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[1][TOP]
>UniRef100_A8IZS5 Glycine-rich RNA-binding protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IZS5_CHLRE
Length = 165
Score = 103 bits (258), Expect(2) = 4e-44
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
++ +ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY
Sbjct: 57 KSACSECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 106
Score = 98.2 bits (243), Expect(2) = 4e-44
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSAC 144
DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSAC
Sbjct: 13 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSAC 60
[2][TOP]
>UniRef100_B1ZWV3 RNP-1 like RNA-binding protein n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZWV3_OPITP
Length = 117
Score = 55.8 bits (133), Expect(2) = 2e-14
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGG-RGGGRGYGGGGRGRGG 277
+A A + +GT+ GR + VNEA P ERP GG GGGRG+GGGGRG G
Sbjct: 59 KAAAEKLNGTDLGGRQLTVNEARPKEERPSGGFGGGGRGFGGGGRGGFG 107
Score = 46.2 bits (108), Expect(2) = 2e-14
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSA 141
T ++L + F +FG+V D +VA D+ TGR RGF FVT+ A AK+A
Sbjct: 15 TTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKAA 61
[3][TOP]
>UniRef100_C1ZIK1 RRM domain-containing RNA-binding protein n=1 Tax=Planctomyces
limnophilus DSM 3776 RepID=C1ZIK1_PLALI
Length = 146
Score = 50.8 bits (120), Expect(2) = 4e-14
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G EF GRT+ VNEA P ER GG GG G GGGG G GG
Sbjct: 63 NGAEFQGRTLTVNEARPREERGGGGGGGYGGGGGGGYGGGG 103
Score = 50.4 bits (119), Expect(2) = 4e-14
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKS 138
T ADDL FS+ G V A V +DRETGRSRGFGFV + A ++
Sbjct: 14 TTADDLREAFSEHGTVTRAQVVSDRETGRSRGFGFVEMSDGAERA 58
[4][TOP]
>UniRef100_Q05XZ1 RNA-binding protein RbpD n=1 Tax=Synechococcus sp. RS9916
RepID=Q05XZ1_9SYNE
Length = 107
Score = 50.8 bits (120), Expect(2) = 2e-13
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+ E+MGR IRVN+ATP ER GG GG GYGGGG G GG
Sbjct: 61 DLQNVEWMGRMIRVNKATP-RERTGGGGGGRGGYGGGGYGGGG 102
Score = 48.1 bits (113), Expect(2) = 2e-13
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
+DL +LFS++G V+ A + DRETGR RGFGFV + ++A
Sbjct: 15 EDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMSSDA 53
[5][TOP]
>UniRef100_UPI00016C4C95 RNA-binding protein n=1 Tax=Gemmata obscuriglobus UQM 2246
RepID=UPI00016C4C95
Length = 129
Score = 51.6 bits (122), Expect(2) = 2e-13
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G + GRT+ VNEA P ERP G GGG G GGGG G GG
Sbjct: 63 NGAQLSGRTLTVNEAKPREERPRSGGGGGYGGGGGGYGGGG 103
Score = 47.0 bits (110), Expect(2) = 2e-13
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKS 138
T +DDL FS++G V A + DRETGRSRGF FV + A ++
Sbjct: 14 TTSDDLIQAFSQYGTVLGAQIVADRETGRSRGFAFVEMHDGAEEA 58
[6][TOP]
>UniRef100_A4CVH5 RNA-binding protein RbpD n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CVH5_SYNPV
Length = 115
Score = 52.0 bits (123), Expect(2) = 3e-13
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGD 280
+ E+MGR IRVN+ATP GG GGGRG GGG GRGG+
Sbjct: 61 DLQNVEWMGRMIRVNKATPRERTGGGGGGGGRGGYGGGGGRGGE 104
Score = 46.6 bits (109), Expect(2) = 3e-13
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEAN 126
+DL +LFS++G V+ A + DRETGR RGFGFV + ++
Sbjct: 15 EDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSD 52
[7][TOP]
>UniRef100_B6SIF0 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6SIF0_MAIZE
Length = 156
Score = 49.3 bits (116), Expect(2) = 3e-13
Identities = 27/45 (60%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEAT--PLGERPPGGRGGGRGYGGGGRGRGGDY 283
DG E GR +RVN A P G R GG GGG GYGGGG G GG Y
Sbjct: 99 DGKEIDGRQVRVNMANERPAGNRGGGGYGGG-GYGGGGYGGGGGY 142
Score = 48.9 bits (115), Expect(2) = 3e-13
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +1
Query: 1 DTRADD--LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSA 141
D DD L FS FG V +A V TDRETGRSRGFGFV +++AAK A
Sbjct: 45 DWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 94
[8][TOP]
>UniRef100_B6TUC4 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6TUC4_MAIZE
Length = 153
Score = 49.3 bits (116), Expect(2) = 3e-13
Identities = 27/45 (60%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEAT--PLGERPPGGRGGGRGYGGGGRGRGGDY 283
DG E GR +RVN A P G R GG GGG GYGGGG G GG Y
Sbjct: 99 DGKEIDGRQVRVNMANERPAGNRGGGGYGGG-GYGGGGYGGGGGY 142
Score = 48.9 bits (115), Expect(2) = 3e-13
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +1
Query: 1 DTRADD--LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSA 141
D DD L FS FG V +A V TDRETGRSRGFGFV +++AAK A
Sbjct: 45 DWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 94
[9][TOP]
>UniRef100_B9MIH2 RNP-1 like RNA-binding protein n=1 Tax=Diaphorobacter sp. TPSY
RepID=B9MIH2_DIAST
Length = 121
Score = 50.1 bits (118), Expect(2) = 3e-13
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPP---GGRGGGRGYGGGGRGRGGDY 283
G + GR + VNEA P+ RPP GG GGG GYGGG G GG Y
Sbjct: 66 GQNYGGRDLVVNEARPMEPRPPRSGGGFGGGGGYGGGRSGGGGGY 110
Score = 48.1 bits (113), Expect(2) = 3e-13
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL FS+FGAV+ A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDQDLEQTFSQFGAVQSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[10][TOP]
>UniRef100_UPI0001BAFCB9 RNP-1 like RNA-binding protein n=1 Tax=Haliangium ochraceum DSM
14365 RepID=UPI0001BAFCB9
Length = 125
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
DT L F +FGAV +A V TDR+TGRSRGFGFVT + +A
Sbjct: 13 DTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAA 59
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
A E DG E GR IRVNEA R GG GGG GY GGG G GG
Sbjct: 59 AAIEEMDGVELDGRNIRVNEAQE-RSRGGGGGGGGGGYRGGGGGGGG 104
[11][TOP]
>UniRef100_A2SMG9 RNA-binding region RNP-1 n=1 Tax=Methylibium petroleiphilum PM1
RepID=A2SMG9_METPP
Length = 162
Score = 49.3 bits (116), Expect(2) = 5e-13
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DDL F +FGAV A V DR+TGRS+GFGFV + ++A A
Sbjct: 15 RDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQA 59
Score = 48.1 bits (113), Expect(2) = 5e-13
Identities = 26/49 (53%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERP--------PGGRGGGRGYGGGGRGRGG 277
+G GR I VNEA P ERP GG GGG GYGGGG GR G
Sbjct: 65 NGQSLSGRAIVVNEARPREERPGGFRGPYGGGGAGGGGGYGGGGGGRSG 113
[12][TOP]
>UniRef100_UPI0001969882 hypothetical protein BACCELL_04634 n=1 Tax=Bacteroides
cellulosilyticus DSM 14838 RepID=UPI0001969882
Length = 130
Score = 51.2 bits (121), Expect(2) = 7e-13
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
+T +D L LFS++G V A++ DRETGRSRGFGFV +
Sbjct: 11 NTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEM 49
Score = 45.8 bits (107), Expect(2) = 7e-13
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 161 TEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
TEF G+ I ++ A P ERP GG GG GYGGGG RGG Y
Sbjct: 65 TEFEGKNIAISVARPRTERPAGGNRGG-GYGGGG-NRGGGY 103
[13][TOP]
>UniRef100_B3CDA8 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
DSM 17393 RepID=B3CDA8_9BACE
Length = 128
Score = 51.2 bits (121), Expect(2) = 7e-13
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
+T +D L LFS++G V A++ DRETGRSRGFGFV +
Sbjct: 11 NTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEM 49
Score = 45.8 bits (107), Expect(2) = 7e-13
Identities = 26/48 (54%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +2
Query: 161 TEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG-------RGGDY 283
TEF G+ I V+ A P ERP GG GG GYGGG RG RGG Y
Sbjct: 65 TEFEGKNIAVSVARPRTERPAGGNRGG-GYGGGNRGGGYGGGNRGGGY 111
[14][TOP]
>UniRef100_C9YCQ8 Glycine-rich RNA-binding protein GRP1A n=2 Tax=cellular organisms
RepID=C9YCQ8_9BURK
Length = 149
Score = 53.1 bits (126), Expect(2) = 9e-13
Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP------GGRGGGRGYGGGGRGRGGDY 283
+G +F GR + VNEA P+ RPP GG GGG GYGGGGR GG +
Sbjct: 71 NGQQFGGRGLVVNEARPMEPRPPRSGGFGGGAGGGGGYGGGGRSGGGGF 119
Score = 43.5 bits (101), Expect(2) = 9e-13
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
R +DL FS+ G+V A V +R+TGRS+GFGFV + ++A
Sbjct: 21 RDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDA 61
[15][TOP]
>UniRef100_A1WDA4 RNP-1 like RNA-binding protein n=1 Tax=Acidovorax sp. JS42
RepID=A1WDA4_ACISJ
Length = 149
Score = 50.4 bits (119), Expect(2) = 9e-13
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP----GGRGGGRGYGGGGRGRGGDY 283
+G GR+I VNEA P+ RPP GG GGG GYGGG G GG Y
Sbjct: 65 NGQSLGGRSIVVNEARPMEARPPRSGGGGFGGGGGYGGGRSGGGGGY 111
Score = 46.2 bits (108), Expect(2) = 9e-13
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
R DL FS+FGAV A V +R+TGRS+GFGFV + ++A
Sbjct: 15 RDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDA 55
[16][TOP]
>UniRef100_C3Y7T8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Y7T8_BRAFL
Length = 183
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-----EANAAK 135
DT ++ L + FS++G + D V TDRETGRSRGFGFVT ANA K
Sbjct: 18 DTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKK 67
Score = 44.7 bits (104), Expect(2) = 1e-12
Identities = 30/60 (50%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Frame = +2
Query: 137 APATEC-DGTEFMGRTIRVNEATPLGERP----PGGRGGGR------GYGGGGRGRGGDY 283
A A +C DGTE R IRV+ A+ E GGRGGGR GYGGGG G GG Y
Sbjct: 63 ANAKKCMDGTELDSRQIRVDYASKKSEGGGGGYRGGRGGGRYGGGGGGYGGGGYGGGGGY 122
[17][TOP]
>UniRef100_Q7F2X8 Os01g0916600 protein n=3 Tax=Oryza sativa RepID=Q7F2X8_ORYSJ
Length = 150
Score = 50.1 bits (118), Expect(2) = 1e-12
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRG 274
DG E GR+IRVN A ERPPG RGGG GYGGGG G G
Sbjct: 99 DGKELEGRSIRVNFA---NERPPGNRGGG-GYGGGGGGYG 134
Score = 46.2 bits (108), Expect(2) = 1e-12
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSA 141
+T D L F+ FG V +A V DRE+GRSRGFGFV+ + AKSA
Sbjct: 47 NTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSA 94
[18][TOP]
>UniRef100_A1VNL4 RNP-1 like RNA-binding protein n=1 Tax=Polaromonas
naphthalenivorans CJ2 RepID=A1VNL4_POLNA
Length = 132
Score = 50.4 bits (119), Expect(2) = 1e-12
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGG-RGRGGDY 283
+G GR+I VNEA P+ RPP GG GGG GYGGGG R GG Y
Sbjct: 65 NGQSLGGRSITVNEARPMEARPPRTGGFGGGGGYGGGGDRSGGGGY 110
Score = 45.8 bits (107), Expect(2) = 1e-12
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[19][TOP]
>UniRef100_C5T9S8 RNP-1 like RNA-binding protein n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T9S8_ACIDE
Length = 125
Score = 51.2 bits (121), Expect(2) = 1e-12
Identities = 26/48 (54%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPP------GGRGGGRGYGGGGRGRGGDY 283
G F GR + VNEA P+ R P GG GGG GYGGGGR GG Y
Sbjct: 66 GQNFGGRDLVVNEARPMEPRAPRSGGFGGGNGGGGGYGGGGRSGGGGY 113
Score = 45.1 bits (105), Expect(2) = 1e-12
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL FS++G+V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[20][TOP]
>UniRef100_C6X616 RNA-binding protein n=1 Tax=Flavobacteriaceae bacterium 3519-10
RepID=C6X616_FLAB3
Length = 122
Score = 54.3 bits (129), Expect(2) = 2e-12
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
TR + L +LFS+FG V A + TDRETGRSRGFGFV + K+A
Sbjct: 13 TREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEMSDEDGKNA 58
Score = 41.2 bits (95), Expect(2) = 2e-12
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP----GGRGGGRGYGGGG-RGRGGDY 283
+G E G+ + V+EA P ++P RGGG GYGGGG RG G Y
Sbjct: 63 NGKELDGKELNVSEAKPREDKPKRSFDNNRGGGGGYGGGGNRGGSGGY 110
[21][TOP]
>UniRef100_A5GLX5 RNA-binding protein, RRM domain n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GLX5_SYNPW
Length = 116
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPL-----GERPPGGRGGGRGYGGGGRGRGG 277
+ E+MGR IRVN+ATP G GG GGG GYGGGG G GG
Sbjct: 61 DLQNVEWMGRMIRVNKATPRERTGGGGGGRGGYGGGGGYGGGGGGGGG 108
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEAN 126
+DL +LFS++G V+ A + DRETGR RGFGFV + ++
Sbjct: 15 EDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSD 52
[22][TOP]
>UniRef100_Q5K255 Putative 29 kDa ribonucleoprotein A (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K255_GUITH
Length = 170
Score = 48.1 bits (113), Expect(2) = 3e-12
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDR-ETGRSRGFGFVT 114
DTR +DL FS+FG V+D V DR + GRSRGFGFVT
Sbjct: 55 DTRGEDLMQYFSQFGKVDDTTVIMDRDDPGRSRGFGFVT 93
Score = 47.0 bits (110), Expect(2) = 3e-12
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATPLGERPPGGRGGG----RGYGGGGRGRGGD 280
++ D E+MGR IRVN + P G+ P GG GGG G+ G GR GGD
Sbjct: 105 SKTDNVEWMGRNIRVNMSRPRGDGPRGGGGGGGMRSGGFRGDGRRGGGD 153
[23][TOP]
>UniRef100_A1WE85 RNP-1 like RNA-binding protein n=1 Tax=Verminephrobacter eiseniae
EF01-2 RepID=A1WE85_VEREI
Length = 175
Score = 49.7 bits (117), Expect(2) = 3e-12
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
+G GR+I VNEA P+ RPP R GG GYGGGG G GG Y
Sbjct: 65 NGQPLGGRSIVVNEARPMEPRPP--RSGGGGYGGGGGGGGGGY 105
Score = 45.1 bits (105), Expect(2) = 3e-12
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[24][TOP]
>UniRef100_A0LED5 RNP-1 like RNA-binding protein n=1 Tax=Syntrophobacter fumaroxidans
MPOB RepID=A0LED5_SYNFM
Length = 122
Score = 47.8 bits (112), Expect(2) = 3e-12
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGER----PPGGRGGGRGYGGGGRGRGGDY 283
E +G +F GR + VNEA +R P GG GGGRG GGG GRGG +
Sbjct: 63 ELNGKDFNGRPLTVNEAKQREDRGRGGPRGGSGGGRGGYGGGGGRGGGF 111
Score = 47.0 bits (110), Expect(2) = 3e-12
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
T ++ L LFS+ G VE A V DRE+GRSRGFGFV +
Sbjct: 14 TSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEM 51
[25][TOP]
>UniRef100_A9C1L2 RNP-1 like RNA-binding protein n=1 Tax=Delftia acidovorans SPH-1
RepID=A9C1L2_DELAS
Length = 176
Score = 47.4 bits (111), Expect(2) = 4e-12
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL FS+FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 47.0 bits (110), Expect(2) = 4e-12
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 14/57 (24%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP-----------GGRG---GGRGYGGGGRGRGGDY 283
+G GR++ VNEA P+ RPP GG G GG GYGGGGRG GG Y
Sbjct: 65 NGQPLGGRSLVVNEARPMEPRPPRSGGFGGGGGGGGYGRGDGGGGYGGGGRGDGGGY 121
[26][TOP]
>UniRef100_Q0IBB2 Putative RNA-binding protein n=1 Tax=Synechococcus sp. CC9311
RepID=Q0IBB2_SYNS3
Length = 126
Score = 50.1 bits (118), Expect(2) = 4e-12
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRG--YGGGGRGRGGDY 283
+ E+MGR IRVN+ATP GG GGGRG GGGG G GG Y
Sbjct: 61 DLQNVEWMGRMIRVNKATPRERTGGGGGGGGRGGYGGGGGNGGGGGY 107
Score = 44.3 bits (103), Expect(2) = 4e-12
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
+DL +LF ++G V+ A + DRETGR RGFGFV +
Sbjct: 15 EDLLDLFGQYGEVKSASLPLDRETGRKRGFGFVEM 49
[27][TOP]
>UniRef100_B9MIH3 RNP-1 like RNA-binding protein n=1 Tax=Diaphorobacter sp. TPSY
RepID=B9MIH3_DIAST
Length = 155
Score = 47.8 bits (112), Expect(2) = 6e-12
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 14/55 (25%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--------------GGRGGGRGYGGGGRGRGG 277
+G GR+I VNEA P+ RPP GGR GG GYGGGG G GG
Sbjct: 65 NGQSLGGRSIVVNEARPMEARPPRSGGGFGGGGGGYGGGRSGGGGYGGGGGGYGG 119
Score = 46.2 bits (108), Expect(2) = 6e-12
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
R DL FS+FGAV A V +R+TGRS+GFGFV + ++A
Sbjct: 15 RDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDA 55
[28][TOP]
>UniRef100_Q12FV9 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Polaromonas sp. JS666 RepID=Q12FV9_POLSJ
Length = 134
Score = 50.4 bits (119), Expect(2) = 6e-12
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGG-RGRGGDY 283
+G GR+I VNEA P+ RPP GG GGG GYGGGG R GG Y
Sbjct: 65 NGQSLGGRSITVNEARPMEARPPRTGGFGGGGGYGGGGDRSGGGGY 110
Score = 43.5 bits (101), Expect(2) = 6e-12
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F FG++ A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[29][TOP]
>UniRef100_B2IUC2 RNP-1 like RNA-binding protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IUC2_NOSP7
Length = 106
Score = 47.0 bits (110), Expect(2) = 6e-12
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
D +DL+ +F+++G V+ V TDRETGR RGF FV + A ++A
Sbjct: 11 DVTQEDLSGIFAEYGTVKRVQVPTDRETGRPRGFAFVEMGTEAEETA 57
Score = 47.0 bits (110), Expect(2) = 6e-12
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGER-PPGGRGGGRGYGGGGRGRGGDY 283
DG E+MGR ++VN+A P +R G GG RG GGG GRGG Y
Sbjct: 63 DGAEWMGRDLKVNKAKPKEDRGDRGSFGGNRGGYGGGGGRGGRY 106
[30][TOP]
>UniRef100_A1VUR7 RNP-1 like RNA-binding protein n=1 Tax=Polaromonas
naphthalenivorans CJ2 RepID=A1VUR7_POLNA
Length = 152
Score = 47.4 bits (111), Expect(2) = 7e-12
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP---GGRGGGRGYGGGGRGRGGDY 283
+G GR++ VNEA P+ RPP G GGG GYGGG G GG Y
Sbjct: 65 NGQPLGGRSVVVNEARPMEARPPRTGGFGGGGGGYGGGAGGGGGGY 110
Score = 46.2 bits (108), Expect(2) = 7e-12
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQA 59
[31][TOP]
>UniRef100_A5GPV8 RNA-binding protein, RRM domain n=1 Tax=Synechococcus sp. RCC307
RepID=A5GPV8_SYNR3
Length = 204
Score = 55.1 bits (131), Expect(2) = 1e-11
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
GTE MGR +R+N+A P G R G GGG GYGGGG GRGG
Sbjct: 64 GTELMGRPLRINKAEPRGSR---GGGGGGGYGGGGGGRGG 100
Score = 38.1 bits (87), Expect(2) = 1e-11
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAK 135
+D+ LF+ FG V + + +R+TGR RGF FV + A +
Sbjct: 15 EDIIELFASFGEVANCSLPLERDTGRKRGFAFVEMADEATE 55
[32][TOP]
>UniRef100_A3YVC6 RNA-binding protein RbpD n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YVC6_9SYNE
Length = 113
Score = 47.8 bits (112), Expect(2) = 1e-11
Identities = 25/46 (54%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGG---RGGGRGYGGGGRGRGG 277
+ E+M R IRVN+A P G GG RGGG GYGGGG G GG
Sbjct: 61 DLQNVEWMNRMIRVNKAEPRGGGGGGGGGNRGGGGGYGGGGGGYGG 106
Score = 45.1 bits (105), Expect(2) = 1e-11
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
D +DL +LFS++G V + DRETGR RGF FV L +A
Sbjct: 11 DAEQEDLRDLFSQYGEVRQCSLPLDRETGRKRGFAFVELANDA 53
[33][TOP]
>UniRef100_Q9FNR1 Putative uncharacterized protein At5g61030 n=1 Tax=Arabidopsis
thaliana RepID=Q9FNR1_ARATH
Length = 309
Score = 50.1 bits (118), Expect(2) = 2e-11
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
D L F+K+G V D V DRETGRSRGFGFVT + AA SA + +HG
Sbjct: 54 DSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHG 108
Score = 42.4 bits (98), Expect(2) = 2e-11
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
DG + GR ++VN A +R GG GG GYGGGG G GG
Sbjct: 102 DGRDLHGRVVKVNYAN---DRTSGGGFGGGGYGGGGGGYGG 139
[34][TOP]
>UniRef100_C5CSB2 RNP-1 like RNA-binding protein n=1 Tax=Variovorax paradoxus S110
RepID=C5CSB2_VARPS
Length = 181
Score = 47.0 bits (110), Expect(2) = 2e-11
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G GR++ VNEA P+ RPP GGG G GGGG G GG
Sbjct: 65 NGQPLGGRSVVVNEARPMEARPPRSGGGGYGGGGGGYGGGG 105
Score = 45.4 bits (106), Expect(2) = 2e-11
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[35][TOP]
>UniRef100_Q313C0 RNA-binding region RNP-1 n=1 Tax=Desulfovibrio desulfuricans subsp.
