score = 138 bits (347), Expect = 2e-31 Identities = 77/150 (51%), Positives = 103/150 (68%), Gaps = 6/150 (4%) Frame = +2 Query: 77 FAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKR 256 F+ K ++ +M+RR L A D +DDRDYYGNKRLELAG L++LLFEDLFK +N++IK+ Sbjct: 327 FSGKCRFLCLMMRRALDARSDSTLLDDRDYYGNKRLELAGQLIALLFEDLFKSMNTEIKK 386 Query: 257 QADAVLSKANRATQFDVAKAIRTDTITYGLESAL------SSGNWIIRRFRMERKGVTQV 418 D L+K F + R T GL+S ++GN I+RFR++R GV+QV Sbjct: 387 SVDMRLTKF-----FQQTSSARAGRSTVGLDSGYPDVLLRATGN--IKRFRIDRSGVSQV 439 Query: 419 LSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 LSR SFIAA+G MTR+ SQFEK+RK++GPR Sbjct: 440 LSRFSFIAALGAMTRVKSQFEKSRKLAGPR 469 [167][TOP] >UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP Length = 1100 Score = 124 bits (312), Expect = 3e-27 Identities = 59/142 (41%), Positives = 97/142 (68%) Frame = +2 Query: 83 QKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQA 262 +K ++++MV+++ + P D++DYYGNKRL LAG L+S+LFED F++ + + Sbjct: 320 EKGIFLSLMVKKIFSNLNQPMITDNKDYYGNKRLGLAGNLVSILFEDFFRKTLKEGYKYY 379 Query: 263 DAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIA 442 +K + ++ +R D IT GLE + S+GNWI+++ ++E+ GVTQ LSRLSFI+ Sbjct: 380 KLNSTKLKKNQHLELISFLRQDIITNGLEYSFSTGNWIVKKLKIEKNGVTQTLSRLSFIS 439 Query: 443 AMGMMTRMTSQFEKTRKVSGPR 508 ++ ++T++TSQ EK RK+ GPR Sbjct: 440 SISIVTKITSQNEKIRKIRGPR 461 [168][TOP] >UniRef100_Q98S96 DNA-directed RNA polymerase n=1 Tax=Guillardia theta RepID=Q98S96_GUITH Length = 1049 Score = 121 bits (304), Expect = 2e-26 Identities = 61/160 (38%), Positives = 103/160 (64%) Frame = +2 Query: 29 VLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLS 208 +L+H+++ PV Q +K ++ +M+R++LYA+ P +D +DYYGNKRLEL+G L+ Sbjct: 286 ILSHIIVNKNPVS--QNLEKGIFMTMMIRKLLYALQIPDLLDSKDYYGNKRLELSGDLVE 343 Query: 209 LLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWIIRRF 388 +L EDL + + K+ + + N I++D I+YG+E+A +GNW I ++ Sbjct: 344 ILLEDLLHKSWIESKKFIEKKKIEVNETIYHHF---IKSDFISYGIENAFITGNWKINKY 400 Query: 389 RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +++ G+TQ+LSRLSF+++ M+ + +S FEKTRK PR Sbjct: 401 GIDKNGITQILSRLSFMSSFSMLLKTSSNFEKTRKSISPR 440 [169][TOP] >UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LZ34_GIALA Length = 1239 Score = 121 bits (304), Expect = 2e-26 Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 4/155 (2%) Frame = +2 Query: 56 VPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKR 235 V + R+ + K Y+A MVRR + D +D+ GNK++E AG LL L+F+D FK Sbjct: 408 VNMARFNWLPKAVYLATMVRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKT 467 Query: 236 LNSDIKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK 403 L + + R+ D +L S NR T +DV + IT SA+S+GNW I R ++R Sbjct: 468 LLAHMARKVDVILRSDKNRGTDLTNYDVVSLVDPSIITRAFNSAISTGNWKIERIGVDRV 527 Query: 404 GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 GV+QVLSRLS+I+ +G +TR++S F+K K SGPR Sbjct: 528 GVSQVLSRLSYISTLGQVTRLSSTFDKAMKSSGPR 562 [170][TOP] >UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B2N4_GIALA Length = 1238 Score = 120 bits (301), Expect = 5e-26 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 4/151 (2%) Frame = +2 Query: 68 RYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSD 247 R+ + K Y+A M+RR + D +D+ GNK++E AG LL L+F+D FK L + Sbjct: 411 RFNWLPKAVYLATMIRRAILFDFGVIKGDSKDFVGNKKIETAGDLLELIFDDAFKTLLAH 470 Query: 248 IKRQADAVL-SKANRATQ---FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQ 415 + R+ D+VL S NR T +D+ + IT SA+S+GNW I + ++R GV+Q Sbjct: 471 MVRKVDSVLRSDRNRGTDLTNYDIVSLVDPSIITRAFNSAISTGNWKIEKIGVDRVGVSQ 530 Query: 416 VLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +LSRLS+I+A+G +TR++S F+K K SGPR Sbjct: 531 ILSRLSYISALGQVTRLSSTFDKAMKSSGPR 561 [171][TOP] >UniRef100_A6RTM3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RTM3_BOTFB Length = 490 Score = 115 bits (289), Expect = 1e-24 Identities = 55/101 (54%), Positives = 73/101 (72%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 +S V++A + LA++++ HVPV F K Y+ MVRR+L A+++P +DDRDY GNKR Sbjct: 374 RSYVNDALEALANIIITHVPVVGLDFRPKALYICFMVRRVLMAMVNPTLVDDRDYVGNKR 433 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFD 304 LELAG LLSLLFEDLFK+ N+D+K D VL K NR +FD Sbjct: 434 LELAGQLLSLLFEDLFKKFNTDLKMNIDKVLKKPNRGMEFD 474 [172][TOP] >UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis RepID=Q27670_9ANNE Length = 859 Score = 111 bits (278), Expect = 2e-23 Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A+++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 140 EKRIKYAKEILQKEMLPHVGISDFCETRKAYFLGYMVHRLLLAALGRREVDDRDHYGNKR 199 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L+ +I+ A + +R F++ AI+T TIT GL+ +L+ Sbjct: 200 LDLAGPLLAYLFRGLFRNLSKEIRLYAQKFI---DRGKDFNLELAIKTRTITDGLKYSLA 256 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306 [173][TOP] >UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926137 Length = 1426 Score = 110 bits (276), Expect = 4e-23 Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 