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[1][TOP] >UniRef100_C1EFA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EFA8_9CHLO Length = 1616 Score = 156 bits (394), Expect = 9e-37 Identities = 75/111 (67%), Positives = 94/111 (84%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTNDV+AML TYGVEAAR T+++EV++VF YGIGVD RHL+LIADFM QG YR C+R Sbjct: 1502 TTNDVYAMLQTYGVEAARQTLVQEVRNVFGVYGIGVDARHLTLIADFMMQQGNYRPCSRA 1561 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 GIE+S SPFLKMS+ETAA FL DAT++G+ D L+SP++R+ +GRV +LGTG Sbjct: 1562 GIETSPSPFLKMSYETAAAFLVDATMKGAEDTLESPSSRIVMGRVPDLGTG 1612 [2][TOP] >UniRef100_Q00WA2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q00WA2_OSTTA Length = 1789 Score = 154 bits (390), Expect = 3e-36 Identities = 75/118 (63%), Positives = 90/118 (76%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N V ++ T+GVEA RAT++ EVQ+VFS YGIGVD RHLSLI DFMT QG YR CNR G Sbjct: 1659 SNSVWDIMQTFGVEAGRATLVSEVQAVFSVYGIGVDARHLSLIGDFMTQQGEYRPCNRSG 1718 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IE S+SPFLKMS+ETA FLT+AT+RG DDL SP++R+ VGR V LGTG L + Sbjct: 1719 IEKSISPFLKMSYETATAFLTEATIRGETDDLSSPSSRIVVGRTVNLGTGSFSLKHDV 1776 [3][TOP] >UniRef100_A4SAV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SAV6_OSTLU Length = 1663 Score = 153 bits (387), Expect = 6e-36 Identities = 75/118 (63%), Positives = 89/118 (75%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N V ++ T+GVEA R+T++ EVQ+VF YGIGVD RHLSLI DFMT QG YR CNR G Sbjct: 1527 SNSVWDIMQTFGVEAGRSTLVSEVQAVFGVYGIGVDTRHLSLIGDFMTQQGEYRPCNRSG 1586 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IE S SPFLKMS+ETA FLTDAT+RG DDL SP++R+ VGR V+LGTG L I Sbjct: 1587 IEKSTSPFLKMSYETATAFLTDATIRGETDDLSSPSSRIVVGRTVDLGTGSFSLKHDI 1644 [4][TOP] >UniRef100_P15398 DNA-directed RNA polymerase I subunit rpa1 n=1 Tax=Schizosaccharomyces pombe RepID=RPA1_SCHPO Length = 1689 Score = 152 bits (383), Expect = 2e-35 Identities = 74/114 (64%), Positives = 88/114 (77%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L YGVEAAR I+ EV SVF YGI VDPRHLSLIAD+MT +GGY+A NR+G Sbjct: 1566 TNDIAAILRIYGVEAARNAIVHEVSSVFGVYGIAVDPRHLSLIADYMTFEGGYKAFNRMG 1625 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 IE + SPF KMSFET HFLT+A LRG VDDL +P++RL VGRV GTG ++ Sbjct: 1626 IEYNTSPFAKMSFETTCHFLTEAALRGDVDDLSNPSSRLVVGRVGNFGTGSFDI 1679 [5][TOP] >UniRef100_C1N756 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N756_9CHLO Length = 1665 Score = 149 bits (375), Expect = 1e-34 Identities = 72/110 (65%), Positives = 87/110 (79%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV+AM+ TYGVEAAR T++ EV+ VF YGI VD RHLSLI DFM QG YR C+R G Sbjct: 1531 TNDVYAMMQTYGVEAARETLVAEVRGVFGVYGIAVDARHLSLIGDFMMAQGDYRPCSRAG 1590 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 +E+S SP LKMSFETAA FL DAT+RG D L+SP+AR+ +GR V++GTG Sbjct: 1591 METSTSPLLKMSFETAAAFLVDATMRGQEDTLESPSARIVLGRTVDMGTG 1640 [6][TOP] >UniRef100_B6K3G0 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K3G0_SCHJY Length = 1657 Score = 149 bits (375), Expect = 1e-34 Identities = 74/118 (62%), Positives = 89/118 (75%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L YGVEAAR I+RE+ SVF YGI VD RHLSLIAD+MT +GGY+A NR+G Sbjct: 1536 TNDIAAVLRIYGVEAARNAIVREISSVFGVYGIDVDHRHLSLIADYMTFEGGYKAFNRMG 1595 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IE S SPF KMSFET HFLTDA L GS D++ +P+ARL VGRV GTG +L+ + Sbjct: 1596 IEYSTSPFAKMSFETTCHFLTDAALSGSKDEVMNPSARLVVGRVGNFGTGSFDLLTPV 1653 [7][TOP] >UniRef100_B9SL65 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SL65_RICCO Length = 1686 Score = 148 bits (373), Expect = 2e-34 Identities = 70/119 (58%), Positives = 95/119 (79%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N++HAML TYGVEAAR TI+RE+ VF +YGI V RHLSLIADFMTH GGYR +R+ Sbjct: 1566 SNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMG 1625 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI S+SPF KMSFETA+ F+ +A L G +D+L++P+AR+C+G V++GTG +L+Q++ Sbjct: 1626 GIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684 [8][TOP] >UniRef100_UPI0001983DA2 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983DA2 Length = 1740 Score = 146 bits (369), Expect = 7e-34 Identities = 73/119 (61%), Positives = 96/119 (80%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N+VHAML T+GVEAARATI++EV +VF+AYG+ V+ RHLSLIADFMTH GGYR NR Sbjct: 1620 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1679 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI SVSPF KM+FETA+ F+ +A G D+L+S +AR+C+G V++GTGC +L+Q+I Sbjct: 1680 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1738 [9][TOP] >UniRef100_A7PWB4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PWB4_VITVI Length = 1518 Score = 146 bits (369), Expect = 7e-34 Identities = 73/119 (61%), Positives = 96/119 (80%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N+VHAML T+GVEAARATI++EV +VF+AYG+ V+ RHLSLIADFMTH GGYR NR Sbjct: 1398 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1457 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI SVSPF KM+FETA+ F+ +A G D+L+S +AR+C+G V++GTGC +L+Q+I Sbjct: 1458 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1516 [10][TOP] >UniRef100_B3S2I6 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S2I6_TRIAD Length = 1724 Score = 146 bits (368), Expect = 9e-34 Identities = 69/118 (58%), Positives = 89/118 (75%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++HAM TYG+EAA I++E+++VF YGI V+ RHLSLIAD+MT++G YR NR+G Sbjct: 1604 TNEIHAMASTYGIEAAYRAIIKEIENVFRVYGIDVNYRHLSLIADYMTYEGSYRPLNRLG 1663 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + S SPF KMSFET HFL +AT G +D LKSP++RL GRVV GTGC +LVQ + Sbjct: 1664 MASCSSPFQKMSFETTVHFLREATAHGEIDVLKSPSSRLVTGRVVNGGTGCFDLVQPL 1721 [11][TOP] >UniRef100_A7S9W9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S9W9_NEMVE Length = 1242 Score = 146 bits (368), Expect = 9e-34 Identities = 71/118 (60%), Positives = 90/118 (76%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+HA+ TYG+EAA I +EV++VF YGI VDPRHL+L++D+MT++G +A NRIG Sbjct: 1124 TNDIHAVARTYGIEAAARAITKEVKNVFGGYGIHVDPRHLTLVSDYMTYEGKIKAFNRIG 1183 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IESS SPF KMSFET HFL A L G ++ LKSP++RL VGRVV GTG EL+Q + Sbjct: 1184 IESSASPFQKMSFETTTHFLRGAVLSGDMESLKSPSSRLVVGRVVGGGTGSFELLQPL 1241 [12][TOP] >UniRef100_C3ZBW5 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZBW5_BRAFL Length = 1731 Score = 143 bits (361), Expect = 6e-33 Identities = 68/118 (57%), Positives = 91/118 (77%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N +HAM TYG+EAA I++E++ VF+ YGI VDPRHLSL+AD+MT++G Y+ NR G Sbjct: 1613 SNHIHAMANTYGIEAACRIIVKEIKEVFAVYGIEVDPRHLSLVADYMTYEGVYKPFNRTG 1672 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+S+ SPF +MSFET+ FL +AT+ G+ DDLKSP+ARL GR V GTGC EL+Q + Sbjct: 1673 IQSNASPFQQMSFETSMQFLKEATISGAKDDLKSPSARLVTGRPVMGGTGCFELLQPL 1730 [13][TOP] >UniRef100_B9HA71 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HA71_POPTR Length = 464 Score = 140 bits (354), Expect = 4e-32 Identities = 67/119 (56%), Positives = 93/119 (78%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N +H ML YGVEAAR TI+RE++ VF++YGI V+ RHLSLIAD+MTH G YR +RI Sbjct: 344 SNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIG 403 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI S+SP KMSFETA+ F+ +A L G VD+L++P+AR+C+G V++GTG +L+Q++ Sbjct: 404 GISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 462 [14][TOP] >UniRef100_UPI00006A0029 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A190). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0029 Length = 1733 Score = 134 bits (338), Expect = 3e-30 Identities = 64/116 (55%), Positives = 88/116 (75%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+H M T+G+EAA + RE++ VF+ YGI VDPRHLSL+AD+M +G Y+ NRIG Sbjct: 1615 SNDIHTMAKTFGIEAALRVVEREIKDVFAVYGIEVDPRHLSLVADYMCFEGTYKPLNRIG 1674 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 ++SS SPF +M+FET+ FL DAT+ G+ DDL+SP+A L VG+VV+ GTG +L Q Sbjct: 1675 MQSSSSPFQQMTFETSYKFLKDATMNGARDDLQSPSACLVVGKVVKGGTGLFDLKQ 1730 [15][TOP] >UniRef100_Q3UZ02 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus RepID=Q3UZ02_MOUSE Length = 742 Score = 134 bits (338), Expect = 3e-30 Identities = 66/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 624 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 683 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q + Sbjct: 684 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 741 [16][TOP] >UniRef100_Q3UHI3 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q3UHI3_MOUSE Length = 1717 Score = 134 bits (338), Expect = 3e-30 Identities = 66/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q + Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716 [17][TOP] >UniRef100_O35134 DNA-directed RNA polymerase I subunit RPA1 n=2 Tax=Mus musculus RepID=RPA1_MOUSE Length = 1717 Score = 134 bits (338), Expect = 3e-30 Identities = 66/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q + Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716 [18][TOP] >UniRef100_Q0DAZ6 Os06g0612200 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DAZ6_ORYSJ Length = 237 Score = 134 bits (337), Expect = 4e-30 Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G Sbjct: 111 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 170 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 + + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q Sbjct: 171 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 227 [19][TOP] >UniRef100_Q8UVY7 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis RepID=Q8UVY7_XENLA Length = 1730 Score = 134 bits (337), Expect = 4e-30 Identities = 64/116 (55%), Positives = 89/116 (76%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ T+G+EAA + +E++ VF+ YGI VDPRHLSL+AD+M +G YR NRIG Sbjct: 1612 SNDIHAIANTFGIEAALRVVEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGTYRPLNRIG 1671 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 ++SS SPF +M+FET+ FL DAT+ G+ DDL+SP+A L VG+VV+ GTG +L Q Sbjct: 1672 MQSSSSPFQQMTFETSYKFLKDATMNGARDDLQSPSACLVVGKVVKGGTGLFDLKQ 1727 [20][TOP] >UniRef100_Q69X40 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q69X40_ORYSJ Length = 1748 Score = 134 bits (337), Expect = 4e-30 Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G Sbjct: 1622 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 1681 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 + + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q Sbjct: 1682 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 1738 [21][TOP] >UniRef100_C5YUX4 Putative uncharacterized protein Sb09g027230 n=1 Tax=Sorghum bicolor RepID=C5YUX4_SORBI Length = 311 Score = 134 bits (337), Expect = 4e-30 Identities = 68/120 (56%), Positives = 86/120 (71%), Gaps = 1/120 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+HA+L TYGVEAAR TI+ EV VF YGI VD RHLS+IADFMT GGYR NRI Sbjct: 184 TSNDIHAILKTYGVEAARNTIINEVSGVFKPYGIDVDMRHLSMIADFMTLDGGYRPMNRI 243 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI + S SPF KM+FETA F+ +A G D L+ P+A +C+G+ ++GTG L+Q + Sbjct: 244 GIGQFSTSPFGKMTFETATKFIVEAATHGEADFLECPSASVCLGKPPKVGTGIFGLLQNL 303 [22][TOP] >UniRef100_B9FU47 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9FU47_ORYSJ Length = 209 Score = 134 bits (337), Expect = 4e-30 Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G Sbjct: 83 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 142 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 + + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q Sbjct: 143 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 199 [23][TOP] >UniRef100_B8B4L0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8B4L0_ORYSI Length = 1350 Score = 134 bits (337), Expect = 4e-30 Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G Sbjct: 1224 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 1283 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 + + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q Sbjct: 1284 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 1340 [24][TOP] >UniRef100_C0JAC0 DNA-directed RNA polymerase n=1 Tax=Oryza coarctata RepID=C0JAC0_ORYCO Length = 1830 Score = 133 bits (335), Expect = 6e-30 Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 1/117 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAML YGVEAARATI++EV VFSAYGI VD RHL++IADFMT GGYR +R G Sbjct: 1704 SNDIHAMLKIYGVEAARATIIQEVSGVFSAYGINVDMRHLNMIADFMTFDGGYRPMSRQG 1763 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169 + + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q Sbjct: 1764 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASICLGKPVKMGTGSFGLLQ 1820 [25][TOP] >UniRef100_UPI00002506FD DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A194). n=1 Tax=Rattus norvegicus RepID=UPI00002506FD Length = 1716 Score = 133 bits (334), Expect = 8e-30 Identities = 65/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1598 SNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1657 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q + Sbjct: 1658 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715 [26][TOP] >UniRef100_Q0U0A2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0U0A2_PHANO Length = 1691 Score = 133 bits (334), Expect = 8e-30 Identities = 67/123 (54%), Positives = 88/123 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ ML YGVEA RATI+RE+ +VFS +GI VD RHL+LIAD MT GG+ NRIG Sbjct: 1544 TNDIVGMLQLYGVEACRATIVREMHAVFSGHGISVDLRHLNLIADTMTKGGGFTPFNRIG 1603 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 ++++VSPF KMSFET FL DA L DDL +P+AR+ VGR+ +LGTG +++ + Sbjct: 1604 LKTNVSPFSKMSFETTVGFLKDAVLERDWDDLSNPSARIVVGRLGKLGTGAFDVLAPVNV 1663 Query: 156 LAP 148 + P Sbjct: 1664 IDP 1666 [27][TOP] >UniRef100_O54889 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Rattus norvegicus RepID=RPA1_RAT Length = 1716 Score = 133 bits (334), Expect = 8e-30 Identities = 65/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1598 SNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1657 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q + Sbjct: 1658 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715 [28][TOP] >UniRef100_UPI0000EBD25A PREDICTED: similar to polymerase (RNA) I polypeptide A, 194kDa n=1 Tax=Bos taurus RepID=UPI0000EBD25A Length = 1717 Score = 132 bits (333), Expect = 1e-29 Identities = 65/118 (55%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1599 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL ATL GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1659 IRSNSSPLQQMTFETSFQFLKQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1716 [29][TOP] >UniRef100_UPI000179E6F1 UPI000179E6F1 related cluster n=1 Tax=Bos taurus RepID=UPI000179E6F1 Length = 1729 Score = 132 bits (333), Expect = 1e-29 Identities = 65/118 (55%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1611 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1670 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL ATL GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1671 IRSNSSPLQQMTFETSFQFLKQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1728 [30][TOP] >UniRef100_Q5KIF6 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KIF6_CRYNE Length = 1727 Score = 132 bits (332), Expect = 1e-29 Identities = 64/115 (55%), Positives = 84/115 (73%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 ++ND++A+L T+GVEAAR I+ EV SVF AYGI VD RHL++IAD+MTH GG+R NR Sbjct: 1607 SSNDIYAILQTFGVEAARRAIIDEVSSVFGAYGIAVDYRHLTIIADYMTHAGGFRPFNRT 1666 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI + SP LK SFET FL++ATL G DDL SPAA++ +G+ GTG ++ Sbjct: 1667 GISAKSSPLLKASFETTVAFLSEATLHGDFDDLTSPAAKIVMGKPSASGTGAFDI 1721 [31][TOP] >UniRef100_Q86H36 DNA-directed RNA polymerase I subunit rpa1 n=1 Tax=Dictyostelium discoideum RepID=RPA1_DICDI Length = 1615 Score = 132 bits (332), Expect = 1e-29 Identities = 62/118 (52%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND++A+L YGVEA R + E+ +VF+AYGI VD RHL L+ D+MT +GGYRA NRIG Sbjct: 1497 TNDIYAILQKYGVEACRQAVTSEISNVFAAYGISVDKRHLILLGDYMTFEGGYRALNRIG 1556 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IE++ SPF KMSFET FL+ A+L G D + SP++R+ +G++V+ GTG +V + Sbjct: 1557 IENNTSPFQKMSFETTFSFLSKASLMGDYDTVTSPSSRIVLGQIVKNGTGSFTIVAPV 1614 [32][TOP] >UniRef100_UPI00005A33A4 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit (RNA polymerase I 194 kDa subunit) (RPA194) n=1 Tax=Canis lupus familiaris RepID=UPI00005A33A4 Length = 1699 Score = 132 bits (331), Expect = 2e-29 Identities = 64/118 (54%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1581 SNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1640 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1641 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1698 [33][TOP] >UniRef100_UPI0000EB2786 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A190). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB2786 Length = 1726 Score = 132 bits (331), Expect = 2e-29 Identities = 64/118 (54%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1608 SNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1667 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1668 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1725 [34][TOP] >UniRef100_UPI0001797135 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa n=1 Tax=Equus caballus RepID=UPI0001797135 Length = 1719 Score = 131 bits (330), Expect = 2e-29 Identities = 64/118 (54%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1601 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1660 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 1661 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1718 [35][TOP] >UniRef100_UPI0000E1F513 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa isoform 4 n=1 Tax=Pan troglodytes RepID=UPI0000E1F513 Length = 1515 Score = 131 bits (329), Expect = 3e-29 Identities = 64/118 (54%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1397 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1456 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1457 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1514 [36][TOP] >UniRef100_UPI0000E1F511 PREDICTED: hypothetical protein isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000E1F511 Length = 1662 Score = 131 bits (329), Expect = 3e-29 Identities = 64/118 (54%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1544 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1603 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1604 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1661 [37][TOP] >UniRef100_UPI0000E1F510 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa isoform 3 n=2 Tax=Pan troglodytes RepID=UPI0000E1F510 Length = 1723 Score = 131 bits (329), Expect = 3e-29 Identities = 64/118 (54%), Positives = 86/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1605 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1664 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1665 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1722 [38][TOP] >UniRef100_B2VT60 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VT60_PYRTR Length = 1790 Score = 131 bits (329), Expect = 3e-29 Identities = 65/118 (55%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ AML YGVEA RATI+RE+ +VFS +GI VD RHL+LIAD MT GG+ +RIG Sbjct: 1587 TNDIAAMLRIYGVEAGRATIVREMHNVFSGHGISVDHRHLNLIADTMTKGGGFTPFSRIG 1646 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ +VSPF+KMSFET FL DA L D+LK+P+AR+ VGR+ +GTG +++ + Sbjct: 1647 LKGNVSPFMKMSFETTVGFLKDAVLERDWDELKNPSARIVVGRLGGIGTGAFDVLAPV 1704 [39][TOP] >UniRef100_C5LXY1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LXY1_9ALVE Length = 1775 Score = 130 bits (328), Expect = 4e-29 Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G Sbjct: 1632 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1691 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169 +E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ + Sbjct: 1692 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1751 Query: 168 QIGGLA 151 + GLA Sbjct: 1752 SVRGLA 1757 [40][TOP] >UniRef100_C5KZW7 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KZW7_9ALVE Length = 1774 Score = 130 bits (328), Expect = 4e-29 Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G Sbjct: 1631 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1690 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169 +E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ + Sbjct: 1691 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1750 Query: 168 QIGGLA 151 + GLA Sbjct: 1751 SVRGLA 1756 [41][TOP] >UniRef100_C5KJT1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KJT1_9ALVE Length = 1549 Score = 130 bits (328), Expect = 4e-29 Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G Sbjct: 1406 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1465 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169 +E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ + Sbjct: 1466 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1525 Query: 168 QIGGLA 151 + GLA Sbjct: 1526 SVRGLA 1531 [42][TOP] >UniRef100_B2B231 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2B231_PODAN Length = 1706 Score = 130 bits (326), Expect = 7e-29 Identities = 64/118 (54%), Positives = 84/118 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAARA I+RE+ VF ++GI VD RHLSLIAD+MT GG+ NRIG Sbjct: 1580 TNDIAQVLEFYGVEAARANIVRELSGVFDSHGIAVDKRHLSLIADYMTRNGGFSPFNRIG 1639 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + +VSPF KMS+ET FL DA + G D L +P++RL VG++ LGTG +L+ Q+ Sbjct: 1640 LTGNVSPFTKMSYETTVGFLKDAVMDGEWDPLMTPSSRLVVGKLGGLGTGAFDLLTQV 1697 [43][TOP] >UniRef100_A3LYS3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3LYS3_PICST Length = 1644 Score = 130 bits (326), Expect = 7e-29 Identities = 64/120 (53%), Positives = 85/120 (70%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ VF YGI V RHL L+ D MT +G Y A NR Sbjct: 1523 TSNDVAAVLRTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLLGDMMTREGTYLAFNRQ 1582 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ Q+G Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREDLESPSARIVLGKLSNVGTGSFDVLAQLG 1642 [44][TOP] >UniRef100_Q5RAX8 DNA-directed RNA polymerase n=1 Tax=Pongo abelii RepID=Q5RAX8_PONAB Length = 1659 Score = 129 bits (325), Expect = 9e-29 Identities = 64/118 (54%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M G Y+ NR G Sbjct: 1541 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFGGVYKPLNRFG 1600 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q + Sbjct: 1601 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1658 [45][TOP] >UniRef100_C5KQT6 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KQT6_9ALVE Length = 1662 Score = 129 bits (324), Expect = 1e-28 Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G Sbjct: 1480 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1539 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169 +E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ + Sbjct: 1540 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQACVGTGCFDLRMEMPK 1599 Query: 168 QIGGLA 151 + GLA Sbjct: 1600 SVRGLA 1605 [46][TOP] >UniRef100_Q9H6T2 cDNA: FLJ21915 fis, clone HEP03920 n=1 Tax=Homo sapiens RepID=Q9H6T2_HUMAN Length = 495 Score = 129 bits (324), Expect = 1e-28 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 377 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 436 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 437 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 494 [47][TOP] >UniRef100_Q96AG9 POLR1A protein (Fragment) n=1 Tax=Homo sapiens RepID=Q96AG9_HUMAN Length = 574 Score = 129 bits (324), Expect = 1e-28 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 456 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 515 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 516 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 573 [48][TOP] >UniRef100_B9ZVN9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B9ZVN9_HUMAN Length = 1659 Score = 129 bits (324), Expect = 1e-28 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1541 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1600 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 1601 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1658 [49][TOP] >UniRef100_B7ZKR9 DNA-directed RNA polymerase n=3 Tax=Homo sapiens RepID=B7ZKR9_HUMAN Length = 1720 Score = 129 bits (324), Expect = 1e-28 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1602 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1661 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 1662 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719 [50][TOP] >UniRef100_O95602 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Homo sapiens RepID=RPA1_HUMAN Length = 1720 Score = 129 bits (324), Expect = 1e-28 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1602 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1661 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q + Sbjct: 1662 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719 [51][TOP] >UniRef100_B7S4C1 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S4C1_PHATR Length = 1674 Score = 129 bits (323), Expect = 2e-28 Identities = 61/110 (55%), Positives = 83/110 (75%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ A+ YGVEAAR++I+++++ VF AYGI VDPRHLSLIAD+MT GGY+A NRIG Sbjct: 1558 SNDIWAIRCAYGVEAARSSIVQQIRGVFGAYGIEVDPRHLSLIADYMTFDGGYKAMNRIG 1617 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 +E + S L+MSFET HFL A L +D+++SP+A + VGR + GTG Sbjct: 1618 MEETSSTLLQMSFETTLHFLRQAALVEDMDEMQSPSANIVVGRPIRHGTG 1667 [52][TOP] >UniRef100_UPI000151B566 hypothetical protein PGUG_03709 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B566 Length = 1632 Score = 128 bits (322), Expect = 2e-28 Identities = 62/120 (51%), Positives = 86/120 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ A+L TYGVEAAR TI+ E+ +VF Y I V RHL LI D MT +G Y A NR Sbjct: 1512 TSNDIAAVLKTYGVEAARNTIVNEINNVFDRYAISVSSRHLDLIGDMMTREGTYLAFNRQ 1571 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 GI+SS S F+KMS+ET FLT A L G+ +DL+SP+A++ VG++ +GTG +++ ++G Sbjct: 1572 GIDSSTSAFMKMSYETTCQFLTKAVLDGTTEDLESPSAQIVVGKLSNVGTGSFDVLAKMG 1631 [53][TOP] >UniRef100_A5DKA8 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DKA8_PICGU Length = 1632 Score = 128 bits (322), Expect = 2e-28 Identities = 62/120 (51%), Positives = 86/120 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ A+L TYGVEAAR TI+ E+ +VF Y I V RHL LI D MT +G Y A NR Sbjct: 1512 TSNDIAAVLKTYGVEAARNTIVNEINNVFDRYAISVSSRHLDLIGDMMTREGTYLAFNRQ 1571 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 GI+SS S F+KMS+ET FLT A L G+ +DL+SP+A++ VG++ +GTG +++ ++G Sbjct: 1572 GIDSSTSAFMKMSYETTCQFLTKAVLDGTTEDLESPSAQIVVGKLSNVGTGSFDVLAKMG 1631 [54][TOP] >UniRef100_Q59LW3 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q59LW3_CANAL Length = 1665 Score = 128 bits (321), Expect = 3e-28 Identities = 63/119 (52%), Positives = 85/119 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR Sbjct: 1544 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1603 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+ Sbjct: 1604 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1662 [55][TOP] >UniRef100_C4YCY1 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YCY1_CANAL Length = 1577 Score = 128 bits (321), Expect = 3e-28 Identities = 63/119 (52%), Positives = 85/119 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR Sbjct: 1456 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1515 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+ Sbjct: 1516 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1574 [56][TOP] >UniRef100_B9W974 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9W974_CANDC Length = 1656 Score = 128 bits (321), Expect = 3e-28 Identities = 63/119 (52%), Positives = 85/119 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR Sbjct: 1535 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1594 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+ Sbjct: 1595 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1653 [57][TOP] >UniRef100_C5MB39 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MB39_CANTT Length = 845 Score = 127 bits (320), Expect = 3e-28 Identities = 61/119 (51%), Positives = 86/119 (72%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND++A+L TYGVEAAR TI+ E+ VF+ YGI V RHL LIAD MT +G Y A NR Sbjct: 723 TSNDIYAVLKTYGVEAARNTIVNEIYRVFNTYGISVSSRHLDLIADMMTREGTYLAFNRQ 782 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G ++L+SP++++ +G++ +GTG ++ Q+ Sbjct: 783 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSSKIVMGKLASVGTGSFDVFAQM 841 [58][TOP] >UniRef100_C4YAX5 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4YAX5_CLAL4 Length = 1248 Score = 127 bits (320), Expect = 3e-28 Identities = 64/122 (52%), Positives = 86/122 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT +G Y A NR G Sbjct: 1127 SNDISAVLRTYGVEAARNTIVNEINNVFSTYAISVSSRHLDLIADMMTREGSYLAFNRQG 1186 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 I+SS S F KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ Q+ Sbjct: 1187 IDSSTSAFKKMSYETTCQFLTKAVLDGDREDLESPSARIVMGKLSNVGTGSFDVMAQMPT 1246 Query: 156 LA 151 +A Sbjct: 1247 VA 1248 [59][TOP] >UniRef100_UPI0000E804C6 PREDICTED: similar to RNA polymerase I 194 kDa subunit n=1 Tax=Gallus gallus RepID=UPI0000E804C6 Length = 1286 Score = 127 bits (319), Expect = 5e-28 Identities = 59/118 (50%), Positives = 88/118 (74%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1168 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 1227 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q + Sbjct: 1228 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 1285 [60][TOP] >UniRef100_UPI0000ECC671 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A190). n=1 Tax=Gallus gallus RepID=UPI0000ECC671 Length = 745 Score = 127 bits (319), Expect = 5e-28 Identities = 59/118 (50%), Positives = 88/118 (74%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 627 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 686 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q + Sbjct: 687 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 744 [61][TOP] >UniRef100_UPI0000ECC670 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A190). n=1 Tax=Gallus gallus RepID=UPI0000ECC670 Length = 917 Score = 127 bits (319), Expect = 5e-28 Identities = 59/118 (50%), Positives = 88/118 (74%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 799 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 858 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q + Sbjct: 859 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 916 [62][TOP] >UniRef100_Q6C1S4 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6C1S4_YARLI Length = 1628 Score = 127 bits (319), Expect = 5e-28 Identities = 61/114 (53%), Positives = 85/114 (74%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++A+L TYGVEAAR T+++E+ +VF Y I V+ RHL LIAD MT +G Y A NR+G Sbjct: 1505 SNDIYAVLKTYGVEAARNTMVQEINNVFKTYAITVNLRHLELIADMMTREGTYLAFNRMG 1564 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 ++S+ SPFLKMS+ET FLT A L G D L+SP+AR+ +GR+ +GTG ++ Sbjct: 1565 VDSNTSPFLKMSYETTCGFLTKAVLDGGCDALESPSARIVIGRLSGVGTGSFDV 1618 [63][TOP] >UniRef100_C5JKG0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JKG0_AJEDS Length = 1645 Score = 127 bits (319), Expect = 5e-28 Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + ML+ YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G Sbjct: 1526 TNSIADMLLMYGVEAARASIIREMAAVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1585 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ S SPF+KMSFET FL DA L D+L SP++R+ +GRV +GTG +++ +G Sbjct: 1586 