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[1][TOP]
>UniRef100_C1EFA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Micromonas sp. RCC299
RepID=C1EFA8_9CHLO
Length = 1616
Score = 156 bits (394), Expect = 9e-37
Identities = 75/111 (67%), Positives = 94/111 (84%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTNDV+AML TYGVEAAR T+++EV++VF YGIGVD RHL+LIADFM QG YR C+R
Sbjct: 1502 TTNDVYAMLQTYGVEAARQTLVQEVRNVFGVYGIGVDARHLTLIADFMMQQGNYRPCSRA 1561
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
GIE+S SPFLKMS+ETAA FL DAT++G+ D L+SP++R+ +GRV +LGTG
Sbjct: 1562 GIETSPSPFLKMSYETAAAFLVDATMKGAEDTLESPSSRIVMGRVPDLGTG 1612
[2][TOP]
>UniRef100_Q00WA2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q00WA2_OSTTA
Length = 1789
Score = 154 bits (390), Expect = 3e-36
Identities = 75/118 (63%), Positives = 90/118 (76%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N V ++ T+GVEA RAT++ EVQ+VFS YGIGVD RHLSLI DFMT QG YR CNR G
Sbjct: 1659 SNSVWDIMQTFGVEAGRATLVSEVQAVFSVYGIGVDARHLSLIGDFMTQQGEYRPCNRSG 1718
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IE S+SPFLKMS+ETA FLT+AT+RG DDL SP++R+ VGR V LGTG L +
Sbjct: 1719 IEKSISPFLKMSYETATAFLTEATIRGETDDLSSPSSRIVVGRTVNLGTGSFSLKHDV 1776
[3][TOP]
>UniRef100_A4SAV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4SAV6_OSTLU
Length = 1663
Score = 153 bits (387), Expect = 6e-36
Identities = 75/118 (63%), Positives = 89/118 (75%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N V ++ T+GVEA R+T++ EVQ+VF YGIGVD RHLSLI DFMT QG YR CNR G
Sbjct: 1527 SNSVWDIMQTFGVEAGRSTLVSEVQAVFGVYGIGVDTRHLSLIGDFMTQQGEYRPCNRSG 1586
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IE S SPFLKMS+ETA FLTDAT+RG DDL SP++R+ VGR V+LGTG L I
Sbjct: 1587 IEKSTSPFLKMSYETATAFLTDATIRGETDDLSSPSSRIVVGRTVDLGTGSFSLKHDI 1644
[4][TOP]
>UniRef100_P15398 DNA-directed RNA polymerase I subunit rpa1 n=1
Tax=Schizosaccharomyces pombe RepID=RPA1_SCHPO
Length = 1689
Score = 152 bits (383), Expect = 2e-35
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L YGVEAAR I+ EV SVF YGI VDPRHLSLIAD+MT +GGY+A NR+G
Sbjct: 1566 TNDIAAILRIYGVEAARNAIVHEVSSVFGVYGIAVDPRHLSLIADYMTFEGGYKAFNRMG 1625
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
IE + SPF KMSFET HFLT+A LRG VDDL +P++RL VGRV GTG ++
Sbjct: 1626 IEYNTSPFAKMSFETTCHFLTEAALRGDVDDLSNPSSRLVVGRVGNFGTGSFDI 1679
[5][TOP]
>UniRef100_C1N756 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N756_9CHLO
Length = 1665
Score = 149 bits (375), Expect = 1e-34
Identities = 72/110 (65%), Positives = 87/110 (79%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV+AM+ TYGVEAAR T++ EV+ VF YGI VD RHLSLI DFM QG YR C+R G
Sbjct: 1531 TNDVYAMMQTYGVEAARETLVAEVRGVFGVYGIAVDARHLSLIGDFMMAQGDYRPCSRAG 1590
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
+E+S SP LKMSFETAA FL DAT+RG D L+SP+AR+ +GR V++GTG
Sbjct: 1591 METSTSPLLKMSFETAAAFLVDATMRGQEDTLESPSARIVLGRTVDMGTG 1640
[6][TOP]
>UniRef100_B6K3G0 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K3G0_SCHJY
Length = 1657
Score = 149 bits (375), Expect = 1e-34
Identities = 74/118 (62%), Positives = 89/118 (75%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L YGVEAAR I+RE+ SVF YGI VD RHLSLIAD+MT +GGY+A NR+G
Sbjct: 1536 TNDIAAVLRIYGVEAARNAIVREISSVFGVYGIDVDHRHLSLIADYMTFEGGYKAFNRMG 1595
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IE S SPF KMSFET HFLTDA L GS D++ +P+ARL VGRV GTG +L+ +
Sbjct: 1596 IEYSTSPFAKMSFETTCHFLTDAALSGSKDEVMNPSARLVVGRVGNFGTGSFDLLTPV 1653
[7][TOP]
>UniRef100_B9SL65 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SL65_RICCO
Length = 1686
Score = 148 bits (373), Expect = 2e-34
Identities = 70/119 (58%), Positives = 95/119 (79%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N++HAML TYGVEAAR TI+RE+ VF +YGI V RHLSLIADFMTH GGYR +R+
Sbjct: 1566 SNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMG 1625
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI S+SPF KMSFETA+ F+ +A L G +D+L++P+AR+C+G V++GTG +L+Q++
Sbjct: 1626 GIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684
[8][TOP]
>UniRef100_UPI0001983DA2 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983DA2
Length = 1740
Score = 146 bits (369), Expect = 7e-34
Identities = 73/119 (61%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N+VHAML T+GVEAARATI++EV +VF+AYG+ V+ RHLSLIADFMTH GGYR NR
Sbjct: 1620 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1679
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI SVSPF KM+FETA+ F+ +A G D+L+S +AR+C+G V++GTGC +L+Q+I
Sbjct: 1680 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1738
[9][TOP]
>UniRef100_A7PWB4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PWB4_VITVI
Length = 1518
Score = 146 bits (369), Expect = 7e-34
Identities = 73/119 (61%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N+VHAML T+GVEAARATI++EV +VF+AYG+ V+ RHLSLIADFMTH GGYR NR
Sbjct: 1398 SNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHG 1457
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI SVSPF KM+FETA+ F+ +A G D+L+S +AR+C+G V++GTGC +L+Q+I
Sbjct: 1458 GIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1516
[10][TOP]
>UniRef100_B3S2I6 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S2I6_TRIAD
Length = 1724
Score = 146 bits (368), Expect = 9e-34
Identities = 69/118 (58%), Positives = 89/118 (75%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++HAM TYG+EAA I++E+++VF YGI V+ RHLSLIAD+MT++G YR NR+G
Sbjct: 1604 TNEIHAMASTYGIEAAYRAIIKEIENVFRVYGIDVNYRHLSLIADYMTYEGSYRPLNRLG 1663
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ S SPF KMSFET HFL +AT G +D LKSP++RL GRVV GTGC +LVQ +
Sbjct: 1664 MASCSSPFQKMSFETTVHFLREATAHGEIDVLKSPSSRLVTGRVVNGGTGCFDLVQPL 1721
[11][TOP]
>UniRef100_A7S9W9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nematostella vectensis
RepID=A7S9W9_NEMVE
Length = 1242
Score = 146 bits (368), Expect = 9e-34
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+HA+ TYG+EAA I +EV++VF YGI VDPRHL+L++D+MT++G +A NRIG
Sbjct: 1124 TNDIHAVARTYGIEAAARAITKEVKNVFGGYGIHVDPRHLTLVSDYMTYEGKIKAFNRIG 1183
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IESS SPF KMSFET HFL A L G ++ LKSP++RL VGRVV GTG EL+Q +
Sbjct: 1184 IESSASPFQKMSFETTTHFLRGAVLSGDMESLKSPSSRLVVGRVVGGGTGSFELLQPL 1241
[12][TOP]
>UniRef100_C3ZBW5 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZBW5_BRAFL
Length = 1731
Score = 143 bits (361), Expect = 6e-33
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N +HAM TYG+EAA I++E++ VF+ YGI VDPRHLSL+AD+MT++G Y+ NR G
Sbjct: 1613 SNHIHAMANTYGIEAACRIIVKEIKEVFAVYGIEVDPRHLSLVADYMTYEGVYKPFNRTG 1672
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+S+ SPF +MSFET+ FL +AT+ G+ DDLKSP+ARL GR V GTGC EL+Q +
Sbjct: 1673 IQSNASPFQQMSFETSMQFLKEATISGAKDDLKSPSARLVTGRPVMGGTGCFELLQPL 1730
[13][TOP]
>UniRef100_B9HA71 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HA71_POPTR
Length = 464
Score = 140 bits (354), Expect = 4e-32
Identities = 67/119 (56%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N +H ML YGVEAAR TI+RE++ VF++YGI V+ RHLSLIAD+MTH G YR +RI
Sbjct: 344 SNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIG 403
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI S+SP KMSFETA+ F+ +A L G VD+L++P+AR+C+G V++GTG +L+Q++
Sbjct: 404 GISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 462
[14][TOP]
>UniRef100_UPI00006A0029 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed
RNA polymerase I largest subunit) (RNA polymerase I 194
kDa subunit) (RPA194) (A190). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A0029
Length = 1733
Score = 134 bits (338), Expect = 3e-30
Identities = 64/116 (55%), Positives = 88/116 (75%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+H M T+G+EAA + RE++ VF+ YGI VDPRHLSL+AD+M +G Y+ NRIG
Sbjct: 1615 SNDIHTMAKTFGIEAALRVVEREIKDVFAVYGIEVDPRHLSLVADYMCFEGTYKPLNRIG 1674
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
++SS SPF +M+FET+ FL DAT+ G+ DDL+SP+A L VG+VV+ GTG +L Q
Sbjct: 1675 MQSSSSPFQQMTFETSYKFLKDATMNGARDDLQSPSACLVVGKVVKGGTGLFDLKQ 1730
[15][TOP]
>UniRef100_Q3UZ02 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3UZ02_MOUSE