338 EKRIKYAREILQKEMLPHVGTSDFCETKKAYFLGYMVHRILLAALGRRELDDRDHYGNKR 397 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LFK L +++ A + K F + AI+T TIT GL +L+ Sbjct: 398 LDLAGPLLAFLFRGLFKNLMKEVRLYAQKFIDKGK---DFKIELAIKTKTITDGLRYSLA 454 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 455 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 504 [174][TOP] >UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina RepID=Q27446_ARTSA Length = 862 Score = 110 bits (275), Expect = 5e-23 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ AR++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 142 RIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 201 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG L+SLLF LFK L +++ A + +R F++ AI+ IT GL+ +L++G Sbjct: 202 LAGPLMSLLFRGLFKTLTKEVRMYAQKFI---DRGKDFNIELAIKPKFITDGLKYSLATG 258 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 259 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 306 [175][TOP] >UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D5712C Length = 1175 Score = 110 bits (274), Expect = 7e-23 Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L+ Sbjct: 393 LDLAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [176][TOP] >UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4Q1D7_SCHMA Length = 1304 Score = 110 bits (274), Expect = 7e-23 Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A+++L L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 459 EKRIKYAKEILQKETLPHVGVSDFCETRKAYFLGYMVHRLLLAALKRRDVDDRDHYGNKR 518 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +I+ A + K F++ AIR+ IT GL+ +L+ Sbjct: 519 LDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGK---DFNLELAIRSQIITDGLKYSLA 575 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 576 TGNWGDQKKANQARPGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 625 [177][TOP] >UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio RepID=UPI0001B09250 Length = 1174 Score = 109 bits (273), Expect = 9e-23 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [178][TOP] >UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma floridae RepID=UPI0001865901 Length = 1176 Score = 109 bits (273), Expect = 9e-23 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ AR++L +L HV + Y +K ++ +V R+L A L +DDRD+YGNKRL+ Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL+ +L++G Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501 [179][TOP] >UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio RepID=Q6DRH1_DANRE Length = 562 Score = 109 bits (273), Expect = 9e-23 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [180][TOP] >UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA Length = 1174 Score = 109 bits (273), Expect = 9e-23 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL VL HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 395 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [181][TOP] >UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3Y5U9_BRAFL Length = 1104 Score = 109 bits (273), Expect = 9e-23 Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ AR++L +L HV + Y +K ++ +V R+L A L +DDRD+YGNKRL+ Sbjct: 337 RIKYAREILQKEMLPHVGISDYCETKKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLD 396 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL+ +L++G Sbjct: 397 LAGPLLAYLFRGLFKNLTKEVRIYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLATG 453 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 454 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501 [182][TOP] >UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide n=1 Tax=Acyrthosiphon pisum RepID=UPI00017937B7 Length = 1101 Score = 108 bits (271), Expect = 2e-22 Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLDLAIKTKLITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [183][TOP] >UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7QAK7_ANOGA Length = 1175 Score = 108 bits (271), Expect = 2e-22 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [184][TOP] >UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas RepID=Q27548_CRAGI Length = 859 Score = 108 bits (271), Expect = 2e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV V + +K ++ MV R+L A + +DDRD+YGNKR Sbjct: 140 EKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAAIGRREVDDRDHYGNKR 199 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +++ A + +R F++ AI+T IT GL+ +L+ Sbjct: 200 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 256 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 257 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPR 306 [185][TOP] >UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia vitripennis RepID=UPI00015B44D8 Length = 1175 Score = 108 bits (270), Expect = 2e-22 Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ AR++L L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAREILQKETLPHVGVSDFCETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLARPR 499 [186][TOP] >UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B4CC9 Length = 1147 Score = 108 bits (270), Expect = 2e-22 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472 [187][TOP] >UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016DFC9D Length = 1045 Score = 108 bits (270), Expect = 2e-22 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 144 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 203 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 204 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 260 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 261 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 308 [188][TOP] >UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4T1Y4_TETNG Length = 1217 Score = 108 bits (270), Expect = 2e-22 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 308 RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 367 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF +FK L +I+ A + +R F++ AI+T I+ GL+ +L++G Sbjct: 368 LAGPLLAFLFRGMFKNLLKEIRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLATG 424 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW +++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 425 NWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 472 [189][TOP] >UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0WKE9_CULQU Length = 1176 Score = 108 bits (270), Expect = 2e-22 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLLKEVRMYAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [190][TOP] >UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis confervae-glomeratae RepID=A1YID9_9FUNG Length = 886 Score = 108 bits (270), Expect = 2e-22 Identities = 56/168 (33%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A D+L +L HV + + +K + M+ R+L A L+ +DDRD++G KRL+ Sbjct: 144 RIRYATDILTKEMLPHVSMESHHQTRKAFFFGYMIHRLLLAALERRPLDDRDHFGRKRLD 203 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LLS LF LF++L +D+ R ++ +F++A A+++ TIT GL+ +L++G Sbjct: 204 LAGPLLSSLFRTLFRKLTTDVSRYTKKIVETGG---EFNLAMALKSATITKGLQYSLATG 260 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++F + GV+QVL+R ++ + + + R+ + + K++ PR Sbjct: 261 NWGDQKKFMSAKAGVSQVLNRYTYASTLSHLRRLNTPIGRDGKLAKPR 308 [191][TOP] >UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D6F3 Length = 1175 Score = 108 bits (269), Expect = 3e-22 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMFAQKFI---DRGKDFNLELAIKTKIITDGLRYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [192][TOP] >UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis RepID=B7QNH8_IXOSC Length = 1142 Score = 107 bits (268), Expect = 4e-22 Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ +R++L +L HV V + +K Y+ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYSREILQKEMLPHVGVSDFCETKKAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG L++ LF LF+ L +++ A + +R F++ AI+T IT GL +L++G Sbjct: 395 LAGPLMAFLFRGLFRNLTKEVRMYAQKFI---DRGKDFNLELAIKTRIITDGLRYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL++ + + + R+ S + K++ PR Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRVNSPIGRDGKLAKPR 499 [193][TOP] >UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium discoideum RepID=RPB2_DICDI Length = 1170 Score = 107 bits (268), Expect = 4e-22 Identities = 58/169 (34%), Positives = 97/169 (57%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR+VL +L HV V + +K Y + R+L A L+ +DDRD++ NKR Sbjct: 331 EQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYITHRLLLASLERRPLDDRDHFANKR 390 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL LF LFK+L D++ + K +F + A+++ TIT GL+ +L+ Sbjct: 391 LDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDK---EFIASSAVKSKTITSGLKYSLA 447 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW + + GV QVL+RL+F + + + R+ + + K++ PR Sbjct: 448 TGNWGSSKSGGTKSGVAQVLNRLTFASTLSHLRRLNTPIGREGKLAKPR 496 [194][TOP] >UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis RepID=UPI000180B7B7 Length = 1173 Score = 107 bits (267), Expect = 5e-22 Identities = 60/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV + + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMVHRLLSAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +++ A + +R F++ AI+T IT GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGLFRNLMKEVRLYAQKFI---DRGKDFNLELAIKTRIITDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL++ + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTYASTLSHLRRLNSPIGRDGKLAKPR 499 [195][TOP] >UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans RepID=B4R0H5_DROSI Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [196][TOP] >UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4PTC0_DROYA Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [197][TOP] >UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4N9I3_DROWI Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [198][TOP] >UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4M040_DROVI Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [199][TOP] >UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KDW5_DROMO Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [200][TOP] >UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4K015_DROGR