desulfuricans str. G20 RepID=Q313C0_DESDG
Length = 114
Score = 48.5 bits (114), Expect(2) = 2e-11
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAAKSA 141
DDL F +FGAV+ + TD +TGRS+GFGFV + EANAA A
Sbjct: 15 DDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEA 61
Score = 43.9 bits (102), Expect(2) = 2e-11
Identities = 25/48 (52%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG-----RGRGGDY 283
+G E GR+I VNEA P ER GG GG R GGGG G+GG Y
Sbjct: 63 NGREMGGRSITVNEARPRPERSGGGGGGFRRSGGGGGYGNRGGQGGGY 110
[36][TOP]
>UniRef100_A1TWH3 RNP-1-like RNA-binding protein n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TWH3_ACIAC
Length = 123
Score = 47.0 bits (110), Expect(2) = 2e-11
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DDL FS++G+V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDDDLQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 45.1 bits (105), Expect(2) = 2e-11
Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGGRGRGGDY 283
G F GR + VNEA P+ RPP GG GGG G G GG GG Y
Sbjct: 66 GQNFGGRDLVVNEARPMEPRPPRSGGFGGGNGGGFGGGRSGGGY 109
[37][TOP]
>UniRef100_Q2QQ97 Os12g0502200 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QQ97_ORYSJ
Length = 258
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
A T DG + GR IRVN A ER G R GG GYGGGG G GG
Sbjct: 87 AAITALDGKDLDGRNIRVNTAN---ERTGGFRSGGGGYGGGGYGGGG 130
Score = 44.7 bits (104), Expect(2) = 3e-11
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T L + F+ +G V +A + DRETGRSRGFGF+T ++ SA
Sbjct: 42 TDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASA 87
[38][TOP]
>UniRef100_A2ZKT5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZKT5_ORYSI
Length = 257
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
A T DG + GR IRVN A ER G R GG GYGGGG G GG
Sbjct: 87 AAITALDGKDLDGRNIRVNTAN---ERTGGFRSGGGGYGGGGYGGGG 130
Score = 44.7 bits (104), Expect(2) = 3e-11
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T L + F+ +G V +A + DRETGRSRGFGF+T ++ SA
Sbjct: 42 TDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASA 87
[39][TOP]
>UniRef100_Q7UA83 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Synechococcus sp. WH 8102 RepID=Q7UA83_SYNPX
Length = 214
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
G E MGR +R+N+A P G P GG GG RG GGGG G GG Y
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRGGGGGYRG-GGGGYGGGGGY 104
Score = 39.7 bits (91), Expect(2) = 3e-11
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF++FG V + + +R+TGR RGF FV + A + A
Sbjct: 15 EDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDA 57
[40][TOP]
>UniRef100_Q05966 Glycine-rich RNA-binding protein 10 n=1 Tax=Brassica napus
RepID=GRP10_BRANA
Length = 169
Score = 46.2 bits (108), Expect(2) = 3e-11
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 16 DLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
+L FS+FG V D+ + DRETGRSRGFGFVT +
Sbjct: 21 ELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFK 55
Score = 45.4 bits (106), Expect(2) = 3e-11
Identities = 27/44 (61%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGG-GGRGRGG 277
E +G E GRTI VNEA G GG GGGRG GG GGRG GG
Sbjct: 66 EMNGKELDGRTITVNEAQSRG----GGGGGGRGGGGYGGRGGGG 105
[41][TOP]
>UniRef100_Q121M2 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Polaromonas sp. JS666 RepID=Q121M2_POLSJ
Length = 151
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 14/55 (25%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--------------GGRGGGRGYGGGGRGRGG 277
+G GR++ VNEA P+ RPP GG GGG GYGGGG GR G
Sbjct: 65 NGQPLGGRSVVVNEARPMEARPPRSGGFGGGSGGGGYGGGGGGGGYGGGGGGRSG 119
Score = 44.7 bits (104), Expect(2) = 3e-11
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FG+V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[42][TOP]
>UniRef100_B1Y6Y3 RNP-1 like RNA-binding protein n=1 Tax=Leptothrix cholodnii SP-6
RepID=B1Y6Y3_LEPCP
Length = 157
Score = 49.7 bits (117), Expect(2) = 4e-11
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAA 132
R +DL FS+FGAV A V DRETGRS+GFGFV + EA AA
Sbjct: 15 RDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAA 60
Score = 41.6 bits (96), Expect(2) = 4e-11
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGR---GGGRGYGGGGRGRGGDY 283
+G GR I VNEA P ++P G R GGG GGGGR GG Y
Sbjct: 65 NGQAIGGRAIVVNEARPREDKPGGFRSPYGGGGAGGGGGRSGGGGY 110
[43][TOP]
>UniRef100_A8MSB9 Uncharacterized protein At4g13850.3 n=1 Tax=Arabidopsis thaliana
RepID=A8MSB9_ARATH
Length = 144
Score = 45.8 bits (107), Expect(2) = 4e-11
Identities = 28/53 (52%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEAT--PLGERPPGG----RGGGRGYGGGGRGRGG 277
A +E DG E GR IRVN A P R GG GGG GYGGGG G GG
Sbjct: 91 AAISEMDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSGGGGGYGGGGDGGGG 143
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+ FG V DA V DRETGRSRGFGFV A +A
Sbjct: 51 LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATA 91
[44][TOP]
>UniRef100_Q7UEZ2 RNA-binding protein n=1 Tax=Rhodopirellula baltica
RepID=Q7UEZ2_RHOBA
Length = 206
Score = 47.8 bits (112), Expect(2) = 5e-11
Identities = 25/42 (59%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERP-PGGRGGGRGYGGGGRGRGG 277
+G E GR++ VNEA P R GG GGG G GGGGRGRGG
Sbjct: 128 NGHEIDGRSVTVNEARPREPRSGGGGGGGGYGGGGGGRGRGG 169
Score = 43.1 bits (100), Expect(2) = 5e-11
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
++L F ++G V + DRETGRSRGF FV + +A AK A + H + G
Sbjct: 80 EELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDG 134
[45][TOP]
>UniRef100_UPI000180C465 PREDICTED: similar to cold-inducible RNA-binding protein n=1
Tax=Ciona intestinalis RepID=UPI000180C465
Length = 167
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
D DDLT FS FG VE + TDR+TGRSRGF FVT
Sbjct: 15 DATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVT 52
Score = 39.3 bits (90), Expect(2) = 5e-11
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Frame = +2
Query: 164 EFMGRTIRVNEATP---------LGERPPGGR--GGGRGYGGGGRGRGG 277
+F+GR++ V EA G R GGR GGG GYGGGG G GG
Sbjct: 70 DFLGRSVTVREAQSKRGGGGGGGYGGRGGGGRYGGGGGGYGGGGGGYGG 118
[46][TOP]
>UniRef100_Q3EA40 Putative uncharacterized protein At4g13850.2 n=1 Tax=Arabidopsis
thaliana RepID=Q3EA40_ARATH
Length = 153
Score = 45.4 bits (106), Expect(2) = 6e-11
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+ FG V DA V DRETGRSRGFGFV A +A
Sbjct: 51 LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATA 91
Score = 45.1 bits (105), Expect(2) = 6e-11
Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEAT--PLGERPPGGRGGGRGYGGGGRGRGG 277
A +E DG E GR IRVN A P R GG GGG YGGGG G GG
Sbjct: 91 AAISEMDGKELNGRHIRVNPANDRPSAPRAYGG-GGGYSYGGGGGGYGG 138
[47][TOP]
>UniRef100_C5XG78 Putative uncharacterized protein Sb03g043760 n=1 Tax=Sorghum
bicolor RepID=C5XG78_SORBI
Length = 147
Score = 46.2 bits (108), Expect(2) = 6e-11
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
DG E GR +RVN A +RP G RGGG GYGGGG G GG
Sbjct: 99 DGKEIDGRPVRVNIA---NDRPAGNRGGG-GYGGGGFGGGG 135
Score = 44.3 bits (103), Expect(2) = 6e-11
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L FS FG V +A V TDR+TG+SRGFGFV ++ A +A
Sbjct: 53 LREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANA 93
[48][TOP]
>UniRef100_Q2UQ21 Predicted protein n=1 Tax=Aspergillus oryzae RepID=Q2UQ21_ASPOR
Length = 127
Score = 49.7 bits (117), Expect(2) = 6e-11
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T + L + F K+GAVE+A V DR+TGRSRGFGFV + A A
Sbjct: 13 TTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEA 58
Score = 40.8 bits (94), Expect(2) = 6e-11
Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPP---------------GGRGGG-RGYGGGGRG 268
A A E + EF GRTIRV++A+ ER P GG GGG GYGGG RG
Sbjct: 58 AAAHEMNNQEFDGRTIRVDKAS---ERAPRNDGGFQCRGGYNQRGGNGGGYGGYGGGSRG 114
Query: 269 RGGD 280
GD
Sbjct: 115 GYGD 118
[49][TOP]
>UniRef100_B8N014 Glycine-rich RNA-binding protein, putative n=1 Tax=Aspergillus
flavus NRRL3357 RepID=B8N014_ASPFN
Length = 127
Score = 49.7 bits (117), Expect(2) = 6e-11
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T + L + F K+GAVE+A V DR+TGRSRGFGFV + A A
Sbjct: 13 TTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEA 58
Score = 40.8 bits (94), Expect(2) = 6e-11
Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPP---------------GGRGGG-RGYGGGGRG 268
A A E + EF GRTIRV++A+ ER P GG GGG GYGGG RG
Sbjct: 58 AAAHEMNNQEFDGRTIRVDKAS---ERAPRNDGGFQGRGGYNQRGGNGGGYGGYGGGSRG 114
Query: 269 RGGD 280
GD
Sbjct: 115 GYGD 118
[50][TOP]
>UniRef100_C5CY78 RNP-1 like RNA-binding protein n=1 Tax=Variovorax paradoxus S110
RepID=C5CY78_VARPS
Length = 137
Score = 47.4 bits (111), Expect(2) = 6e-11
Identities = 25/57 (43%), Positives = 28/57 (49%), Gaps = 16/57 (28%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP----------------GGRGGGRGYGGGGRGRGG 277
+G GR + VNEA P+ RPP GG GGG GYGGGG GR G
Sbjct: 65 NGHSLQGRALTVNEARPMEARPPRTGGGGGYGGGGGGGYGGGGGGGGYGGGGGGRSG 121
Score = 43.1 bits (100), Expect(2) = 6e-11
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACY*VRRHRVHG 174
R +DL F +FG++ A V +R+TGRS+GFGFV + +A A +A + H + G
Sbjct: 15 RDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVEAMNGHSLQG 71
[51][TOP]
>UniRef100_B9XRV6 RNP-1 like RNA-binding protein n=1 Tax=bacterium Ellin514
RepID=B9XRV6_9BACT
Length = 118
Score = 54.3 bits (129), Expect(2) = 6e-11
Identities = 29/49 (59%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG--RGG 277
A + G EF GR + VNEA P ERPP GGG GYGGGGRG RGG
Sbjct: 59 AAVAQYHGKEFQGRALTVNEARPREERPP---GGGGGYGGGGRGGDRGG 104
Score = 36.2 bits (82), Expect(2) = 6e-11
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T +DL + FS G V + DR TGRSRGF F+ + + A A
Sbjct: 14 TTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADA 59
[52][TOP]
>UniRef100_UPI00016C4952 RNA-binding protein n=1 Tax=Gemmata obscuriglobus UQM 2246
RepID=UPI00016C4952
Length = 117
Score = 46.6 bits (109), Expect(2) = 6e-11
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGR-GYGGGGRGRGG 277
+GT+ GR++ VNEA P GG GGGR GYGGGG GRGG
Sbjct: 61 NGTQVGGRSLTVNEAKPR----EGGGGGGRGGYGGGGGGRGG 98
Score = 43.9 bits (102), Expect(2) = 6e-11
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
T D+L LFS++G V A + DRETGR RGF FV +
Sbjct: 12 TTEDELRELFSQYGTVTKAQIVMDRETGRPRGFAFVEM 49
[53][TOP]
>UniRef100_A2C8A8 RNA-binding protein RbpD n=1 Tax=Prochlorococcus marinus str. MIT
9303 RepID=A2C8A8_PROM3
Length = 104
Score = 48.1 bits (113), Expect(2) = 6e-11
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRG 274
E+MGR IRVN+ATP ER GG GG GYGGGG G G
Sbjct: 66 EWMGRMIRVNKATP-RERTGGGGGGRGGYGGGGGGGG 101
Score = 42.4 bits (98), Expect(2) = 6e-11
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
+DL +LFS++G V+ + DRETGR RGF FV + +A
Sbjct: 15 EDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMANDA 53
[54][TOP]
>UniRef100_B8Y988 Cold response protein 2 n=1 Tax=Metarhizium anisopliae
RepID=B8Y988_METAN
Length = 183
Score = 46.6 bits (109), Expect(2) = 8e-11
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT-LEANAAKSA 141
T L F +FGAVE+A V DR+TGRSRGFGFV + N A++A
Sbjct: 13 TEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNA 59
Score = 43.5 bits (101), Expect(2) = 8e-11
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+ EF GRTIRV++A+ P GG GGGRG G G GRGG
Sbjct: 64 NNVEFDGRTIRVDKAS--DNSPRGGYGGGRGGGSGFGGRGG 102
[55][TOP]
>UniRef100_Q08I87 Putative glycine-rich RNA-binding protein n=1 Tax=Dianthus
caryophyllus RepID=Q08I87_DIACA
Length = 163
Score = 46.6 bits (109), Expect(2) = 8e-11
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L F+KFG V D+ + DRETGRSRGFGFVT
Sbjct: 22 LAEAFNKFGEVTDSKIINDRETGRSRGFGFVT 53
Score = 43.5 bits (101), Expect(2) = 8e-11
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
E +G E GR+I VNEA G GG GG R GGGG G GG
Sbjct: 66 EMNGKELDGRSITVNEAQSRGSGGGGGGGGYRSGGGGGGGYGG 108
[56][TOP]
>UniRef100_C5T9S7 RNP-1 like RNA-binding protein (Fragment) n=1 Tax=Acidovorax
delafieldii 2AN RepID=C5T9S7_ACIDE
Length = 116
Score = 45.4 bits (106), Expect(2) = 8e-11
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 44.7 bits (104), Expect(2) = 8e-11
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--GGRGGGR--GYGGGGRGRGGDY 283
+G GR+I VNEA P+ RPP GG GGG GYGGGG GG +
Sbjct: 65 NGQPLGGRSIVVNEARPMEPRPPRSGGFGGGSGGGYGGGGGRSGGGF 111
[57][TOP]
>UniRef100_B6TI13 Glycine-rich RNA-binding protein 7 n=1 Tax=Zea mays
RepID=B6TI13_MAIZE
Length = 276
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG GR+IRVN A E+ G RGGG GYGGGG G GG Y
Sbjct: 86 AAITALDGKTLDGRSIRVNHA---NEKTGGFRGGG-GYGGGGYGGGGGY 130
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGFVT ++ SA
Sbjct: 46 LRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASA 86
[58][TOP]
>UniRef100_B4F7T1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F7T1_MAIZE
Length = 254
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG GR+IRVN A E+ G RGGG GYGGGG G GG Y
Sbjct: 86 AAITALDGKTLDGRSIRVNHA---NEKTGGFRGGG-GYGGGGYGGGGGY 130
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGFVT ++ SA
Sbjct: 46 LRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASA 86
[59][TOP]
>UniRef100_B6UB95 Glycine-rich RNA-binding protein 7 n=1 Tax=Zea mays
RepID=B6UB95_MAIZE
Length = 252
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG GR+IRVN A E+ G RGGG GYGGGG G GG Y
Sbjct: 86 AAITALDGKTLDGRSIRVNHA---NEKTGGFRGGG-GYGGGGYGGGGGY 130
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGFVT ++ SA
Sbjct: 46 LRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASA 86
[60][TOP]
>UniRef100_Q7ZYV6 Hyperosmotic glycine rich protein n=1 Tax=Salmo salar
RepID=Q7ZYV6_SALSA
Length = 205
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY----GGGGRGRGGDY 283
+G GRTIRVNEA G+ GGRGGG GY GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEA---GQGGGGGRGGGGGYRGSRGGGGYGGGGGY 110
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
DT L FSK+G + V DRETGR RGFGFV
Sbjct: 15 DTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFV 51
[61][TOP]
>UniRef100_A2C5L0 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C5L0_PROM3
Length = 202
Score = 50.8 bits (120), Expect(2) = 1e-10
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P G GGG G GGGG G GG
Sbjct: 64 GAEMMGRPLRINKAEPRGSAPRRGGGGGYGGGGGGYGGGG 103
Score = 38.9 bits (89), Expect(2) = 1e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ FG V + + +R+TGR RGF FV + +A+ A
Sbjct: 15 EDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPA 57
[62][TOP]
>UniRef100_Q0KIW2 Glycine-rich RNA-binding protein n=1 Tax=Triticum aestivum
RepID=Q0KIW2_WHEAT
Length = 163
Score = 51.2 bits (121), Expect(2) = 1e-10
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L N FSK+G V D+ + TDRETGRSRGFGFVT ++ A
Sbjct: 17 TDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEA 59
Score = 38.5 bits (88), Expect(2) = 1e-10
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G + GR I VNEA R GG GGG G+GGGG G GG
Sbjct: 68 NGQDLDGRNITVNEAQ---SRRSGGGGGG-GFGGGGGGYGG 104
[63][TOP]
>UniRef100_UPI0001862007 hypothetical protein BRAFLDRAFT_58365 n=1 Tax=Branchiostoma
floridae RepID=UPI0001862007
Length = 178
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGG-RGYGGGGRGRGGDY 283
D TE R I V+ A P GER GG GGG RG GGGG G GG Y
Sbjct: 67 DQTELGTRVINVSVAKPQGERRGGGGGGGYRGRGGGGYGGGGGY 110
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL--EANAAKS 138
DD+ FS G + D + TDRETG+SRGF FVT E +AA++
Sbjct: 19 DDVYTAFSDHGQIVDCKLITDRETGKSRGFAFVTFSDEDSAARA 62
[64][TOP]
>UniRef100_Q03878 Glycine-rich RNA-binding protein n=1 Tax=Daucus carota
RepID=GRP1_DAUCA
Length = 157