Length = 742
Score = 134 bits (338), Expect = 3e-30
Identities = 66/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 624 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 683
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 684 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 741
[16][TOP]
>UniRef100_Q3UHI3 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q3UHI3_MOUSE
Length = 1717
Score = 134 bits (338), Expect = 3e-30
Identities = 66/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
[17][TOP]
>UniRef100_O35134 DNA-directed RNA polymerase I subunit RPA1 n=2 Tax=Mus musculus
RepID=RPA1_MOUSE
Length = 1717
Score = 134 bits (338), Expect = 3e-30
Identities = 66/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
[18][TOP]
>UniRef100_Q0DAZ6 Os06g0612200 protein n=2 Tax=Oryza sativa Japonica Group
RepID=Q0DAZ6_ORYSJ
Length = 237
Score = 134 bits (337), Expect = 4e-30
Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G
Sbjct: 111 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 170
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
+ + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q
Sbjct: 171 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 227
[19][TOP]
>UniRef100_Q8UVY7 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis RepID=Q8UVY7_XENLA
Length = 1730
Score = 134 bits (337), Expect = 4e-30
Identities = 64/116 (55%), Positives = 89/116 (76%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ T+G+EAA + +E++ VF+ YGI VDPRHLSL+AD+M +G YR NRIG
Sbjct: 1612 SNDIHAIANTFGIEAALRVVEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGTYRPLNRIG 1671
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
++SS SPF +M+FET+ FL DAT+ G+ DDL+SP+A L VG+VV+ GTG +L Q
Sbjct: 1672 MQSSSSPFQQMTFETSYKFLKDATMNGARDDLQSPSACLVVGKVVKGGTGLFDLKQ 1727
[20][TOP]
>UniRef100_Q69X40 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q69X40_ORYSJ
Length = 1748
Score = 134 bits (337), Expect = 4e-30
Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G
Sbjct: 1622 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 1681
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
+ + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q
Sbjct: 1682 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 1738
[21][TOP]
>UniRef100_C5YUX4 Putative uncharacterized protein Sb09g027230 n=1 Tax=Sorghum
bicolor RepID=C5YUX4_SORBI
Length = 311
Score = 134 bits (337), Expect = 4e-30
Identities = 68/120 (56%), Positives = 86/120 (71%), Gaps = 1/120 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+HA+L TYGVEAAR TI+ EV VF YGI VD RHLS+IADFMT GGYR NRI
Sbjct: 184 TSNDIHAILKTYGVEAARNTIINEVSGVFKPYGIDVDMRHLSMIADFMTLDGGYRPMNRI 243
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI + S SPF KM+FETA F+ +A G D L+ P+A +C+G+ ++GTG L+Q +
Sbjct: 244 GIGQFSTSPFGKMTFETATKFIVEAATHGEADFLECPSASVCLGKPPKVGTGIFGLLQNL 303
[22][TOP]
>UniRef100_B9FU47 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FU47_ORYSJ
Length = 209
Score = 134 bits (337), Expect = 4e-30
Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G
Sbjct: 83 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 142
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
+ + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q
Sbjct: 143 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 199
[23][TOP]
>UniRef100_B8B4L0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8B4L0_ORYSI
Length = 1350
Score = 134 bits (337), Expect = 4e-30
Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAML TYGVEAARATI+ EV+ VF AYGI VD RHL+LIADFMT GGYR +R+G
Sbjct: 1224 SNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHVDMRHLNLIADFMTFDGGYRPMSRLG 1283
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
+ + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q
Sbjct: 1284 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASVCLGKPVKVGTGSFGLLQ 1340
[24][TOP]
>UniRef100_C0JAC0 DNA-directed RNA polymerase n=1 Tax=Oryza coarctata
RepID=C0JAC0_ORYCO
Length = 1830
Score = 133 bits (335), Expect = 6e-30
Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAML YGVEAARATI++EV VFSAYGI VD RHL++IADFMT GGYR +R G
Sbjct: 1704 SNDIHAMLKIYGVEAARATIIQEVSGVFSAYGINVDMRHLNMIADFMTFDGGYRPMSRQG 1763
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 169
+ + S SPF KM+FETA F+ +A G D L P+A +C+G+ V++GTG L+Q
Sbjct: 1764 MGQFSTSPFGKMTFETATKFIVEAASHGESDTLDGPSASICLGKPVKMGTGSFGLLQ 1820
[25][TOP]
>UniRef100_UPI00002506FD DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed
RNA polymerase I largest subunit) (RNA polymerase I 194
kDa subunit) (RPA194) (A194). n=1 Tax=Rattus norvegicus
RepID=UPI00002506FD
Length = 1716
Score = 133 bits (334), Expect = 8e-30
Identities = 65/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1598 SNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1657
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1658 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
[26][TOP]
>UniRef100_Q0U0A2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U0A2_PHANO
Length = 1691
Score = 133 bits (334), Expect = 8e-30
Identities = 67/123 (54%), Positives = 88/123 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ ML YGVEA RATI+RE+ +VFS +GI VD RHL+LIAD MT GG+ NRIG
Sbjct: 1544 TNDIVGMLQLYGVEACRATIVREMHAVFSGHGISVDLRHLNLIADTMTKGGGFTPFNRIG 1603
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
++++VSPF KMSFET FL DA L DDL +P+AR+ VGR+ +LGTG +++ +
Sbjct: 1604 LKTNVSPFSKMSFETTVGFLKDAVLERDWDDLSNPSARIVVGRLGKLGTGAFDVLAPVNV 1663
Query: 156 LAP 148
+ P
Sbjct: 1664 IDP 1666
[27][TOP]
>UniRef100_O54889 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Rattus norvegicus
RepID=RPA1_RAT
Length = 1716
Score = 133 bits (334), Expect = 8e-30
Identities = 65/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1598 SNDIHAVANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1657
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1658 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1715
[28][TOP]
>UniRef100_UPI0000EBD25A PREDICTED: similar to polymerase (RNA) I polypeptide A, 194kDa n=1
Tax=Bos taurus RepID=UPI0000EBD25A
Length = 1717
Score = 132 bits (333), Expect = 1e-29
Identities = 65/118 (55%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1599 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL ATL GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1659 IRSNSSPLQQMTFETSFQFLKQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1716
[29][TOP]
>UniRef100_UPI000179E6F1 UPI000179E6F1 related cluster n=1 Tax=Bos taurus RepID=UPI000179E6F1
Length = 1729
Score = 132 bits (333), Expect = 1e-29
Identities = 65/118 (55%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1611 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1670
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL ATL GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1671 IRSNSSPLQQMTFETSFQFLKQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1728
[30][TOP]
>UniRef100_Q5KIF6 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KIF6_CRYNE
Length = 1727
Score = 132 bits (332), Expect = 1e-29
Identities = 64/115 (55%), Positives = 84/115 (73%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
++ND++A+L T+GVEAAR I+ EV SVF AYGI VD RHL++IAD+MTH GG+R NR
Sbjct: 1607 SSNDIYAILQTFGVEAARRAIIDEVSSVFGAYGIAVDYRHLTIIADYMTHAGGFRPFNRT 1666
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI + SP LK SFET FL++ATL G DDL SPAA++ +G+ GTG ++
Sbjct: 1667 GISAKSSPLLKASFETTVAFLSEATLHGDFDDLTSPAAKIVMGKPSASGTGAFDI 1721
[31][TOP]
>UniRef100_Q86H36 DNA-directed RNA polymerase I subunit rpa1 n=1 Tax=Dictyostelium
discoideum RepID=RPA1_DICDI
Length = 1615
Score = 132 bits (332), Expect = 1e-29
Identities = 62/118 (52%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND++A+L YGVEA R + E+ +VF+AYGI VD RHL L+ D+MT +GGYRA NRIG
Sbjct: 1497 TNDIYAILQKYGVEACRQAVTSEISNVFAAYGISVDKRHLILLGDYMTFEGGYRALNRIG 1556
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IE++ SPF KMSFET FL+ A+L G D + SP++R+ +G++V+ GTG +V +