Length = 1175 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 335 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 394 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 395 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 451 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 452 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 499 [201][TOP] >UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup RepID=Q298X6_DROPS Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [202][TOP] >UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3P0M0_DROER Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [203][TOP] >UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3LYR3_DROAN Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [204][TOP] >UniRef100_A1YIC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Smittium culisetae RepID=A1YIC7_SMICU Length = 899 Score = 107 bits (267), Expect = 5e-22 Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L L HV + +K ++ MV R+L VL+ DDRD+YG KR Sbjct: 125 EKRIKYAREILQKEFLPHVGTQPHNETRKTYFLGYMVHRLLQCVLERRDQDDRDHYGRKR 184 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL++LF +LFK++ D+ R + +F+++ A++++TIT GL+ +L+ Sbjct: 185 LDLAGPLLAMLFRNLFKKMTRDMTRYLQKCIESRR---EFNLSMALKSNTITAGLKYSLA 241 Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ M+ R GV QVL+R +F + + + R + + K++ PR Sbjct: 242 TGNWGDQKKAMQSRTGVAQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 291 [205][TOP] >UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster subgroup RepID=RPB2_DROME Length = 1176 Score = 107 bits (267), Expect = 5e-22 Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 336 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLD 395 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LFK L +++ + +R F++ AI+T+ IT GL +L++G Sbjct: 396 LAGPLLAFLFRGLFKNLMKEVRMYTQKFI---DRGKDFNLELAIKTNIITDGLRYSLATG 452 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 453 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR 500 [206][TOP] >UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3 Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [207][TOP] >UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2 (RNA polymerase II subunit B2) (DNA-directed RNA polymerase II subunit B) (RNA polymerase II subunit 2) (DNA-directed RNA polymerase II 140 kDa polypeptide) n=1 Tax=Equus caballus RepID=UPI0001795E58 Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLQLAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [208][TOP] >UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7 Length = 951 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [209][TOP] >UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1 Tax=Monodelphis domestica RepID=UPI0000F2D75F Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [210][TOP] >UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000E20419 Length = 1099 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424 [211][TOP] >UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini RepID=RPB2_HUMAN Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [212][TOP] >UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D Length = 1099 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424 [213][TOP] >UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C Length = 1173 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [214][TOP] >UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B Length = 1179 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [215][TOP] >UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A Length = 1175 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [216][TOP] >UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59 Length = 1180 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [217][TOP] >UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58 Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500 [218][TOP] >UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57 Length = 1180 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [219][TOP] >UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56 Length = 1166 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 328 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 387 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 388 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 444 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 445 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 494 [220][TOP] >UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55 Length = 1182 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 329 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 