LVKDSTSPFMKMSFETTVGFLRDAVLERDWDNLDSPSSRIVMGRVGTIGTGAFDVLAPVG 1645 [64][TOP] >UniRef100_C5G7Q4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5G7Q4_AJEDR Length = 1646 Score = 127 bits (319), Expect = 5e-28 Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + ML+ YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G Sbjct: 1527 TNSIADMLLMYGVEAARASIIREMAAVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1586 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ S SPF+KMSFET FL DA L D+L SP++R+ +GRV +GTG +++ +G Sbjct: 1587 LVKDSTSPFMKMSFETTVGFLRDAVLERDWDNLDSPSSRIVMGRVGTIGTGAFDVLAPVG 1646 [65][TOP] >UniRef100_A8NX07 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX07_COPC7 Length = 138 Score = 127 bits (318), Expect = 6e-28 Identities = 62/117 (52%), Positives = 83/117 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++A+L TYGVE ARA I++EV VF+AY I VD RHL LIAD+MT GGY+ NR G Sbjct: 20 SNDIYALLKTYGVEMARAAILKEVGGVFAAYSIQVDRRHLELIADYMTFDGGYKPFNRKG 79 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + ++ SP LK S+ET A FL+DATL G DDL +P+ + +GR GTG +++ Q Sbjct: 80 LSTNPSPLLKASYETTAAFLSDATLYGDFDDLTTPSGNIVLGRPNATGTGVFDVLMQ 136 [66][TOP] >UniRef100_A7EW95 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EW95_SCLS1 Length = 1705 Score = 126 bits (317), Expect = 8e-28 Identities = 60/119 (50%), Positives = 87/119 (73%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TND+ AML YGVEA R+TI++E+ SVF+ + I VD RHL+LIAD+MT GG+ NR Sbjct: 1575 STNDIAAMLENYGVEACRSTIVQELHSVFAGHAIQVDMRHLNLIADYMTRGGGFSPFNRN 1634 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G++ SVSPF+KMSFET FL DA DDL +P++R+ +GR+ ++GTG +++ ++ Sbjct: 1635 GMKGSVSPFMKMSFETTVGFLADAVAECDWDDLANPSSRIVIGRMSKVGTGAFDVLTKV 1693 [67][TOP] >UniRef100_A5DSZ8 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5DSZ8_LODEL Length = 1668 Score = 126 bits (317), Expect = 8e-28 Identities = 61/119 (51%), Positives = 84/119 (70%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ ++L TYGVEAAR TI+ E+ VF YGI V P HL LIAD MT +G Y A NR Sbjct: 1545 TSNDIASVLRTYGVEAARNTIVNEIYRVFDTYGISVSPHHLELIADMMTREGSYLAFNRQ 1604 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+ Sbjct: 1605 GIDSSTSSFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1663 [68][TOP] >UniRef100_UPI0001760178 PREDICTED: polymerase (RNA) I polypeptide A n=1 Tax=Danio rerio RepID=UPI0001760178 Length = 1692 Score = 126 bits (316), Expect = 1e-27 Identities = 62/118 (52%), Positives = 84/118 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1574 SNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFG 1633 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+S+ SP +M+FET+ FL AT+ GS D L SP+A L VG+VV+ GTG +L Q + Sbjct: 1634 IQSNSSPLQQMTFETSFKFLKQATMLGSYDKLSSPSACLVVGKVVKGGTGIFDLKQPL 1691 [69][TOP] >UniRef100_UPI0001A2CE6F UPI0001A2CE6F related cluster n=1 Tax=Danio rerio RepID=UPI0001A2CE6F Length = 732 Score = 126 bits (316), Expect = 1e-27 Identities = 62/118 (52%), Positives = 84/118 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 614 SNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFG 673 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+S+ SP +M+FET+ FL AT+ GS D L SP+A L VG+VV+ GTG +L Q + Sbjct: 674 IQSNSSPLQQMTFETSFKFLKQATMLGSYDKLSSPSACLVVGKVVKGGTGIFDLKQPL 731 [70][TOP] >UniRef100_A4RCX8 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4RCX8_MAGGR Length = 1719 Score = 126 bits (316), Expect = 1e-27 Identities = 63/118 (53%), Positives = 83/118 (70%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TNDV A+L YGVEA RA I+RE+++VF ++ I VD RHL+LIAD MT GG+ NR+ Sbjct: 1590 STNDVAAVLEIYGVEACRANIIRELRAVFESHAITVDNRHLNLIADHMTRSGGFTPFNRM 1649 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 G+ +VSPF KMSFET FL DA L G DDL +P+ RL +GR+ +GTG ++ Q Sbjct: 1650 GLSGNVSPFTKMSFETTLAFLKDAVLDGDWDDLSTPSGRLVMGRLGHVGTGAFDVFTQ 1707 [71][TOP] >UniRef100_Q1E235 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis RepID=Q1E235_COCIM Length = 1690 Score = 125 bits (315), Expect = 1e-27 Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GG+R NR+G Sbjct: 1571 SNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGFRPFNRMG 1630 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 I + S SPF+KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G Sbjct: 1631 IVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1690 [72][TOP] >UniRef100_C5PA97 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PA97_COCP7 Length = 1690 Score = 125 bits (315), Expect = 1e-27 Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GG+R NR+G Sbjct: 1571 SNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGFRPFNRMG 1630 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 I + S SPF+KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G Sbjct: 1631 IVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1690 [73][TOP] >UniRef100_UPI000155D146 PREDICTED: similar to RNA polymerase I 194 kDa subunit n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155D146 Length = 560 Score = 125 bits (314), Expect = 2e-27 Identities = 62/118 (52%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 442 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIQVDPRHLSLVADYMCFEGVYKPLNRYG 501 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+S+ SP +M+FET+ FL AT G D+L+SP+A L VG+VV+ GTG +L Q + Sbjct: 502 IQSNSSPLQQMTFETSFKFLKQATHDGVSDELRSPSACLVVGKVVKGGTGLFDLKQPL 559 [74][TOP] >UniRef100_UPI00003BD73B hypothetical protein DEHA0C11682g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD73B Length = 1644 Score = 125 bits (314), Expect = 2e-27 Identities = 62/119 (52%), Positives = 85/119 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 ++ND+ A+L TYGVEAAR TI+ EVQ+VF Y I V RHL LI D MT +G Y A NR Sbjct: 1523 SSNDIAAVLRTYGVEAARNTIVNEVQNVFDRYAIAVSSRHLDLIGDMMTREGTYLAFNRQ 1582 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ ++ Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGEREDLESPSARIVMGKLSNVGTGSFDVLARM 1641 [75][TOP] >UniRef100_Q9SVY0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9SVY0_ARATH Length = 1670 Score = 125 bits (314), Expect = 2e-27 Identities = 61/119 (51%), Positives = 83/119 (69%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N +H ML +GVEAAR TI+RE+ VF +YGI V RHL+LIAD+MT GGYR +R+ Sbjct: 1550 SNSIHDMLNIFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMG 1609 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI S SPF +M+FETA F+ A G D L++P+AR+C+G GTGC +L+Q++ Sbjct: 1610 GIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRV 1668 [76][TOP] >UniRef100_Q759A3 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q759A3_ASHGO Length = 1640 Score = 125 bits (314), Expect = 2e-27 Identities = 63/119 (52%), Positives = 84/119 (70%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1518 TSNDVSAVLKTYGVEAARNTIVNEINNVFSRYAISVSYRHLDLIADMMTRQGTYLAFNRQ 1577 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ESS S +KMS+ET FLT A L ++LKSP+A+L +G++ +GTG +++ ++ Sbjct: 1578 GMESSTSSLMKMSYETTCQFLTKAVLDNEREELKSPSAKLVLGKLNSVGTGAFDILAKV 1636 [77][TOP] >UniRef100_B5RT96 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RT96_DEBHA Length = 1644 Score = 125 bits (314), Expect = 2e-27 Identities = 62/119 (52%), Positives = 85/119 (71%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 ++ND+ A+L TYGVEAAR TI+ EVQ+VF Y I V RHL LI D MT +G Y A NR Sbjct: 1523 SSNDIAAVLRTYGVEAARNTIVNEVQNVFDRYAIAVSSRHLDLIGDMMTREGTYLAFNRQ 1582 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ ++ Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGEREDLESPSARIVMGKLSNVGTGSFDVLARM 1641 [78][TOP] >UniRef100_B8M0T3 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8M0T3_TALSN Length = 1689 Score = 125 bits (313), Expect = 2e-27 Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAAR+TI+RE+ VFS + I VD RHL+LI D MTH GG+++ +R G Sbjct: 1570 TNSIHDMLIFYGVEAARSTIIREMSDVFSGHSITVDNRHLNLIGDVMTHSGGFKSYSRNG 1629 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I+ S SPF K SFET+ F+ DA L DDLKSP++R+ VGR+ +GTG +++ + Sbjct: 1630 LIKESNSPFSKSSFETSVGFMRDAVLERDFDDLKSPSSRIVVGRLGNVGTGAFDILAPV 1688 [79][TOP] >UniRef100_UPI000023EF7C hypothetical protein FG04291.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023EF7C Length = 1694 Score = 124 bits (312), Expect = 3e-27 Identities = 61/118 (51%), Positives = 83/118 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L YGVEAAR I+ E+ VF ++GI VD RHL+LI D MT GG+ NR+G Sbjct: 1568 TNDIAAVLEVYGVEAARQNIVNELDGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMG 1627 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ +VSPF KMSFET FL DA L G DDL +P+ RL +GR+ ++GTG +++ Q+ Sbjct: 1628 LKGNVSPFTKMSFETTLGFLKDAVLDGDWDDLSTPSGRLVMGRLGKVGTGGFDVLAQL 1685 [80][TOP] >UniRef100_Q8WZX8 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q8WZX8_NEUCR Length = 1701 Score = 124 bits (312), Expect = 3e-27 Identities = 60/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YGVEAAR +I+RE+ VF +GIGVDPRHL+LI D+MT GG+ NR+G Sbjct: 1575 TNDIAQVLEIYGVEAARNSIVRELSGVFKGHGIGVDPRHLNLIGDYMTRNGGFTPFNRMG 1634 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + +VSPF KMS+ET FL DA L G D L +P+ RL VG++ GTG ++ ++ Sbjct: 1635 LTGNVSPFTKMSYETTVGFLKDAVLDGDWDSLDTPSGRLVVGKLGVTGTGSFDVFTKV 1692 [81][TOP] >UniRef100_C9SE91 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SE91_9PEZI Length = 1686 Score = 124 bits (311), Expect = 4e-27 Identities = 61/118 (51%), Positives = 83/118 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L YGVEA R+ I+ E+ +VF +GI VD RHL+LIAD+MT GGY NR G Sbjct: 1559 TNDIAAVLDVYGVEACRSNIVLELGNVFGGHGISVDNRHLNLIADYMTRNGGYTPFNRNG 1618 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + +VSPF KMSFET FL DA L G DDL +P++RL +GR+ + GTG +++ ++ Sbjct: 1619 LRGNVSPFTKMSFETTLAFLKDAVLDGDWDDLTTPSSRLVMGRLGKTGTGAFDVLTKL 1676 [82][TOP] >UniRef100_C6HCI4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HCI4_AJECH Length = 1676 Score = 124 bits (311), Expect = 4e-27 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G Sbjct: 1557 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1616 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G Sbjct: 1617 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1676 [83][TOP] >UniRef100_C4R1Z5 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R1Z5_PICPG Length = 1640 Score = 124 bits (311), Expect = 4e-27 Identities = 62/118 (52%), Positives = 84/118 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND +A+L TYGVEAAR TI+ E+ +VF Y I V RHL LIAD MT QG Y A NR G Sbjct: 1518 SNDTYAVLRTYGVEAARNTIVNEINNVFGRYAIAVSSRHLDLIADMMTRQGTYLAFNRQG 1577 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 IE+S S F+KMS+ET FLT A L ++L+SP+ARL VG++ ++GTG +++ ++ Sbjct: 1578 IENSTSSFMKMSYETTCQFLTKAVLDNDREELESPSARLVVGKLSKVGTGIFDVMARM 1635 [84][TOP] >UniRef100_C0NL49 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NL49_AJECG Length = 1697 Score = 124 bits (311), Expect = 4e-27 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G Sbjct: 1578 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1637 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G Sbjct: 1638 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1697 [85][TOP] >UniRef100_B0CXW7 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CXW7_LACBS Length = 1711 Score = 124 bits (311), Expect = 4e-27 Identities = 62/118 (52%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++A+L TYGVE ARA I+RE+ +F AY I VD RHL LIAD+MT GGY+ NR G Sbjct: 1593 SNDIYAILKTYGVEMARAAILREMGGIFGAYNIQVDRRHLELIADYMTFDGGYKPFNRKG 1652 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I ++ SP LK S+ET FL+DATL G DDL +P+ + +GR GTG ++V I Sbjct: 1653 ISTNPSPLLKASYETTGAFLSDATLYGDFDDLSTPSGNIVLGRPNCTGTGVFDVVMGI 1710 [86][TOP] >UniRef100_A7TPJ8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TPJ8_VANPO Length = 1656 Score = 124 bits (311), Expect = 4e-27 Identities = 62/119 (52%), Positives = 84/119 (70%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1534 TSNDVSAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1593 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+E+S S +KMS+ET FLT A L ++LKSP+AR+ +G++ +GTG +++ ++ Sbjct: 1594 GMETSTSSLMKMSYETTCQFLTKAVLDNENEELKSPSARIVLGKLNNVGTGAFDVLSKV 1652 [87][TOP] >UniRef100_A6R8S3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R8S3_AJECN Length = 1573 Score = 124 bits (311), Expect = 4e-27 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G Sbjct: 1454 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1513 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G Sbjct: 1514 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1573 [88][TOP] >UniRef100_A9UY22 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UY22_MONBE Length = 1592 Score = 124 bits (310), Expect = 5e-27 Identities = 62/117 (52%), Positives = 81/117 (69%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 NDV+AM TYGVEA + +I+RE+ +VF YGI V+ RHLSL+AD+M +G YR NRI + Sbjct: 1467 NDVNAMFETYGVEAGQRSIIRELSAVFDVYGIAVNHRHLSLVADYMAFEGDYRGMNRISM 1526 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 SS PFLKMSFE+ FL +TLRG D L+S ++RL +G V GTG +VQ + Sbjct: 1527 RSSTDPFLKMSFESTTDFLRASTLRGDHDTLQSNSSRLVLGAVTAGGTGVCSVVQPL 1583 [89][TOP] >UniRef100_C8ZH93 Rpa190p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZH93_YEAST Length = 1664 Score = 124 bits (310), Expect = 5e-27 Identities = 64/123 (52%), Positives = 84/123 (68%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++ Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661 Query: 159 GLA 151 A Sbjct: 1662 NAA 1664 [90][TOP] >UniRef100_B6QC93 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QC93_PENMQ Length = 1689 Score = 124 bits (310), Expect = 5e-27 Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAAR+TI+RE+ VFS + I VD RHL+LI D MTH GG+++ +R G Sbjct: 1570 TNSIHDMLIYYGVEAARSTIIREMSDVFSGHSITVDNRHLNLIGDVMTHSGGFKSYSRNG 1629 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 I S SPF K SFET+ F+ DA L DDLKSP++R+ VGR+ +GTG ++ Sbjct: 1630 LIRESNSPFSKSSFETSVGFMRDAVLERDFDDLKSPSSRIVVGRLGNVGTGAFDI 1684 [91][TOP] >UniRef100_B3LK00 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a RepID=B3LK00_YEAS1 Length = 1664 Score = 124 bits (310), Expect = 5e-27 Identities = 64/123 (52%), Positives = 84/123 (68%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++ Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661 Query: 159 GLA 151 A Sbjct: 1662 NAA 1664 [92][TOP] >UniRef100_P10964 DNA-directed RNA polymerase I subunit RPA1 n=4 Tax=Saccharomyces cerevisiae RepID=RPA1_YEAST Length = 1664 Score = 124 bits (310), Expect = 5e-27 Identities = 64/123 (52%), Positives = 84/123 (68%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++ Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661 Query: 159 GLA 151 A Sbjct: 1662 NAA 1664 [93][TOP] >UniRef100_B0EDI6 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EDI6_ENTDI Length = 1568 Score = 123 bits (309), Expect = 7e-27 Identities = 56/118 (47%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV+A+L YGVEAAR ++ E+ SVF AYGI VDPRHL+L+AD+MT++G Y++ NR G Sbjct: 1448 TNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEGEYKSLNRSG 1507 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ + SPF K++FET+ FL + G D+LKSP+ + +G+ + GTG ++ ++ Sbjct: 1508 MDHNPSPFTKITFETSLGFLAKTCVSGQKDNLKSPSGSVVMGKNMVFGTGAFDIYTEL 1565 [94][TOP] >UniRef100_C4JYF5 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JYF5_UNCRE Length = 1666 Score = 123 bits (309), Expect = 7e-27 Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GGYR NR+G Sbjct: 1547 SNSIHHMLTFYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGYRPFNRMG 1606 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 I + S SP KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G Sbjct: 1607 IVKDSTSPLTKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1666 [95][TOP] >UniRef100_C5FC46 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FC46_NANOT Length = 1680 Score = 123 bits (308), Expect = 9e-27 Identities = 65/120 (54%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N V ML YGVEAARATI+ EV +VF +GI VD RHL+LIAD MT GGYR NR+G Sbjct: 1561 SNSVSHMLGLYGVEAARATIVNEVGAVFDGHGIKVDNRHLTLIADVMTQTGGYRPFNRMG 1620 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 I + S SP +KMSFET FL DA L D+L P++R+ VGRV +GTG +++ +G Sbjct: 1621 IVKDSTSPLMKMSFETTVRFLRDAVLERDWDNLNGPSSRIVVGRVGTVGTGAFDVLAPVG 1680 [96][TOP] >UniRef100_C1GUK2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GUK2_PARBA Length = 1691 Score = 123 bits (308), Expect = 9e-27 Identities = 61/120 (50%), Positives = 85/120 (70%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA+I+RE+ +VF+++ I VD RHL+LI D MTH GG+RA NR+G Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFNSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691 [97][TOP] >UniRef100_C7YZ78 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YZ78_NECH7 Length = 1674 Score = 122 bits (307), Expect = 1e-26 Identities = 59/118 (50%), Positives = 84/118 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L YGVEAAR+ I++E+ VF ++GI VD RHL+LI D MT GG+ NR+G Sbjct: 1548 TNDIAAVLAVYGVEAARSNIVQELAGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMG 1607 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ +VSPF KMSFET FL DA L G DDL +P+ R +G++ ++GTG +++ Q+ Sbjct: 1608 LKGNVSPFTKMSFETTLSFLKDAVLDGDWDDLATPSGRSVMGKLGKVGTGGFDVLAQL 1665 [98][TOP] >UniRef100_C1FYI4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1FYI4_PARBD Length = 1691 Score = 122 bits (307), Expect = 1e-26 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691 [99][TOP] >UniRef100_C0S421 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S421_PARBP Length = 1691 Score = 122 bits (307), Expect = 1e-26 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + MLV YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 ++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691 [100][TOP] >UniRef100_UPI000179161A PREDICTED: similar to DNA-directed RNA polymerase I largest subunit n=1 Tax=Acyrthosiphon pisum RepID=UPI000179161A Length = 1606 Score = 122 bits (306), Expect = 1e-26 Identities = 57/116 (49%), Positives = 84/116 (72%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND+ ML TYG+EAA I++EV++VF YGI VD RHLSLIAD+MT+ G Y+A NR+G+ Sbjct: 1491 NDIQMMLNTYGIEAANRVIIKEVKNVFKVYGINVDTRHLSLIADYMTYDGKYKALNRVGM 1550 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 SP +MSFE+ ++L +T+RG D+L SP++ L +G+ ++G+G V+L+ Q Sbjct: 1551 NGCPSPLQQMSFESTLNYLKKSTVRGLKDNLVSPSSTLIIGQQAQIGSGLVKLLWQ 1606 [101][TOP] >UniRef100_UPI0000D56583 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit n=1 Tax=Tribolium castaneum RepID=UPI0000D56583 Length = 1619 Score = 122 bits (306), Expect = 1e-26 Identities = 59/117 (50%), Positives = 83/117 (70%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND+H M TYG+EAA I++EVQ VF+ YGI VDPRHLSLIAD+MT G + +R G+ Sbjct: 1503 NDIHKMAETYGIEAAMKIIVKEVQDVFNVYGIKVDPRHLSLIADYMTFNGTFEPLSRKGM 1562 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ESS SP +M+FE++ FL +AT+ G D+L +P++ L VG+ GTGC E++ ++ Sbjct: 1563 ESSASPLQQMTFESSLTFLRNATIGGKRDNLTNPSSCLMVGKPCVTGTGCFEVLHKM 1619 [102][TOP] >UniRef100_C4M3E6 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M3E6_ENTHI Length = 1570 Score = 122 bits (306), Expect = 1e-26 Identities = 55/118 (46%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV+A+L YGVEAAR ++ E+ SVF AYGI VDPRHL+L+AD+MT++G Y++ NR G Sbjct: 1450 TNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEGEYKSLNRSG 1509 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ + SPF K++FET+ FL + G D+L+SP+ + +G+ + GTG ++ ++ Sbjct: 1510 MDHNPSPFTKITFETSLGFLAKTCVSGQKDNLRSPSGSVVMGKNMVFGTGAFDIYTEL 1567 [103][TOP] >UniRef100_UPI0001867C20 hypothetical protein BRAFLDRAFT_129163 n=1 Tax=Branchiostoma floridae RepID=UPI0001867C20 Length = 1546 Score = 121 bits (304), Expect = 2e-26 Identities = 57/97 (58%), Positives = 76/97 (78%) Frame = -2 Query: 453 REVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLT 274 +E++ VF+ YGI VDPRHLSL+AD+MT++G Y+ NR GI+S+ SPF +MSFET+ FL Sbjct: 1449 QEIKEVFAVYGIEVDPRHLSLVADYMTYEGVYKPFNRTGIQSNASPFQQMSFETSMQFLK 1508 Query: 273 DATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +AT+ G+ DDLKSP+ARL GR V GTGC EL+Q + Sbjct: 1509 EATISGAKDDLKSPSARLVTGRPVMGGTGCFELLQPL 1545 [104][TOP] >UniRef100_Q6CIX4 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CIX4_KLULA Length = 1653 Score = 121 bits (304), Expect = 2e-26 Identities = 62/117 (52%), Positives = 82/117 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR G Sbjct: 1534 SNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGNYLAFNRQG 1593 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 +ESS S +KMS+ET FLT A L ++LKSP+A++ +G++ +GTG +L+ + Sbjct: 1594 MESSTSSLMKMSYETTCQFLTKAVLDNEHEELKSPSAKIVMGKLNGVGTGSFDLLSK 1650 [105][TOP] >UniRef100_C5DV78 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DV78_ZYGRC Length = 1667 Score = 121 bits (303), Expect = 3e-26 Identities = 62/118 (52%), Positives = 83/118 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR G Sbjct: 1546 SNDVAAVLRTYGVEAARNTIVYEINNVFSRYAISVSFRHLDLIADLMTRQGNYLAFNRQG 1605 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E+S S F+KMS+ET FLT A L + L+SP+AR+ +G++ +GTG +++ +I Sbjct: 1606 METSTSSFMKMSYETTCQFLTKAVLDNDREKLQSPSARIVLGKLNNVGTGAFDVLTKI 1663 [106][TOP] >UniRef100_A1CP71 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CP71_ASPCL Length = 1734 Score = 120 bits (302), Expect = 4e-26 Identities = 61/119 (51%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1615 TNSIHHMLTLYGVEAARASIVREMSDVFEGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1674 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S SP KMSFET FL DA + D+LKSP++R+ VGR +GTG +++ + Sbjct: 1675 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVVGRAGMVGTGAFDVLAPV 1733 [107][TOP] >UniRef100_B0XG16 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0XG16_CULQU Length = 1692 Score = 120 bits (301), Expect = 6e-26 Identities = 57/118 (48%), Positives = 87/118 (73%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++A+ TYG+EAA I++EVQ+VF YGI ++PRHL L+AD+MT G +++ +R G Sbjct: 1573 SNDIYAVAQTYGIEAASRVIVKEVQNVFKVYGIEINPRHLLLVADYMTADGTFKSLSRKG 1632 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E++VSP ++SFE++ FL ATL+G+ D L SP++RL VG++ + GTG L QI Sbjct: 1633 MEANVSPLQQISFESSIQFLKAATLKGNGDHLDSPSSRLMVGKLCKSGTGSFGLYNQI 1690 [108][TOP] >UniRef100_A7ARZ5 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7ARZ5_BABBO Length = 2016 Score = 120 bits (301), Expect = 6e-26 Identities = 61/117 (52%), Positives = 79/117 (67%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND+ + YG+EAARA+I+ E+Q+VFS YGI VD RHLSLIADFMT++G R NR G+ Sbjct: 1864 NDIATVYRYYGIEAARASIVSELQNVFSVYGINVDYRHLSLIADFMTNKGDIRTFNRYGM 1923 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 SP L+MSFE+ F+ DA RG DDL SPA + GR + LG G +++ QI Sbjct: 1924 ARHASPLLQMSFESTLKFIMDACERGGYDDLGSPAGAIVAGRPIRLGGGLCKVLPQI 1980 [109][TOP] >UniRef100_Q6FV16 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FV16_CANGA Length = 1643 Score = 120 bits (301), Expect = 6e-26 Identities = 59/119 (49%), Positives = 83/119 (69%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ ++L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1523 TSNDIASVLQTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1582 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+E+S S +KMS+ET FLT A L + L+SP+AR+ +G++ +GTG +++ ++ Sbjct: 1583 GMETSTSSLMKMSYETTCQFLTKAVLDNEREQLESPSARIVLGKLNNVGTGAFDILSKV 1641 [110][TOP] >UniRef100_C5DG15 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG15_LACTC Length = 1654 Score = 120 bits (301), Expect = 6e-26 Identities = 60/119 (50%), Positives = 83/119 (69%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV ++L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR Sbjct: 1532 TSNDVASVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1591 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+E+S S +KMS+ET FLT A L ++L SP+AR+ +G++ +GTG +++ ++ Sbjct: 1592 GMETSTSSLMKMSYETTCQFLTKAVLDNECENLDSPSARIVLGKLNNVGTGAFDVLAKV 1650 [111][TOP] >UniRef100_UPI00015B5184 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit n=1 Tax=Nasonia vitripennis RepID=UPI00015B5184 Length = 1694 Score = 119 bits (298), Expect = 1e-25 Identities = 61/125 (48%), Positives = 87/125 (69%), Gaps = 4/125 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ + TYG+EAA I++EV+ VF YGI VD RHLSLIAD+MT +G ++ +R G Sbjct: 1561 SNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDTRHLSLIADYMTFEGRFQPLSRKG 1620 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169 +E S SP +MSFE++ +FL +ATL+G DDL SP++RL +G+ GTG V++ Q Sbjct: 1621 MEDSASPLQQMSFESSLNFLKNATLQGKNDDLTSPSSRLMLGQPCNSGTGAFSLMVDIQQ 1680 Query: 168 QIGGL 154 QI L Sbjct: 1681 QISQL 1685 [112][TOP] >UniRef100_UPI00016E3D4E UPI00016E3D4E related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E3D4E Length = 1681 Score = 119 bits (297), Expect = 2e-25 Identities = 60/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 1563 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1622 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q + Sbjct: 1623 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1680 [113][TOP] >UniRef100_UPI00016E3D4D UPI00016E3D4D related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E3D4D Length = 1691 Score = 119 bits (297), Expect = 2e-25 Identities = 60/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 1573 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1632 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q + Sbjct: 1633 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1690 [114][TOP] >UniRef100_UPI00016E3D4C UPI00016E3D4C related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E3D4C Length = 1713 Score = 119 bits (297), Expect = 2e-25 Identities = 60/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 1595 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1654 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q + Sbjct: 1655 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1712 [115][TOP] >UniRef100_Q5CFH2 RNA polymerase A/beta'/A'' subunit n=1 Tax=Cryptosporidium hominis RepID=Q5CFH2_CRYHO Length = 472 Score = 119 bits (297), Expect = 2e-25 Identities = 60/110 (54%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG- 337 ND+ + YGVEAAR I+ E+++VFS YGI VD RHL+LI+D +T G R NR+G Sbjct: 306 NDIQTVYKYYGVEAARHCIINELRNVFSVYGINVDYRHLTLISDSITASGKLRVFNRMGT 365 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 I ++SPFL+MSFET+ FLT+A LRG++D+LKSPA+ + VG++V +GTG Sbjct: 366 ISYNISPFLQMSFETSMKFLTEACLRGALDNLKSPASSISVGKMVSVGTG 415 [116][TOP] >UniRef100_Q6MYA4 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus RepID=Q6MYA4_ASPFU Length = 1692 Score = 119 bits (297), Expect = 2e-25 Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1573 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1632 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ + Sbjct: 1633 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1691 [117][TOP] >UniRef100_Q4WS60 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus RepID=Q4WS60_ASPFU Length = 1680 Score = 119 bits (297), Expect = 2e-25 Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1561 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1620 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ + Sbjct: 1621 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1679 [118][TOP] >UniRef100_Q4PB85 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4PB85_USTMA Length = 1795 Score = 119 bits (297), Expect = 2e-25 Identities = 61/114 (53%), Positives = 76/114 (66%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ A+L TYGVEAARA I+ E++ +F YGI V PRHL LIAD+ T GG+R NR G Sbjct: 1670 TNDIGAVLHTYGVEAARAAIVAEMRGIFDTYGIAVSPRHLFLIADYQTAAGGFRPFNRSG 1729 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 I S S LK SFE F+ + L G VD LK+P+++L VGR V GTG E+ Sbjct: 1730 ISESSSTLLKASFEMTMAFIGGSALHGEVDMLKTPSSKLVVGRPVNSGTGTPEI 1783 [119][TOP] >UniRef100_B0XRP3 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus A1163 RepID=B0XRP3_ASPFC Length = 1680 Score = 119 bits (297), Expect = 2e-25 Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1561 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1620 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ + Sbjct: 1621 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1679 [120][TOP] >UniRef100_A1D226 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D226_NEOFI Length = 1681 Score = 119 bits (297), Expect = 2e-25 Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1562 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1621 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ + Sbjct: 1622 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1680 [121][TOP] >UniRef100_B9QJU7 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG RepID=B9QJU7_TOXGO Length = 2676 Score = 118 bits (295), Expect = 3e-25 Identities = 60/109 (55%), Positives = 79/109 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G Sbjct: 2438 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2497 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190 + +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+ Sbjct: 2498 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2546 [122][TOP] >UniRef100_B9PNT4 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PNT4_TOXGO Length = 2626 Score = 118 bits (295), Expect = 3e-25 Identities = 60/109 (55%), Positives = 79/109 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G Sbjct: 2388 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2447 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190 + +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+ Sbjct: 2448 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2496 [123][TOP] >UniRef100_B6KG86 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KG86_TOXGO Length = 2768 Score = 118 bits (295), Expect = 3e-25 Identities = 60/109 (55%), Positives = 79/109 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G Sbjct: 2530 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2589 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190 + +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+ Sbjct: 2590 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2638 [124][TOP] >UniRef100_UPI00017B5891 UPI00017B5891 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B5891 Length = 1708 Score = 117 bits (294), Expect = 4e-25 Identities = 59/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 1590 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 1649 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG++V+ GTG EL Q + Sbjct: 1650 IRSNSSPLQQMTFETSYKFIKQATMLGSHDRLASPSASLVVGKLVKGGTGLFELKQPL 1707 [125][TOP] >UniRef100_Q23DD6 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23DD6_TETTH Length = 1727 Score = 117 bits (294), Expect = 4e-25 Identities = 53/118 (44%), Positives = 83/118 (70%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ A+ YG+EAAR I++E+ +VF YG+ VD RHL LIAD++T G +A NR+ Sbjct: 1610 SNDIAALNKCYGIEAARNAIVKEIVTVFGVYGVVVDYRHLYLIADYLTFSGEMKAMNRVW 1669 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ S+SPFLKMSFET FLT+A +D L +P++ + +GRV ++GTG +++ ++ Sbjct: 1670 MDESISPFLKMSFETCVKFLTNAATNNEIDTLSTPSSSIVLGRVPQVGTGVFDILHKV 1727 [126][TOP] >UniRef100_Q16K29 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16K29_AEDAE Length = 1686 Score = 117 bits (294), Expect = 4e-25 Identities = 55/122 (45%), Positives = 87/122 (71%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++A+ TYG+EAA I++EVQ+VF YGI ++PRHL L+AD+MT G +++ +R G Sbjct: 1565 SNDIYAIAQTYGIEAAARVIVKEVQNVFKVYGITINPRHLLLVADYMTADGTFKSMSRKG 1624 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 +ES+VSP ++SFE++ FL A L+G+ D L SP++RL VG++ + GTG + ++ Sbjct: 1625 MESNVSPLQQISFESSIQFLKAAALKGNGDHLDSPSSRLMVGQLCKSGTGAFSVYSKVQA 1684 Query: 156 LA 151 A Sbjct: 