Sbjct: 1557 IENNTSPFQKMSFETTFSFLSKASLMGDYDTVTSPSSRIVLGQIVKNGTGSFTIVAPV 1614
[32][TOP]
>UniRef100_UPI00005A33A4 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit
(RNA polymerase I 194 kDa subunit) (RPA194) n=1 Tax=Canis
lupus familiaris RepID=UPI00005A33A4
Length = 1699
Score = 132 bits (331), Expect = 2e-29
Identities = 64/118 (54%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1581 SNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1640
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1641 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1698
[33][TOP]
>UniRef100_UPI0000EB2786 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed
RNA polymerase I largest subunit) (RNA polymerase I 194
kDa subunit) (RPA194) (A190). n=1 Tax=Canis lupus
familiaris RepID=UPI0000EB2786
Length = 1726
Score = 132 bits (331), Expect = 2e-29
Identities = 64/118 (54%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1608 SNDIHAMASTYGIEAALRVIEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1667
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1668 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1725
[34][TOP]
>UniRef100_UPI0001797135 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa n=1 Tax=Equus
caballus RepID=UPI0001797135
Length = 1719
Score = 131 bits (330), Expect = 2e-29
Identities = 64/118 (54%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1601 SNDIHAMASTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1660
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 1661 IRSNSSPLQQMTFETSFQFLKQATMMGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1718
[35][TOP]
>UniRef100_UPI0000E1F513 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa isoform 4 n=1
Tax=Pan troglodytes RepID=UPI0000E1F513
Length = 1515
Score = 131 bits (329), Expect = 3e-29
Identities = 64/118 (54%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1397 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1456
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1457 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1514
[36][TOP]
>UniRef100_UPI0000E1F511 PREDICTED: hypothetical protein isoform 1 n=1 Tax=Pan troglodytes
RepID=UPI0000E1F511
Length = 1662
Score = 131 bits (329), Expect = 3e-29
Identities = 64/118 (54%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1544 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1603
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1604 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1661
[37][TOP]
>UniRef100_UPI0000E1F510 PREDICTED: polymerase (RNA) I polypeptide A, 194kDa isoform 3 n=2
Tax=Pan troglodytes RepID=UPI0000E1F510
Length = 1723
Score = 131 bits (329), Expect = 3e-29
Identities = 64/118 (54%), Positives = 86/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1605 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1664
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1665 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1722
[38][TOP]
>UniRef100_B2VT60 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VT60_PYRTR
Length = 1790
Score = 131 bits (329), Expect = 3e-29
Identities = 65/118 (55%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ AML YGVEA RATI+RE+ +VFS +GI VD RHL+LIAD MT GG+ +RIG
Sbjct: 1587 TNDIAAMLRIYGVEAGRATIVREMHNVFSGHGISVDHRHLNLIADTMTKGGGFTPFSRIG 1646
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ +VSPF+KMSFET FL DA L D+LK+P+AR+ VGR+ +GTG +++ +
Sbjct: 1647 LKGNVSPFMKMSFETTVGFLKDAVLERDWDELKNPSARIVVGRLGGIGTGAFDVLAPV 1704
[39][TOP]
>UniRef100_C5LXY1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LXY1_9ALVE
Length = 1775
Score = 130 bits (328), Expect = 4e-29
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G
Sbjct: 1632 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1691
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169
+E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ +
Sbjct: 1692 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1751
Query: 168 QIGGLA 151
+ GLA
Sbjct: 1752 SVRGLA 1757
[40][TOP]
>UniRef100_C5KZW7 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KZW7_9ALVE
Length = 1774
Score = 130 bits (328), Expect = 4e-29
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G
Sbjct: 1631 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1690
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169
+E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ +
Sbjct: 1691 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1750
Query: 168 QIGGLA 151
+ GLA
Sbjct: 1751 SVRGLA 1756
[41][TOP]
>UniRef100_C5KJT1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KJT1_9ALVE
Length = 1549
Score = 130 bits (328), Expect = 4e-29
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G
Sbjct: 1406 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1465
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169
+E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ +
Sbjct: 1466 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQASVGTGCFDLRMEMPK 1525
Query: 168 QIGGLA 151
+ GLA
Sbjct: 1526 SVRGLA 1531
[42][TOP]
>UniRef100_B2B231 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2B231_PODAN
Length = 1706
Score = 130 bits (326), Expect = 7e-29
Identities = 64/118 (54%), Positives = 84/118 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAARA I+RE+ VF ++GI VD RHLSLIAD+MT GG+ NRIG
Sbjct: 1580 TNDIAQVLEFYGVEAARANIVRELSGVFDSHGIAVDKRHLSLIADYMTRNGGFSPFNRIG 1639
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ +VSPF KMS+ET FL DA + G D L +P++RL VG++ LGTG +L+ Q+
Sbjct: 1640 LTGNVSPFTKMSYETTVGFLKDAVMDGEWDPLMTPSSRLVVGKLGGLGTGAFDLLTQV 1697
[43][TOP]
>UniRef100_A3LYS3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LYS3_PICST
Length = 1644
Score = 130 bits (326), Expect = 7e-29
Identities = 64/120 (53%), Positives = 85/120 (70%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ VF YGI V RHL L+ D MT +G Y A NR
Sbjct: 1523 TSNDVAAVLRTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLLGDMMTREGTYLAFNRQ 1582
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ Q+G
Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREDLESPSARIVLGKLSNVGTGSFDVLAQLG 1642
[44][TOP]
>UniRef100_Q5RAX8 DNA-directed RNA polymerase n=1 Tax=Pongo abelii RepID=Q5RAX8_PONAB
Length = 1659
Score = 129 bits (325), Expect = 9e-29
Identities = 64/118 (54%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M G Y+ NR G
Sbjct: 1541 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFGGVYKPLNRFG 1600
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV+ GTG EL Q +
Sbjct: 1601 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPL 1658
[45][TOP]
>UniRef100_C5KQT6 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KQT6_9ALVE
Length = 1662
Score = 129 bits (324), Expect = 1e-28
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAARA I++EV VF YGIGVDPRHL LI+D+MTH GG+R +R G
Sbjct: 1480 TNDIGLILDRYGVEAARAAIVQEVLRVFGHYGIGVDPRHLMLISDYMTHHGGFRPFSRRG 1539
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169
+E+ SP+L+M+FET+ +FLT A D LKSPA + VG+ +GTGC +E+ +
Sbjct: 1540 MEAHASPWLQMTFETSVNFLTKACNNAQYDTLKSPAGSIIVGKQACVGTGCFDLRMEMPK 1599
Query: 168 QIGGLA 151
+ GLA
Sbjct: 1600 SVRGLA 1605
[46][TOP]
>UniRef100_Q9H6T2 cDNA: FLJ21915 fis, clone HEP03920 n=1 Tax=Homo sapiens
RepID=Q9H6T2_HUMAN
Length = 495
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 377 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 436
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 437 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 494
[47][TOP]
>UniRef100_Q96AG9 POLR1A protein (Fragment) n=1 Tax=Homo sapiens RepID=Q96AG9_HUMAN
Length = 574
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 456 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 515
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 516 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 573
[48][TOP]
>UniRef100_B9ZVN9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B9ZVN9_HUMAN
Length = 1659