388 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 389 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 445 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 446 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 495 [221][TOP] >UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54 Length = 1173 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [222][TOP] >UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52 Length = 1162 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [223][TOP] >UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RPB2) isoform 5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51 Length = 932 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [224][TOP] >UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA polymerase II subunit B2) (DNA-directed RNA polymerase II subunit B) (RNA polymerase II subunit 2) (DNA-directed RNA polymerase II 140 kDa polypeptide). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A01AA Length = 927 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [225][TOP] >UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA polymerase II subunit B2) (DNA-directed RNA polymerase II subunit B) (RNA polymerase II subunit 2) (DNA-directed RNA polymerase II 140 kDa polypeptide). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9 Length = 1176 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [226][TOP] >UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus RepID=UPI0000F3357E Length = 1177 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 393 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 394 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 450 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 451 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 500 [227][TOP] >UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1 Tax=Gallus gallus RepID=UPI00003AD7E4 Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [228][TOP] >UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA Length = 949 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [229][TOP] >UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus RepID=Q5ZMN9_CHICK Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [230][TOP] >UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [231][TOP] >UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN Length = 1083 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 242 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 301 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 302 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 358 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 359 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 408 [232][TOP] >UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN Length = 1167 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 326 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 385 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 386 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 442 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 443 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 492 [233][TOP] >UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN Length = 1099 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 258 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 317 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 318 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 374 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 375 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 424 [234][TOP] >UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens RepID=A8MW88_HUMAN Length = 1173 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 332 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 391 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 392 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 448 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 449 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 498 [235][TOP] >UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus RepID=RPB2_MOUSE Length = 1174 Score = 106 bits (265), Expect = 8e-22 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNKR Sbjct: 333 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKR 392 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L+ Sbjct: 393 LDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSLA 449 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 450 TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 499 [236][TOP] >UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7SHD8_NEMVE Length = 1182 Score = 106 bits (264), Expect = 1e-21 Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A+++L +L HV V + +K ++ MV R+L A L +DDRD+YGNKRL+ Sbjct: 339 RIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD 398 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LF+ L +++ A + +R F++ A++ IT GL +L++G Sbjct: 399 LAGPLLAFLFRGLFRNLMKEVRMYAQKFI---DRGKDFNIELALKPKVITDGLRYSLATG 455 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 456 NWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPR 503 [237][TOP] >UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis elegans RepID=RPB2_CAEEL Length = 1193 Score = 105 bits (262), Expect = 2e-21 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR Sbjct: 339 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 398 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+ Sbjct: 399 LDLAGPLLAFLFRSLFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLTYSLA 455 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL++ A + + R S + K++ PR Sbjct: 456 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 505 [238][TOP] >UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum RepID=A1YID1_9FUNG Length = 883 Score = 105 bits (261), Expect = 2e-21 Identities = 58/168 (34%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A ++L L HV + +K + MV R+L A L+ +DDRD+YG KR++ Sbjct: 140 RIKYATEILQKEFLPHVATEAHTETKKAYFFGYMVHRLLLAALERRDLDDRDHYGKKRMD 199 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL++LF LF++L D+ R + +NR +F++ A++++TIT GL+ +L++G Sbjct: 200 LAGPLLAMLFRMLFRKLTKDVGRYLQKCID-SNR--EFNLTLAVKSNTITNGLKYSLATG 256 Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ M+ R GV+QVL+R +F + + + R + + K++ PR Sbjct: 257 NWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 304 [239][TOP] >UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000221AC5 Length = 1194 Score = 104 bits (260), Expect = 3e-21 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR Sbjct: 340 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 399 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+ Sbjct: 400 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 456 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL++ A + + R S + K++ PR Sbjct: 457 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 506 [240][TOP] >UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8XS50_CAEBR Length = 1215 Score = 104 bits (260), Expect = 3e-21 Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L +L HV V + +K ++ MV R+L A L +DDRD+ GNKR Sbjct: 361 EQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKR 420 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L+LAG LL+ LF LF+ L +++ A + N+ F + ++T TIT GL +L+ Sbjct: 421 LDLAGPLLAFLFRALFRNLLKEMRMTAQKYI---NKNDDFALDVCVKTSTITRGLAYSLA 477 Query: 362 SGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW ++ R GV+QVL+RL++ A + + R S + K++ PR Sbjct: 478 TGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSPIGREGKLAKPR 527 [241][TOP] >UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1ML14_9CHLO Length = 1172 Score = 103 bits (258), Expect = 5e-21 Identities = 56/169 (33%), Positives = 97/169 (57%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A+D+L +L HV V +K Y+ +V R+L L DDRD++GNKR Sbjct: 330 EKRIKYAQDILQKELLPHVGVDEECETRKAYYLGYIVHRLLLCALGRRNEDDRDHFGNKR 389 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 ++LAG L+++LF LF++L D++ + + + A++ TIT GL+ +L+ Sbjct: 390 MDLAGPLIAILFRQLFRKLTKDVRLYCQRCVDSGK---EIQLTLAVKAKTITSGLKYSLA 446 Query: 362 SGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW + + R GV+QVL+RLSF + + + R+ S + K++ PR Sbjct: 447 TGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSPIGREGKLAKPR 495 [242][TOP] >UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UUX4_MONBE Length = 1166 Score = 103 bits (258), Expect = 5e-21 Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 +V ARD+L +L H+ V K ++ MV R L A L +DDRD+YGNKRL+ Sbjct: 325 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 384 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG L++ LF LFK+L + R+ V NR +F V + + + GL +L++G Sbjct: 385 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 441 Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ E R GV+QVL+RL+F + + + R+ S ++T K++ PR Sbjct: 442 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 489 [243][TOP] >UniRef100_A1YIE5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=A1YIE5_MONBE Length = 904 Score = 103 bits (258), Expect = 5e-21 Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 +V ARD+L +L H+ V K ++ MV R L A L +DDRD+YGNKRL+ Sbjct: 148 RVRFARDILQKEMLPHIGVGPQCEQAKAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLD 207 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG L++ LF LFK+L + R+ V NR +F V + + + GL +L++G Sbjct: 208 LAGSLVAYLFRTLFKQLTKKLTRK---VTDLVNRNHKFMVITLLDVEILGSGLRYSLATG 264 Query: 368 NWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ E R GV+QVL+RL+F + + + R+ S ++T K++ PR Sbjct: 265 NWGDQKKAHEARAGVSQVLNRLTFASTLSHLRRLNSPIDRTGKIAKPR 312 [244][TOP] >UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix frontalis RepID=A1YIE4_NEOFR Length = 915 Score = 103 bits (257), Expect = 7e-21 Identities = 57/164 (34%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Frame = +2 Query: 20 ARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGG 199 A ++L +L H+ + +K + M+ R+L A L+ DDRD++G KRL+LAG Sbjct: 151 AAEILQKELLPHIGTKAHTETKKAYFFGYMIHRLLLAALERRECDDRDHFGKKRLDLAGP 210 Query: 200 LLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSGNWII 379 LL LF LF++L SD+ + + +R +F++ AIR +TIT GL+ +L++GNW Sbjct: 211 LLGSLFRMLFRKLTSDVSKSLQKCI---DRNREFNLNVAIRPNTITDGLKYSLATGNWGA 267 Query: 380 R-RFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 + +F R GV+QVL+R +F + + + R+ + + K++ PR Sbjct: 268 QSKFMQSRAGVSQVLNRYTFASTLSHLRRLNTPIGRDGKLAKPR 311 [245][TOP] >UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus RepID=A1YID6_ALLMA Length = 896 Score = 103 bits (257), Expect = 7e-21 Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A D+L +L H+ + +K ++ MV R+L A L +DDRD++G KRL+ Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF F++L D+ R + R +F++ AI ++TIT GL AL++G Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++F R GV+QVL+R +F + + + R+ + + K++ PR Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300 [246][TOP] >UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus RepID=A1YID5_ALLMA Length = 867 Score = 103 bits (257), Expect = 7e-21 Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A D+L +L H+ + +K ++ MV R+L A L +DDRD++G KRL+ Sbjct: 136 RIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKKRLD 195 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF F++L D+ R + R +F++ AI ++TIT GL AL++G Sbjct: 196 LAGPLLASLFRTFFQKLTKDVSRYFTVCI---ERGREFNLNMAINSNTITNGLRYALATG 252 Query: 368 NW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++F R GV+QVL+R +F + + + R+ + + K++ PR Sbjct: 253 NWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPR 300 [247][TOP] >UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB RepID=Q6RYG8_9BASI Length = 931 Score = 103 bits (256), Expect = 9e-21 Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Frame = +2 Query: 8 KVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLE 187 ++ A ++L +L H+ + Q +K + MV R+L A LD +DDRD++G KRL+ Sbjct: 145 RLQYAEEILQKEMLPHISMSEGQQGKKAYFFGYMVHRLLLAALDRRDLDDRDHFGKKRLD 204 Query: 188 LAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALSSG 367 LAG LL+ LF LF++L D+ R + F++ A++++TIT GL+ +L++G Sbjct: 205 LAGPLLASLFRILFRKLTKDVYRHLQKCVEMQK---PFNLNAAVKSNTITNGLKYSLATG 261 Query: 368 NWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 NW ++ M+ K GV+QVL+R +F + + + R + + K++ PR Sbjct: 262 NWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPR 309 [248][TOP] >UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon cuniculi RepID=RPB2_ENCCU Length = 1141 Score = 103 bits (256), Expect = 9e-21 Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ A+D+LA VL H+ + +K ++ +V+R+L L DDRD+YG KR Sbjct: 305 EKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKR 364 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 ++L+G LL+ LF LFK+L D R + +F++A ++ IT G AL+ Sbjct: 365 MDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGR---EFNIALGLKASIITQGFRYALA 421 Query: 362 SGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW + M+ R GV QVL+R +F++ + + R+ + EK K++ PR Sbjct: 422 TGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPR 471 [249][TOP] >UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus RepID=Q27826_EUPOC Length = 1194 Score = 102 bits (255), Expect = 1e-20 Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 1/170 (0%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKR 181 + ++ AR++L L HV +QK ++ M R+L A L DDRD+YG KR Sbjct: 359 EERIRHAREILKRHFLPHVSTKDSCESQKSYFIGYMCHRLLNAHLGRIKEDDRDHYGKKR 418 Query: 182 LELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESALS 361 L++AG LL +LF +LF+R +K + ++A++ ++ KA + D I+ GL+ AL+ Sbjct: 419 LDMAGSLLGMLFRNLFRRF---VKEAGRYLKAQADKGDSLNITKAFKKDIISDGLKYALA 475 Query: 362 SGNWIIRRF-RMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 +GNW + + GV+QVL+RL+F + + + R+ + +K+ K++ PR Sbjct: 476 TGNWGTNAAGEVSKTGVSQVLNRLTFASTLSHLRRLNTPLQKSGKLTKPR 525 [250][TOP] >UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1 Tax=Gallus gallus RepID=UPI0000ECC4A8 Length = 1176 Score = 102 bits (253), Expect = 2e-20 Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 2/171 (1%) Frame = +2 Query: 2 KSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAV-MVRRMLYAVLDPACIDDRDYYGNK 178 + ++ A++VL +L HV V + +K ++ MV R+L A L +DDRD+YGNK Sbjct: 334 EKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYYMVHRLLLAALGRRELDDRDHYGNK 393 Query: 179 RLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAIRTDTITYGLESAL 358 RL+LAG LL+ LF +FK L +++ A + +R F++ AI+T I+ GL+ +L Sbjct: 394 RLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFI---DRGKDFNLELAIKTRIISDGLKYSL 450 Query: 359 SSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPR 508 ++GNW ++ R GV+QVL+RL+F + + + R+ S + K++ PR Sbjct: 451 ATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR 501