1685 AA 1686 [127][TOP] >UniRef100_Q0D0E1 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0D0E1_ASPTN Length = 1691 Score = 117 bits (293), Expect = 5e-25 Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G Sbjct: 1572 TNSIHHMLQFYGVEAARASIVREMSDVFEGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1631 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ SPF KMSFET FL +A + D+L+SP++R+ VGR +GTG +++ + Sbjct: 1632 LVKDGTSPFAKMSFETTVGFLKEAVIERDFDNLRSPSSRIVVGRPGIVGTGAFDVLAPV 1690 [128][TOP] >UniRef100_B4P775 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4P775_DROYA Length = 1642 Score = 117 bits (292), Expect = 6e-25 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKI 1641 [129][TOP] >UniRef100_B4LLN1 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4LLN1_DROVI Length = 1648 Score = 117 bits (292), Expect = 6e-25 Identities = 60/118 (50%), Positives = 81/118 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1530 SNDIHAIARTYGIEAANQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1589 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL +A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1590 MEHSSSPLQQMSFESSLQFLRNAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTKI 1647 [130][TOP] >UniRef100_P91875 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Drosophila melanogaster RepID=RPA1_DROME Length = 1642 Score = 117 bits (292), Expect = 6e-25 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKI 1641 [131][TOP] >UniRef100_UPI000180C7E3 PREDICTED: similar to RNA polymerase I large subunit n=1 Tax=Ciona intestinalis RepID=UPI000180C7E3 Length = 1547 Score = 116 bits (291), Expect = 8e-25 Identities = 58/122 (47%), Positives = 83/122 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N VH++ YG+EAAR +++E+ +VF+ YGI VD RHL+LI D+M ++G Y+ NR+ Sbjct: 1426 SNCVHSVAQMYGIEAARRVVVKEIANVFAVYGIEVDQRHLNLIGDYMCYEGVYKPFNRMA 1485 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 IES VSP +MSFET FL A L G D L+SP+AR+ G+VV+ GTG L+ + Sbjct: 1486 IESCVSPLQQMSFETTMKFLNSAALYGLQDRLQSPSARIVTGQVVKGGTGNFSLLCPVAK 1545 Query: 156 LA 151 +A Sbjct: 1546 MA 1547 [132][TOP] >UniRef100_Q291D4 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q291D4_DROPS Length = 1647 Score = 116 bits (291), Expect = 8e-25 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1529 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1588 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G DDL SP++RL VG V GTG +L+ +I Sbjct: 1589 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDDLNSPSSRLMVGLPVRNGTGAFDLLTKI 1646 [133][TOP] >UniRef100_B4GAV6 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4GAV6_DROPE Length = 1647 Score = 116 bits (291), Expect = 8e-25 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1529 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1588 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G DDL SP++RL VG V GTG +L+ +I Sbjct: 1589 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDDLNSPSSRLMVGLPVRNGTGAFDLLTKI 1646 [134][TOP] >UniRef100_B8N4P4 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8N4P4_ASPFN Length = 1673 Score = 116 bits (291), Expect = 8e-25 Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+R NR G Sbjct: 1554 TNSIHHMLNLYGVEAARASIVREMTEVFEGHSISVDNRHLNLIGDVMTQSGGFRPFNRNG 1613 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ + SP KMSFET FL DA D+LKSP++R+ VGRV +GTG +++ + Sbjct: 1614 LVKDASSPLAKMSFETTVGFLRDAVQERDYDNLKSPSSRIVVGRVGTVGTGAFDVLAPV 1672 [135][TOP] >UniRef100_B4QFV8 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans RepID=B4QFV8_DROSI Length = 1642 Score = 116 bits (290), Expect = 1e-24 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDELSSPSSRLMVGLPVRNGTGAFELLTKI 1641 [136][TOP] >UniRef100_B4MRK4 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MRK4_DROWI Length = 1649 Score = 116 bits (290), Expect = 1e-24 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1531 SNDIHAIARTYGIEAAAQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1590 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1591 MEHSSSPLQQMSFESSLQFLRSAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTKI 1648 [137][TOP] >UniRef100_B4KP10 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KP10_DROMO Length = 1649 Score = 116 bits (290), Expect = 1e-24 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1531 SNDIHAIARTYGIEAATQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1590 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1591 MEHSSSPLQQMSFESSLQFLRSAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTRI 1648 [138][TOP] >UniRef100_B4HRE8 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia RepID=B4HRE8_DROSE Length = 1585 Score = 116 bits (290), Expect = 1e-24 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1467 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1526 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1527 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDELSSPSSRLMVGLPVRNGTGAFELLTKI 1584 [139][TOP] >UniRef100_B3NR27 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NR27_DROER Length = 1642 Score = 116 bits (290), Expect = 1e-24 Identities = 59/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ ++ Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKL 1641 [140][TOP] >UniRef100_B3MEH6 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MEH6_DROAN Length = 1643 Score = 116 bits (290), Expect = 1e-24 Identities = 60/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1525 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1584 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I Sbjct: 1585 MEHSSSPLQQMSFESSLQFLRSAAGFGRQDELNSPSSRLMVGLPVRNGTGAFELLTKI 1642 [141][TOP] >UniRef100_UPI0000DB7146 PREDICTED: similar to RNA polymerase I subunit CG10122-PA n=1 Tax=Apis mellifera RepID=UPI0000DB7146 Length = 1665 Score = 115 bits (289), Expect = 1e-24 Identities = 56/118 (47%), Positives = 85/118 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++++ TYG+EAA I++EV+ VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 1538 SNDIYSISQTYGIEAANRVIIKEVRDVFKMYGITVDSRHLSLIADYMTFDGRFQPLSRKG 1597 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ +FL +A L+G D+L+SP++RL +G+ + GTG L+ +I Sbjct: 1598 MEESASPLQQMSFESSLNFLKNAALQGKRDNLESPSSRLMLGQPCKSGTGICSLLVKI 1655 [142][TOP] >UniRef100_B4J683 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4J683_DROGR Length = 903 Score = 114 bits (286), Expect = 3e-24 Identities = 59/118 (50%), Positives = 80/118 (67%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G Sbjct: 785 SNDIHAIARTYGIEAAAQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 844 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 +E S SP +MSFE++ FL +A G D L SP++RL VG V GTG EL+ ++ Sbjct: 845 MEHSSSPLQQMSFESSLQFLRNAAGFGRPDQLNSPSSRLMVGLPVRNGTGAFELLTKM 902 [143][TOP] >UniRef100_B8C4Z8 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C4Z8_THAPS Length = 1671 Score = 114 bits (284), Expect = 5e-24 Identities = 55/115 (47%), Positives = 76/115 (66%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ + YGVEAAR +I +++ VF+ YGI VDPRHLSLIADFMT+ G Y+ NRIG Sbjct: 1554 SNDIWGIRCAYGVEAARMSIADQIRGVFAVYGISVDPRHLSLIADFMTYDGEYKPMNRIG 1613 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + S FL+MSFE+ + F+ DA L D + SP+A + +G + GTG E + Sbjct: 1614 MADISSTFLQMSFESTSVFMVDAALHKRNDPMMSPSANIVMGHPIRHGTGAFECI 1668 [144][TOP] >UniRef100_B6AA07 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AA07_9CRYT Length = 1981 Score = 113 bits (283), Expect = 7e-24 Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ + YG+EAAR ++ E+ +VF+ YGI VD RHLSLI D +T G R +R+G Sbjct: 1837 SNDIQTVYKYYGIEAARKCLINELTNVFAVYGINVDYRHLSLIGDTVTFSGSIRVFSRVG 1896 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 + S SPFL+MSFET+ FL DA RG++D LKSPA+ + VG++ +GTG Sbjct: 1897 NVAHSTSPFLQMSFETSIKFLADACSRGAIDSLKSPASSISVGKICSVGTG 1947 [145][TOP] >UniRef100_A2QRS4 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QRS4_ASPNC Length = 1680 Score = 113 bits (283), Expect = 7e-24 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML YGVEAARA+I++E+ VF + I VD RHL+LI D MT GG+R NR G Sbjct: 1561 TNSIHDMLNLYGVEAARASIVKEMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRPFNRNG 1620 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ SP KMSFET +L +A + D+LKSP+AR+ VGR +GTG +++ + Sbjct: 1621 LVKDGSSPLAKMSFETTVGYLKEAVVERDFDNLKSPSARIVVGRTGTVGTGAFDVLAPV 1679 [146][TOP] >UniRef100_Q4UI00 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UI00_THEAN Length = 1999 Score = 112 bits (281), Expect = 1e-23 Identities = 58/117 (49%), Positives = 76/117 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 NDV + YG+EAAR+ I+ E+Q VFS YGI VD RHL+LIADFMT +G R R G+ Sbjct: 1864 NDVATVFKYYGIEAARSCIVSELQKVFSVYGIKVDYRHLTLIADFMTQKGDVRTFTRYGM 1923 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 SP L+MSFE+ FL DA+ RG+ D+LKSPA L G+ V +G+ L+ + Sbjct: 1924 ARHTSPLLQMSFESTMKFLMDASERGAYDNLKSPAGGLMTGKPVHVGSSLCRLMHVV 1980 [147][TOP] >UniRef100_UPI000187F52A hypothetical protein MPER_15635 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187F52A Length = 108 Score = 111 bits (278), Expect = 3e-23 Identities = 54/103 (52%), Positives = 71/103 (68%) Frame = -2 Query: 471 ARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFET 292 ARA I+RE+ VF AYGI VD RHL LIAD+MT +GGY+ NR GI ++ SP LK S+ET Sbjct: 2 ARAAILREMSGVFGAYGIQVDRRHLELIADYMTFEGGYKPFNRKGISANPSPLLKASYET 61 Query: 291 AAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 A FL+DATL G DDL +P+ + +GR GTG +++ + Sbjct: 62 TAAFLSDATLHGDFDDLSTPSGNIVLGRPNHTGTGAFDVLMPL 104 [148][TOP] >UniRef100_Q4N7L1 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N7L1_THEPA Length = 1996 Score = 110 bits (276), Expect = 4e-23 Identities = 57/117 (48%), Positives = 76/117 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 NDV +L YG+EAAR+ I+ E+Q VFS YGI V+ RHL+LIADFMT +G R R G+ Sbjct: 1861 NDVATVLKYYGIEAARSCIVSELQKVFSVYGIKVNYRHLTLIADFMTQKGDVRTFTRYGM 1920 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 SP L+MSFE+ FL A+ RG+ D+LKSPA L G+ V +G+ L+ + Sbjct: 1921 AKHTSPLLQMSFESTMKFLMQASQRGAYDNLKSPAGGLMAGKPVHVGSSLCRLMHVV 1977 [149][TOP] >UniRef100_UPI0000E46841 PREDICTED: similar to RNA polymerase I large subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E46841 Length = 1742 Score = 110 bits (275), Expect = 6e-23 Identities = 53/87 (60%), Positives = 69/87 (79%) Frame = -2 Query: 450 EVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTD 271 EV+ VFS YGI VDPRHLSL++D+MT +G YR NRIG+ES+ SP KM+FE+ FL + Sbjct: 1656 EVRDVFSVYGITVDPRHLSLVSDYMTFEGVYRPFNRIGLESNASPIQKMTFESCMRFLRE 1715 Query: 270 ATLRGSVDDLKSPAARLCVGRVVELGT 190 AT++G+ D+L+SP+ARL VGRVV GT Sbjct: 1716 ATIQGAKDNLQSPSARLVVGRVVNGGT 1742 [150][TOP] >UniRef100_C4Q0S7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4Q0S7_SCHMA Length = 1784 Score = 109 bits (272), Expect = 1e-22 Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ M TYG+EAARA + REV VF YGI V+ RHLSLI+D++T G Y A NR Sbjct: 1664 TNNITVMNETYGIEAARAALQREVSGVFGHYGIHVNSRHLSLISDYLTKFGVYHAFNRRS 1723 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE-LGTGCVELVQQI 163 + S SP +M+FET A+ L + S+D+L SP+A L GR+V GT C EL+Q++ Sbjct: 1724 MSSHPSPIQQMTFETVANVLKHSLQNDSMDNLVSPSASLVAGRIVHYAGTNCFELLQKL 1782 [151][TOP] >UniRef100_A2FYC2 DNA-directed RNA polymerase I 190 kDa polypeptide-related protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2FYC2_TRIVA Length = 370 Score = 108 bits (270), Expect = 2e-22 Identities = 54/115 (46%), Positives = 76/115 (66%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YG+EAAR I++EV SVF Y I VD RHLSLIADF+T+ G + +R Sbjct: 252 TNDIAIILKHYGIEAARMAIIKEVNSVFKNYMIDVDMRHLSLIADFVTNSGDWLGMSRHT 311 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 ++ SP +MSFET FLT T+ G D ++SP+A L G V+++G+G E++ Sbjct: 312 MKKCASPLQQMSFETTTAFLTQCTMHGGKDMMESPSASLTAGNVIKMGSGLCEIL 366 [152][TOP] >UniRef100_A2DXG9 DNA-directed RNA polymerase I 190 kDa polypeptide-related protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2DXG9_TRIVA Length = 257 Score = 108 bits (269), Expect = 3e-22 Identities = 54/115 (46%), Positives = 76/115 (66%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ +L YG+EAAR I++EV SVF Y I VD RHLSLIADF+T+ G + +R Sbjct: 139 TNDIAIILKHYGIEAARMAIIKEVNSVFKNYMIDVDMRHLSLIADFVTNTGDWLGMSRHT 198 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 ++ SP +MSFET FLT T+ G D ++SP+A L G V+++G+G E++ Sbjct: 199 MKKCASPLQQMSFETTTAFLTQCTMHGGKDMMESPSASLTAGNVIKMGSGLCEIL 253 [153][TOP] >UniRef100_UPI000186D8C3 DNA-directed RNA polymerase I largest subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D8C3 Length = 1659 Score = 107 bits (268), Expect = 4e-22 Identities = 52/115 (45%), Positives = 75/115 (65%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV+ ++ T G+EA I++E+ VF YGI VD RHL L+AD+MT+QG Y NRIG Sbjct: 1540 SNDVNKVVETLGIEAGVRIIVKELNDVFGVYGITVDHRHLLLVADYMTNQGNYSPFNRIG 1599 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + S SP +MSFE + FL + +R D + SP+AR+ GR + GTGC +++ Sbjct: 1600 LADSSSPLQQMSFERSTGFLKKSLVRNQEDFMNSPSARIMAGRFCKSGTGCFDVM 1654 [154][TOP] >UniRef100_Q4SFA8 DNA-directed RNA polymerase n=1 Tax=Tetraodon nigroviridis RepID=Q4SFA8_TETNG Length = 1949 Score = 107 bits (266), Expect = 6e-22 Identities = 52/105 (49%), Positives = 73/105 (69%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 1558 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 1617 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVV 202 I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+++ Sbjct: 1618 IRSNSSPLQQMTFETSYKFIKQATMLGSHDRLASPSASLVVGKLL 1662 [155][TOP] >UniRef100_B6HAC6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HAC6_PENCW Length = 1671 Score = 106 bits (265), Expect = 8e-22 Identities = 55/119 (46%), Positives = 77/119 (64%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H ML YGVEAAR TI+RE+ +VF + I VD RHL+LI D MT G ++A +R G Sbjct: 1552 TNSIHDMLNLYGVEAARGTIVREMDAVFKGHSISVDNRHLNLIGDVMTQSGSFKAFSRNG 1611 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ + S F + SFET L D L D+LKSP++R+ VGRV +GTG +++ + Sbjct: 1612 LVKDASSAFARASFETTVGALKDVVLERGNDNLKSPSSRIVVGRVGTVGTGSFDILAPV 1670 [156][TOP] >UniRef100_A8QBY2 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QBY2_MALGO Length = 1673 Score = 106 bits (264), Expect = 1e-21 Identities = 54/110 (49%), Positives = 73/110 (66%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ A+L YGVEAARA I+ E++ +F YGIGV RH+ LIAD+ T G +R +R G Sbjct: 1552 SNDIGALLYCYGVEAARAAIVSELKGIFDTYGIGVSMRHMFLIADYQTAFGDFRPFSRGG 1611 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 + + SP LK SFE FL+ A+L +DDL SP++ + VGR V GTG Sbjct: 1612 LADAPSPLLKASFEMTMAFLSGASLFQEMDDLTSPSSNIVVGRPVRSGTG 1661 [157][TOP] >UniRef100_Q4YXG8 DNA-directed RNA polymerase n=1 Tax=Plasmodium berghei RepID=Q4YXG8_PLABE Length = 2577 Score = 105 bits (262), Expect = 2e-21 Identities = 51/119 (42%), Positives = 77/119 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ NR GI Sbjct: 2457 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFNRYGI 2516 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 + + F KMSFE A F+ ++ S+D L +P++ L G+ +++GT +V I G Sbjct: 2517 NAYRNVFHKMSFECATSFMIQGCIQNSIDYLSTPSSSLFFGKHIKVGTNVSNIVTCIKG 2575 [158][TOP] >UniRef100_A0DJB3 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=A0DJB3_PARTE Length = 1696 Score = 105 bits (262), Expect = 2e-21 Identities = 51/116 (43%), Positives = 80/116 (68%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND+ A++ +G+EAAR I++E+ +VF AYG+ VD RHL LIAD+MT G RA NRI + Sbjct: 1576 NDIVAIMNAFGIEAARNAIIKEILAVFGAYGVAVDYRHLYLIADYMTFGGQIRAMNRIYM 1635 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + +PF KM+FET+ FLT+A L D + +++L +GRV ++G+ +++ Q Sbjct: 1636 DFNTAPFGKMTFETSTQFLTNACLNRETDTFNNLSSQLVIGRVPKVGSNLCDVLYQ 1691 [159][TOP] >UniRef100_Q7RJK4 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RJK4_PLAYO Length = 2594 Score = 