Score = 47.4 bits (111), Expect(2) = 1e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
T + L FS+FG + D+ + DRETGRSRGFGFVT +
Sbjct: 17 TNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFK 55
Score = 42.4 bits (98), Expect(2) = 1e-10
Identities = 25/43 (58%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGR--GGGRGYGGGGRGRGG 277
+G E GR I VNEA G GGR GGG GYGGGG G GG
Sbjct: 68 NGQELDGRNITVNEAQSRGSGGGGGRREGGGGGYGGGG-GYGG 109
[65][TOP]
>UniRef100_A1VWW4 RNP-1 like RNA-binding protein n=1 Tax=Polaromonas
naphthalenivorans CJ2 RepID=A1VWW4_POLNA
Length = 150
Score = 45.1 bits (105), Expect(2) = 1e-10
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FGAV A V +R+TGRS+GFGFV + +A A
Sbjct: 15 RDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQA 59
Score = 44.7 bits (104), Expect(2) = 1e-10
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP----------GGRGGGRGYGGGGRGRGG 277
+G GR+I VNEA P+ RPP G R GG GYGGG R GG
Sbjct: 65 NGQPLGGRSITVNEARPMEARPPRTGGFGGGGGGDRSGGGGYGGGDRSGGG 115
[66][TOP]
>UniRef100_B9EN93 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B9EN93_SALSA
Length = 161
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY----GGGGRGRGGDY 283
+G GRTIRVNEA G+ GGRGGG GY GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEA---GQGGGGGRGGGGGYRGSRGGGGYGGGGGY 110
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
DT L FSK+G + V DRETGR RGFGFV
Sbjct: 15 DTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFV 51
[67][TOP]
>UniRef100_B5RI95 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B5RI95_SALSA
Length = 160
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY----GGGGRGRGGDY 283
+G GRTIRVNEA G+ GGRGGG GY GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEA---GQGGGGGRGGGGGYRGSRGGGGYGGGGGY 110
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
DT L FSK+G + V DRETGR RGFGFV
Sbjct: 15 DTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFV 51
[68][TOP]
>UniRef100_Q9LIS2 Glycine-rich RNA binding protein-like n=1 Tax=Arabidopsis thaliana
RepID=Q9LIS2_ARATH
Length = 136
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 23/40 (57%), Positives = 23/40 (57%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG 268
E DG E GR IRVN AT P GGG GYGGGG G
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAPRSSFGGGGGYGGGGGG 134
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T L F+ FG V +A V DRETGRSRGFGFV+
Sbjct: 46 TDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVS 82
[69][TOP]
>UniRef100_Q8LDS0 Glycine-rich RNA binding protein, putative n=1 Tax=Arabidopsis
thaliana RepID=Q8LDS0_ARATH
Length = 136
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 23/40 (57%), Positives = 23/40 (57%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG 268
E DG E GR IRVN AT P GGG GYGGGG G
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAPRSSFGGGGGYGGGGGG 134
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T L F+ FG V +A V DRETGRSRGFGFV+
Sbjct: 46 TDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVS 82
[70][TOP]
>UniRef100_B5DGQ0 Hyperosmotic glycine rich protein n=1 Tax=Salmo salar
RepID=B5DGQ0_SALSA
Length = 126
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY----GGGGRGRGGDY 283
+G GRTIRVNEA G+ GGRGGG GY GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEA---GQGGGGGRGGGGGYRGSRGGGGYGGGGGY 110
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
DT L FSK+G + V DRETGR RGFGFV
Sbjct: 15 DTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFV 51
[71][TOP]
>UniRef100_Q566W6 Zgc:112425 n=1 Tax=Danio rerio RepID=Q566W6_DANRE
Length = 185
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT L + FSK+G + + VA +RET RSRGFGFVT E
Sbjct: 15 DTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFE 54
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G GRTIRV+EA G G GGG Y GGG GRGG
Sbjct: 67 NGKSVDGRTIRVDEAGKGGGGGGGRSGGGGSYRGGGGGRGG 107
[72][TOP]
>UniRef100_A1TWH4 RNP-1-like RNA-binding protein n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TWH4_ACIAC
Length = 176
Score = 45.8 bits (107), Expect(2) = 1e-10
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP-----------GGRGGGRGYGGGGRGRGGDY 283
+G GR+I VNEA P+ RPP GG GGGR GG G G GG Y
Sbjct: 65 NGQALGGRSIVVNEARPMEPRPPRSGGGFGGGGGGGYGGGRSGGGYGGGGGGGY 118
[73][TOP]
>UniRef100_Q03251 Glycine-rich RNA-binding protein 8 n=2 Tax=Arabidopsis thaliana
RepID=GRP8_ARATH
Length = 169
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T +DL FS+FG V D+ + DRE+GRSRGFGFVT + A
Sbjct: 17 TNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKA 59
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG--RGRGGDY 283
E +G E GR I VNEA G GG GGGRG GGG G GG Y
Sbjct: 66 EMNGKELDGRVITVNEAQSRGS---GGGGGGRGGSGGGYRSGGGGGY 109
[74][TOP]
>UniRef100_Q41518 Single-stranded nucleic acid binding protein n=1 Tax=Triticum
aestivum RepID=Q41518_WHEAT
Length = 167
Score = 45.8 bits (107), Expect(2) = 1e-10
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T ++L FS++G + DA + DRETGRSRGFGFVT
Sbjct: 17 TDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVT 53
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGG-----GGRGRGGDY 283
R E +G E GR I VNEA R GG GGG GYGG GG G GG Y
Sbjct: 61 RQAIEEMNGKELDGRNITVNEAQ--SRRSGGGGGGGGGYGGQRGGGGGYGGGGGY 113
[75][TOP]
>UniRef100_Q3E9N7 Putative uncharacterized protein At4g39260.2 n=1 Tax=Arabidopsis
thaliana RepID=Q3E9N7_ARATH
Length = 126
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T +DL FS+FG V D+ + DRE+GRSRGFGFVT + A
Sbjct: 17 TNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKA 59
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG--RGRGGDY 283
E +G E GR I VNEA G GG GGGRG GGG G GG Y
Sbjct: 66 EMNGKELDGRVITVNEAQSRGS---GGGGGGRGGSGGGYRSGGGGGY 109
[76][TOP]
>UniRef100_A3Z801 RNA-binding protein RbpD n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z801_9SYNE
Length = 112
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+ E+MGR IRVN+ATP GG GGG G GGG RG GG
Sbjct: 61 DLQNVEWMGRMIRVNKATP--RERTGGGGGGYGGGGGNRGGGG 101
Score = 42.4 bits (98), Expect(2) = 1e-10
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
+DL +LF+++G V+ A + DRETGR RGF FV +
Sbjct: 15 EDLLDLFNQYGEVKSASLPLDRETGRKRGFAFVEM 49
[77][TOP]
>UniRef100_Q7V6R5 RNA-binding protein RbpD n=1 Tax=Prochlorococcus marinus str. MIT
9313 RepID=Q7V6R5_PROMM
Length = 111
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
E+MGR IRVN+ATP GG GG GYGGGG G GG
Sbjct: 66 EWMGRMIRVNKATP--RERTGGGGGRGGYGGGGGGGGG 101
Score = 42.4 bits (98), Expect(2) = 1e-10
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
+DL +LFS++G V+ + DRETGR RGF FV + +A
Sbjct: 15 EDLLDLFSQYGEVKTCSLPLDRETGRKRGFAFVEMTNDA 53
[78][TOP]
>UniRef100_A2BZB6 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. NATL1A
RepID=A2BZB6_PROM1
Length = 250
Score = 49.3 bits (116), Expect(2) = 2e-10
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPG---GRGGGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P G GGG GYGGGG G GG
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRRGGYGGGGGGGYGGGGYGGGG 106
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LFS FG V + + +R+TGR RGF FV + A +++
Sbjct: 15 EDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEAS 57
[79][TOP]
>UniRef100_A6GBL5 RNA-binding protein n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6GBL5_9DELT
Length = 189
Score = 49.7 bits (117), Expect(2) = 2e-10
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L +F++FGA+EDA V DRETGRSRGFGFVT
Sbjct: 15 LKEVFAEFGALEDARVILDRETGRSRGFGFVT 46
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 26/52 (50%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPL-------GERPPGG----RGGGRGYGGGGRGRGG 277
DG E GR IRV+ A G RP GG RGGG G GGGGRG G
Sbjct: 60 DGQEVDGRRIRVDRAQEKERRGGGRGPRPGGGGGGPRGGGGGGGGGGRGGYG 111
[80][TOP]
>UniRef100_A3Z3V9 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Synechococcus sp. RS9917 RepID=A3Z3V9_9SYNE
Length = 168
Score = 49.7 bits (117), Expect(2) = 2e-10
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRG--GGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P G G GG GYGGGG G GG
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRRGGGGYGGGGYGGGGYGGGG 105
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ +G V + + +R+TGR RGF F+ + AA++A
Sbjct: 15 EDVIELFAAYGEVTNCALPLERDTGRKRGFAFIEMADEAAEAA 57
[81][TOP]
>UniRef100_B4F8A7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F8A7_MAIZE
Length = 308
Score = 44.3 bits (103), Expect(2) = 2e-10
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + FS+FG V +A + DRE+GRSRGFGF+T + SA
Sbjct: 48 LKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASA 88
Score = 44.3 bits (103), Expect(2) = 2e-10
Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPL--GERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG E GR IRVN A G R GG G G GYGGGG G Y
Sbjct: 88 AAMTSMDGKELQGRNIRVNHANERAGGIRGGGGFGAGGGYGGGGGYPTGGY 138
[82][TOP]
>UniRef100_A5GHM5 RNA-binding protein, RRM domain n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GHM5_SYNPW
Length = 207
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG--RGRGGDY 283
G E MGR +R+N+A P G P G GG G GGGG RG GG Y
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRRGGGGYGGGGGGGGYRGGGGGY 107
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ FG V + + +R+TGR RGF FV + +AA++A
Sbjct: 15 EDVIELFAAFGEVTNCALPLERDTGRKRGFAFVEMADDAAEAA 57
[83][TOP]
>UniRef100_A4CWS8 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Synechococcus sp. WH 7805 RepID=A4CWS8_SYNPV
Length = 197
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P G GGG GYGGGG G G
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRRG-GGGGGYGGGGGGGYG 102
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ FG V + + +R+TGR RGF FV + +AA++A
Sbjct: 15 EDVIELFAAFGEVTNCALPLERDTGRKRGFAFVEMADDAAEAA 57
[84][TOP]
>UniRef100_C7YHF2 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YHF2_NECH7
Length = 178
Score = 46.6 bits (109), Expect(2) = 2e-10
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV--TLEANAAKS 138
T L F +FG VE+A V DR+TGRSRGFGFV T E +A K+
Sbjct: 16 TEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKA 62
Score = 42.0 bits (97), Expect(2) = 2e-10
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGG---GRGYGGGG 262
+ EF GRTIRV++A+ G R GRGG GRG+GGGG
Sbjct: 67 NNVEFDGRTIRVDKASDNGPRGGFGRGGGGFGRGFGGGG 105
[85][TOP]
>UniRef100_Q9SVM8 Glycine-rich RNA-binding protein 2, mitochondrial n=1
Tax=Arabidopsis thaliana RepID=GRP2_ARATH
Length = 158
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+ FG V DA V DRETGRSRGFGFV A +A
Sbjct: 51 LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATA 91
Score = 43.1 bits (100), Expect(2) = 2e-10
Identities = 26/51 (50%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEAT--PLGERPPGGRGGGRGYGGGGRGRGGDY 283
A +E DG E GR IRVN A P R GG GG G GGG G GG Y
Sbjct: 91 AAISEMDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSGGGGGYGGGGGGY 141
[86][TOP]
>UniRef100_B2YKT9 Glycine-rich RNA-binding protein n=1 Tax=Nicotiana tabacum
RepID=B2YKT9_TOBAC
Length = 157
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L + FS++G + D+ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQA 59
Score = 43.5 bits (101), Expect(2) = 2e-10
Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGG-------RGYGGGGRGRGG 277
+G + GR I VNEA G GGRGGG GYGGGGR GG
Sbjct: 68 NGQDLDGRNITVNEAQSRGSGGGGGRGGGGGGYGGGGGYGGGGRREGG 115
[87][TOP]
>UniRef100_B5DGC5 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B5DGC5_SALSA
Length = 154
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRG-YGGGGRGRGGDY 283
+G GRTIRVNEA G R GG GG RG GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEAGQGGGRGGGGGGGFRGSRGGGGYGGGGGY 110
Score = 43.5 bits (101), Expect(2) = 2e-10
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
DT L FSK+G + V DRETGR RGFGFV + A AK A
Sbjct: 15 DTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
[88][TOP]
>UniRef100_A9C1L1 RNP-1 like RNA-binding protein n=1 Tax=Delftia acidovorans SPH-1
RepID=A9C1L1_DELAS
Length = 124
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL FS+FGAV A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDSDLEQAFSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 22/37 (59%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 173 GRTIRVNEATPLGERPP--GGRGGGRGYGGGGRGRGG 277
GR + VNEA P+ R P GG GGG G GGGG G GG
Sbjct: 71 GRDLVVNEARPMEPRAPRSGGFGGGFGGGGGGGGFGG 107
[89][TOP]
>UniRef100_B9EP65 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B9EP65_SALSA
Length = 131
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRG-YGGGGRGRGGDY 283
+G GRTIRVNEA G R GG GG RG GGGG G GG Y
Sbjct: 67 NGQSLDGRTIRVNEAGQGGGRGGGGGGGFRGSRGGGGYGGGGGY 110
Score = 43.5 bits (101), Expect(2) = 2e-10
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
DT L FSK+G + V DRETGR RGFGFV + A AK A
Sbjct: 15 DTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
[90][TOP]
>UniRef100_Q7NHK5 RNA-binding protein n=1 Tax=Gloeobacter violaceus
RepID=Q7NHK5_GLOVI
Length = 123
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
DG + R IRVN+A P ER GG GGG GY GGG G GG
Sbjct: 62 DGATWDNRQIRVNKAEPRPER-SGGGGGGGGYRGGGAGGGG 101
Score = 43.1 bits (100), Expect(2) = 2e-10
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 16 DLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
D+T FS++G V+ + TDRETGR RGF FV +
Sbjct: 16 DITEAFSEYGTVKSVKIPTDRETGRPRGFAFVEM 49
[91][TOP]
>UniRef100_B3U4S4 RNA-binding protein n=1 Tax=Candidatus Nitrospira defluvii
RepID=B3U4S4_9BACT
Length = 107
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
L+NLFS G VE A V TD+ TG+SRGFGFV + A AK+A
Sbjct: 19 LSNLFSAHGTVESARVITDKFTGQSRGFGFVEMSTAEEAKAA 60
Score = 42.7 bits (99), Expect(2) = 2e-10
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+A T +G++ GR + VNEA P R GG GGGR GGG RGG
Sbjct: 58 KAAITALNGSDMDGRQLTVNEAKPQEARSGGGGGGGR--FGGGENRGG 103
[92][TOP]
>UniRef100_UPI000155BF8A PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus
anatinus RepID=UPI000155BF8A
Length = 270
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D DDL FS+FG VE A + D+++G+ RGFGFV +++ A V+ H +HG
Sbjct: 99 DVAEDDLVEHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIHG 156
Score = 35.8 bits (81), Expect(2) = 3e-10
Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 173 GRTIRVNEATPLGERPPGGRGG---GRGYGGGGRGRGG 277
G + V +A P + PGG GG GRG G GGRGRGG
Sbjct: 156 GHRVEVKKAVPKEDIHPGGGGGPRPGRG-GRGGRGRGG 192
[93][TOP]
>UniRef100_B4FFJ9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FFJ9_MAIZE
Length = 234
Score = 48.5 bits (114), Expect(2) = 3e-10
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L N F+ +G + D+ V TDRETGRSRGFGFVT +
Sbjct: 94 TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSS 133
Score = 39.7 bits (91), Expect(2) = 3e-10
Identities = 25/52 (48%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGG----GGRGRGGDY 283
+G E GR I VN+A G GG RGGG GYGG GG G GG Y
Sbjct: 145 NGKELDGRNITVNQAQSRGGGGGGGGYGGGRGGGGGYGGGRRDGGYGGGGGY 196
[94][TOP]
>UniRef100_A1BQW1 Glycine-rich RNA-binding protein (Fragment) n=1 Tax=Nicotiana
attenuata RepID=A1BQW1_9SOLA
Length = 152
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L + FS+FG + D+ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKA 59
Score = 42.4 bits (98), Expect(2) = 3e-10
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
G + GR I VNEA G GG GG RG GGGG G GG
Sbjct: 69 GQDLDGRNITVNEAQSRGSGGGGGGGGYRGGGGGGYGGGG 108
[95][TOP]
>UniRef100_B6TY06 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6TY06_MAIZE
Length = 142