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1541 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1600
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 1601 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1658
[49][TOP]
>UniRef100_B7ZKR9 DNA-directed RNA polymerase n=3 Tax=Homo sapiens RepID=B7ZKR9_HUMAN
Length = 1720
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1602 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1661
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 1662 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719
[50][TOP]
>UniRef100_O95602 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Homo sapiens
RepID=RPA1_HUMAN
Length = 1720
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1602 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1661
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ FL AT+ GS D+L+SP+A L VG+VV GTG EL Q +
Sbjct: 1662 IRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL 1719
[51][TOP]
>UniRef100_B7S4C1 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7S4C1_PHATR
Length = 1674
Score = 129 bits (323), Expect = 2e-28
Identities = 61/110 (55%), Positives = 83/110 (75%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ A+ YGVEAAR++I+++++ VF AYGI VDPRHLSLIAD+MT GGY+A NRIG
Sbjct: 1558 SNDIWAIRCAYGVEAARSSIVQQIRGVFGAYGIEVDPRHLSLIADYMTFDGGYKAMNRIG 1617
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
+E + S L+MSFET HFL A L +D+++SP+A + VGR + GTG
Sbjct: 1618 MEETSSTLLQMSFETTLHFLRQAALVEDMDEMQSPSANIVVGRPIRHGTG 1667
[52][TOP]
>UniRef100_UPI000151B566 hypothetical protein PGUG_03709 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B566
Length = 1632
Score = 128 bits (322), Expect = 2e-28
Identities = 62/120 (51%), Positives = 86/120 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ A+L TYGVEAAR TI+ E+ +VF Y I V RHL LI D MT +G Y A NR
Sbjct: 1512 TSNDIAAVLKTYGVEAARNTIVNEINNVFDRYAISVSSRHLDLIGDMMTREGTYLAFNRQ 1571
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
GI+SS S F+KMS+ET FLT A L G+ +DL+SP+A++ VG++ +GTG +++ ++G
Sbjct: 1572 GIDSSTSAFMKMSYETTCQFLTKAVLDGTTEDLESPSAQIVVGKLSNVGTGSFDVLAKMG 1631
[53][TOP]
>UniRef100_A5DKA8 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DKA8_PICGU
Length = 1632
Score = 128 bits (322), Expect = 2e-28
Identities = 62/120 (51%), Positives = 86/120 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ A+L TYGVEAAR TI+ E+ +VF Y I V RHL LI D MT +G Y A NR
Sbjct: 1512 TSNDIAAVLKTYGVEAARNTIVNEINNVFDRYAISVSSRHLDLIGDMMTREGTYLAFNRQ 1571
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
GI+SS S F+KMS+ET FLT A L G+ +DL+SP+A++ VG++ +GTG +++ ++G
Sbjct: 1572 GIDSSTSAFMKMSYETTCQFLTKAVLDGTTEDLESPSAQIVVGKLSNVGTGSFDVLAKMG 1631
[54][TOP]
>UniRef100_Q59LW3 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q59LW3_CANAL
Length = 1665
Score = 128 bits (321), Expect = 3e-28
Identities = 63/119 (52%), Positives = 85/119 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR
Sbjct: 1544 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1603
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+
Sbjct: 1604 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1662
[55][TOP]
>UniRef100_C4YCY1 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YCY1_CANAL
Length = 1577
Score = 128 bits (321), Expect = 3e-28
Identities = 63/119 (52%), Positives = 85/119 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR
Sbjct: 1456 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1515
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+
Sbjct: 1516 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1574
[56][TOP]
>UniRef100_B9W974 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9W974_CANDC
Length = 1656
Score = 128 bits (321), Expect = 3e-28
Identities = 63/119 (52%), Positives = 85/119 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV+A+L TYGVEAAR TI+ E+ VF YGI V RHL LIAD MT +G Y A NR
Sbjct: 1535 TSNDVYAVLKTYGVEAARNTIVNEIYRVFDTYGISVSSRHLDLIADMMTREGTYLAFNRQ 1594
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+
Sbjct: 1595 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1653
[57][TOP]
>UniRef100_C5MB39 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MB39_CANTT
Length = 845
Score = 127 bits (320), Expect = 3e-28
Identities = 61/119 (51%), Positives = 86/119 (72%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND++A+L TYGVEAAR TI+ E+ VF+ YGI V RHL LIAD MT +G Y A NR
Sbjct: 723 TSNDIYAVLKTYGVEAARNTIVNEIYRVFNTYGISVSSRHLDLIADMMTREGTYLAFNRQ 782
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G ++L+SP++++ +G++ +GTG ++ Q+
Sbjct: 783 GIDSSTSAFMKMSYETTCQFLTKAVLDGDREELESPSSKIVMGKLASVGTGSFDVFAQM 841
[58][TOP]
>UniRef100_C4YAX5 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4YAX5_CLAL4
Length = 1248
Score = 127 bits (320), Expect = 3e-28
Identities = 64/122 (52%), Positives = 86/122 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT +G Y A NR G
Sbjct: 1127 SNDISAVLRTYGVEAARNTIVNEINNVFSTYAISVSSRHLDLIADMMTREGSYLAFNRQG 1186
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
I+SS S F KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ Q+
Sbjct: 1187 IDSSTSAFKKMSYETTCQFLTKAVLDGDREDLESPSARIVMGKLSNVGTGSFDVMAQMPT 1246
Query: 156 LA 151
+A
Sbjct: 1247 VA 1248
[59][TOP]
>UniRef100_UPI0000E804C6 PREDICTED: similar to RNA polymerase I 194 kDa subunit n=1 Tax=Gallus
gallus RepID=UPI0000E804C6
Length = 1286
Score = 127 bits (319), Expect = 5e-28
Identities = 59/118 (50%), Positives = 88/118 (74%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1168 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 1227
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q +
Sbjct: 1228 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 1285
[60][TOP]
>UniRef100_UPI0000ECC671 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6)
(DNA-directed RNA polymerase I largest subunit) (RNA
polymerase I 194 kDa subunit) (RPA194) (A190). n=1
Tax=Gallus gallus RepID=UPI0000ECC671
Length = 745
Score = 127 bits (319), Expect = 5e-28
Identities = 59/118 (50%), Positives = 88/118 (74%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 627 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 686
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q +
Sbjct: 687 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 744
[61][TOP]
>UniRef100_UPI0000ECC670 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed
RNA polymerase I largest subunit) (RNA polymerase I 194
kDa subunit) (RPA194) (A190). n=1 Tax=Gallus gallus
RepID=UPI0000ECC670
Length = 917
Score = 127 bits (319), Expect = 5e-28
Identities = 59/118 (50%), Positives = 88/118 (74%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM YG+E+A +++E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 799 SNDIHAMAKNYGIESALRVVIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGVYKPMNRFG 858
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+SS SP +M+FET+ FL +AT+ G+ D+L+SP+A L +G+VV+ GTG +L Q +
Sbjct: 859 IQSSSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVLGKVVKGGTGLFDLKQPL 916
[62][TOP]
>UniRef100_Q6C1S4 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6C1S4_YARLI
Length = 1628
Score = 127 bits (319), Expect = 5e-28
Identities = 61/114 (53%), Positives = 85/114 (74%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++A+L TYGVEAAR T+++E+ +VF Y I V+ RHL LIAD MT +G Y A NR+G
Sbjct: 1505 SNDIYAVLKTYGVEAARNTMVQEINNVFKTYAITVNLRHLELIADMMTREGTYLAFNRMG 1564
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
++S+ SPFLKMS+ET FLT A L G D L+SP+AR+ +GR+ +GTG ++
Sbjct: 1565 VDSNTSPFLKMSYETTCGFLTKAVLDGGCDALESPSARIVIGRLSGVGTGSFDV 1618
[63][TOP]
>UniRef100_C5JKG0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081
RepID=C5JKG0_AJEDS
Length = 1645
Score = 127 bits (319), Expect = 5e-28
Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + ML+ YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G
Sbjct: 1526 TNSIADMLLMYGVEAARASIIREMAAVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1585
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ S SPF+KMSFET FL DA L D+L SP++R+ +GRV +GTG +++ +G