103 bits (258), Expect = 5e-21 Identities = 50/117 (42%), Positives = 76/117 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ NR G+ Sbjct: 2474 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFNRYGM 2533 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + + F KMSFE A F+ ++ SVD L +P++ L G+ +++GT +V I Sbjct: 2534 AACRNVFHKMSFECATTFMIQGCIQNSVDYLSTPSSSLFFGKHIKVGTNVSNIVTSI 2590 [160][TOP] >UniRef100_B3L6H5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L6H5_PLAKH Length = 2592 Score = 103 bits (258), Expect = 5e-21 Identities = 51/119 (42%), Positives = 77/119 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ +R G+ Sbjct: 2472 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFSRHGL 2531 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 + F KMSFE A +FLT + SVD L + ++ L G+ +++GT ++V I G Sbjct: 2532 GCFRNVFHKMSFECATNFLTQGCVHNSVDYLSTASSSLFFGKPIKVGTNVADIVTHIEG 2590 [161][TOP] >UniRef100_A5KB21 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5KB21_PLAVI Length = 2695 Score = 103 bits (258), Expect = 5e-21 Identities = 51/119 (42%), Positives = 77/119 (64%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ +R G+ Sbjct: 2575 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFSRHGL 2634 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157 + F KMSFE A +FLT + SVD L + ++ L G+ +++GT ++V I G Sbjct: 2635 GCFRNVFHKMSFECATNFLTQGCVHNSVDYLSTASSSLFFGKPIKVGTNVADIVTHIEG 2693 [162][TOP] >UniRef100_Q8I410 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I410_PLAF7 Length = 2914 Score = 102 bits (255), Expect = 1e-20 Identities = 50/114 (43%), Positives = 75/114 (65%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++A++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G +A NR G+ Sbjct: 2793 NDIYAIVKTYGIEAGRLCITKELKKVFDAYGIQIDFRHLSFISDFMTHTGDLKAFNRHGL 2852 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + F KMSFE A +FL + S+D L + ++ L G+ +++GT ++V Sbjct: 2853 GYFRNVFHKMSFECATNFLIQGCIHNSIDYLSTASSSLFFGKHIKVGTNLADIV 2906 [163][TOP] >UniRef100_Q26008 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum RepID=Q26008_PLAFA Length = 2910 Score = 102 bits (255), Expect = 1e-20 Identities = 50/114 (43%), Positives = 75/114 (65%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 ND++A++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G +A NR G+ Sbjct: 2792 NDIYAIVKTYGIEAGRLCITKELKKVFDAYGIQIDFRHLSFISDFMTHTGDLKAFNRHGL 2851 Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + F KMSFE A +FL + S+D L + ++ L G+ +++GT ++V Sbjct: 2852 GYFRNVFHKMSFECATNFLIQGCIHNSIDYLSTASSSLFFGKHIKVGTNLADIV 2905 [164][TOP] >UniRef100_UPI0000220D7C Hypothetical protein CBG20734 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000220D7C Length = 1723 Score = 100 bits (250), Expect = 5e-20 Identities = 52/115 (45%), Positives = 73/115 (63%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR Sbjct: 1584 SNDLNLILENYGVEACAKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1643 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + SS SP KM+FET FL +A L+G D++ SP+AR+ +G + GTG +L+ Sbjct: 1644 MSSSSSPLQKMTFETTMAFLREALLQGEEDNVNSPSARIVMGALPRGGTGSFDLI 1698 [165][TOP] >UniRef100_A8XYH3 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8XYH3_CAEBR Length = 1764 Score = 100 bits (250), Expect = 5e-20 Identities = 52/115 (45%), Positives = 73/115 (63%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR Sbjct: 1625 SNDLNLILENYGVEACAKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1684 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + SS SP KM+FET FL +A L+G D++ SP+AR+ +G + GTG +L+ Sbjct: 1685 MSSSSSPLQKMTFETTMAFLREALLQGEEDNVNSPSARIVMGALPRGGTGSFDLI 1739 [166][TOP] >UniRef100_O17628 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=O17628_CAEEL Length = 1737 Score = 100 bits (249), Expect = 6e-20 Identities = 53/115 (46%), Positives = 72/115 (62%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR Sbjct: 1597 SNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1656 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + SS SP KM+FET FL +A L G D++ SP+ARL +G + GTG +L+ Sbjct: 1657 MSSSSSPLQKMTFETTMAFLREALLHGEEDNVNSPSARLVMGALPRGGTGSFDLL 1711 [167][TOP] >UniRef100_B7Z284 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z284_HUMAN Length = 1207 Score = 100 bits (249), Expect = 6e-20 Identities = 46/87 (52%), Positives = 63/87 (72%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G Sbjct: 1107 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1166 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256 I S+ SP +M+FET+ FL AT+ G Sbjct: 1167 IRSNSSPLQQMTFETSFQFLKQATMLG 1193 [168][TOP] >UniRef100_Q8SS15 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SS15_ENCCU Length = 1395 Score = 99.4 bits (246), Expect = 1e-19 Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ + +T GVEAAR I+ EV VF YGI +D RHL LIAD+MT +G Y +R G Sbjct: 1272 SNDIYDVYLTLGVEAARHAIINEVVKVFDVYGISIDIRHLLLIADYMTRKGSYSPFSRHG 1331 Query: 336 IESSVSPFLKMSFETA-AHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + + SP ++SFE+ ++F T AT D L +P+A L VG V GTGC +L+ I Sbjct: 1332 LGADDSPIQRISFESCYSNFKTAATFH-LEDKLSNPSASLTVGNPVRCGTGCFDLIHNI 1389 [169][TOP] >UniRef100_C6LRR9 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LRR9_GIALA Length = 2144 Score = 94.0 bits (232), Expect = 6e-18 Identities = 49/118 (41%), Positives = 69/118 (58%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN+++ + YG+EAAR++I+ E+ VFS Y I VD RHLSLIAD MT G R NR+ Sbjct: 2027 TNNINQIFEIYGIEAARSSIIEEIHRVFSTYHIEVDERHLSLIADSMTLSGCVRGLNRLE 2086 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + LK SFE+A + L D L++PA + VG+ GTG +L+ Q+ Sbjct: 2087 MRHQTEEILKASFESACTSIAAGALTSGFDSLRAPAGAVTVGQYPFQGTGSFDLLSQL 2144 [170][TOP] >UniRef100_A8B7R7 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B7R7_GIALA Length = 2142 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/118 (42%), Positives = 66/118 (55%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + YG+EAAR I+ E+ VFS Y I VD RHLSLIAD MT G R NR+ Sbjct: 2025 TNNISQIFEIYGIEAARNAIIEEIHRVFSTYHIEVDERHLSLIADSMTLSGCVRGLNRLE 2084 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + LK SFE+A L L D L++PA + VG+ GTG +L+ Q+ Sbjct: 2085 MRHQTEELLKASFESACTSLAAGALTSGFDSLRAPAGAVTVGQYPSQGTGSFDLLTQL 2142 [171][TOP] >UniRef100_Q2GP10 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GP10_CHAGB Length = 1475 Score = 92.4 bits (228), Expect = 2e-17 Identities = 42/74 (56%), Positives = 56/74 (75%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TND+ +L YGVEA R+ I+ E+ VF+ +GI VDPRHL+LIAD+MT GG+ A NRI Sbjct: 1388 STNDIAQVLEVYGVEACRSNIVAELSGVFAGHGIAVDPRHLNLIADYMTRNGGFSAFNRI 1447 Query: 339 GIESSVSPFLKMSF 298 G+ +VSPF KMS+ Sbjct: 1448 GLTGNVSPFTKMSY 1461 [172][TOP] >UniRef100_UPI00017B50E6 UPI00017B50E6 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B50E6 Length = 192 Score = 91.7 bits (226), Expect = 3e-17 Identities = 43/87 (49%), Positives = 60/87 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 103 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 162 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256 I S+ SP +M+FET+ F+ AT+ G Sbjct: 163 IRSNSSPLQQMTFETSYKFIKQATMLG 189 [173][TOP] >UniRef100_Q4TEZ8 Chromosome undetermined SCAF4966, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TEZ8_TETNG Length = 163 Score = 91.7 bits (226), Expect = 3e-17 Identities = 43/87 (49%), Positives = 60/87 (68%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR Sbjct: 76 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 135 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256 I S+ SP +M+FET+ F+ AT+ G Sbjct: 136 IRSNSSPLQQMTFETSYKFIKQATMLG 162 [174][TOP] >UniRef100_A8Q5K0 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8Q5K0_BRUMA Length = 1687 Score = 91.3 bits (225), Expect = 4e-17 Identities = 45/115 (39%), Positives = 72/115 (62%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND++ M YG+EA +++E+ VF+ YGI V+ RHL+L AD+MT G + +R Sbjct: 1560 SNDLNMMCNNYGIEACGRALVKEIIRVFTPYGIDVNWRHLTLAADYMTFTGRIQPFSRGA 1619 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + S SP +M+FET F+ DA + G D L SP++RL +G ++ GTG +++ Sbjct: 1620 MSLSASPLQRMTFETTIAFMRDALINGDDDHLMSPSSRLVIGGLLRGGTGIFDVM 1674 [175][TOP] >UniRef100_A9BKN5 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BKN5_9CRYP Length = 1496 Score = 90.5 bits (223), Expect = 6e-17 Identities = 42/117 (35%), Positives = 76/117 (64%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND++A++ YG+EAAR T++RE+ ++F I ++ HL LI+D++T G +R +R G Sbjct: 1380 TNDIYALMNRYGIEAARETLVRELNTIFQIQSILINYHHLDLISDYITRLGNFRPFSRKG 1439 Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 I SP K+++ETA FL + +L +D L S + + +G++ ++GTG +++ + Sbjct: 1440 I-CEESPLQKITYETALEFLINFSLNKQIDFLDSASGSISLGKICKMGTGTFDIISR 1495 [176][TOP] >UniRef100_B7XHV6 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XHV6_ENTBH Length = 1270 Score = 90.5 bits (223), Expect = 6e-17 Identities = 46/119 (38%), Positives = 69/119 (57%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND++A+ + G+EA R TI+ E+++VF YGI + HL LIAD+M H G Y+ NR Sbjct: 1150 TSNDIYAIFLHLGIEACRITIINEIKAVFDIYGIIISEEHLELIADYMCHNGTYQPFNRY 1209 Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + S KMSFE+ + +A D + P+A + VG ++ GTG EL+ I Sbjct: 1210 TFNMNDSIIQKMSFESCFKNIKEAVTFQLKDKISVPSANITVGNKIQNGTGLFELLYNI 1268 [177][TOP] >UniRef100_Q976A6 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus tokodaii RepID=RPOA2_SULTO Length = 392 Score = 90.1 bits (222), Expect = 8e-17 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++H + T+G+EAAR I RE++ V G+ VD RH+ L+AD MT G R R G Sbjct: 271 TNNIHEIADTFGIEAAREAIAREIKKVLEEQGLDVDMRHILLVADIMTRTGVVRQIGRHG 330 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + S L + +FE L DA RG +++ K + +G+ + LGTG VEL ++ Sbjct: 331 VTGEKSSVLARAAFEVTVKHLLDAAARGEMEEFKGVVENIIIGQPIRLGTGIVELTMRL 389 [178][TOP] >UniRef100_UPI00003C8496 DNA-directed RNA polymerase subunit A'''''''' n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI00003C8496 Length = 504 Score = 88.6 bits (218), Expect = 2e-16 Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+ + +G+EAAR I RE ++ S G+ VD RHL L+AD MT G RA R Sbjct: 382 TTNDIIEIENVFGIEAARNAIYREAENTLSEQGLNVDKRHLMLVADMMTFSGAVRAVGRQ 441 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI S L + +FE + L A L G +D L A + VG+ + LGTG ++LV Sbjct: 442 GISGRKSSVLARAAFEITSKHLLKAGLLGEIDPLAGVAENIIVGQPITLGTGAIDLV 498 [179][TOP] >UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi RepID=Q8MX30_NAEGR Length = 1590 Score = 87.0 bits (214), Expect = 7e-16 Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+NDV+ +L G+EA R +MRE++ V G V+ RHL+++ D MTH+GG A R Sbjct: 1313 TSNDVNEILDVLGIEACRNALMREMRKVIEFDGSYVNYRHLAILCDVMTHRGGLMAITRR 1372 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI S P ++ SFE L +A D LK +A + VG++ +GTGC L Sbjct: 1373 GINRSDTGPLMRCSFEETVEILIEAATFADTDTLKGVSANVMVGQLAPIGTGCFGL 1428 [180][TOP] >UniRef100_Q3SE61 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=Q3SE61_PARTE Length = 1751 Score = 86.3 bits (212), Expect = 1e-15 Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TT+DV+ + G+EAARA ++ E + +F+ YGI ++ RHL L+ D+MTH+G A NR Sbjct: 1413 TTDDVYEISQVLGIEAARAALVGETRKIFNHYGIYINYRHLYLLYDWMTHRGRLTAVNRN 1472 Query: 339 GIE--SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI VS K SFE L DA + +D ++ + + G++ GTGC EL+ Sbjct: 1473 GINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530 [181][TOP] >UniRef100_A0BYP5 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=A0BYP5_PARTE Length = 1750 Score = 86.3 bits (212), Expect = 1e-15 Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TT+DV+ + G+EAARA ++ E + +F+ YGI ++ RHL L+ D+MTH+G A NR Sbjct: 1413 TTDDVYEISQVLGIEAARAALVGETRKIFNHYGIYINYRHLYLLYDWMTHRGRLTAVNRN 1472 Query: 339 GIE--SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI VS K SFE L DA + +D ++ + + G++ GTGC EL+ Sbjct: 1473 GINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530 [182][TOP] >UniRef100_O28390 DNA-directed RNA polymerase subunit A'' n=1 Tax=Archaeoglobus fulgidus RepID=RPOA2_ARCFU Length = 380 Score = 86.3 bits (212), Expect = 1e-15 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 1/122 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN+++ + G+EAAR I+RE G+ VD RH+ L+AD MT G R R Sbjct: 257 TTNNIYEIYEVLGIEAARNAIIREALDTLEEQGLEVDVRHIMLVADVMTADGELRQIGRH 316 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ L + +FE + L DA +RG D L+ + VG+ ++LGTG VELV ++ Sbjct: 317 GVAGEKQSILARAAFEMTVNNLLDAAVRGEEDHLRGITENIIVGQPIKLGTGDVELVLKM 376 Query: 162 GG 157 GG Sbjct: 377 GG 378 [183][TOP] >UniRef100_UPI0000E46840 PREDICTED: similar to RNA polymerase I large subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E46840 Length = 73 Score = 85.5 bits (210), Expect = 2e-15 Identities = 40/72 (55%), Positives = 55/72 (76%) Frame = -2 Query: 378 MTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE 199 MT +G YR NRIG+ES+ SP KM+FE+ FL +AT++G+ D+L+SP+ARL VGRVV Sbjct: 1 MTFEGVYRPFNRIGLESNASPIQKMTFESCMRFLREATIQGAKDNLQSPSARLVVGRVVN 60 Query: 198 LGTGCVELVQQI 163 GTGC +L+Q + Sbjct: 61 GGTGCFDLIQPL 72 [184][TOP] >UniRef100_A5ULN5 DNA-dependent RNA polymerase, subunit A, RpoA n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5ULN5_METS3 Length = 403 Score = 85.1 bits (209), Expect = 3e-15 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+H + G+EAAR +I+ E ++ G+ VD RH+ L+AD MT +G ++ R Sbjct: 281 TTNDIHEIETVLGIEAARQSIINEARNTLENQGLSVDVRHIMLVADIMTSEGEVKSIGRH 340 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCV 181 GI S L + +FE L A++RG VDDL + +G+ + LGTG + Sbjct: 341 GISGEKSSVLARAAFEETGKHLLRASIRGEVDDLTGIIENIIIGQPIPLGTGSI 394 [185][TOP] >UniRef100_B9AEP5 Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AEP5_METSM Length = 403 Score = 85.1 bits (209), Expect = 3e-15 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+H + G+EAAR +I+ E ++ G+ VD RH+ L+AD MT +G ++ R Sbjct: 281 TTNDIHEIETVLGIEAARQSIINEARNTLENQGLSVDVRHIMLVADIMTSEGEVKSIGRH 340 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCV 181 GI S L + +FE L A++RG VDDL + +G+ + LGTG + Sbjct: 341 GISGEKSSVLARAAFEETGKHLLRASIRGEVDDLTGIIENIIIGQPIPLGTGSI 394 [186][TOP] >UniRef100_UPI0001A48A43 DNA-DIRECTED RNA POLYMERASE RPO1C SUBUNIT n=1 Tax=Sulfolobus shibatae RepID=UPI0001A48A43 Length = 395 Score = 84.0 bits (206), Expect = 6e-15 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G Sbjct: 274 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 333 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + L + +FE L DA RG V++ K + +G ++LGTG VEL + Sbjct: 334 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 391 [187][TOP] >UniRef100_UPI0000164E43 DNA-directed RNA polymerase subunit A'''''''' n=1 Tax=Thermoplasma volcanium GSS1 RepID=UPI0000164E43 Length = 513 Score = 84.0 bits (206), Expect = 6e-15 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ + G+EAAR I+ E Q G+ VD RHL L+AD MT G RA R G Sbjct: 389 TNDIVEIATVLGIEAARNAILNEAQRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 448 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I S L + +FE L A + G VD L A + VG+ + LGTG V+++ Sbjct: 449 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 504 [188][TOP] >UniRef100_Q5FC19 Protein Y48E1A.1b, confirmed by transcript evidence n=1 Tax=Caenorhabditis elegans RepID=Q5FC19_CAEEL Length = 120 Score = 84.0 bits (206), Expect = 6e-15 Identities = 44/93 (47%), Positives = 59/93 (63%) Frame = -2 Query: 450 EVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTD 271 E+ +VF+ YGI V RHLSL AD+MT G + NR + SS SP KM+FET FL + Sbjct: 2 EMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGAMSSSSSPLQKMTFETTMAFLRE 61 Query: 270 ATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 A L G D++ SP+ARL +G + GTG +L+ Sbjct: 62 ALLHGEEDNVNSPSARLVMGALPRGGTGSFDLL 94 [189][TOP] >UniRef100_B8YB54 RNA polymerase subunit 1C n=1 Tax=Sulfolobus shibatae B12 RepID=B8YB54_SULSH Length = 395 Score = 84.0 bits (206), Expect = 6e-15 