Score = 48.5 bits (114), Expect(2) = 3e-10
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L N F+ +G + D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSS 58
Score = 39.7 bits (91), Expect(2) = 3e-10
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 10/53 (18%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGE----RPPGGRGGGRGYGG------GGRGRGGDY 283
+G E GR I VN+A G R GG GGG GYGG GG G GG Y
Sbjct: 70 NGKELDGRNITVNQAQSRGGGGGGRRDGGYGGGGGYGGRREGGGGGYGGGGGY 122
[96][TOP]
>UniRef100_A1VW19 RNP-1 like RNA-binding protein n=1 Tax=Polaromonas
naphthalenivorans CJ2 RepID=A1VW19_POLNA
Length = 148
Score = 44.7 bits (104), Expect(2) = 3e-10
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP----------GGRGGGRGYGGGGRGRGG 277
+G GR+I VNEA P+ RPP G R GG GYGGG R GG
Sbjct: 65 NGQPLGGRSITVNEARPMEARPPRTGGFGGGGGGDRSGGGGYGGGDRSGGG 115
Score = 43.5 bits (101), Expect(2) = 3e-10
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FG V A V +R+TGRS+GFGFV + +A A
Sbjct: 15 RDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQA 59
[97][TOP]
>UniRef100_B1X5L4 RNA-binding protein RbpD n=1 Tax=Paulinella chromatophora
RepID=B1X5L4_PAUCH
Length = 132
Score = 46.6 bits (109), Expect(2) = 3e-10
Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = +2
Query: 164 EFMGRTIRVNEATPL----GERPPGGRGGGRGYG-GGGRGRGGDY 283
E+MGR IRVN+A P G R GG GGG G G GGGRG GG Y
Sbjct: 66 EWMGRMIRVNKAEPRTGGGGNRGGGGGGGGGGGGYGGGRGGGGGY 110
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
D +DL LF+++G V + DRETGR RGF FV + A
Sbjct: 11 DAEQEDLQGLFAQYGDVSKVSLPLDRETGRKRGFAFVEMANEA 53
[98][TOP]
>UniRef100_A1WE84 RNP-1 like RNA-binding protein n=1 Tax=Verminephrobacter eiseniae
EF01-2 RepID=A1WE84_VEREI
Length = 122
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL FS++G+V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAQAQA 59
Score = 43.1 bits (100), Expect(2) = 3e-10
Identities = 23/41 (56%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGGRGRG 274
G F GR + VNEA P+ R P GG GGG G GGGG G G
Sbjct: 66 GQNFGGRDLVVNEARPMEPRAPRSGGFGGGAGGGGGGYGGG 106
[99][TOP]
>UniRef100_A7PDA4 Chromosome chr17 scaffold_12, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PDA4_VITVI
Length = 277
Score = 45.1 bits (105), Expect(2) = 4e-10
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
L F K+G V +A V DRETGRSRGFGFVT + A SA + +HG
Sbjct: 56 LREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHG 108
Score = 42.7 bits (99), Expect(2) = 4e-10
Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG-RGGDY 283
DG + GR +RVN AT GG GGG GYGGGG G GG Y
Sbjct: 102 DGQDLHGRRVRVNYATDRARS--GGFGGGGGYGGGGGGYGGGGY 143
[100][TOP]
>UniRef100_A7EC48 Glycine-rich RNA-binding protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7EC48_SCLS1
Length = 193
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
T D L FS+FG VE+A V DR+TGRSRGFGFV
Sbjct: 13 TDEDALRKKFSEFGNVEEAVVVKDRDTGRSRGFGFV 48
Score = 40.4 bits (93), Expect(2) = 4e-10
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATP-LGERPPGGRGGGRGYGGGGRGRGG 277
E + EF GRTIRV++A+ G GG GGG G G GG G GG
Sbjct: 68 EMNSVEFDGRTIRVDKASERSGNDRSGGGGGGFGGGRGGGGYGG 111
[101][TOP]
>UniRef100_Q7V9D6 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. MIT 9313
RepID=Q7V9D6_PROMM
Length = 199
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P GG GGG G GGGG G GG
Sbjct: 64 GAEMMGRPLRINKAEPRGSAPRRGGGYGGGGGGGGGGYGGGG 105
Score = 38.9 bits (89), Expect(2) = 4e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ FG V + + +R+TGR RGF FV + +A+ A
Sbjct: 15 EDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPA 57
[102][TOP]
>UniRef100_A5C101 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C101_VITVI
Length = 152
Score = 45.8 bits (107), Expect(2) = 4e-10
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T L + FS FG V +A V TDR+TGRSRGFGFV ++ + S+
Sbjct: 51 TDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASS 96
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 24/43 (55%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGR--GYGGGGRGRGG 277
DG E GR IRV+ A ER PG R GG G+GGG RG GG
Sbjct: 102 DGQELNGRNIRVSYAN---ERTPGPRSGGSGGGFGGGYRGNGG 141
[103][TOP]
>UniRef100_B7X2B4 RNP-1 like RNA-binding protein n=1 Tax=Comamonas testosteroni KF-1
RepID=B7X2B4_COMTE
Length = 132
Score = 45.8 bits (107), Expect(2) = 4e-10
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R DL + FS+FG V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDQDLQDSFSEFGTVNSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 26/56 (46%), Positives = 28/56 (50%), Gaps = 19/56 (33%)
Frame = +2
Query: 173 GRTIRVNEATPLGERPP----------------GGRGGGRGYG---GGGRGRGGDY 283
GR + VNEA P+ RPP GG GGGRG G GGGRG GG Y
Sbjct: 71 GRDLVVNEARPMEPRPPRSGGFGGGFGGGREGGGGFGGGRGDGGGFGGGRGDGGGY 126
[104][TOP]
>UniRef100_Q3E9N5 Putative uncharacterized protein At4g39260.4 n=1 Tax=Arabidopsis
thaliana RepID=Q3E9N5_ARATH
Length = 105
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T +DL FS+FG V D+ + DRE+GRSRGFGFVT + A
Sbjct: 17 TNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKA 59
Score = 39.7 bits (91), Expect(2) = 4e-10
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2
Query: 224 GGRGGGRGYGGGGRGRGGDY 283
GG GGGRGYGGGGR GG Y
Sbjct: 71 GGGGGGRGYGGGGRREGGGY 90
[105][TOP]
>UniRef100_Q6NYB0 Zgc:77366 n=1 Tax=Danio rerio RepID=Q6NYB0_DANRE
Length = 305
Score = 55.1 bits (131), Expect(2) = 5e-10
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D D L + FS+FGAVE A V TD+ETG+ RGFGFV E N + ++ H ++G
Sbjct: 111 DIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMING 168
Score = 32.3 bits (72), Expect(2) = 5e-10
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 173 GRTIRVNEATPLGE-RPPGGRGGGRGYGGGGRGRG 274
G + V +A E + G RGGGRG GGGRG G
Sbjct: 168 GHKVEVKKALTKQEMQAAGSRGGGRGGRGGGRGMG 202
[106][TOP]
>UniRef100_A5B074 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B074_VITVI
Length = 272
Score = 44.7 bits (104), Expect(2) = 5e-10
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
L F K+G V +A V DRETGRSRGFGFVT + A SA + +HG
Sbjct: 56 LREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHG 108
Score = 42.7 bits (99), Expect(2) = 5e-10
Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG-RGGDY 283
DG + GR +RVN AT GG GGG GYGGGG G GG Y
Sbjct: 102 DGQDLHGRRVRVNYATDRARS--GGFGGGGGYGGGGGGYGGGGY 143
[107][TOP]
>UniRef100_B8AP37 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AP37_ORYSI
Length = 139
Score = 45.1 bits (105), Expect(2) = 5e-10
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G E GR I VNEA R GG GGG GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQ---SRRSGGGGGGGGYGGGGGGYGG 107
Score = 42.4 bits (98), Expect(2) = 5e-10
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
FS +G + D+ + DRETGRSRGFGFVT +
Sbjct: 28 FSTYGEILDSKIINDRETGRSRGFGFVTFSS 58
[108][TOP]
>UniRef100_A8MRQ4 Uncharacterized protein At4g13850.4 n=1 Tax=Arabidopsis thaliana
RepID=A8MRQ4_ARATH
Length = 129
Score = 45.4 bits (106), Expect(2) = 5e-10
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+ FG V DA V DRETGRSRGFGFV A +A
Sbjct: 51 LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATA 91
Score = 42.0 bits (97), Expect(2) = 5e-10
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG 262
A +E DG E GR IRVN P +RP GG GGG G GGGG
Sbjct: 91 AAISEMDGKELNGRHIRVN---PANDRPSGGYGGG-GDGGGG 128
[109][TOP]
>UniRef100_Q6MN64 Putative RNA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
RepID=Q6MN64_BDEBA
Length = 116
Score = 45.8 bits (107), Expect(2) = 5e-10
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP-GGRGGGRGYGGGGRGRGGDY 283
+G E MGR + V+EA P+ R GG GGGRG GGGG RGG +
Sbjct: 65 NGVELMGRAMNVSEAKPMAPRENRGGFGGGRG-GGGGGNRGGGF 107
Score = 41.6 bits (96), Expect(2) = 5e-10
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEAN 126
L + F++FG VE A + DRETGRS+GF FV + +
Sbjct: 19 LADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTD 54
[110][TOP]
>UniRef100_Q44560 Putative RNA-binding protein rbpA n=3 Tax=Nostocaceae
RepID=RBPA_ANASP
Length = 102
Score = 44.3 bits (103), Expect(2) = 5e-10
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGER-PPGGRGGGRGYGGGGRGR 271
DG E+MGR ++VN+A P +R P GG GG G GGGGR R
Sbjct: 63 DGAEWMGRDLKVNKAKPREDRGPSGGNRGGYG-GGGGRNR 101
Score = 43.1 bits (100), Expect(2) = 5e-10
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
D L+ +F+++G V+ + TDRETG+ RGFGFV + + A ++A
Sbjct: 15 DTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAA 57
[111][TOP]
>UniRef100_B6T255 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B6T255_MAIZE
Length = 295
Score = 44.3 bits (103), Expect(2) = 6e-10
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + FS+FG V +A + DRE+GRSRGFGF+T + SA
Sbjct: 48 LKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASA 88
Score = 42.7 bits (99), Expect(2) = 6e-10
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG E GR IRVN A ER G GGG GGG G GG Y
Sbjct: 88 AAMTSMDGKELQGRNIRVNHAN---ERAGGIXGGGGFGSGGGYGXGGGY 133
[112][TOP]
>UniRef100_A6RXS7 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RXS7_BOTFB
Length = 197
Score = 46.2 bits (108), Expect(2) = 6e-10
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
T + L FS+FG VE+A V DR+TGRSRGFGFV
Sbjct: 13 TDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFV 48
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATP-LGERPPGGRGGGRGYGGGGRGRGG 277
E + EF GRTIRV++A+ G GG GGG G G GG G GG
Sbjct: 69 EMNSVEFDGRTIRVDKASERAGNDRSGGGGGGFGGGRGGGGYGG 112
[113][TOP]
>UniRef100_Q9FUD5 Glycine-rich RNA-binding protein n=1 Tax=Sorghum bicolor
RepID=Q9FUD5_SORBI
Length = 170
Score = 48.1 bits (113), Expect(2) = 6e-10
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L + F+ FG V D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSS 58
Score = 38.9 bits (89), Expect(2) = 6e-10
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG-----RGGDY 283
+G E GR I VN+A + GG GGG GYGGGG G GG Y
Sbjct: 70 NGKELDGRNITVNQA-----QSRGGGGGGGGYGGGGGGYGGRREGGGY 112
[114][TOP]
>UniRef100_Q9DED4 Cold-inducible RNA binding protein 2 n=1 Tax=Xenopus laevis
RepID=Q9DED4_XENLA
Length = 166
Score = 49.7 bits (117), Expect(2) = 6e-10
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT + L +FSK+G + + V DRET RSRGFGFVT E
Sbjct: 15 DTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFE 54
Score = 37.4 bits (85), Expect(2) = 6e-10
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEA-TPLGERPPGGRGG---GRGYGGGGRGRGG 277
+G GR IRV++A G+R G RGG GRG+ GGRGRGG
Sbjct: 67 NGKAVDGRQIRVDQAGKSSGDRRGGYRGGSSGGRGFFRGGRGRGG 111
[115][TOP]
>UniRef100_Q43472 Low temperature-responsive RNA-binding protein n=1 Tax=Hordeum
vulgare RepID=Q43472_HORVU
Length = 161
Score = 51.2 bits (121), Expect(2) = 6e-10
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L N FSK+G V D+ + TDRETGRSRGFGFVT ++ A
Sbjct: 17 TDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEA 59
Score = 35.8 bits (81), Expect(2) = 6e-10
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 13/54 (24%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-------------RGGGRGYGGGGRGRGG 277
+G + GR I VNEA GG GGG GYGGGG G GG
Sbjct: 68 NGQDLDGRNITVNEAQSRRSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGG 121
[116][TOP]
>UniRef100_Q40426 RNA-binding glycine-rich protein-1a n=1 Tax=Nicotiana sylvestris
RepID=Q40426_NICSY
Length = 156
Score = 45.4 bits (106), Expect(2) = 6e-10
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L FS+FG + D+ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKA 59
Score = 41.6 bits (96), Expect(2) = 6e-10
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGG-----GRGYGGGGRGRGG 277
+G + GR I VNEA G GG GG G GYGGGGR GG
Sbjct: 68 NGQDLDGRNITVNEAQSRGSGGGGGGGGYRGGSGGGYGGGGRREGG 113
[117][TOP]
>UniRef100_Q6MQW4 RNA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
RepID=Q6MQW4_BDEBA
Length = 120
Score = 44.7 bits (104), Expect(2) = 6e-10
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
F++FGAV+ A V DRETGRS+GFGFV + ++A
Sbjct: 23 FAQFGAVDSAKVIMDRETGRSKGFGFVEMSDDSA 56
Score = 42.4 bits (98), Expect(2) = 6e-10
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGD 280
+G E GR I ++EA P R G R GG G+GGG G GG+
Sbjct: 65 NGIELGGRPINISEARPQAPREGGPRRGGGGFGGGRGGGGGE 106
[118][TOP]
>UniRef100_UPI00004367E2 hypothetical protein LOC323529 n=1 Tax=Danio rerio
RepID=UPI00004367E2
Length = 305
Score = 54.3 bits (129), Expect(2) = 8e-10
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D D L + FS+FGAVE A V TD+ETG+ RGFGFV E N + ++ H ++G
Sbjct: 111 DIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHIING 168
Score = 32.3 bits (72), Expect(2) = 8e-10
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 173 GRTIRVNEATPLGE-RPPGGRGGGRGYGGGGRGRG 274
G + V +A E + G RGGGRG GGGRG G
Sbjct: 168 GHKVEVKKALTKQEMQAAGSRGGGRGGRGGGRGMG 202
[119][TOP]
>UniRef100_B9XL48 RNP-1 like RNA-binding protein n=1 Tax=bacterium Ellin514
RepID=B9XL48_9BACT
Length = 127
Score = 50.1 bits (118), Expect(2) = 8e-10
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGY-GGGGRGRGGDY 283
+A +GT+F GR + VNEA P ER GG GGG GY GGGG G GG Y
Sbjct: 58 QAAVQALNGTDFGGRPLTVNEARPREER--GGGGGGGGYRGGGGGGGGGGY 106
Score = 36.6 bits (83), Expect(2) = 8e-10
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
++L ++F++ G V + D+ +GR RGFGFVT+E A
Sbjct: 17 NELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQA 59
[120][TOP]
>UniRef100_B9XK70 RNP-1 like RNA-binding protein n=1 Tax=bacterium Ellin514
RepID=B9XK70_9BACT
Length = 114
Score = 45.8 bits (107), Expect(2) = 8e-10
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGG---RGYGGGGRGRGG 277
A +G ++ GR + VNEA P ER GG GGG GYGGG G GG
Sbjct: 58 AAVQNLNGKQWQGRALTVNEARPREERSGGGGGGGGSRGGYGGGSGGGGG 107
Score = 40.8 bits (94), Expect(2) = 8e-10
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
D +D+ +LF++ G V + + D+ TGR+RGFGFVT+ A
Sbjct: 12 DATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADA 58
[121][TOP]
>UniRef100_B5XBU9 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B5XBU9_SALSA
Length = 114
Score = 43.9 bits (102), Expect(2) = 8e-10
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G GRTIRVNEA G+ GGRGGG GY GG GRGG
Sbjct: 67 NGQSLDGRTIRVNEA---GQGGGGGRGGGGGYRSGG-GRGG 103
Score = 42.7 bits (99), Expect(2) = 8e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
DT L FSK+G + V DRETGR RGFGFV
Sbjct: 15 DTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFV 51
[122][TOP]
>UniRef100_Q7SGB3 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7SGB3_NEUCR
Length = 200
Score = 45.4 bits (106), Expect(2) = 1e-09
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFV 111
F +FGAVE+A V DR+TGRSRGFGFV
Sbjct: 22 FEEFGAVEEAVVVKDRDTGRSRGFGFV 48
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGG--RGYGGGGRGRGGDY 283
DG EF GR +RV++A+ +R GG GGG +G GGGG G G Y
Sbjct: 64 DGQEFDGRRVRVDKAS---DRAAGGGGGGFRQGGGGGGYGGRGGY 105
[123][TOP]
>UniRef100_P49311 Glycine-rich RNA-binding protein GRP2A n=1 Tax=Sinapis alba
RepID=GRP2_SINAL
Length = 169
Score = 44.7 bits (104), Expect(2) = 1e-09
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
L FS+FG + D+ + DRETGRSRGFGFVT +
Sbjct: 24 LETAFSQFGELVDSKIINDRETGRSRGFGFVTFK 57
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGE-RPPGGRGGGRGY-GGGGRGRGG 277
+G + GR+I VNEA G GGRGGG GY GGGG G GG
Sbjct: 70 NGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGG 112
[124][TOP]
>UniRef100_B6U1V8 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6U1V8_MAIZE
Length = 156
Score = 48.5 bits (114), Expect(2) = 1e-09