Sbjct: 1586 LVKDSTSPFMKMSFETTVGFLRDAVLERDWDNLDSPSSRIVMGRVGTIGTGAFDVLAPVG 1645
[64][TOP]
>UniRef100_C5G7Q4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5G7Q4_AJEDR
Length = 1646
Score = 127 bits (319), Expect = 5e-28
Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + ML+ YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G
Sbjct: 1527 TNSIADMLLMYGVEAARASIIREMAAVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1586
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ S SPF+KMSFET FL DA L D+L SP++R+ +GRV +GTG +++ +G
Sbjct: 1587 LVKDSTSPFMKMSFETTVGFLRDAVLERDWDNLDSPSSRIVMGRVGTIGTGAFDVLAPVG 1646
[65][TOP]
>UniRef100_A8NX07 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NX07_COPC7
Length = 138
Score = 127 bits (318), Expect = 6e-28
Identities = 62/117 (52%), Positives = 83/117 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++A+L TYGVE ARA I++EV VF+AY I VD RHL LIAD+MT GGY+ NR G
Sbjct: 20 SNDIYALLKTYGVEMARAAILKEVGGVFAAYSIQVDRRHLELIADYMTFDGGYKPFNRKG 79
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ ++ SP LK S+ET A FL+DATL G DDL +P+ + +GR GTG +++ Q
Sbjct: 80 LSTNPSPLLKASYETTAAFLSDATLYGDFDDLTTPSGNIVLGRPNATGTGVFDVLMQ 136
[66][TOP]
>UniRef100_A7EW95 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EW95_SCLS1
Length = 1705
Score = 126 bits (317), Expect = 8e-28
Identities = 60/119 (50%), Positives = 87/119 (73%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TND+ AML YGVEA R+TI++E+ SVF+ + I VD RHL+LIAD+MT GG+ NR
Sbjct: 1575 STNDIAAMLENYGVEACRSTIVQELHSVFAGHAIQVDMRHLNLIADYMTRGGGFSPFNRN 1634
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G++ SVSPF+KMSFET FL DA DDL +P++R+ +GR+ ++GTG +++ ++
Sbjct: 1635 GMKGSVSPFMKMSFETTVGFLADAVAECDWDDLANPSSRIVIGRMSKVGTGAFDVLTKV 1693
[67][TOP]
>UniRef100_A5DSZ8 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5DSZ8_LODEL
Length = 1668
Score = 126 bits (317), Expect = 8e-28
Identities = 61/119 (51%), Positives = 84/119 (70%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ ++L TYGVEAAR TI+ E+ VF YGI V P HL LIAD MT +G Y A NR
Sbjct: 1545 TSNDIASVLRTYGVEAARNTIVNEIYRVFDTYGISVSPHHLELIADMMTREGSYLAFNRQ 1604
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G ++L+SP+A++ +G++ +GTG ++ Q+
Sbjct: 1605 GIDSSTSSFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQM 1663
[68][TOP]
>UniRef100_UPI0001760178 PREDICTED: polymerase (RNA) I polypeptide A n=1 Tax=Danio rerio
RepID=UPI0001760178
Length = 1692
Score = 126 bits (316), Expect = 1e-27
Identities = 62/118 (52%), Positives = 84/118 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1574 SNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFG 1633
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+S+ SP +M+FET+ FL AT+ GS D L SP+A L VG+VV+ GTG +L Q +
Sbjct: 1634 IQSNSSPLQQMTFETSFKFLKQATMLGSYDKLSSPSACLVVGKVVKGGTGIFDLKQPL 1691
[69][TOP]
>UniRef100_UPI0001A2CE6F UPI0001A2CE6F related cluster n=1 Tax=Danio rerio
RepID=UPI0001A2CE6F
Length = 732
Score = 126 bits (316), Expect = 1e-27
Identities = 62/118 (52%), Positives = 84/118 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 614 SNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFG 673
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+S+ SP +M+FET+ FL AT+ GS D L SP+A L VG+VV+ GTG +L Q +
Sbjct: 674 IQSNSSPLQQMTFETSFKFLKQATMLGSYDKLSSPSACLVVGKVVKGGTGIFDLKQPL 731
[70][TOP]
>UniRef100_A4RCX8 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RCX8_MAGGR
Length = 1719
Score = 126 bits (316), Expect = 1e-27
Identities = 63/118 (53%), Positives = 83/118 (70%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TNDV A+L YGVEA RA I+RE+++VF ++ I VD RHL+LIAD MT GG+ NR+
Sbjct: 1590 STNDVAAVLEIYGVEACRANIIRELRAVFESHAITVDNRHLNLIADHMTRSGGFTPFNRM 1649
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
G+ +VSPF KMSFET FL DA L G DDL +P+ RL +GR+ +GTG ++ Q
Sbjct: 1650 GLSGNVSPFTKMSFETTLAFLKDAVLDGDWDDLSTPSGRLVMGRLGHVGTGAFDVFTQ 1707
[71][TOP]
>UniRef100_Q1E235 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E235_COCIM
Length = 1690
Score = 125 bits (315), Expect = 1e-27
Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GG+R NR+G
Sbjct: 1571 SNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGFRPFNRMG 1630
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
I + S SPF+KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G
Sbjct: 1631 IVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1690
[72][TOP]
>UniRef100_C5PA97 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PA97_COCP7
Length = 1690
Score = 125 bits (315), Expect = 1e-27
Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GG+R NR+G
Sbjct: 1571 SNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGFRPFNRMG 1630
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
I + S SPF+KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G
Sbjct: 1631 IVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1690
[73][TOP]
>UniRef100_UPI000155D146 PREDICTED: similar to RNA polymerase I 194 kDa subunit n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155D146
Length = 560
Score = 125 bits (314), Expect = 2e-27
Identities = 62/118 (52%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 442 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIQVDPRHLSLVADYMCFEGVYKPLNRYG 501
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+S+ SP +M+FET+ FL AT G D+L+SP+A L VG+VV+ GTG +L Q +
Sbjct: 502 IQSNSSPLQQMTFETSFKFLKQATHDGVSDELRSPSACLVVGKVVKGGTGLFDLKQPL 559
[74][TOP]
>UniRef100_UPI00003BD73B hypothetical protein DEHA0C11682g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD73B
Length = 1644
Score = 125 bits (314), Expect = 2e-27
Identities = 62/119 (52%), Positives = 85/119 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
++ND+ A+L TYGVEAAR TI+ EVQ+VF Y I V RHL LI D MT +G Y A NR
Sbjct: 1523 SSNDIAAVLRTYGVEAARNTIVNEVQNVFDRYAIAVSSRHLDLIGDMMTREGTYLAFNRQ 1582
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ ++
Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGEREDLESPSARIVMGKLSNVGTGSFDVLARM 1641
[75][TOP]
>UniRef100_Q9SVY0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9SVY0_ARATH
Length = 1670
Score = 125 bits (314), Expect = 2e-27
Identities = 61/119 (51%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N +H ML +GVEAAR TI+RE+ VF +YGI V RHL+LIAD+MT GGYR +R+
Sbjct: 1550 SNSIHDMLNIFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMG 1609
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI S SPF +M+FETA F+ A G D L++P+AR+C+G GTGC +L+Q++
Sbjct: 1610 GIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRV 1668
[76][TOP]
>UniRef100_Q759A3 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q759A3_ASHGO
Length = 1640
Score = 125 bits (314), Expect = 2e-27
Identities = 63/119 (52%), Positives = 84/119 (70%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1518 TSNDVSAVLKTYGVEAARNTIVNEINNVFSRYAISVSYRHLDLIADMMTRQGTYLAFNRQ 1577
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ESS S +KMS+ET FLT A L ++LKSP+A+L +G++ +GTG +++ ++
Sbjct: 1578 GMESSTSSLMKMSYETTCQFLTKAVLDNEREELKSPSAKLVLGKLNSVGTGAFDILAKV 1636
[77][TOP]
>UniRef100_B5RT96 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RT96_DEBHA
Length = 1644
Score = 125 bits (314), Expect = 2e-27
Identities = 62/119 (52%), Positives = 85/119 (71%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
++ND+ A+L TYGVEAAR TI+ EVQ+VF Y I V RHL LI D MT +G Y A NR
Sbjct: 1523 SSNDIAAVLRTYGVEAARNTIVNEVQNVFDRYAIAVSSRHLDLIGDMMTREGTYLAFNRQ 1582
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+SS S F+KMS+ET FLT A L G +DL+SP+AR+ +G++ +GTG +++ ++
Sbjct: 1583 GIDSSTSAFMKMSYETTCQFLTKAVLDGEREDLESPSARIVMGKLSNVGTGSFDVLARM 1641
[78][TOP]
>UniRef100_B8M0T3 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M0T3_TALSN
Length = 1689
Score = 125 bits (313), Expect = 2e-27
Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAAR+TI+RE+ VFS + I VD RHL+LI D MTH GG+++ +R G
Sbjct: 1570 TNSIHDMLIFYGVEAARSTIIREMSDVFSGHSITVDNRHLNLIGDVMTHSGGFKSYSRNG 1629
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I+ S SPF K SFET+ F+ DA L DDLKSP++R+ VGR+ +GTG +++ +