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G Sbjct: 274 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 333 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + L + +FE L DA RG V++ K + +G ++LGTG VEL + Sbjct: 334 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 391 [190][TOP] >UniRef100_Q979F5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermoplasma volcanium RepID=RPOA2_THEVO Length = 508 Score = 84.0 bits (206), Expect = 6e-15 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ + G+EAAR I+ E Q G+ VD RHL L+AD MT G RA R G Sbjct: 384 TNDIVEIATVLGIEAARNAILNEAQRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 443 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I S L + +FE L A + G VD L A + VG+ + LGTG V+++ Sbjct: 444 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 499 [191][TOP] >UniRef100_C3MZM9 DNA-directed RNA polymerase subunit A'' n=6 Tax=Sulfolobus islandicus RepID=RPOA2_SULIA Length = 392 Score = 84.0 bits (206), Expect = 6e-15 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G Sbjct: 271 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 330 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + L + +FE L DA RG V++ K + +G ++LGTG VEL + Sbjct: 331 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 388 [192][TOP] >UniRef100_P58192 DNA-directed RNA polymerase subunit A'' n=2 Tax=Sulfolobus solfataricus RepID=RPOA2_SULSO Length = 392 Score = 83.6 bits (205), Expect = 8e-15 Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + +G+EAAR I+RE+ V + G+ VD RH+ LIAD MT G R R G Sbjct: 271 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDIRHILLIADVMTRTGIVRQIGRHG 330 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + L + +FE L DA RG V++ K + +G ++LGTG VEL + Sbjct: 331 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 388 [193][TOP] >UniRef100_A4YCR0 DNA-directed RNA polymerase subunit A'' n=1 Tax=Metallosphaera sedula DSM 5348 RepID=RPOA2_METS5 Length = 392 Score = 83.6 bits (205), Expect = 8e-15 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++H + GVEAAR I RE++ V G+ VD RH+ L++D MT G R R G Sbjct: 271 TNNLHEVESVLGVEAARELITREIKRVLEEQGLDVDIRHIELVSDIMTRTGEVRQIGRHG 330 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + S + +FE L DA RG +++ K + +G+ ++LGTG VEL+ + Sbjct: 331 VTGEKTSVLARAAFEVTVKHLLDAAARGDMEEFKGVVENIIIGQPIKLGTGMVELLMR 388 [194][TOP] >UniRef100_A2BN35 DNA-directed RNA polymerase subunit A'' n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN35_HYPBU Length = 424 Score = 83.2 bits (204), Expect = 1e-14 Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN +H + G+EAAR ++RE++ V G+ VD RHL L+AD MT G R R G Sbjct: 288 TNSIHEIEEVLGIEAARTMLIREMKDVLDEQGLDVDIRHLMLVADIMTMTGRVRQIGRHG 347 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 + SPF + +FE L A + G VD L A + VG V+ +GTG VE+ Sbjct: 348 VSGEKPSPFARAAFEMTTQNLYAAAVEGEVDRLLGVAETVIVGGVIRVGTGMVEV 402 [195][TOP] >UniRef100_Q8TXI9 DNA-directed RNA polymerase largest subunit, the N-terminal part n=1 Tax=Methanopyrus kandleri RepID=Q8TXI9_METKA Length = 429 Score = 82.8 bits (203), Expect = 1e-14 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 4/118 (3%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND + V GVEA R I+ +++ V+ + GI VDPRH LI+D M+ G R+ +G Sbjct: 296 TNDPKIVDVLLGVEAGRNAIIEQLEEVYESQGISVDPRHFMLISDMMSFWGELRSVRSVG 355 Query: 336 ----IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 +E SP K +FE + LT+ G V++L+ + VG+ V +GTG VEL Sbjct: 356 GYSVMELKGSPLTKAAFEYVSRVLTETATSGDVEELRGVLENIIVGKPVPVGTGTVEL 413 [196][TOP] >UniRef100_P11514 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus acidocaldarius RepID=RPOA2_SULAC Length = 393 Score = 82.8 bits (203), Expect = 1e-14 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++H + G+EAAR I RE++ V G+ VD RH+ L++D MT G R R G Sbjct: 272 TNNIHEVEEVLGIEAARELISREIKKVLEEQGLDVDMRHIVLVSDIMTRTGDIRQIGRHG 331 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + S L + +FE L DA RG ++ K + +G+ + LGTG VEL + Sbjct: 332 VTGEKSSVLARAAFEVTVKHLLDAAARGEREEFKGVIENIIIGQPIRLGTGIVELTMK 389 [197][TOP] >UniRef100_A8MAA3 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAA3_CALMQ Length = 388 Score = 82.4 bits (202), Expect = 2e-14 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 ++D+H + G+EAAR IMRE+++V G+ VD RHL ++AD MT G R R G Sbjct: 269 SHDIHEVAEVLGIEAARTMIMRELKAVLDDQGLDVDTRHLMMVADVMTWDGKVRQIGRHG 328 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + VSP + +FE L +A G + K + GR V +GTG VEL+ Sbjct: 329 VAGQKVSPLARAAFEVTVKNLIEAAYMGESEKFKGVVENIISGRYVPIGTGYVELM 384 [198][TOP] >UniRef100_O27126 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPOA2_METTH Length = 451 Score = 82.4 bits (202), Expect = 2e-14 Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+H + G+EAAR I+ E + G+ VD RH+ L+AD MT G ++ R Sbjct: 330 TTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRH 389 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 GI S + SFE L A++RG VD L + +G+ + LGTG V +V + Sbjct: 390 GISGEKASVLARASFEETGKHLLRASIRGEVDHLTGIIENIIIGQPIPLGTGSVSVVMK 448 [199][TOP] >UniRef100_Q6L2G0 DNA-directed RNA polymerase subunit A'''' n=1 Tax=Picrophilus torridus RepID=Q6L2G0_PICTO Length = 508 Score = 82.0 bits (201), Expect = 2e-14 Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ + G+EAAR I E + S G+ VD RHL L+AD MT G RA R G Sbjct: 383 TNDIIEIEQVLGIEAARNAIYLEAERTLSEQGLNVDKRHLMLVADMMTFSGNVRAVGRQG 442 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I S L + +FE + L A L G VD L A + VG+ + LGTG + LV Sbjct: 443 ISGRKSSVLARAAFEITSKHLLKAGLLGEVDQLAGVAENIIVGQPITLGTGAINLV 498 [200][TOP] >UniRef100_Q12WS7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WS7_METBU Length = 386 Score = 82.0 bits (201), Expect = 2e-14 Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN++ + +G+EAAR I++E G+ VD RHL L++D MT G + R Sbjct: 262 STNNIGEIYEVFGIEAARFAIIKEASDTLREQGLTVDIRHLMLVSDIMTCDGEVKQIGRH 321 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI S F + +FE + L DA +RG +D+L + VG+ ++LGTG V LV Sbjct: 322 GISGEKASVFARAAFEVTVNHLLDAGMRGDIDELNGVTENIIVGQPIKLGTGDVHLV 378 [201][TOP] >UniRef100_P09847 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter thermautotrophicus str. Winter RepID=RPOA2_METTW Length = 449 Score = 82.0 bits (201), Expect = 2e-14 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+H + G+EAAR I+ E + G+ VD RH+ L+AD MT G ++ R Sbjct: 330 TTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRH 389 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 GI S + SFE L A++RG VD L + +G+ + LGTG V ++ + Sbjct: 390 GISGEKASVLARASFEETGKHLLRASIRGEVDHLTGIIENIIIGQPIPLGTGSVSVIMK 448 [202][TOP] >UniRef100_Q74MX8 NEQ427 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX8_NANEQ Length = 374 Score = 81.6 bits (200), Expect = 3e-14 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTND+H + G++AAR I+ E+Q V G+ +D R+L LIAD MT+ G R Sbjct: 243 TTNDIHEIAKVLGIDAAREAIIEEIQKVLEEQGLEIDVRYLLLIADVMTYYGEVLGFTRH 302 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 G+ E SP + +FE L DA L G DDL++ + + + +GTG ++LV Sbjct: 303 GLMERKPSPLERATFEVPFKNLADAALLGEKDDLRAVIVNVLINQPAPMGTGRIKLV 359 [203][TOP] >UniRef100_A0B559 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosaeta thermophila PT RepID=A0B559_METTP Length = 384 Score = 81.3 bits (199), Expect = 4e-14 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN+++ + G+EAAR I+ E G+ VD RH+ L+AD MT G + R G Sbjct: 260 TNNINEICEVLGIEAARNAIINEATETLREQGLQVDVRHIMLVADIMTCDGDVKQIGRHG 319 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 + S + +FE + + DA +RG VDDL+ + VG+ + LGTG V+LV Sbjct: 320 VSGEKASVLARAAFEVTVNHILDAAIRGDVDDLRGVTENVIVGQPIRLGTGDVQLV 375 [204][TOP] >UniRef100_C8SAT4 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAT4_FERPL Length = 376 Score = 81.3 bits (199), Expect = 4e-14 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN+++ + G+EAAR ++ E + G+ VD RH+ L+AD MT G + R G Sbjct: 254 TNNIYEIYEVLGIEAARNAVINEALATLEEQGLEVDVRHIMLVADAMTADGELKQIGRHG 313 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160 + L + +FE + L +A++RG VD L + VG+ ++LGTG VELV ++G Sbjct: 314 VAGEKQSILARAAFEMTVNNLLEASVRGEVDRLNGITENIIVGQPIKLGTGDVELVLKLG 373 Query: 159 G 157 G Sbjct: 374 G 374 [205][TOP] >UniRef100_B1YC26 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=B1YC26_THENV Length = 379 Score = 80.9 bits (198), Expect = 5e-14 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+H + G+EAARA + +E++ V G+ VD RH+ L+AD MT G + R G Sbjct: 261 SNDLHEVEEVLGIEAARALVAQEIKRVLEEQGLDVDIRHMYLVADTMTWSGRLKPIGRHG 320 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + SP + +FE L +A++RG + K + GR V +GTG V L+ Q Sbjct: 321 VVGAKESPLARAAFEVTVKTLVEASVRGEEEQFKGVVENIVAGRYVPVGTGIVRLLMQ 378 [206][TOP] >UniRef100_P15353 DNA-directed RNA polymerase subunit A'' n=1 Tax=Halococcus morrhuae RepID=RPOA2_HALMO Length = 393 Score = 80.9 bits (198), Expect = 5e-14 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 2/123 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343 T N++H + GVEAAR TI+ E + G+G V+ RHL L+AD MT +G + R Sbjct: 263 TCNNIHEVYRNLGVEAARETIIDETMNTLEEQGLGDVNIRHLMLVADIMTAEGTIESIGR 322 Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 GI + + L + +FE + L DA + G VDDL + VG+ ++LGTG V L + Sbjct: 323 HGISGNKNSVLARAAFEVTVNHLLDAAVHGEVDDLDGVTENVIVGKPIKLGTGDVNL--R 380 Query: 165 IGG 157 +GG Sbjct: 381 MGG 383 [207][TOP] >UniRef100_A1RWW4 DNA-directed RNA polymerase, subunit A' n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWW4_THEPD Length = 403 Score = 80.5 bits (197), Expect = 6e-14 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 2/117 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN++ + G+EAARA I++E++ V +G+ VD RH+ ++AD MT+ G R R Sbjct: 272 TTNNILEIYEVLGIEAARAAIIKEIKKVLDEHGLDVDWRHIMMVADAMTYSGKVRQVGRH 331 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVG-RVVELGTGCVEL 175 G+ L + SFE L +A LRG +D+L+ + +G + + LGTG V+L Sbjct: 332 GVAGEKGSVLARASFEVTVKNLVEAALRGELDELRGVIENVIIGSKPIPLGTGSVKL 388 [208][TOP] >UniRef100_P14247 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcus vannielii SB RepID=RPOA2_METVS Length = 386 Score = 80.5 bits (197), Expect = 6e-14 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN++ + GVEAAR I+RE+ + G+ VD RHL ++AD MT G + R Sbjct: 259 TTNNIVEIQDVLGVEAARNAIIREMDATLGNQGLTVDKRHLMMVADLMTTDGVVKPIGRH 318 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI S + +FE L A++RG VDDL + VG+ + +GTGC+ + Sbjct: 319 GIGGEKASVLARAAFEETVKHLYSASMRGYVDDLSGVVENIIVGKPISMGTGCINV 374 [209][TOP] >UniRef100_Q8PUR2 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina mazei RepID=RPOA2_METMA Length = 408 Score = 80.5 bits (197), Expect = 6e-14 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+++ + G+EAAR I++E G+ VD RH+ L+AD MT G + R Sbjct: 267 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVADLMTSDGEVKQIGRH 326 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+ + Sbjct: 327 GISGEKASVFARAAFEVTVNHLLDAGMRGYVDQLQGVTENIIVGQPIRMGTGDVHLISR 385 [210][TOP] >UniRef100_Q8TRB8 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina acetivorans RepID=RPOA2_METAC Length = 397 Score = 80.5 bits (197), Expect = 6e-14 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+++ + G+EAAR I++E G+ VD RH+ L+AD MT G + R Sbjct: 264 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVADLMTCDGEVKQIGRH 323 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+ + Sbjct: 324 GISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQGVTENIIVGQPIRMGTGDVHLISR 382 [211][TOP] >UniRef100_A5ATH2 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5ATH2_VITVI Length = 814 Score = 80.1 bits (196), Expect = 8e-14 Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340 +N+VHAML TYGVEA RAT ++EV ++ +AYG+ + H S I DFM H GY+ NR Sbjct: 641 SNNVHAMLNTYGVEATRATXIKEVFNISNAYGVKDNIHHXSEIVDFMIHSDGYQPMNRHG 700 Query: 339 GIESSVSPFLKMSFETAAHFL 277 GI SVS F KM+FE A+ F+ Sbjct: 701 GITESVSLFNKMTFEIASKFI 721 [212][TOP] >UniRef100_Q03586 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermoplasma acidophilum RepID=RPOA2_THEAC Length = 508 Score = 80.1 bits (196), Expect = 8e-14 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TND+ + G+EAAR I+ E G+ VD RHL L+AD MT G RA R G Sbjct: 384 TNDIVEIANVLGIEAARNAILNEALRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 443 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I S L + +FE L A + G VD L A + VG+ + LGTG V+++ Sbjct: 444 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 499 [213][TOP] >UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata RepID=Q9AXN0_9RHOD Length = 1746 Score = 79.7 bits (195), Expect = 1e-13 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV M VT G+E RA ++ E++ V S G V+ RHL+++AD MT +G + R G Sbjct: 1355 SNDVVEMFVTLGIEGVRAALLNEIRGVISFDGAYVNYRHLAILADIMTCRGHIMSITRHG 1414 Query: 336 IES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187 I ++ SFE A L +A + G VDD+K A + +G++ +GTG Sbjct: 1415 INRVETGALMRCSFEETADILLEAAMYGEVDDMKGVAENIMLGQMAPVGTG 1465 [214][TOP] >UniRef100_Q0W8G8 DNA-directed RNA polymerase, subunit A2 n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8G8_UNCMA Length = 384 Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN+++ + G+EAAR I++E S G+ VD RH+ L+AD MT G + R G Sbjct: 261 TNNINEIAEVLGIEAARNAIIKETLDTLSEQGLTVDIRHIMLVADMMTIDGEVKQIGRHG 320 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I + L + +FE + L DA + G VD+L + VG+ ++LGTG VEL+ Sbjct: 321 ISGEKASVLSRAAFEVTVNHLLDAAVAGEVDELTGVTENVIVGQPIQLGTGDVELL 376 [215][TOP] >UniRef100_C7DHC3 RNA polymerase Rpb1 domain 5 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHC3_9EURY Length = 347 Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N++ + YGVEAAR I E++S G V RH+SL+AD MT+ G R+ R G Sbjct: 219 SNNLFDVFKVYGVEAARNMIANELKSTIENEGFTVSFRHVSLLADTMTYNGAIRSAGRHG 278 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I S F + ++E +A++ G VD+LK A + +G+ +++GTG V+LV Sbjct: 279 IAGEKASVFARAAYEETVKHFVNASIFGEVDELKGVAENILIGKQIKVGTGRVKLV 334 [216][TOP] >UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9VCM2_MONBE Length = 1414 Score = 79.0 bits (193), Expect = 2e-13 Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Frame = -2 Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334 N V + T G+EAAR+ IM +VQ V S YGI ++PRH L++D MT +G R GI Sbjct: 1270 NHVMELEQTLGIEAARSIIMDQVQYVMSNYGIHINPRHTMLMSDLMTFKGEVLGITRFGI 1329 Query: 333 -ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + S F+ SFE L DA LRG+ D + + + +G + +GTG +L+ + Sbjct: 1330 AKMKESVFMLASFEKTTDHLFDAALRGTTDSVDGVSECIILGVPMRIGTGLFKLLHE 1386 [217][TOP] >UniRef100_Q464Y8 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q464Y8_METBF Length = 426 Score = 79.0 bits (193), Expect = 2e-13 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+++ + G+EAAR I++E G+ VD RH+ L++D MT G + R Sbjct: 266 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVSDLMTCDGEVKQIGRH 325 Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+ Sbjct: 326 GISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQGVTENIIVGQPIRMGTGDVHLI 382 [218][TOP] >UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus RepID=Q9BMP2_STYMT Length = 1678 Score = 78.6 bits (192), Expect = 2e-13 Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+ +L G+EA R +++ E++ V S+YGI V+ RHLS + D MT +G A R G Sbjct: 1243 SNDIIEILRVLGIEAVRMSLINELRFVLSSYGIYVNYRHLSTLCDVMTQRGILTAITRHG 1302 Query: 336 IES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 I SP K SFE L +A + D LK + +G++ GTGC E+ Sbjct: 1303 INRVDSSPLRKCSFEETVEILLEAAVFAETDPLKGITENIIMGQLAPFGTGCFEI 1357 [219][TOP] >UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M626_ENTHI Length = 1379 Score = 78.6 bits (192), Expect = 2e-13 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N + + G+EAAR+TI+ E+++V AYG+ +D RHL L++D MT +G R Sbjct: 1246 TSNHIAVVEKVLGIEAARSTIISEIKNVMDAYGLSIDVRHLLLLSDLMTFKGVILGITRY 1305 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI + S F SFE L DA + D++K + + VG V LGTG ++++ Sbjct: 1306 GISKMKDSVFTFASFERTNDHLFDAAVHSRKDEIKGVSESIIVGNQVGLGTGLMQIL 1362 [220][TOP] >UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EG66_ENTDI Length = 1379 Score = 78.6 bits (192), Expect = 2e-13 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N + + G+EAAR+TI+ E+++V AYG+ +D RHL L++D MT +G R Sbjct: 1246 TSNHIAVVEKVLGIEAARSTIISEIKNVMDAYGLSIDVRHLLLLSDLMTFKGVILGITRY 1305 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 GI + S F SFE L DA + D++K + + VG V LGTG ++++ Sbjct: 1306 GISKMKDSVFTFASFERTNDHLFDAAVHSRKDEIKGVSESIIVGNQVGLGTGLMQIL 1362 [221][TOP] >UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V991_NOSCE Length = 1335 Score = 78.6 bits (192), Expect = 2e-13 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N + + G+EAARA I+ E++ V +GI +DPRH+ L+AD MT++G R Sbjct: 1213 TSNAILEIQEVLGIEAARAHIISEIEYVVGKHGIKIDPRHVMLLADTMTYKGEVLGITRF 1272 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI + S S + SFE + L +A +R D++K + + +G+ + +GTG V+L Sbjct: 1273 GISKMSCSTLMLASFEQTSEHLFEAAIRSRSDEVKGVSESIILGKNIGIGTGEVQL 1328 [222][TOP] >UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XZZ0_ASPFC Length = 1453 Score = 78.6 bits (192), Expect = 2e-13 Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+V M G+EAAR TI++E+ V +G+DPRH+ L+AD MT++G R Sbjct: 1296 STNNVMEMRDVLGIEAARVTIVQEISEVMK--DMGIDPRHMQLLADVMTYKGEVLGITRF 1353 Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++ Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIMGKTVSLGTGAMEVVRKL 1413 [223][TOP] >UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D5Y9_NEOFI Length = 1453 Score = 78.6 bits (192), Expect = 2e-13 Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+V M G+EAAR TI++E+ V +G+DPRH+ L+AD MT++G R Sbjct: 1296 STNNVMEMRDVLGIEAARVTIVQEISEVMK--DMGIDPRHMQLLADVMTYKGEVLGITRF 1353 Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++ Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIMGKTVSLGTGAMEVVRKL 1413 [224][TOP] >UniRef100_A4WNA0 DNA-directed RNA polymerase, subunit A' n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=A4WNA0_PYRAR Length = 379 Score = 78.6 bits (192), Expect = 2e-13 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+H + G+EAARA + +E++ V G+ VD RH+ ++AD MT G R R G Sbjct: 261 SNDLHEVEEVLGIEAARALVAQEIKRVLDEQGLDVDIRHMYMVADTMTWSGRLRPIGRHG 320 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + + SP + +FE L +A++RG + K + G+ + +GTG V L+ Q Sbjct: 321 VVGTKESPLARAAFEVTVKTLIEASVRGEEEAFKGVVESIIAGKYIPIGTGIVRLLMQ 378 [225][TOP] >UniRef100_A3DMP5 DNA-directed RNA polymerase, subunit A' n=1 Tax=Staphylothermus marinus F1 RepID=A3DMP5_STAMF Length = 421 Score = 78.6 bits (192), Expect = 2e-13 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + G+EAARA I+RE ++V G+ VD RHL L+AD MT G R R+G Sbjct: 275 TNNIAEIEEILGIEAARAAIIRETKNVLEDQGLDVDIRHLILLADMMTWTGKIRQVGRMG 334 Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 I S + +FE L +A + G VD LK + +G+ V +GTG VE+ Sbjct: 335 IAGEKPSVLARATFEMTVQKLVEAAVEGEVDMLKGVPENVIIGQPVPVGTGIVEI 389 [226][TOP] >UniRef100_B3A010 RNA polymerase subunit C n=1 Tax=Haloarcula japonica RepID=B3A010_HALJP Length = 395 Score = 78.6 bits (192), Expect = 2e-13 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343 T N++H + GVEAAR T++ E + G+ V+ RHL L+AD MT++G + R Sbjct: 272 TCNNIHEIYRELGVEAARETLINETMNTLEEQGLDDVNVRHLMLVADIMTNEGTIESIGR 331 Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI S L + +FE + L DA + G VD+L + VG+ ++LGTG V L Sbjct: 332 HGISGSKDSVLARAAFEVTVNHLLDAAIHGEVDELDGVTENVIVGKPIKLGTGDVNL 388 [227][TOP] >UniRef100_Q5UZR5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Haloarcula marismortui RepID=RPOA2_HALMA Length = 395 Score = 78.6 bits (192), Expect = 2e-13 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343 T N++H + GVEAAR T++ E + G+ V+ RHL L+AD MT++G + R Sbjct: 272 TCNNIHEIYRELGVEAARETLINETMNTLEEQGLDDVNVRHLMLVADIMTNEGTIESIGR 331 Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI S L + +FE + L DA + G VD+L + VG+ ++LGTG V L Sbjct: 332 HGISGSKDSVLARAAFEVTVNHLLDAAIHGEVDELDGVTENVIVGKPIKLGTGDVNL 388 [228][TOP] >UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=Q9BMP3_MONBE Length = 1743 Score = 78.2 bits (191), Expect = 3e-13 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ + T+G+E AR I E+ +V S G V+ RHLSL+ D MT +G A R Sbjct: 1278 TSNDIVEIFSTFGIEGARKAIEAEMYNVISFGGSYVNARHLSLLCDIMTTKGYLMAITRH 1337 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 G+ + +K SFE L +A G D LK + + +G+V+ GTGC +L+ Sbjct: 1338 GVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLL 1394 [229][TOP] >UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V5W6_MONBE Length = 1307 Score = 78.2 bits (191), Expect = 3e-13 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ + T+G+E AR I E+ +V S G V+ RHLSL+ D MT +G A R Sbjct: 842 TSNDIVEIFSTFGIEGARKAIEAEMYNVISFGGSYVNARHLSLLCDIMTTKGYLMAITRH 901 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 G+ + +K SFE L +A G D LK + + +G+V+ GTGC +L+ Sbjct: 902 GVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLL 958 [230][TOP] >UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V3B7_PHANO Length = 1473 Score = 78.2 bits (191), Expect = 3e-13 Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +N V + G+EAARATIMRE+ +V + +DPRH++L+AD MT +G R G Sbjct: 1336 SNHVMEVRTVLGIEAARATIMREISAVMG--NMDIDPRHMALLADVMTFKGDVYGITRFG 1393 Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 ++ + L++ SFE L +A RG D + + + +G+ ++LGTG +++V+ + Sbjct: 1394 LQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSESIIMGQSMKLGTGALQVVRPL 1452 [231][TOP] >UniRef100_Q8ZYQ7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrobaculum aerophilum RepID=RPOA2_PYRAE Length = 379 Score = 78.2 bits (191), Expect = 3e-13 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +ND+H + G+EA RA + +E++ V G+ VD RH+ L+AD MT G R R G Sbjct: 261 SNDLHEVEEVLGIEATRALVAQEIKRVLEEQGLDVDIRHMYLVADAMTWSGRLRPIGRHG 320 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 + S SP + +FE L +A++RG + K + G+ V +GTG V L+ Q Sbjct: 321 VVGSKESPLARAAFEVTVKTLIEASVRGEDELFKGVVESIIAGKYVPIGTGIVRLLMQ 378 [232][TOP] >UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UCP5_THEAN Length = 1678 Score = 77.4 bits (189), Expect = 5e-13 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV + +G+EAAR ++RE+++V S G V+ RHLSL+ D MT +G + R G Sbjct: 1343 SNDVSEIFHVFGIEAARRALLREIRAVISFDGAYVNYRHLSLLCDIMTQKGYLMSITRHG 1402 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I + P +K SFE L A + G VD LK + VG++ GTG +++ Sbjct: 1403 INRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIM 1458 [233][TOP] >UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N0F9_THEPA Length = 1681 Score = 77.4 bits (189), Expect = 5e-13 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 +NDV + +G+EAAR ++RE+++V S G V+ RHLSL+ D MT +G + R G Sbjct: 1343 SNDVSEIFHVFGIEAARRALLREIRAVISFDGAYVNYRHLSLLCDIMTQKGYLMSITRHG 1402 Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 I + P +K SFE L A + G VD LK + VG++ GTG +++ Sbjct: 1403 INRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIM 1458 [234][TOP] >UniRef100_C9RDK7 RNA polymerase Rpb1 domain 5 n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RDK7_9EURY Length = 799 Score = 77.4 bits (189), Expect = 5e-13 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R Sbjct: 669 TTNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDVRHLMLVADIMTADGEVKPIGRH 728 Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 G+ L + +FE L + RG VD LK + VG+ + LGTGCV+L+ Sbjct: 729 GVAGEKGSVLARAAFEETVKHLYASAERGDVDKLKGVIENVIVGKPIYLGTGCVDLM 785 [235][TOP] >UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium discoideum RepID=RPB1_DICDI Length = 1727 Score = 77.4 bits (189), Expect = 5e-13 Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 1/116 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ ++ G+EA R +++E+++V S G V+ RHL+++AD MT++G A R Sbjct: 1346 TSNDIVEIIQVLGIEAVRNALLKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRH 1405 Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI P ++ SFE L DA + DD+K + +G++ LGTG E+ Sbjct: 1406 GINRVETGPLMRCSFEETVEILMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEV 1461 [236][TOP] >UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927B1 Length = 1355 Score = 77.0 bits (188), Expect = 7e-13 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N+ + G+EA+RATI+ E+ SV +GI +DPRH LIAD MT +G R Sbjct: 1201 TSNNTFQVWNALGIEASRATIISEIDSVMGNHGISIDPRHPMLIADLMTSRGELLGITRF 1260 Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172 G+ L + SFE + L DA G D + + + +G + LGTG +L+ Sbjct: 1261 GLSKMKESVLNLASFEKTSDHLFDAAYYGQTDTINGVSESIIMGIPINLGTGFFKLI 1317 [237][TOP] >UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C4M1_THAPS Length = 1422 Score = 77.0 bits (188), Expect = 7e-13 Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN + + T GVEAAR +I E+ + +AYGIG+D RHL L++D MT +G R Sbjct: 1281 TTNHIIEVEQTLGVEAARTSISSEISYIMNAYGIGIDSRHLLLLSDVMTFKGEVLGITRF 1340 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166 G+ + S + SFE L DA + G D + + + +G + +GTG +L+++ Sbjct: 1341 GVAKMRESVLMLASFEKTTDHLLDAAVHGRTDAIDGVSECIIMGIPIPIGTGLFKLLKR 1399 [238][TOP] >UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2U3T5_ASPOR Length = 1447 Score = 77.0 bits (188), Expect = 7e-13 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+V M G+EAAR TI+RE+ V + +DPRH+ L+AD MT++G R Sbjct: 1296 STNNVMEMREVLGIEAARTTIVREISEVMK--DMDIDPRHMQLLADVMTYKGEVLGITRF 1353 Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++ Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLVEGVSECIIMGKTVSLGTGAMEVVRRM 1413 [239][TOP] >UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FEK3_NANOT Length = 1443 Score = 77.0 bits (188), Expect = 7e-13 Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN + M G+EAAR TI+ E+ SV S G+ +DPRH+ L+AD MT++G R G Sbjct: 1289 TNHIMEMRDVLGIEAARTTIIDEISSVMS--GMSIDPRHMQLLADVMTYKGEVLGITRFG 1346 Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + L++ SFE A L DA G D ++ + + +G+ + LGTG +E+V+ + Sbjct: 1347 LAKIRDSVLQLASFEKTADHLFDAGGAGRRDAVQGVSECIIMGKTISLGTGSMEVVRDL 1405 [240][TOP] >UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NTG3_ASPFN Length = 1436 Score = 77.0 bits (188), Expect = 7e-13 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 +TN+V M G+EAAR TI+RE+ V + +DPRH+ L+AD MT++G R Sbjct: 1285 STNNVMEMREVLGIEAARTTIVREISEVMK--DMDIDPRHMQLLADVMTYKGEVLGITRF 1342 Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++ Sbjct: 1343 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLVEGVSECIIMGKTVSLGTGAMEVVRRM 1402 [241][TOP] >UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6K6_MALGO Length = 1376 Score = 77.0 bits (188), Expect = 7e-13 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN V M G+EAAR++I RE+ +++G+ +DPRH+ L+AD MT++G R G Sbjct: 1244 TNHVMEMQQVLGIEAARSSIYREIDYTMASHGMSIDPRHVMLLADVMTYKGEVLGITRFG 1303 Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE-LGTGCVELVQQI 163 + L + SFE L DA L G D + + + +G + +GTG LV Q Sbjct: 1304 VAKMKDSVLMLASFEKTTDHLFDAALFGKSDSISGVSESIIMGNPAQTVGTGMPALVSQK 1363 Query: 162 GGLAP 148 LAP Sbjct: 1364 PTLAP 1368 [242][TOP] >UniRef100_C7P942 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P942_METFA Length = 387 Score = 77.0 bits (188), Expect = 7e-13 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R G Sbjct: 260 TNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDIRHLMLVADMMTADGEVKPIGRHG 319 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 + L + +FE L A RG VD LK + VG+ + LGTGCVEL Sbjct: 320 VAGEKGSVLARAAFEETVKHLYAAAERGDVDKLKGVIENVIVGKPIYLGTGCVEL 374 [243][TOP] >UniRef100_Q58446 Mja rpoA2 intein n=1 Tax=Methanocaldococcus jannaschii RepID=RPOA2_METJA Length = 859 Score = 77.0 bits (188), Expect = 7e-13 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R G Sbjct: 731 TNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDIRHLMLVADIMTADGEVKPIGRHG 790 Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 + L + +FE L A RG VD LK + VG+ + LGTGCVEL Sbjct: 791 VAGEKGSVLARAAFEETVKHLYAAAERGDVDKLKGVIENVIVGKPIYLGTGCVEL 845 [244][TOP] >UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B23 Length = 1653 Score = 76.6 bits (187), Expect = 9e-13 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ + G+EA R + RE+ V S G V+ RHL+L+ D MT +G A R Sbjct: 1328 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1387 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV--- 172 G+ P +K SFE L +A G D +K + + +G++ GTGC +L+ Sbjct: 1388 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1447 Query: 171 QQIGGLAPGH 142 ++ G ++P + Sbjct: 1448 EKCGAMSPSY 1457 [245][TOP] >UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B22 Length = 1722 Score = 76.6 bits (187), Expect = 9e-13 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+ND+ + G+EA R + RE+ V S G V+ RHL+L+ D MT +G A R Sbjct: 1328 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1387 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV--- 172 G+ P +K SFE L +A G D +K + + +G++ GTGC +L+ Sbjct: 1388 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1447 Query: 171 QQIGGLAPGH 142 ++ G ++P + Sbjct: 1448 EKCGAMSPSY 1457 [246][TOP] >UniRef100_Q3IUN1 DNA-directed RNA polymerase subunit A'' (Subunit C) n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IUN1_NATPD Length = 894 Score = 76.6 bits (187), Expect = 9e-13 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 2/117 (1%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343 T N++H + G+EAAR I+ E + G+ V+ RHL L+AD MT+ G + R Sbjct: 764 TCNNIHEIHNNLGIEAAREAIIEETMNTLEEQGLDDVNIRHLMLVADIMTNNGEIESIGR 823 Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI + L + +FE + L DA + G VDDL + VG+ ++LGTG V+L Sbjct: 824 HGISGNKDSVLARAAFEVTVNHLLDAAIHGEVDDLDGVTENVIVGKPIKLGTGDVDL 880 [247][TOP] >UniRef100_A8TEB9 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanococcus voltae A3 RepID=A8TEB9_METVO Length = 387 Score = 76.6 bits (187), Expect = 9e-13 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 TTN++ + GVEAAR I+ E+ + S G+ VDPRHL +++D MT G + R Sbjct: 261 TTNNIIEIQDVLGVEAARNAIIYEMAATLSNQGLTVDPRHLMMVSDLMTTDGVVKPIGRH 320 Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175 GI S + +FE L A++RG D+L + VG+ + +GTGC+ + Sbjct: 321 GIGGEKASVLARAAFEETVKHLYSASMRGYSDELDGVVENIIVGKPISIGTGCINV 376 [248][TOP] >UniRef100_Q9V113 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus abyssi RepID=RPOA2_PYRAB Length = 397 Score = 76.6 bits (187), Expect = 9e-13 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -2 Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337 TN++H + G+EAAR I+ E+ + G+ VD RH+ L+AD MT G R R G Sbjct: 268 TNNIHEIAEVLGIEAARNAIIEEIMNTMREQGLEVDIRHIMLVADIMTLDGVVRPIGRHG 327 Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 + S + +FE L +A RG VD+L + +G+ V +GTG V+L ++ Sbjct: 328 VVGEKASVLARAAFEITVQHLFEAAERGEVDNLSGVIENVLIGQPVPVGTGMVKLTMKL 386 [249][TOP] >UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding / zinc ion binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001505876 Length = 1376 Score = 76.3 bits (186), Expect = 1e-12 Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N+V + T G+EAAR TI+ E+ +V +G+ +D RH+ L+AD MT++G R Sbjct: 1242 TSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRT 1301 Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+ S ++ SFE L A G VD+++ + +G ++LGTG ++++Q+ Sbjct: 1302 GIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRT 1361 Query: 162 GGL 154 L Sbjct: 1362 DDL 1364 [250][TOP] >UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9LVH0_ARATH Length = 1383 Score = 76.3 bits (186), Expect = 1e-12 Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Frame = -2 Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340 T+N+V + T G+EAAR TI+ E+ +V +G+ +D RH+ L+AD MT++G R Sbjct: 1249 TSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRT 1308 Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163 GI+ S ++ SFE L A G VD+++ + +G ++LGTG ++++Q+ Sbjct: 1309 GIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRT 1368 Query: 162 GGL 154 L Sbjct: 1369 DDL 1371