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L N F+ +G + D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSS 58
Score = 37.7 bits (86), Expect(2) = 1e-09
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGG-------GGRGRGGDY 283
+G E GR I VN+A G GG GGRG GG GG G GG Y
Sbjct: 70 NGKELDGRNITVNQAQSRGGGGGGGGRGGRGGGGYGGGRRDGGYGGGGGY 119
[125][TOP]
>UniRef100_C6KF85 Putative glycine-rich RNA-binding protein n=1 Tax=Tamarix hispida
RepID=C6KF85_9CARY
Length = 143
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L + FS FG V DA V TDRETGRSRGFGFV N A
Sbjct: 46 TDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEA 88
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
DG E GR+IRV+ A P G GG RG GG G G Y
Sbjct: 97 DGVELNGRSIRVSFAQERSSGPRPGGGGFRGNDGGFGGPSGGY 139
[126][TOP]
>UniRef100_B4FQ70 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FQ70_MAIZE
Length = 140
Score = 48.5 bits (114), Expect(2) = 1e-09
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L N F+ +G + D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSS 58
Score = 37.7 bits (86), Expect(2) = 1e-09
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G E GR I VN+A + GG GGG GY GGGRG GG
Sbjct: 70 NGKELDGRNITVNQA-----QSRGGGGGGGGY-GGGRGGGG 104
[127][TOP]
>UniRef100_B2IT35 RNP-1 like RNA-binding protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IT35_NOSP7
Length = 100
Score = 49.3 bits (116), Expect(2) = 1e-09
Identities = 20/47 (42%), Positives = 36/47 (76%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+ + +DL ++F+++G V++ + DRETGR RGFGFV +E++A ++A
Sbjct: 11 EVKEEDLRHVFAEYGTVKNVQLPIDRETGRMRGFGFVEMESDAQETA 57
Score = 37.0 bits (84), Expect(2) = 1e-09
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGR 271
D E+MGR+++VN+A P + GG GGR G GG R
Sbjct: 63 DNAEWMGRSLKVNKAKP---KTDGGSSGGRRGGDGGSSR 98
[128][TOP]
>UniRef100_Q7VEJ9 RNA-binding protein, RRM domain n=1 Tax=Prochlorococcus marinus
RepID=Q7VEJ9_PROMA
Length = 252
Score = 46.6 bits (109), Expect(2) = 1e-09
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGR---GRGGDY 283
G E MGR +R+N+A P G GG G G GYGGGGR G GG Y
Sbjct: 64 GAELMGRPLRINKAEPRG---GGGGGRGGGYGGGGRGGYGGGGGY 105
Score = 39.3 bits (90), Expect(2) = 1e-09
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ +G V + + +R+TGR RGF F+ + AA++A
Sbjct: 15 EDVIQLFAPYGEVANCSLPLERDTGRKRGFAFIEMADEAAEAA 57
[129][TOP]
>UniRef100_C0H8U7 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=C0H8U7_SALSA
Length = 193
Score = 43.9 bits (102), Expect(2) = 1e-09
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
DT + L F+K+G + V D+ETGRSRGFGFV + A AK A
Sbjct: 15 DTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-------GGRGYG-----GGGRGRGG 277
+G GRTIRV+EA G R GG G GG GYG GGGRGRGG
Sbjct: 67 NGKSVDGRTIRVDEAGKGGGRSGGGGGGGFRGSRGGGGYGGGGGYGGGRGRGG 119
[130][TOP]
>UniRef100_Q2VCI6 Putative glycine-rich RNA binding protein-like n=1 Tax=Solanum
tuberosum RepID=Q2VCI6_SOLTU
Length = 178
Score = 45.1 bits (105), Expect(2) = 1e-09
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T + L+ FS++G V ++ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQA 59
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 23/44 (52%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGR-GRGGDY 283
+G + GR I VNEA G GG GG GYGGG R G GG Y
Sbjct: 68 NGQDLDGRNITVNEAQSRGGGGGGGGRGGGGYGGGRREGGGGGY 111
[131][TOP]
>UniRef100_B6VA25 Putative glycine-rich RNA-binding protein n=1 Tax=Chorispora
bungeana RepID=B6VA25_CHOBU
Length = 175
Score = 44.7 bits (104), Expect(2) = 1e-09
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
D RA L FS++G V D+ + DRETGRSRGFGFVT +
Sbjct: 20 DDRA--LETAFSQYGDVVDSKIINDRETGRSRGFGFVTFK 57
Score = 41.2 bits (95), Expect(2) = 1e-09
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG--RGRGGDY 283
+G + GR+I VNEA G GG GGGRG GGGG G GG Y
Sbjct: 70 NGQDLDGRSITVNEAQSRGS---GGGGGGRGGGGGGYRSGGGGGY 111
[132][TOP]
>UniRef100_Q40052 Glycine rich protein, RNA binding protein n=1 Tax=Hordeum vulgare
RepID=Q40052_HORVU
Length = 173
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 16 DLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
+L FS++G + DA + DRETGRSRGFGFVT
Sbjct: 21 NLQAAFSQYGEILDAKIINDRETGRSRGFGFVT 53
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEATPLGERPPGG------RGGGRGYGGGG--RGRGGDY 283
R E +G E GR + VNEA GG RGGG GYGGGG G+GG Y
Sbjct: 61 RQAIEEMNGKELDGRQVTVNEAQSRRSAGGGGGGYGGQRGGGGGYGGGGGYGGQGGGY 118
[133][TOP]
>UniRef100_B5X3A3 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B5X3A3_SALSA
Length = 167
Score = 48.9 bits (115), Expect(2) = 1e-09
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT L ++FSK+G + + V DRET RSRGFGFVT E
Sbjct: 15 DTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFE 54
Score = 37.0 bits (84), Expect(2) = 1e-09
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGG--RGYGGGGRGRGGDY 283
+G GR IRV++A G+ GGR GG RG GGRG GG Y
Sbjct: 67 NGKSLDGRQIRVDQA---GKSGGGGRSGGGFRGGSSGGRGGGGGY 108
[134][TOP]
>UniRef100_O04070 SGRP-1 protein n=1 Tax=Solanum commersonii RepID=O04070_SOLCO
Length = 162
Score = 45.1 bits (105), Expect(2) = 1e-09
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
L++ FS +G V D+ + DRETGRSRGFGFVT +
Sbjct: 23 LSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFK 56
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----------RGGGRGYGGGGRGRGG 277
+G+E GR I VNEA G GG GGG GYGGGG RGG
Sbjct: 69 NGSELDGRNITVNEAQARGSGGGGGGGGGFGGGRRREGGGGGYGGGGGYRGG 120
[135][TOP]
>UniRef100_O24106 RNA-binding protein n=1 Tax=Nicotiana glutinosa RepID=O24106_NICGU
Length = 156
Score = 44.7 bits (104), Expect(2) = 1e-09
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L + FS++G + D+ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQA 59
Score = 41.2 bits (95), Expect(2) = 1e-09
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGR------GGGRGYGGGGRGRGG 277
+G + GR I VNEA G GG GGG GYGGGGR GG
Sbjct: 68 NGQDLDGRNITVNEAQSRGSGGGGGGYRGGRGGGGGGYGGGGRREGG 114
[136][TOP]
>UniRef100_Q02AB7 RNP-1 like RNA-binding protein n=1 Tax=Candidatus Solibacter
usitatus Ellin6076 RepID=Q02AB7_SOLUE
Length = 132
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
+ + +LF ++G V A + TDRETGRSRGF FV +E
Sbjct: 16 EGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEME 51
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERP-PGGRGGGRGYGGGGRG 268
+G GR + VNEA P +R GG GGGRG+GGGG G
Sbjct: 64 NGYTLDGRALNVNEARPKPDRGFGGGGGGGRGFGGGGGG 102
[137][TOP]
>UniRef100_Q21QN2 RNA-binding region RNP-1 n=1 Tax=Rhodoferax ferrireducens T118
RepID=Q21QN2_RHOFD
Length = 140
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G ++ GR + VNEA P+ RPP GGG G G GG G GG
Sbjct: 65 NGQQYGGRGLVVNEARPMEARPPRTGGGGFGGGAGGGGYGG 105
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F+ G V A V +R+TGRS+GFGFV + ++A A
Sbjct: 15 RDEDLQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQA 59
[138][TOP]
>UniRef100_B8N8I7 Heterogeneous nuclear ribonucleoprotein G, putative n=2
Tax=Aspergillus RepID=B8N8I7_ASPFN
Length = 125
Score = 51.6 bits (122), Expect(2) = 1e-09
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+T + L FS+FG V DA V DRETGRSRGFGFVT A A
Sbjct: 14 NTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 23/44 (52%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGR---GGGRGYG---GGGRGRGG 277
E GR IRVN A RP GG GGG GYG GGG +GG
Sbjct: 69 ELDGRRIRVNLANA---RPAGGSRNYGGGNGYGGGYGGGYSQGG 109
[139][TOP]
>UniRef100_Q46I49 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46I49_PROMT
Length = 250
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
G E MGR +R+N+A P G P R GG GYGGGG+G G
Sbjct: 64 GAELMGRPLRINKAEPRGSAP---RRGGGGYGGGGQGGYG 100
Score = 39.7 bits (91), Expect(2) = 2e-09
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LFS FG V + + +R+TGR RGF FV + A +++
Sbjct: 15 EDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEAS 57
[140][TOP]
>UniRef100_A2BTV1 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BTV1_PROM5
Length = 222
Score = 49.3 bits (116), Expect(2) = 2e-09
Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPL---GERPPGGRGGGRGYGGGGRGRG 274
GTE MGR +R+N+A P G+R GG G G GYGGGG G G
Sbjct: 64 GTELMGRPLRINKAEPRGGGGQRRGGGGGRGGGYGGGGNGGG 105
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKS 138
+D+ LF+ +G V + + +R+TGR RGF FV + A ++
Sbjct: 15 EDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALET 56
[141][TOP]
>UniRef100_C1BJ24 Cold-inducible RNA-binding protein n=1 Tax=Osmerus mordax
RepID=C1BJ24_OSMMO
Length = 172
Score = 47.8 bits (112), Expect(2) = 2e-09
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT L ++FSK+G + + V DRET RSRGFGFVT +
Sbjct: 15 DTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFD 54
Score = 37.7 bits (86), Expect(2) = 2e-09
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
+G GR IRV++A G G GG RG GGRG GG Y
Sbjct: 67 NGKSLDGRQIRVDQAGKSGGGGRSGGGGFRGGSSGGRGGGGGY 109
[142][TOP]
>UniRef100_Q7ZYU7 Cirbp-prov protein n=1 Tax=Xenopus laevis RepID=Q7ZYU7_XENLA
Length = 166
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
+T D L F+K+G + + V DRET RSRGFGFVT E
Sbjct: 15 ETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFE 54
Score = 38.9 bits (89), Expect(2) = 2e-09
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEA-TPLGERPPGGRGG---GRGYGGGGRGRGG 277
+G GR IRV++A GER G RGG GRG+ GGRGRGG
Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERRGGYRGGSSGGRGFFRGGRGRGG 111
[143][TOP]
>UniRef100_Q0IE69 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Synechococcus sp. CC9311 RepID=Q0IE69_SYNS3
Length = 181
Score = 45.1 bits (105), Expect(2) = 2e-09
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERP--PGGRGGGRGYGGGGRGR-----GGDY 283
G E MGR +R+N+A P G P G GGG YGGGG G GG+Y
Sbjct: 64 GAELMGRPLRINKAEPRGSAPRRDFGGGGGGNYGGGGGGNYGGGGGGNY 112
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LFS +G V + + +R+TGR RGF FV + AA+++
Sbjct: 15 EDIIELFSTYGEVTNCALPLERDTGRKRGFAFVEMSDEAAEAS 57
[144][TOP]
>UniRef100_A9P8Z7 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9P8Z7_POPTR
Length = 165
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L FS++G + D+ + DRETGRSRGFGFVT A
Sbjct: 18 TTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKA 60
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGGDY 283
+G + GR I VNEA G GG RGGG GYGG G GG Y
Sbjct: 69 NGQDLDGRNITVNEAQSRGSGGGGGGGGYSRGGGGGYGGRREGGGGGY 116
[145][TOP]
>UniRef100_O93235 Cold-inducible RNA-binding protein n=1 Tax=Xenopus laevis
RepID=CIRBP_XENLA
Length = 163
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
+T D L F+K+G + + V DRET RSRGFGFVT E
Sbjct: 15 ETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFE 54
Score = 38.9 bits (89), Expect(2) = 2e-09
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEA-TPLGERPPGGRGG---GRGYGGGGRGRGG 277
+G GR IRV++A GER G RGG GRG+ GGRGRGG
Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERRGGYRGGSSGGRGFFRGGRGRGG 111
[146][TOP]
>UniRef100_B7X2B3 RNP-1 like RNA-binding protein n=1 Tax=Comamonas testosteroni KF-1
RepID=B7X2B3_COMTE
Length = 158
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
R +DL F +FGAV A V +R+TGRS+GFGFV + + A A
Sbjct: 15 RDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQA 59
Score = 39.7 bits (91), Expect(2) = 2e-09
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 14/57 (24%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--GGRGGG----RGYG--------GGGRGRGGDY 283
+G GR++ VNEA P+ RPP GG GGG G+G GGGR GG Y
Sbjct: 65 NGQPLGGRSLVVNEARPMEPRPPRTGGYGGGFRSEGGFGGGNRDGGYGGGRNEGGGY 121
[147][TOP]
>UniRef100_B0D8X8 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D8X8_LACBS
Length = 154
Score = 49.3 bits (116), Expect(2) = 2e-09
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAA 132
+T D L FS+FG V D+ V DR+TGRSRGFGFVT EA+AA
Sbjct: 13 NTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAA 60
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 22/39 (56%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGY-GGGGRGRGG 277
E GR I+VN A G GG GGG GY GGGG G GG
Sbjct: 68 ELDGRRIKVNLANARG----GGGGGGGGYSGGGGGGYGG 102
[148][TOP]
>UniRef100_Q40427 RNA-binding glycine-rich protein-1b n=1 Tax=Nicotiana sylvestris
RepID=Q40427_NICSY
Length = 148
Score = 42.7 bits (99), Expect(2) = 2e-09
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
L + F +G V D+ + DRETGRSRGFGFVT +
Sbjct: 22 LADAFGTYGEVLDSKIINDRETGRSRGFGFVTFK 55
Score = 42.7 bits (99), Expect(2) = 2e-09
Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-------RGGGRGYGGGGRGRGG 277
+G E GR+I VNEA G GG GGG GYGGGG G GG
Sbjct: 68 NGQELDGRSITVNEAQARGSGGGGGGYGGGRREGGGGGYGGGGGGYGG 115
[149][TOP]
>UniRef100_B5IMT7 RNA-binding protein RbpD n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMT7_9CHRO
Length = 105
Score = 43.1 bits (100), Expect(2) = 2e-09
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL--EANAAKS 138
D DD+ +LFS++G V + DR+TGR RGF FV + EA+ K+
Sbjct: 11 DAEVDDVQHLFSEYGDVRKCTLPLDRDTGRKRGFAFVEMANEADETKA 58
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPL----GERPPGGRGGGRGYGGGG 262
+ E+MGR IRVN+A P G R G GGG GYGGGG
Sbjct: 61 DLQNVEWMGRNIRVNKAEPRTGGGGGRQFAGAGGGGGYGGGG 102
[150][TOP]
>UniRef100_A0YNN3 RNA-binding region n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YNN3_9CYAN
Length = 100
Score = 47.8 bits (112), Expect(2) = 2e-09
Identities = 19/43 (44%), Positives = 33/43 (76%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
DDL ++F+ +G+V+ + TDRETGRSRGF FV ++ ++ +++
Sbjct: 15 DDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETS 57
Score = 37.7 bits (86), Expect(2) = 2e-09
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATP---LGERPPGGRGGGRGYGG 256
E DG E+MGR ++VN+A P G GGR GGR GG
Sbjct: 61 ELDGAEWMGRDLKVNKAKPRENSGSFGGGGRRGGRSGGG 99
[151][TOP]
>UniRef100_P70807 RNA-binding protein n=1 Tax=Anabaena variabilis RepID=P70807_ANAVA
Length = 102
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGER--PPGGRGGGRGYGGGGR 265
DG E+MGR ++VN+A P +R GGRGG G GGGGR
Sbjct: 63 DGAEWMGRDLKVNKAKPKEDRGSSGGGRGGYSGGGGGGR 101
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+DL +F+++G V+ V DRETGR RGF FV + +A + A
Sbjct: 15 NDLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVEMGTDAEEDA 57
[152][TOP]
>UniRef100_C4J159 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J159_MAIZE
Length = 261
Score = 43.1 bits (100), Expect(2) = 2e-09
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGF+T ++ SA
Sbjct: 47 LRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASA 87
Score = 42.0 bits (97), Expect(2) = 2e-09
Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPL--GERPPGGRGGGRGYGGGGRG-RGGDY 283
A T DG GR IRVN A G R GG GGG GYGGGG G GG Y
Sbjct: 87 AAITAMDGKTLDGRNIRVNHANERTGGFRSSGGYGGG-GYGGGGGGYGGGGY 137
[153][TOP]
>UniRef100_C6TK08 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TK08_SOYBN
Length = 243
Score = 43.5 bits (101), Expect(2) = 2e-09
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACY*VRRHRVHG 174
L F+++G V D V DRETGRSRGFGFVT + A SA + +HG
Sbjct: 56 LRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHG 108
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
DG + GR IRVN AT RP G GG G GGGG GG+Y
Sbjct: 102 DGQDLHGRRIRVNYATE-RSRPGFGGDGGYGSGGGGYNGGGNY 143
[154][TOP]
>UniRef100_A9PIG6 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PIG6_POPTR
Length = 241
Score = 43.5 bits (101), Expect(2) = 2e-09
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT-LEANAAKSACY*VRRHRVHG 174
T + L F K+G V +A + DR+TGRSRGFGFVT + A SA + +HG
Sbjct: 51 TDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHG 108