Sbjct: 1630 LIKESNSPFSKSSFETSVGFMRDAVLERDFDDLKSPSSRIVVGRLGNVGTGAFDILAPV 1688
[79][TOP]
>UniRef100_UPI000023EF7C hypothetical protein FG04291.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023EF7C
Length = 1694
Score = 124 bits (312), Expect = 3e-27
Identities = 61/118 (51%), Positives = 83/118 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L YGVEAAR I+ E+ VF ++GI VD RHL+LI D MT GG+ NR+G
Sbjct: 1568 TNDIAAVLEVYGVEAARQNIVNELDGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMG 1627
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ +VSPF KMSFET FL DA L G DDL +P+ RL +GR+ ++GTG +++ Q+
Sbjct: 1628 LKGNVSPFTKMSFETTLGFLKDAVLDGDWDDLSTPSGRLVMGRLGKVGTGGFDVLAQL 1685
[80][TOP]
>UniRef100_Q8WZX8 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q8WZX8_NEUCR
Length = 1701
Score = 124 bits (312), Expect = 3e-27
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YGVEAAR +I+RE+ VF +GIGVDPRHL+LI D+MT GG+ NR+G
Sbjct: 1575 TNDIAQVLEIYGVEAARNSIVRELSGVFKGHGIGVDPRHLNLIGDYMTRNGGFTPFNRMG 1634
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ +VSPF KMS+ET FL DA L G D L +P+ RL VG++ GTG ++ ++
Sbjct: 1635 LTGNVSPFTKMSYETTVGFLKDAVLDGDWDSLDTPSGRLVVGKLGVTGTGSFDVFTKV 1692
[81][TOP]
>UniRef100_C9SE91 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SE91_9PEZI
Length = 1686
Score = 124 bits (311), Expect = 4e-27
Identities = 61/118 (51%), Positives = 83/118 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L YGVEA R+ I+ E+ +VF +GI VD RHL+LIAD+MT GGY NR G
Sbjct: 1559 TNDIAAVLDVYGVEACRSNIVLELGNVFGGHGISVDNRHLNLIADYMTRNGGYTPFNRNG 1618
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ +VSPF KMSFET FL DA L G DDL +P++RL +GR+ + GTG +++ ++
Sbjct: 1619 LRGNVSPFTKMSFETTLAFLKDAVLDGDWDDLTTPSSRLVMGRLGKTGTGAFDVLTKL 1676
[82][TOP]
>UniRef100_C6HCI4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HCI4_AJECH
Length = 1676
Score = 124 bits (311), Expect = 4e-27
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G
Sbjct: 1557 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1616
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G
Sbjct: 1617 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1676
[83][TOP]
>UniRef100_C4R1Z5 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R1Z5_PICPG
Length = 1640
Score = 124 bits (311), Expect = 4e-27
Identities = 62/118 (52%), Positives = 84/118 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND +A+L TYGVEAAR TI+ E+ +VF Y I V RHL LIAD MT QG Y A NR G
Sbjct: 1518 SNDTYAVLRTYGVEAARNTIVNEINNVFGRYAIAVSSRHLDLIADMMTRQGTYLAFNRQG 1577
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
IE+S S F+KMS+ET FLT A L ++L+SP+ARL VG++ ++GTG +++ ++
Sbjct: 1578 IENSTSSFMKMSYETTCQFLTKAVLDNDREELESPSARLVVGKLSKVGTGIFDVMARM 1635
[84][TOP]
>UniRef100_C0NL49 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NL49_AJECG
Length = 1697
Score = 124 bits (311), Expect = 4e-27
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G
Sbjct: 1578 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1637
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G
Sbjct: 1638 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1697
[85][TOP]
>UniRef100_B0CXW7 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CXW7_LACBS
Length = 1711
Score = 124 bits (311), Expect = 4e-27
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++A+L TYGVE ARA I+RE+ +F AY I VD RHL LIAD+MT GGY+ NR G
Sbjct: 1593 SNDIYAILKTYGVEMARAAILREMGGIFGAYNIQVDRRHLELIADYMTFDGGYKPFNRKG 1652
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I ++ SP LK S+ET FL+DATL G DDL +P+ + +GR GTG ++V I
Sbjct: 1653 ISTNPSPLLKASYETTGAFLSDATLYGDFDDLSTPSGNIVLGRPNCTGTGVFDVVMGI 1710
[86][TOP]
>UniRef100_A7TPJ8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TPJ8_VANPO
Length = 1656
Score = 124 bits (311), Expect = 4e-27
Identities = 62/119 (52%), Positives = 84/119 (70%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1534 TSNDVSAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1593
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+E+S S +KMS+ET FLT A L ++LKSP+AR+ +G++ +GTG +++ ++
Sbjct: 1594 GMETSTSSLMKMSYETTCQFLTKAVLDNENEELKSPSARIVLGKLNNVGTGAFDVLSKV 1652
[87][TOP]
>UniRef100_A6R8S3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R8S3_AJECN
Length = 1573
Score = 124 bits (311), Expect = 4e-27
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA I+RE+ +VF + I VD RHL+LI D MTH G +RA NR+G
Sbjct: 1454 TNSIADMLVMYGVEAARACIIREMAAVFDGHSISVDNRHLNLIGDVMTHAGSFRAFNRMG 1513
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ S SPF+KMSFET FL DA L D+L P++R+ +GRV +GTG +++ +G
Sbjct: 1514 LVKDSTSPFMKMSFETTVGFLRDAVLERDCDNLNGPSSRIVMGRVGTVGTGAFDVLAPVG 1573
[88][TOP]
>UniRef100_A9UY22 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UY22_MONBE
Length = 1592
Score = 124 bits (310), Expect = 5e-27
Identities = 62/117 (52%), Positives = 81/117 (69%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
NDV+AM TYGVEA + +I+RE+ +VF YGI V+ RHLSL+AD+M +G YR NRI +
Sbjct: 1467 NDVNAMFETYGVEAGQRSIIRELSAVFDVYGIAVNHRHLSLVADYMAFEGDYRGMNRISM 1526
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
SS PFLKMSFE+ FL +TLRG D L+S ++RL +G V GTG +VQ +
Sbjct: 1527 RSSTDPFLKMSFESTTDFLRASTLRGDHDTLQSNSSRLVLGAVTAGGTGVCSVVQPL 1583
[89][TOP]
>UniRef100_C8ZH93 Rpa190p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZH93_YEAST
Length = 1664
Score = 124 bits (310), Expect = 5e-27
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++
Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661
Query: 159 GLA 151
A
Sbjct: 1662 NAA 1664
[90][TOP]
>UniRef100_B6QC93 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QC93_PENMQ
Length = 1689
Score = 124 bits (310), Expect = 5e-27
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAAR+TI+RE+ VFS + I VD RHL+LI D MTH GG+++ +R G
Sbjct: 1570 TNSIHDMLIYYGVEAARSTIIREMSDVFSGHSITVDNRHLNLIGDVMTHSGGFKSYSRNG 1629
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
I S SPF K SFET+ F+ DA L DDLKSP++R+ VGR+ +GTG ++
Sbjct: 1630 LIRESNSPFSKSSFETSVGFMRDAVLERDFDDLKSPSSRIVVGRLGNVGTGAFDI 1684
[91][TOP]
>UniRef100_B3LK00 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LK00_YEAS1
Length = 1664
Score = 124 bits (310), Expect = 5e-27
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++
Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661
Query: 159 GLA 151
A
Sbjct: 1662 NAA 1664
[92][TOP]
>UniRef100_P10964 DNA-directed RNA polymerase I subunit RPA1 n=4 Tax=Saccharomyces
cerevisiae RepID=RPA1_YEAST
Length = 1664
Score = 124 bits (310), Expect = 5e-27
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1542 TSNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1601
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
G+E+S S F+KMS+ET FLT A L + L SP+AR+ VG++ +GTG +++ ++
Sbjct: 1602 GMETSTSSFMKMSYETTCQFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVP 1661
Query: 159 GLA 151
A
Sbjct: 1662 NAA 1664
[93][TOP]
>UniRef100_B0EDI6 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0EDI6_ENTDI
Length = 1568
Score = 123 bits (309), Expect = 7e-27
Identities = 56/118 (47%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV+A+L YGVEAAR ++ E+ SVF AYGI VDPRHL+L+AD+MT++G Y++ NR G
Sbjct: 1448 TNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEGEYKSLNRSG 1507
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ + SPF K++FET+ FL + G D+LKSP+ + +G+ + GTG ++ ++
Sbjct: 1508 MDHNPSPFTKITFETSLGFLAKTCVSGQKDNLKSPSGSVVMGKNMVFGTGAFDIYTEL 1565
[94][TOP]
>UniRef100_C4JYF5 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JYF5_UNCRE
Length = 1666
Score = 123 bits (309), Expect = 7e-27
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N +H ML YGVEAARA+I+RE+ SVF ++ I VD RHL+LI D MT GGYR NR+G
Sbjct: 1547 SNSIHHMLTFYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQSGGYRPFNRMG 1606
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
I + S SP KMSFET FL DA L D+L +P++R+ +GRV +GTG +++ +G
Sbjct: 1607 IVKDSTSPLTKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGTGSFDVLAPVG 1666
[95][TOP]