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 15/58 (25%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP---------------GGRGGGRGYGGGGRGRGGDY 283
DG + GR +RVN AT ERP GG GGG G GGGG G GG Y
Sbjct: 102 DGQDLHGRRVRVNYAT---ERPQRTFNNNYGNYGGGGYGGGGGGYGGGGGGYGTGGGY 156
[155][TOP]
>UniRef100_A4RME1 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4RME1_MAGGR
Length = 182
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV--TLEANAAKS 138
T L F ++G VE+A V DR+TGRSRGFGFV T E +A K+
Sbjct: 14 TEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKA 60
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
T + EF GRTIRV++A+ G RGGG G+ GG GRGG
Sbjct: 62 TAMNNVEFDGRTIRVDKASDTGP-----RGGGGGFRGGYGGRGG 100
[156][TOP]
>UniRef100_P49310 Glycine-rich RNA-binding protein GRP1A n=1 Tax=Sinapis alba
RepID=GRP1_SINAL
Length = 166
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
D RA L FS++G V D+ + DRETGRSRGFGFVT +
Sbjct: 20 DDRA--LETAFSQYGEVLDSKIINDRETGRSRGFGFVTFK 57
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G + GR+I VNEA G GG GGGRG GGG R GG
Sbjct: 70 NGQDLDGRSITVNEAQSRGS---GGGGGGRGGGGGYRSGGG 107
[157][TOP]
>UniRef100_Q9U5Y7 Glycine rich RNA binding protein n=1 Tax=Ciona intestinalis
RepID=Q9U5Y7_CIOIN
Length = 162
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAA 132
DDL FS G VE+ + DRETGRSRGF FVT EAN A
Sbjct: 18 DDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDA 61
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2
Query: 161 TEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
++ GR + V +A + GGRGGG GYGGGG G GG Y
Sbjct: 68 SDVRGRNVSVRQAQSKRDGGGGGRGGG-GYGGGGYGGGGGY 107
[158][TOP]
>UniRef100_B6SP74 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6SP74_MAIZE
Length = 156
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/46 (54%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-----GGRGYGGGGRGRGG 277
+G E GR I VNEA G R GG G GG GYGGGGR GG
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRGGGGYGGGGRRDGG 115
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[159][TOP]
>UniRef100_O93465 RNA-binding protein AxRNBP n=1 Tax=Ambystoma mexicanum
RepID=O93465_AMBME
Length = 144
Score = 49.3 bits (116), Expect(2) = 2e-09
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
D+ L + FSK+G V DA V DRETGRSRGFGFVT
Sbjct: 17 DSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVT 54
Score = 35.8 bits (81), Expect(2) = 2e-09
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGD 280
+G GR IRV+ A G+ GGRGGG G GG G GGD
Sbjct: 69 NGESLDGRQIRVDLA---GKSSGGGRGGGGGGYRGGSGGGGD 107
[160][TOP]
>UniRef100_B6STA5 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6STA5_MAIZE
Length = 155
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/46 (54%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-----GGRGYGGGGRGRGG 277
+G E GR I VNEA G R GG G GG GYGGGGR GG
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRGGGGYGGGGRRDGG 115
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[161][TOP]
>UniRef100_B6GW69 Pc06g01290 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6GW69_PENCW
Length = 140
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAAKSA 141
+T + L F +FG VEDA V DR+TGRSRGFGFV EA AA +A
Sbjct: 12 NTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMNA 62
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGD 280
EF GR IRV++AT ER G GGGRG GGG RGG+
Sbjct: 67 EFDGRQIRVDKAT---ERAAG--GGGRGGFGGGGFRGGN 100
[162][TOP]
>UniRef100_C4J6D2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J6D2_MAIZE
Length = 149
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/46 (54%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-----GGRGYGGGGRGRGG 277
+G E GR I VNEA G R GG G GG GYGGGGR GG
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRGGGGYGGGGRRDGG 115
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[163][TOP]
>UniRef100_B8A3G8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A3G8_MAIZE
Length = 144
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/44 (56%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-RGGGRGYGGGGRGRGGDY 283
+G E GR I VNEA G R GG GGGR GGGG G GG Y
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGYGGGGRRDGGGGYGGGGGY 113
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[164][TOP]
>UniRef100_C0HED8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0HED8_MAIZE
Length = 120
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-GGRGYGGGGRGRG 274
+G E GR I VNEA G R GG G GG GYGGG RG G
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGGYGGGNRGGG 110
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[165][TOP]
>UniRef100_Q9SP10 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Medicago sativa
RepID=Q9SP10_MEDSA
Length = 105
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T D L FS++G + D+ + DRETGRSRGFGFVT
Sbjct: 17 TDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVT 53
Score = 39.3 bits (90), Expect(2) = 2e-09
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG 268
+G + GR I VN+A G GG GG GYGGGG G
Sbjct: 68 NGQDLDGRNITVNQAQSRGSGGGGGGRGGGGYGGGGGG 105
[166][TOP]
>UniRef100_C4XL28 RNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1
RepID=C4XL28_DESMR
Length = 99
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
DD+ N F+ +G V + TDRETGR RGFGFV ++ A +A
Sbjct: 17 DDVRNHFASYGEVLSVNLITDRETGRLRGFGFVEMDDAGAAAA 59
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERP-PGGRGGGRGYGGGGR 265
DG E GRT++VNEA E+P GG GGGRG GGGR
Sbjct: 64 DGKELGGRTLKVNEAQ---EKPRSGGGGGGRGGYGGGR 98
[167][TOP]
>UniRef100_C5YNX7 Putative uncharacterized protein Sb08g015580 n=1 Tax=Sorghum
bicolor RepID=C5YNX7_SORBI
Length = 250
Score = 43.5 bits (101), Expect(2) = 3e-09
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGFVT ++ SA
Sbjct: 46 LRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASA 86
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPL--GERPPGGRG-------------GGRGYGGGGRGR 271
A T DG GR+IRVN A G R GG G GG GYGGGG G
Sbjct: 86 AAITAMDGKTLDGRSIRVNHANERTGGFRGSGGGGYGGGGFGGGGYGGGGGGYGGGGGGY 145
Query: 272 GGDY 283
GG Y
Sbjct: 146 GGGY 149
[168][TOP]
>UniRef100_Q6YNS1 Putative glycine-rich RNA-binding protein n=1 Tax=Prunus avium
RepID=Q6YNS1_PRUAV
Length = 178
Score = 44.7 bits (104), Expect(2) = 3e-09
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T D L FS FG + ++ + DRETGRSRGFGFVT A
Sbjct: 19 TDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKA 61
Score = 40.0 bits (92), Expect(2) = 3e-09
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGG---RGYGGGGRGRGGDY 283
+G GR I VNEA G GG GG RG GGGG G GG Y
Sbjct: 70 NGQNLDGRNITVNEAQSRGSGGGGGGNGGGYSRGGGGGGYGGGGGY 115
[169][TOP]
>UniRef100_A9PIZ6 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PIZ6_9ROSI
Length = 171
Score = 43.5 bits (101), Expect(2) = 3e-09
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L FS++G + D+ + DRETGRSRGFGFVT
Sbjct: 23 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVT 54
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG------GGRGYGGGGRGRGG 277
+G + GR I VNEA G GG G GG GYGGGGR GG
Sbjct: 69 NGQDLDGRNITVNEAQSRGSGGGGGGGGYNRNSGGGGYGGGGRREGG 115
[170][TOP]
>UniRef100_B5IMX1 RNA-binding protein RbpD n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMX1_9CHRO
Length = 119
Score = 43.1 bits (100), Expect(2) = 3e-09
Identities = 25/48 (52%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Frame = +2
Query: 164 EFMGRTIRVNEATP----------LGERPPGGRGGGRGYGGGGRGRGG 277
E+MGR IRVN+ATP G GG GGG G GGGG G GG
Sbjct: 66 EWMGRMIRVNKATPREGGGGNRGGYGGGNRGGGGGGYGGGGGGGGGGG 113
Score = 41.6 bits (96), Expect(2) = 3e-09
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
+DL +LF ++G V + DRETGR RGF FV L +A
Sbjct: 15 EDLLDLFGQYGEVRQCSLPLDRETGRKRGFAFVELANDA 53
[171][TOP]
>UniRef100_UPI0001A2D182 heterogeneous nuclear ribonucleoprotein A0 n=1 Tax=Danio rerio
RepID=UPI0001A2D182
Length = 326
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D DLT FS+FG +E + V TD++TG+ RGFGFV E N + ++ H ++G
Sbjct: 121 DIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMING 178
Score = 31.6 bits (70), Expect(2) = 4e-09
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 209 GERPPGGRGGGRGYG----GGGRGRGGDY 283
G R GRGGGRG G G G GRGG Y
Sbjct: 197 GARGGRGRGGGRGMGRNQNGFGGGRGGGY 225
[172][TOP]
>UniRef100_Q6NYW8 Heterogeneous nuclear ribonucleoprotein A0 n=1 Tax=Danio rerio
RepID=Q6NYW8_DANRE
Length = 314
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D DLT FS+FG +E + V TD++TG+ RGFGFV E N + ++ H ++G
Sbjct: 109 DIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMING 166
Score = 31.6 bits (70), Expect(2) = 4e-09
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 209 GERPPGGRGGGRGYG----GGGRGRGGDY 283
G R GRGGGRG G G G GRGG Y
Sbjct: 185 GARGGRGRGGGRGMGRNQNGFGGGRGGGY 213
[173][TOP]
>UniRef100_Q6PHJ4 Hnrpa0 protein (Fragment) n=1 Tax=Danio rerio RepID=Q6PHJ4_DANRE
Length = 303
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D DLT FS+FG +E + V TD++TG+ RGFGFV E N + ++ H ++G
Sbjct: 121 DIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMING 178
Score = 31.6 bits (70), Expect(2) = 4e-09
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 209 GERPPGGRGGGRGYG----GGGRGRGGDY 283
G R GRGGGRG G G G GRGG Y
Sbjct: 197 GARGGRGRGGGRGMGRNQNGFGGGRGGGY 225
[174][TOP]
>UniRef100_B6TR84 Glycine-rich RNA-binding protein 7 n=1 Tax=Zea mays
RepID=B6TR84_MAIZE
Length = 253
Score = 43.1 bits (100), Expect(2) = 4e-09
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+K+G V +A + DRE+GRSRGFGF+T ++ SA
Sbjct: 50 LRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASA 90
Score = 41.2 bits (95), Expect(2) = 4e-09
Identities = 25/51 (49%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPL--GERPPGGRGGGRGYGGGGRGRGGDY 283
A T DG GR IRVN A G R GG GG GYGGG G G Y
Sbjct: 90 AAITAMDGKTLDGRNIRVNHANERTGGFRSSGGGYGGGGYGGGYGGGSGGY 140
[175][TOP]
>UniRef100_A9P8S6 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9P8S6_POPTR
Length = 170
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L FS++G + D+ + DRETGRSRGFGFVT
Sbjct: 23 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVT 54
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-------GGRGYGGGGRGRGG 277
+G + GR I VNEA G GG G GG GYGGGGR GG
Sbjct: 69 NGQDLDGRNITVNEAQSRGSGGGGGGGGGYNRNSGGGGYGGGGRREGG 116
[176][TOP]
>UniRef100_B5KLZ7 Putative glycine-rich RNA-binding protein 2 n=1 Tax=Bambusa
oldhamii RepID=B5KLZ7_BAMOL
Length = 162
Score = 43.1 bits (100), Expect(2) = 4e-09
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSA 141
T L + F+ FG V +A V TDR+TG+SRGFGFV+ + AK+A
Sbjct: 48 TDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNA 94
Score = 41.2 bits (95), Expect(2) = 4e-09
Identities = 26/46 (56%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGRGYGGGGRG-RGGDY 283
DG E GR I VN A ERP G RG GG YGGGG G GG Y
Sbjct: 99 DGQELEGRNIHVNFAN---ERPAGNRGFSGGGSYGGGGGGAYGGGY 141
[177][TOP]
>UniRef100_A3ZRX9 RNA-binding protein n=1 Tax=Blastopirellula marina DSM 3645
RepID=A3ZRX9_9PLAN
Length = 149
Score = 47.0 bits (110), Expect(2) = 4e-09
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 10 ADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEAN 126
+ +L NLF ++G V A V DRETGRSRGFGFV + ++
Sbjct: 16 SSELENLFGQYGQVASASVINDRETGRSRGFGFVEMASD 54
Score = 37.4 bits (85), Expect(2) = 4e-09
Identities = 26/50 (52%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 143 ATEC-DGTEFMGRTIRVNEATPLGERPPGGRGGGR--GYGGGGRGRGGDY 283
ATE +G + GR + VNEA ER GG GGG G GGGGR GG Y
Sbjct: 60 ATEALNGFDVDGRKLVVNEARER-ERSGGGGGGGGYGGGGGGGRSGGGGY 108
[178][TOP]
>UniRef100_A9RSY7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RSY7_PHYPA
Length = 161
Score = 46.6 bits (109), Expect(2) = 4e-09
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
G E GR I VN A P G G RGGG G GGGG G+GG
Sbjct: 70 GKELDGRPITVNRAKPKGRDGGGDRGGGGGGGGGGGGKGG 109
Score = 37.7 bits (86), Expect(2) = 4e-09
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
+T L F +FG V +A V D+ETG SRGFGFV
Sbjct: 17 NTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFV 53
[179][TOP]
>UniRef100_B5XF66 Cold-inducible RNA-binding protein n=1 Tax=Salmo salar
RepID=B5XF66_SALSA
Length = 146
Score = 44.3 bits (103), Expect(2) = 4e-09
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT L FSK+G + V DRET RSRGFGFVT E
Sbjct: 15 DTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFE 54
Score = 40.0 bits (92), Expect(2) = 4e-09
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G GR IRV+EA G R G GG R YGGG R GG
Sbjct: 67 NGKSVDGRMIRVDEAGKSGGRSDRGGGGDRSYGGGYRSGGG 107
[180][TOP]
>UniRef100_B9HRM9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HRM9_POPTR
Length = 128
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L FS++G + D+ + DRETGRSRGFGFVT
Sbjct: 22 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVT 53
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-------GGRGYGGGGRGRGG 277
+G + GR I VNEA G GG G GG GYGGGGR GG
Sbjct: 68 NGQDLDGRNITVNEAQSRGSGGGGGGGGGYNRNSGGGGYGGGGRREGG 115
[181][TOP]
>UniRef100_B4DCN2 RNP-1 like RNA-binding protein n=1 Tax=Chthoniobacter flavus
Ellin428 RepID=B4DCN2_9BACT
Length = 126
Score = 44.7 bits (104), Expect(2) = 4e-09
Identities = 23/42 (54%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGG--RGYGGGGRGRGG 277
G GR + VNEA P ER GG GGG R +GGGG G GG
Sbjct: 66 GKTLQGRPLTVNEARPREERSGGGGGGGGRRSFGGGGGGGGG 107
Score = 39.7 bits (91), Expect(2) = 4e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL 117
DT DL + F++ G V++ + D+ TGRSRGF FVT+
Sbjct: 13 DTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFVTM 51
[182][TOP]
>UniRef100_C0YJU8 Probable RNA-binding protein n=1 Tax=Chryseobacterium gleum ATCC
35910 RepID=C0YJU8_9FLAO
Length = 116
Score = 50.1 bits (118), Expect(2) = 4e-09
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
T+ +L +LF++FG V A + TDRETGRSRGFGFV + + K A
Sbjct: 12 TKEYELHDLFAEFGDVSSAKIVTDRETGRSRGFGFVEMGDDEGKQA 57
Score = 34.3 bits (77), Expect(2) = 4e-09
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 9/47 (19%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERP--------PGGRGGGRGYGGG-GRGRGG 277
EF G+T+ V+EA P E+P GG G GGG G RGG
Sbjct: 65 EFNGKTLNVSEAKPREEKPRRSFDNNRSGGYGNNNNRGGGYGNNRGG 111
[183][TOP]
>UniRef100_Q01PH3 RNP-1 like RNA-binding protein n=1 Tax=Candidatus Solibacter
usitatus Ellin6076 RepID=Q01PH3_SOLUE
Length = 116
Score = 44.3 bits (103), Expect(2) = 4e-09
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG---RGRGG 277
+G E GR + +NEA P +P GG GGGRG+GGGG R GG
Sbjct: 64 NGHELDGRALNINEARP---KPQGGGGGGRGFGGGGGGGRPGGG 104
Score = 40.0 bits (92), Expect(2) = 4e-09
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
+ +LF +G+V+ + TDR+TGRSRGF FV + +A A A + H + G
Sbjct: 18 IRSLFEPYGSVDRVNLVTDRDTGRSRGFAFVEMTDAAEADRAIAALNGHELDG 70
[184][TOP]
>UniRef100_A5KRV2 RNP-1 like RNA-binding protein n=1 Tax=candidate division TM7
genomosp. GTL1 RepID=A5KRV2_9BACT
Length = 108
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T D L F++ G VE+A V TDR++GRS+GFGFVT
Sbjct: 14 TTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVT 50
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERP-PGGRGGGRGYGGGGRGR 271
E D +E GR I VNEA P ERP GG G G GGGG R
Sbjct: 63 ELDNSELDGRNIHVNEARPREERPRNGGFNGNGGSGGGGSFR 104
[185][TOP]
>UniRef100_UPI000023DBC7 hypothetical protein FG03841.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023DBC7
Length = 1163
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
+T D L N F +G + D+ V DR+TGRSRGFGFVT
Sbjct: 13 NTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVT 50
Score = 37.0 bits (84), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
E GR I+VN L PGG GGG GY GGG GG
Sbjct: 68 ELDGRRIKVN----LANARPGGGGGGGGYSGGGGYMGG 101
[186][TOP]
>UniRef100_Q8VXC4 Glycine rich RNA binding protein n=1 Tax=Oryza sativa
RepID=Q8VXC4_ORYSA
Length = 194
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS +G + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGG 277
+G E GR I VNEA GG RGGG GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGYGGGG 115
[187][TOP]
>UniRef100_B6TDT8 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6TDT8_MAIZE
Length = 203
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 127 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 173
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 81 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 118
[188][TOP]
>UniRef100_Q8LPB1 Glycine-rich RNA-binding protein n=1 Tax=Physcomitrella patens
RepID=Q8LPB1_PHYPA
Length = 178
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 22/37 (59%), Positives = 22/37 (59%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T L F FG V V TDRETGRSRGFGFVT
Sbjct: 16 TTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVT 52
Score = 41.2 bits (95), Expect(2) = 5e-09
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATPLGERPPGG--------RGGGRGYGGGGRGRGG 277
+ +G E GR I VN+A G GG +GGG GYGGGG G GG
Sbjct: 65 DMNGKELDGRNITVNQAQSRGGGSGGGGGGGYNNRQGGGGGYGGGGYGGGG 115
[189][TOP]
>UniRef100_B2WDB7 Putative uncharacterized protein n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WDB7_PYRTR
Length = 168
Score = 45.4 bits (106), Expect(2) = 5e-09
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFV----TLEANAAKSA 141
L F +FG VE+A V DR+TGRSRGFGFV EA+AA A
Sbjct: 18 LRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQA 62
Score = 38.5 bits (88), Expect(2) = 5e-09
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
EF GR IRV++A+ +R GG G GYGGGG G G Y
Sbjct: 67 EFDGRRIRVDKAS---DRAGGGAPRGGGYGGGGGGYRGGY 103
[190][TOP]
>UniRef100_Q9PTX2 BFCIRP n=1 Tax=Rana catesbeiana RepID=Q9PTX2_RANCA
Length = 164
Score = 47.8 bits (112), Expect(2) = 5e-09
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
DT L +FSK+G +++ V DRET RSRGFGFVT E
Sbjct: 16 DTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFE 55
Score = 36.2 bits (82), Expect(2) = 5e-09
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGG 277
+G GR IRV++A GG GGGRG+ GGRGRGG
Sbjct: 68 NGKTVDGRQIRVDQAGKSSNDRRGGYRGGSSGGGRGFFRGGRGRGG 113
[191][TOP]
>UniRef100_A7P909 Chromosome chr3 scaffold_8, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P909_VITVI
Length = 162
Score = 43.9 bits (102), Expect(2) = 5e-09
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T L FS+FG + ++ + DRETGRSRGFGFVT +
Sbjct: 19 TDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSS 58
Score = 40.0 bits (92), Expect(2) = 5e-09
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-------GGRGYGGGGRGRGG 277
+G GR I VNEA G GG G GG GYGGGGR GG
Sbjct: 70 NGQNLDGRNITVNEAQSRGSGGGGGGGGGGGGYRGGGGYGGGGRREGG 117
[192][TOP]
>UniRef100_O22385 Glycine-rich protein n=1 Tax=Oryza sativa RepID=O22385_ORYSA
Length = 161
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS +G + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGG 277
+G E GR I VNEA GG RGGG GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGYGGGG 115
[193][TOP]
>UniRef100_B7SDF0 Glycine-rich RNA binding protein n=1 Tax=Oryza sativa Japonica
Group RepID=B7SDF0_ORYSJ
Length = 161
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS +G + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGG 277
+G E GR I VNEA GG RGGG GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGYGGGG 115
[194][TOP]
>UniRef100_A2ZN20 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZN20_ORYSI
Length = 161
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS +G + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 42.0 bits (97), Expect(2) = 5e-09
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-----RGGGRGYGGGGRGRGG 277
+G E GR I VNEA GG RGGG GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGYGGGG 115
[195][TOP]
>UniRef100_Q8S2Y6 Glycine-rich RNA binding protein (Fragment) n=3 Tax=Zea mays
RepID=Q8S2Y6_MAIZE
Length = 156
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 80 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 126
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 34 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 71
[196][TOP]
>UniRef100_Q41810 Glycine-rich protein n=1 Tax=Zea mays RepID=Q41810_MAIZE
Length = 155
Score = 43.9 bits (102), Expect(2) = 5e-09
Identities = 25/46 (54%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG-----GGRGYGGGGRGRGG 277
+G E GR I VNEA G R GG G GG GYGGGGR GG
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRGGGGYGGGGRRDGG 115
Score = 40.0 bits (92), Expect(2) = 5e-09
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L N FS +G V ++ + DRET RSRGFGFVT
Sbjct: 24 LHNAFSTYGEVLESKIILDRETQRSRGFGFVT 55
[197][TOP]
>UniRef100_Q8S2Y8 Glycine-rich RNA binding protein (Fragment) n=7 Tax=Zea mays
RepID=Q8S2Y8_MAIZE
Length = 155
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 80 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 126
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 34 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 71
[198][TOP]
>UniRef100_Q8S2Y3 Glycine-rich RNA binding protein (Fragment) n=2 Tax=Zea mays
RepID=Q8S2Y3_MAIZE
Length = 155
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 125
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 33 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 70
[199][TOP]
>UniRef100_Q8S2X5 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2X5_MAIZE
Length = 155
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 125
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 28 TDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
[200][TOP]
>UniRef100_Q8S2Y7 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2Y7_MAIZE
Length = 139
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 64 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 110
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 18 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 55
[201][TOP]
>UniRef100_B4FFS8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FFS8_MAIZE
Length = 133
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 116
Score = 41.6 bits (96), Expect(2) = 5e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 61
[202][TOP]
>UniRef100_B6IZU1 Glycine-rich RNA-binding protein n=1 Tax=Coxiella burnetii
CbuG_Q212 RepID=B6IZU1_COXB2
Length = 121
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
D AD+L + F ++G +E+A + DRETGRS+GF F+T
Sbjct: 28 DVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFIT 65
Score = 37.0 bits (84), Expect(2) = 5e-09
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATP-LGERPPGGRGGGRGYGGGGRG 268
++ +G + GR IRVN A G+R G GGRG GGGRG
Sbjct: 77 SKANGIDLQGRKIRVNIARENTGDRRRDGGSGGRGGRGGGRG 118
[203][TOP]
>UniRef100_A9KFP0 Glycine-rich RNA-binding protein n=2 Tax=Coxiella burnetii
RepID=A9KFP0_COXBN
Length = 112
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
D AD+L + F ++G +E+A + DRETGRS+GF F+T
Sbjct: 19 DVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFIT 56
Score = 37.0 bits (84), Expect(2) = 5e-09
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATP-LGERPPGGRGGGRGYGGGGRG 268
++ +G + GR IRVN A G+R G GGRG GGGRG
Sbjct: 68 SKANGIDLQGRKIRVNIARENTGDRRRDGGSGGRGGRGGGRG 109
[204][TOP]
>UniRef100_A9F411 RNA-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9F411_SORC5
Length = 107
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATPLGERPPGG-RGGGRGYGGGGRGRGG 277
++ +G GR+++VNEA ERP GG GGGRG+GGGG GRGG
Sbjct: 62 SQLNGMMLDGRSLKVNEAQ---ERPAGGGGGGGRGFGGGG-GRGG 102
Score = 39.3 bits (90), Expect(2) = 5e-09
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAAKS 138
+T + L F+ G V + + TDRETG+ RGF FVT+ EAN+A S
Sbjct: 13 NTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFVTMGSAQEANSAIS 62
[205][TOP]
>UniRef100_Q46349 RNA-binding protein n=1 Tax=Chlorogloeopsis sp. RepID=Q46349_9CYAN
Length = 99
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
D L +F+++G+V+ + TDRETGR RGFGFV + +A ++A
Sbjct: 15 DSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMGTDAEEAA 57
Score = 39.3 bits (90), Expect(2) = 5e-09
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRG-YGGGGR 265
DG E+MGR ++VN+A P +R G GGGRG YGG R
Sbjct: 63 DGAEWMGRDLKVNKAKPKEDR--GSFGGGRGSYGGRNR 98
[206][TOP]
>UniRef100_UPI0000E4A98D PREDICTED: similar to stage-specific activator protein n=2
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A98D
Length = 453
Score = 52.8 bits (125), Expect(2) = 6e-09
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
DDL LF +FG VED + TD ETG+ RGFGFVTL++
Sbjct: 121 DDLYELFKQFGMVEDVHIMTDNETGKHRGFGFVTLDS 157
Score = 30.8 bits (68), Expect(2) = 6e-09
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERP---PGGRGGGRGY----GGGGRGRGG 277
E G+++ + +A P R PGG GG GY GGGG +GG
Sbjct: 171 ELKGKSMEIKKAQPKMNRGFGGPGGPMGGGGYQQGGGGGGFNQGG 215
[207][TOP]
>UniRef100_Q9CX86 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q9CX86_MOUSE
Length = 305
Score = 48.1 bits (113), Expect(2) = 6e-09
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACY*VRRHRVHG 174
D DL FS+FGAVE A + D+++G+ RGFGFV +++ A V+ H + G
Sbjct: 108 DVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQG 165
Score = 35.4 bits (80), Expect(2) = 6e-09
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 224 GGRGGGRGYGGGGRGRGGD 280
GGRGGGRG GGGG G G D
Sbjct: 191 GGRGGGRGRGGGGGGGGRD 209
[208][TOP]
>UniRef100_Q7V3Q7 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V3Q7_PROMP
Length = 221
Score = 47.0 bits (110), Expect(2) = 7e-09
Identities = 25/42 (59%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPL--GERPPGGRGGGR-GYGGGGRGRG 274
GTE MGR +R+N+A P G P G GGGR GYGGGG G G
Sbjct: 85 GTELMGRPLRINKAEPRGGGGGPRRGGGGGRGGYGGGGNGGG 126
Score = 36.6 bits (83), Expect(2) = 7e-09
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ +G V + + +R+TGR RGF FV + A +++
Sbjct: 36 EDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALETS 78
[209][TOP]
>UniRef100_Q99070 Glycine-rich RNA-binding protein 2 n=1 Tax=Sorghum bicolor
RepID=GRP2_SORBI
Length = 168
Score = 47.8 bits (112), Expect(2) = 7e-09
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L F+ FG V D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSS 58
Score = 35.8 bits (81), Expect(2) = 7e-09
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG-----------RGGDY 283
+G E GR I VN+A + GG GGG GYGGGG G GG Y
Sbjct: 70 NGKELDGRNITVNQA-----QSRGGGGGGGGYGGGGGGYGGREGGGYGGGGGGY 118
[210][TOP]
>UniRef100_O48567 Glycine-rich RNA-binding protein n=1 Tax=Euphorbia esula
RepID=O48567_EUPES
Length = 164
Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T L FS +G + D+ + DRETGRSRGFGFVT
Sbjct: 18 TTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVT 54
Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 23/44 (52%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGG------RGGGRGYGGGGRGRGG 277
E GR I VNEA G GG GGG GYGGGGR GG
Sbjct: 72 ELDGRNITVNEAQSRGSGGGGGGGGYSRGGGGGGYGGGGRREGG 115
[211][TOP]
>UniRef100_Q3EBX0 Putative uncharacterized protein At2g21660.2 n=1 Tax=Arabidopsis
thaliana RepID=Q3EBX0_ARATH
Length = 159
Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
D RA L F+++G V D+ + DRETGRSRGFGFVT + A
Sbjct: 20 DDRA--LETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61
Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG--RGRGGDY 283
+G + GR+I VNEA G GG GG YGGGG R GG Y
Sbjct: 70 NGQDLDGRSITVNEAQSRGSGGGGGHRGGGSYGGGGGRREGGGGY 114
[212][TOP]
>UniRef100_P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein n=2
Tax=Zea mays RepID=GRPA_MAIZE
Length = 157
Score = 48.5 bits (114), Expect(2) = 7e-09
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
T + L N F+ +G + D+ V TDRETGRSRGFGFVT +
Sbjct: 19 TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSS 58
Score = 35.0 bits (79), Expect(2) = 7e-09
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 19/62 (30%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGE-------------------RPPGGRGGGRGYGGGGRGRGG 277
+G E GR I VN+A G R GG GGG GYGG G GG
Sbjct: 70 NGKELDGRNITVNQAQSRGGGGGGGGYGGGRGGGGYGGGRRDGGYGGGGGYGGRREGGGG 129
Query: 278 DY 283
Y
Sbjct: 130 GY 131
[213][TOP]
>UniRef100_Q10FE5 Retrotransposon protein, putative, Ty1-copia subclass, expressed
n=1 Tax=Oryza sativa Japonica Group RepID=Q10FE5_ORYSJ
Length = 153
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
FS +G + D+ + DRETGRSRGFGFVT +
Sbjct: 28 FSTYGEILDSKIINDRETGRSRGFGFVTFSS 58
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 23/41 (56%), Positives = 24/41 (58%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G E GR I VNEA R GG GGG G GGGG G GG
Sbjct: 70 NGKELDGRNITVNEAQ---SRRSGGGGGGYGGGGGGYGGGG 107
[214][TOP]
>UniRef100_Q8RUC2 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8RUC2_MAIZE
Length = 155
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 125
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 33 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
[215][TOP]
>UniRef100_Q8S2Y5 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2Y5_MAIZE
Length = 154
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYRGGRRDGGGYGGGGGGYGG 125
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 33 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 70
[216][TOP]
>UniRef100_Q8S2X6 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2X6_MAIZE
Length = 154
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 125
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 33 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDA 70
[217][TOP]
>UniRef100_Q8S2Y0 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2Y0_MAIZE
Length = 153
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 77 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 123
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
L N FS +G V ++ + DRET RSRGFGFVT +A +SA
Sbjct: 31 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSA 72
[218][TOP]
>UniRef100_Q8S2Y4 Glycine-rich RNA binding protein (Fragment) n=1 Tax=Zea mays
RepID=Q8S2Y4_MAIZE
Length = 148
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 73 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 119
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 27 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXA 64
[219][TOP]
>UniRef100_Q1XG61 Putative glycine-rich RNA binding protein n=1 Tax=Cryptomeria
japonica RepID=Q1XG61_CRYJA
Length = 181
Score = 45.1 bits (105), Expect(2) = 8e-09
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L + F+ FG V D+ V +DRETGRSRGFGFVT
Sbjct: 24 LKDAFTAFGEVMDSKVVSDRETGRSRGFGFVT 55
Score = 38.1 bits (87), Expect(2) = 8e-09
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
+G + GR I VN A G GG GGG GY GGG G GG
Sbjct: 70 NGRDLDGRNITVNRAQARGGGGGGGGGGG-GYRGGGGGSGG 109
[220][TOP]
>UniRef100_A9NML8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NML8_PICSI
Length = 172
Score = 43.1 bits (100), Expect(2) = 9e-09
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L + FS FG + ++ + +DRETGRSRGFGFVT
Sbjct: 25 LQDAFSPFGEILESKIISDRETGRSRGFGFVT 56
Score = 40.0 bits (92), Expect(2) = 9e-09
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY-GGGGRGRGG 277
+G GR I VN A G GG GGGRG+ GGGG G GG