>UniRef100_C5FC46 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FC46_NANOT
Length = 1680
Score = 123 bits (308), Expect = 9e-27
Identities = 65/120 (54%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N V ML YGVEAARATI+ EV +VF +GI VD RHL+LIAD MT GGYR NR+G
Sbjct: 1561 SNSVSHMLGLYGVEAARATIVNEVGAVFDGHGIKVDNRHLTLIADVMTQTGGYRPFNRMG 1620
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
I + S SP +KMSFET FL DA L D+L P++R+ VGRV +GTG +++ +G
Sbjct: 1621 IVKDSTSPLMKMSFETTVRFLRDAVLERDWDNLNGPSSRIVVGRVGTVGTGAFDVLAPVG 1680
[96][TOP]
>UniRef100_C1GUK2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1GUK2_PARBA
Length = 1691
Score = 123 bits (308), Expect = 9e-27
Identities = 61/120 (50%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA+I+RE+ +VF+++ I VD RHL+LI D MTH GG+RA NR+G
Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFNSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G
Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691
[97][TOP]
>UniRef100_C7YZ78 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YZ78_NECH7
Length = 1674
Score = 122 bits (307), Expect = 1e-26
Identities = 59/118 (50%), Positives = 84/118 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L YGVEAAR+ I++E+ VF ++GI VD RHL+LI D MT GG+ NR+G
Sbjct: 1548 TNDIAAVLAVYGVEAARSNIVQELAGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMG 1607
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ +VSPF KMSFET FL DA L G DDL +P+ R +G++ ++GTG +++ Q+
Sbjct: 1608 LKGNVSPFTKMSFETTLSFLKDAVLDGDWDDLATPSGRSVMGKLGKVGTGGFDVLAQL 1665
[98][TOP]
>UniRef100_C1FYI4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1FYI4_PARBD
Length = 1691
Score = 122 bits (307), Expect = 1e-26
Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G
Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G
Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691
[99][TOP]
>UniRef100_C0S421 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0S421_PARBP
Length = 1691
Score = 122 bits (307), Expect = 1e-26
Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + MLV YGVEAARA+I+RE+ +VF ++ I VD RHL+LI D MTH GG+RA NR+G
Sbjct: 1572 TNSIADMLVWYGVEAARASIIREMATVFDSHSISVDNRHLNLIGDVMTHAGGFRAFNRMG 1631
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
++ + SP +KMSFET FL DA L D+L P+ R+ +GRV +GTG +++ +G
Sbjct: 1632 LVKDNTSPLMKMSFETTVGFLRDAVLERDWDNLNGPSGRIVMGRVGTVGTGAFDVLAPVG 1691
[100][TOP]
>UniRef100_UPI000179161A PREDICTED: similar to DNA-directed RNA polymerase I largest subunit
n=1 Tax=Acyrthosiphon pisum RepID=UPI000179161A
Length = 1606
Score = 122 bits (306), Expect = 1e-26
Identities = 57/116 (49%), Positives = 84/116 (72%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND+ ML TYG+EAA I++EV++VF YGI VD RHLSLIAD+MT+ G Y+A NR+G+
Sbjct: 1491 NDIQMMLNTYGIEAANRVIIKEVKNVFKVYGINVDTRHLSLIADYMTYDGKYKALNRVGM 1550
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
SP +MSFE+ ++L +T+RG D+L SP++ L +G+ ++G+G V+L+ Q
Sbjct: 1551 NGCPSPLQQMSFESTLNYLKKSTVRGLKDNLVSPSSTLIIGQQAQIGSGLVKLLWQ 1606
[101][TOP]
>UniRef100_UPI0000D56583 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit
n=1 Tax=Tribolium castaneum RepID=UPI0000D56583
Length = 1619
Score = 122 bits (306), Expect = 1e-26
Identities = 59/117 (50%), Positives = 83/117 (70%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND+H M TYG+EAA I++EVQ VF+ YGI VDPRHLSLIAD+MT G + +R G+
Sbjct: 1503 NDIHKMAETYGIEAAMKIIVKEVQDVFNVYGIKVDPRHLSLIADYMTFNGTFEPLSRKGM 1562
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
ESS SP +M+FE++ FL +AT+ G D+L +P++ L VG+ GTGC E++ ++
Sbjct: 1563 ESSASPLQQMTFESSLTFLRNATIGGKRDNLTNPSSCLMVGKPCVTGTGCFEVLHKM 1619
[102][TOP]
>UniRef100_C4M3E6 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M3E6_ENTHI
Length = 1570
Score = 122 bits (306), Expect = 1e-26
Identities = 55/118 (46%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV+A+L YGVEAAR ++ E+ SVF AYGI VDPRHL+L+AD+MT++G Y++ NR G
Sbjct: 1450 TNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEGEYKSLNRSG 1509
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ + SPF K++FET+ FL + G D+L+SP+ + +G+ + GTG ++ ++
Sbjct: 1510 MDHNPSPFTKITFETSLGFLAKTCVSGQKDNLRSPSGSVVMGKNMVFGTGAFDIYTEL 1567
[103][TOP]
>UniRef100_UPI0001867C20 hypothetical protein BRAFLDRAFT_129163 n=1 Tax=Branchiostoma floridae
RepID=UPI0001867C20
Length = 1546
Score = 121 bits (304), Expect = 2e-26
Identities = 57/97 (58%), Positives = 76/97 (78%)
Frame = -2
Query: 453 REVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLT 274
+E++ VF+ YGI VDPRHLSL+AD+MT++G Y+ NR GI+S+ SPF +MSFET+ FL
Sbjct: 1449 QEIKEVFAVYGIEVDPRHLSLVADYMTYEGVYKPFNRTGIQSNASPFQQMSFETSMQFLK 1508
Query: 273 DATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+AT+ G+ DDLKSP+ARL GR V GTGC EL+Q +
Sbjct: 1509 EATISGAKDDLKSPSARLVTGRPVMGGTGCFELLQPL 1545
[104][TOP]
>UniRef100_Q6CIX4 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CIX4_KLULA
Length = 1653
Score = 121 bits (304), Expect = 2e-26
Identities = 62/117 (52%), Positives = 82/117 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR G
Sbjct: 1534 SNDVAAVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGNYLAFNRQG 1593
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ESS S +KMS+ET FLT A L ++LKSP+A++ +G++ +GTG +L+ +
Sbjct: 1594 MESSTSSLMKMSYETTCQFLTKAVLDNEHEELKSPSAKIVMGKLNGVGTGSFDLLSK 1650
[105][TOP]
>UniRef100_C5DV78 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DV78_ZYGRC
Length = 1667
Score = 121 bits (303), Expect = 3e-26
Identities = 62/118 (52%), Positives = 83/118 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV A+L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR G
Sbjct: 1546 SNDVAAVLRTYGVEAARNTIVYEINNVFSRYAISVSFRHLDLIADLMTRQGNYLAFNRQG 1605
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E+S S F+KMS+ET FLT A L + L+SP+AR+ +G++ +GTG +++ +I
Sbjct: 1606 METSTSSFMKMSYETTCQFLTKAVLDNDREKLQSPSARIVLGKLNNVGTGAFDVLTKI 1663
[106][TOP]
>UniRef100_A1CP71 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CP71_ASPCL
Length = 1734
Score = 120 bits (302), Expect = 4e-26
Identities = 61/119 (51%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1615 TNSIHHMLTLYGVEAARASIVREMSDVFEGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1674
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S SP KMSFET FL DA + D+LKSP++R+ VGR +GTG +++ +
Sbjct: 1675 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVVGRAGMVGTGAFDVLAPV 1733
[107][TOP]
>UniRef100_B0XG16 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XG16_CULQU
Length = 1692
Score = 120 bits (301), Expect = 6e-26
Identities = 57/118 (48%), Positives = 87/118 (73%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++A+ TYG+EAA I++EVQ+VF YGI ++PRHL L+AD+MT G +++ +R G
Sbjct: 1573 SNDIYAVAQTYGIEAASRVIVKEVQNVFKVYGIEINPRHLLLVADYMTADGTFKSLSRKG 1632
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E++VSP ++SFE++ FL ATL+G+ D L SP++RL VG++ + GTG L QI
Sbjct: 1633 MEANVSPLQQISFESSIQFLKAATLKGNGDHLDSPSSRLMVGKLCKSGTGSFGLYNQI 1690
[108][TOP]
>UniRef100_A7ARZ5 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7ARZ5_BABBO
Length = 2016
Score = 120 bits (301), Expect = 6e-26
Identities = 61/117 (52%), Positives = 79/117 (67%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND+ + YG+EAARA+I+ E+Q+VFS YGI VD RHLSLIADFMT++G R NR G+
Sbjct: 1864 NDIATVYRYYGIEAARASIVSELQNVFSVYGINVDYRHLSLIADFMTNKGDIRTFNRYGM 1923
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
SP L+MSFE+ F+ DA RG DDL SPA + GR + LG G +++ QI
Sbjct: 1924 ARHASPLLQMSFESTLKFIMDACERGGYDDLGSPAGAIVAGRPIRLGGGLCKVLPQI 1980
[109][TOP]
>UniRef100_Q6FV16 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FV16_CANGA
Length = 1643
Score = 120 bits (301), Expect = 6e-26
Identities = 59/119 (49%), Positives = 83/119 (69%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ ++L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1523 TSNDIASVLQTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1582
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+E+S S +KMS+ET FLT A L + L+SP+AR+ +G++ +GTG +++ ++