Sbjct: 71 NGKVLDGRNITVNPAQSRGNGGGGGGGGGRGFRGGGGGGYGG 112
[221][TOP]
>UniRef100_Q8S2X7 Glycine-rich RNA binding protein (Fragment) n=2 Tax=Zea mays
RepID=Q8S2X7_MAIZE
Length = 154
Score = 42.4 bits (98), Expect(2) = 9e-09
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRG--GGR----GYGGGGRGRGG 277
+G E GR I VNEA G R GG G GGR GYGGGG G GG
Sbjct: 79 NGKELDGRNITVNEAQSRGGRGGGGGGYGGGRRDGGGYGGGGGGYGG 125
Score = 40.8 bits (94), Expect(2) = 9e-09
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
L N FS +G V ++ + DRET RSRGFGFVT
Sbjct: 33 LNNAFSTYGEVLESKIILDRETQRSRGFGFVT 64
[222][TOP]
>UniRef100_A0YX79 RNA-binding region protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YX79_9CYAN
Length = 101
Score = 44.7 bits (104), Expect(2) = 9e-09
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+DL ++F+++G V+ + TDRETGR RGF FV ++ + + A
Sbjct: 15 EDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDA 57
Score = 38.5 bits (88), Expect(2) = 9e-09
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRG 247
DG E+MGR ++VN+A P +R G GGGRG
Sbjct: 63 DGAEWMGRDLKVNKARPREKRSSFGGGGGRG 93
[223][TOP]
>UniRef100_A9RTT7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RTT7_PHYPA
Length = 455
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +2
Query: 143 ATECDGTEFMGRTIRVNEATPLGERPPGGRGGGR-GYGGGGRGRGG 277
ATE DG+++ GR++ VNEA+ G PGGRGGGR G+GG G GRGG
Sbjct: 359 ATEMDGSDYNGRSLVVNEASSGG--TPGGRGGGRGGFGGRGGGRGG 402
Score = 28.9 bits (63), Expect(2) = 1e-08
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
D+ LT FS G V + + TDRE+G +G+ V A++
Sbjct: 293 DSIRSGLTEFFSDCGEVLNVRIPTDRESGEIKGYVTVPCAASS 335
[224][TOP]
>UniRef100_A9B9L1 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. MIT 9211
RepID=A9B9L1_PROM4
Length = 245
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLG------ERPPGGRGGGRGYGGGGR-GRGGDY 283
G E MGR +R+N+A P G GG G G GYGGGG+ G GG Y
Sbjct: 64 GAELMGRPLRINKAEPRGGGGGPRRGGYGGGGYGGGYGGGGQGGYGGGY 112
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+D+ LF+ FG V + + +R+TGR RGF F+ + AA+S+
Sbjct: 15 EDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESS 57
[225][TOP]
>UniRef100_A9NZ72 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NZ72_PICSI
Length = 221
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L F+++G V +A + DRETGRSRGFGF++ +N +A
Sbjct: 56 LRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAA 96
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG 262
A T DG + GR + VN AT ER G R GG GYGGGG
Sbjct: 96 AAITGMDGKDLHGRLVHVNYAT---ERTGGFRSGGGGYGGGG 134
[226][TOP]
>UniRef100_Q9DFG5 Cold-inducible RNA binding protein XCIRP-1 n=1 Tax=Xenopus laevis
RepID=Q9DFG5_XENLA
Length = 166
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE 120
+T L F+K+G + + V DRET RSRGFGFVT E
Sbjct: 15 ETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFE 54
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEA-TPLGERPPGGRGG---GRGYGGGGRGRGG 277
+G GR IRV++A GER G RGG GRG+ GGRGRGG
Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERRGGYRGGSSGGRGFFRGGRGRGG 111
[227][TOP]
>UniRef100_O24184 Glycine-rich RNA-binding protein n=1 Tax=Oryza sativa
RepID=O24184_ORYSA
Length = 165
Score = 42.0 bits (97), Expect(2) = 1e-08
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS +G + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATP----------LGERPPGGRGGGRGYGGGGRGRG 274
G E GR I VNEA G+R GG GGRGYGGGG G G
Sbjct: 71 GKELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGRGYGGGGGGGG 119
[228][TOP]
>UniRef100_Q2QLR2 Os12g0632000 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QLR2_ORYSJ
Length = 162
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS FG + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTFGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 39.7 bits (91), Expect(2) = 1e-08
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY--GGGGRGRGGDY 283
+G E GR I VNEA R GG GGG G GGGG G GG Y
Sbjct: 70 NGKELDGRNITVNEAQ--SRRSGGGGGGGYGQRGGGGGYGGGGGY 112
[229][TOP]
>UniRef100_Q9M699 Putative glycine-rich RNA-binding protein 2 n=1 Tax=Catharanthus
roseus RepID=Q9M699_CATRO
Length = 160
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVT 114
T L+ FS++G V ++ V DRETGRSRGFGFVT
Sbjct: 19 TTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVT 55
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGG--------GRGYGGGGRGRGG 277
+G GR I VNEA G GG GG G GYGGGGR GG
Sbjct: 70 NGQTLDGRNITVNEAQSRGSGGGGGGGGFRGPRREGGGGYGGGGRRDGG 118
[230][TOP]
>UniRef100_O24187 OsGRP1 n=1 Tax=Oryza sativa RepID=O24187_ORYSA
Length = 160
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 31 FSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
FS FG + ++ + DRETGRSRGFGFVT + A
Sbjct: 28 FSTFGEILESKIINDRETGRSRGFGFVTFSSEQA 61
Score = 39.7 bits (91), Expect(2) = 1e-08
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGY--GGGGRGRGGDY 283
+G E GR I VNEA R GG GGG G GGGG G GG Y
Sbjct: 70 NGKELDGRNITVNEAQ--SRRSGGGGGGGYGQRGGGGGYGGGGGY 112
[231][TOP]
>UniRef100_Q9XY11 Cold-inducible RNA-binding protein n=1 Tax=Ciona intestinalis
RepID=Q9XY11_CIOIN
Length = 158
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL----EANAA 132
DDL FS G VE+ + DRETGRSRGF FVT EAN A
Sbjct: 18 DDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDA 61
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 161 TEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
++ GR + V +A + GGRGGG GYGGGG G GG
Sbjct: 68 SDVAGRNVSVRQAQSKRDGGGGGRGGG-GYGGGGYGGGG 105
[232][TOP]
>UniRef100_Q3HVL3 RNA binding protein-like protein n=1 Tax=Solanum tuberosum
RepID=Q3HVL3_SOLTU
Length = 150
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACY*VRRHRVHG 174
T L F+ FG V DA V DR++GRSRGFGFV + + AK A + ++HG
Sbjct: 50 TDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHG 107
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
DG + GR IRVN A R G GGG GGGG G GG Y
Sbjct: 101 DGQQLHGRNIRVNLAQERAPRSDGYGGGG---GGGGGGYGGGY 140
[233][TOP]
>UniRef100_UPI000023F4FE hypothetical protein FG11064.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F4FE
Length = 127
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
+T + L FS+FG V D+ + DR+TGR+RGFGFVT +A
Sbjct: 12 NTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATA 58
Score = 36.2 bits (82), Expect(2) = 1e-08
Identities = 23/41 (56%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGG---RGRGG 277
E GR IRVN A RP GG GGG G G GG GRGG
Sbjct: 67 ELDGRRIRVNVANA---RPAGGNGGGFGGGRGGGYGGGRGG 104
[234][TOP]
>UniRef100_B4AUV7 RNP-1 like RNA-binding protein n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AUV7_9CHRO
Length = 116
Score = 41.6 bits (96), Expect(2) = 1e-08
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKS 138
DD+ +F ++G V+ + DRE+GR RGF FV L+++A ++
Sbjct: 15 DDIKEVFGEYGTVKQVKLPIDRESGRVRGFAFVDLDSDAEET 56
Score = 41.2 bits (95), Expect(2) = 1e-08
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPP--GGRGGGRGYGGGGRGRGG 277
DG E+MGR ++V++A P ++ P GG GY GGG RGG
Sbjct: 63 DGAEWMGRELKVSKARPRQDKRPSSGGSFNKGGYSGGGGSRGG 105
[235][TOP]
>UniRef100_Q5EUF5 Putative uncharacterized protein (Fragment) n=1 Tax=Prosthecobacter
dejongeii RepID=Q5EUF5_9BACT
Length = 111
Score = 45.1 bits (105), Expect(2) = 1e-08
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 146 TECDGTEFMGRTIRVNEATPLGERPP----GGRGGGRGYGGGGRG 268
T +G +F GR++ +NEA P +RP G RGG GYGGGG G
Sbjct: 64 TALNGKDFGGRSLTINEARPKEDRPAYSGGGSRGGKGGYGGGGGG 108
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 16 DLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
+L LF+ +G V D + D TGR RGF FVT+++ A
Sbjct: 20 ELRALFNDYGTVTDMHLPMDHATGRPRGFAFVTMDSAMA 58
[236][TOP]
>UniRef100_B9RLN6 Glycine-rich RNA-binding protein, putative n=1 Tax=Ricinus communis
RepID=B9RLN6_RICCO
Length = 267
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVT-LEANAAKSACY*VRRHRVHG 174
L F K+G V +A V DRETGRSRGF FVT + A SA + +HG
Sbjct: 56 LREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHG 108
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
DG + GR +RVN A +RP GGG GYGGGG G GG
Sbjct: 102 DGQDLHGRRVRVNYA---NDRPRTSFGGG-GYGGGGYGAGG 138
[237][TOP]
>UniRef100_B2ALT3 Predicted CDS Pa_1_13615 n=1 Tax=Podospora anserina
RepID=B2ALT3_PODAN
Length = 176
Score = 44.7 bits (104), Expect(2) = 1e-08
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFV 111
T L F +FG VE+A V DR+TGRSRGFGFV
Sbjct: 13 TEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFV 48
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +2
Query: 164 EFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG 268
EF GR IRV++A+ G R GGRGG G+G GG G
Sbjct: 67 EFDGRQIRVDKASDTGPRG-GGRGGPPGFGRGGYG 100
[238][TOP]
>UniRef100_Q8RW11 Putative glycine rich protein n=1 Tax=Rumex obtusifolius
RepID=Q8RW11_RUMOB
Length = 168
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L FS +G V ++ + DRETGRSRGFGFVT + A
Sbjct: 18 TDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQA 60
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 19/60 (31%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-------------------RGGGRGYGGGGRGRGG 277
+G + GR I VNEA G GG RGGG GYGGGG G GG
Sbjct: 69 NGQDLDGRNITVNEAQSRGSGGGGGGYRGGGGGGYGGRREGGYNRGGGGGYGGGGGGYGG 128
[239][TOP]
>UniRef100_C5YSY6 Putative uncharacterized protein Sb08g022740 n=1 Tax=Sorghum
bicolor RepID=C5YSY6_SORBI
Length = 165
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
+G E GR I VNEA G R G GGG GY GGGRG GG Y
Sbjct: 70 NGKELDGRNITVNEAQSRGGR---GGGGGGGY-GGGRGGGGGY 108
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T + L + FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 19 TDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEA 61
[240][TOP]
>UniRef100_P93486 Glycine-rich RNA-binding protein n=1 Tax=Pisum sativum
RepID=P93486_PEA
Length = 146
Score = 42.7 bits (99), Expect(2) = 1e-08
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + F+ +G V +A V TDR+TGRSRGFGFV ++ + ++
Sbjct: 52 LKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATS 92
Score = 39.7 bits (91), Expect(2) = 1e-08
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGG------GRGRGG 277
DG + GR IRV+ A +RP RGGG GYGGG RG GG
Sbjct: 98 DGQDLNGRNIRVSYAN---DRPSAPRGGGGGYGGGYGDGFSNRGGGG 141
[241][TOP]
>UniRef100_C6T3N5 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T3N5_SOYBN
Length = 138
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 141
L + FS FG V DA V TDR++GRSRGFGFV + + S+
Sbjct: 52 LKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASS 92
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRG 274
DG + GR+IRV+ A P G GGG GY GG G G
Sbjct: 98 DGKDLDGRSIRVSYANDRPSGPQSGGGGGGGYRSGGFGGG 137
[242][TOP]
>UniRef100_Q25C92 Glycine-rich RNA-binding protein n=1 Tax=Lolium perenne
RepID=Q25C92_LOLPR
Length = 107
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEAN 126
T L FS+FG + D + DRETGRSRGFGFVT ++
Sbjct: 16 TNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSS 56
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
+G + GR I VNEA + GG GGG GGGG GG++
Sbjct: 67 NGQDLDGRNITVNEA----QSRSGGGGGGYSRGGGGGDSGGNW 105
[243][TOP]
>UniRef100_Q10VQ9 RNA-binding region RNP-1 n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10VQ9_TRIEI
Length = 102
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA 123
D DDL+ +F+++G V+ + TDRETGR RGFGFV + +
Sbjct: 11 DVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSS 51
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGG-RGGGRGYGGGGR 265
DG E+MGR I+VN+A P +R GG R Y GG+
Sbjct: 63 DGAEWMGRDIKVNKAKPREDRGSGGNRRNSPNYSRGGK 100
[244][TOP]
>UniRef100_C1V3H1 RRM domain-containing RNA-binding protein n=1 Tax=Haliangium
ochraceum DSM 14365 RepID=C1V3H1_9DELT
Length = 92
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2
Query: 137 APATECDGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGG 277
A E DG E GR IRVNEA R GG GGG GY GGG G GG
Sbjct: 26 AAIEEMDGVELDGRNIRVNEAQE-RSRGGGGGGGGGGYRGGGGGGGG 71
Score = 34.7 bits (78), Expect(2) = 1e-08
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 70 TDRETGRSRGFGFVTLEANAAKSA 141
TDR+TGRSRGFGFVT + +A
Sbjct: 3 TDRDTGRSRGFGFVTFAESGQAAA 26
[245][TOP]
>UniRef100_A6DDX9 Putative uncharacterized protein n=1 Tax=Caminibacter
mediatlanticus TB-2 RepID=A6DDX9_9PROT
Length = 83
Score = 50.8 bits (120), Expect(2) = 1e-08
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 1 DTRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANA 129
D A++L LFS++G V A + DRETGRS+GFGF+ +E+ A
Sbjct: 12 DANAEELKELFSQYGEVLSAKIINDRETGRSKGFGFIEMESGA 54
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 149 ECDGTEFMGRTIRVNEATP 205
E DG EF+GR +RVNEA P
Sbjct: 60 ELDGKEFLGRRLRVNEARP 78
[246][TOP]
>UniRef100_A9V6Q9 Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9V6Q9_MONBE
Length = 423
Score = 43.9 bits (102), Expect(2) = 2e-08
Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRG---RGG 277
G GR + ++ ATP RP GGRGG RG GGGRG RGG
Sbjct: 380 GVSIAGREVFLDFATPRAPRPEGGRGGFRGGRGGGRGGSFRGG 422
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 7 RADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSA 141
RAD+ +++ FG + + TDRETG S+GFG+V E ++AK+A
Sbjct: 330 RADE-NSVWEIFGDAKSVRIVTDRETGNSKGFGYVEFEDVDSAKTA 374
[247][TOP]
>UniRef100_B7Q3Q4 Transformer-2 protein C, putative (Fragment) n=1 Tax=Ixodes
scapularis RepID=B7Q3Q4_IXOSC
Length = 258
Score = 47.0 bits (110), Expect(2) = 2e-08
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLE----ANAAKSAC 144
T+ DL +FSK+G +ED V D ++GRSRGF FV E A AAK C
Sbjct: 116 TQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFSFVYFENVEDAKAAKDRC 166
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Frame = +2
Query: 134 RAPATECDGTEFMGRTIRVNEA--------TP---LGERPPGGRGGGRGYGGGGRGRGG 277
+A C+G E GR IRV+ + TP +G +P G G G G GGGGR GG
Sbjct: 160 KAAKDRCNGLEIDGRKIRVDYSITQRAHTPTPGIYMG-KPSYGGGYGEGSGGGGRSGGG 217
[248][TOP]
>UniRef100_A3PA60 RNA-binding region RNP-1 (RNA recognition motif) n=1
Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PA60_PROM0
Length = 217
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 158 GTEFMGRTIRVNEATPLGE--RPPGGRGGGRGYGGGGRGRGG 277
GTE MGR +R+N+A P G GGRGGG G G G G GG
Sbjct: 64 GTELMGRPLRINKAEPRGSGGSRRGGRGGGYGGGNSGGGYGG 105
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 13 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAAKS 138
+D LF+ FG V + + +R+TGR RGF F+ + A +S
Sbjct: 15 EDAIQLFAPFGEVLNCSLPLERDTGRKRGFAFIEMADEAIES 56
[249][TOP]
>UniRef100_Q41453 Putative glycine rich RNA binding protein n=1 Tax=Solanum tuberosum
RepID=Q41453_SOLTU
Length = 175
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 4 TRADDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
T L++ FS++ V ++ + DRETGRSRGFGFVT + A
Sbjct: 17 TTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQA 59
Score = 39.3 bits (90), Expect(2) = 2e-08
Identities = 22/38 (57%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 173 GRTIRVNEATPLGERPPGGRGGGRGYGGGGR-GRGGDY 283
GR I VNEA G GG GG GYGGG R G GG Y
Sbjct: 74 GRNITVNEAQSRGGVEAGGGRGGGGYGGGRREGGGGGY 111
[250][TOP]
>UniRef100_B6T5N8 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6T5N8_MAIZE
Length = 146
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 19 LTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEANAA 132
L N FS +G V ++ + DRET RSRGFGFVT A
Sbjct: 24 LNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDA 61
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = +2
Query: 155 DGTEFMGRTIRVNEATPLGERPPGGRGGGRGYGGGGRGRGGDY 283
+G E GR I VNEA + GGRGGG G GGGR GG Y
Sbjct: 70 NGKELDGRNITVNEA-----QSRGGRGGGGGGYGGGRRDGGGY 107