Sbjct: 1583 GMETSTSSLMKMSYETTCQFLTKAVLDNEREQLESPSARIVLGKLNNVGTGAFDILSKV 1641
[110][TOP]
>UniRef100_C5DG15 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DG15_LACTC
Length = 1654
Score = 120 bits (301), Expect = 6e-26
Identities = 60/119 (50%), Positives = 83/119 (69%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV ++L TYGVEAAR TI+ E+ +VFS Y I V RHL LIAD MT QG Y A NR
Sbjct: 1532 TSNDVASVLKTYGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQ 1591
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+E+S S +KMS+ET FLT A L ++L SP+AR+ +G++ +GTG +++ ++
Sbjct: 1592 GMETSTSSLMKMSYETTCQFLTKAVLDNECENLDSPSARIVLGKLNNVGTGAFDVLAKV 1650
[111][TOP]
>UniRef100_UPI00015B5184 PREDICTED: similar to DNA-directed RNA polymerase I largest subunit
n=1 Tax=Nasonia vitripennis RepID=UPI00015B5184
Length = 1694
Score = 119 bits (298), Expect = 1e-25
Identities = 61/125 (48%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ + TYG+EAA I++EV+ VF YGI VD RHLSLIAD+MT +G ++ +R G
Sbjct: 1561 SNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDTRHLSLIADYMTFEGRFQPLSRKG 1620
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGC----VELVQ 169
+E S SP +MSFE++ +FL +ATL+G DDL SP++RL +G+ GTG V++ Q
Sbjct: 1621 MEDSASPLQQMSFESSLNFLKNATLQGKNDDLTSPSSRLMLGQPCNSGTGAFSLMVDIQQ 1680
Query: 168 QIGGL 154
QI L
Sbjct: 1681 QISQL 1685
[112][TOP]
>UniRef100_UPI00016E3D4E UPI00016E3D4E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E3D4E
Length = 1681
Score = 119 bits (297), Expect = 2e-25
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 1563 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1622
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q +
Sbjct: 1623 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1680
[113][TOP]
>UniRef100_UPI00016E3D4D UPI00016E3D4D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E3D4D
Length = 1691
Score = 119 bits (297), Expect = 2e-25
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 1573 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1632
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q +
Sbjct: 1633 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1690
[114][TOP]
>UniRef100_UPI00016E3D4C UPI00016E3D4C related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E3D4C
Length = 1713
Score = 119 bits (297), Expect = 2e-25
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VH M TYG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 1595 SNEVHTMATTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGIYKPLNRHA 1654
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+VV+ GTG EL Q +
Sbjct: 1655 ICSNSSPLQQMTFETSYRFIKQATMLGSHDRLVSPSASLVVGKVVKGGTGLFELKQPL 1712
[115][TOP]
>UniRef100_Q5CFH2 RNA polymerase A/beta'/A'' subunit n=1 Tax=Cryptosporidium hominis
RepID=Q5CFH2_CRYHO
Length = 472
Score = 119 bits (297), Expect = 2e-25
Identities = 60/110 (54%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG- 337
ND+ + YGVEAAR I+ E+++VFS YGI VD RHL+LI+D +T G R NR+G
Sbjct: 306 NDIQTVYKYYGVEAARHCIINELRNVFSVYGINVDYRHLTLISDSITASGKLRVFNRMGT 365
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
I ++SPFL+MSFET+ FLT+A LRG++D+LKSPA+ + VG++V +GTG
Sbjct: 366 ISYNISPFLQMSFETSMKFLTEACLRGALDNLKSPASSISVGKMVSVGTG 415
[116][TOP]
>UniRef100_Q6MYA4 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus
RepID=Q6MYA4_ASPFU
Length = 1692
Score = 119 bits (297), Expect = 2e-25
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1573 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1632
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ +
Sbjct: 1633 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1691
[117][TOP]
>UniRef100_Q4WS60 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus
RepID=Q4WS60_ASPFU
Length = 1680
Score = 119 bits (297), Expect = 2e-25
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1561 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1620
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ +
Sbjct: 1621 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1679
[118][TOP]
>UniRef100_Q4PB85 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PB85_USTMA
Length = 1795
Score = 119 bits (297), Expect = 2e-25
Identities = 61/114 (53%), Positives = 76/114 (66%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ A+L TYGVEAARA I+ E++ +F YGI V PRHL LIAD+ T GG+R NR G
Sbjct: 1670 TNDIGAVLHTYGVEAARAAIVAEMRGIFDTYGIAVSPRHLFLIADYQTAAGGFRPFNRSG 1729
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
I S S LK SFE F+ + L G VD LK+P+++L VGR V GTG E+
Sbjct: 1730 ISESSSTLLKASFEMTMAFIGGSALHGEVDMLKTPSSKLVVGRPVNSGTGTPEI 1783
[119][TOP]
>UniRef100_B0XRP3 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus A1163
RepID=B0XRP3_ASPFC
Length = 1680
Score = 119 bits (297), Expect = 2e-25
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1561 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1620
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ +
Sbjct: 1621 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1679
[120][TOP]
>UniRef100_A1D226 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D226_NEOFI
Length = 1681
Score = 119 bits (297), Expect = 2e-25
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML+ YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1562 TNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1621
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S SP KMSFET FL DA + D+LKSP++R+ GR +GTG +++ +
Sbjct: 1622 LVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV 1680
[121][TOP]
>UniRef100_B9QJU7 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
RepID=B9QJU7_TOXGO
Length = 2676
Score = 118 bits (295), Expect = 3e-25
Identities = 60/109 (55%), Positives = 79/109 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G
Sbjct: 2438 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2497
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190
+ +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+
Sbjct: 2498 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2546
[122][TOP]
>UniRef100_B9PNT4 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PNT4_TOXGO
Length = 2626
Score = 118 bits (295), Expect = 3e-25
Identities = 60/109 (55%), Positives = 79/109 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G
Sbjct: 2388 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2447
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190
+ +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+
Sbjct: 2448 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2496
[123][TOP]
>UniRef100_B6KG86 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KG86_TOXGO
Length = 2768
Score = 118 bits (295), Expect = 3e-25
Identities = 60/109 (55%), Positives = 79/109 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TNDV A+L YG+EAAR + RE++ VFSAYGI VD RHL+LIADFMTH G R NR+G
Sbjct: 2530 TNDVRAVLKYYGIEAARVCLARELERVFSAYGIKVDYRHLALIADFMTHGGTLRPFNRLG 2589
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGT 190
+ +S +PFL+MS+ET+ FLT+A R +VD L +P+ L VG +G+
Sbjct: 2590 MAASNAPFLQMSYETSFKFLTEACERAAVDSLSTPSGSLVVGAPSVIGS 2638
[124][TOP]
>UniRef100_UPI00017B5891 UPI00017B5891 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B5891
Length = 1708
Score = 117 bits (294), Expect = 4e-25
Identities = 59/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 1590 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 1649
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG++V+ GTG EL Q +
Sbjct: 1650 IRSNSSPLQQMTFETSYKFIKQATMLGSHDRLASPSASLVVGKLVKGGTGLFELKQPL 1707
[125][TOP]
>UniRef100_Q23DD6 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q23DD6_TETTH
Length = 1727
Score = 117 bits (294), Expect = 4e-25
Identities = 53/118 (44%), Positives = 83/118 (70%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ A+ YG+EAAR I++E+ +VF YG+ VD RHL LIAD++T G +A NR+
Sbjct: 1610 SNDIAALNKCYGIEAARNAIVKEIVTVFGVYGVVVDYRHLYLIADYLTFSGEMKAMNRVW 1669
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ S+SPFLKMSFET FLT+A +D L +P++ + +GRV ++GTG +++ ++
Sbjct: 1670 MDESISPFLKMSFETCVKFLTNAATNNEIDTLSTPSSSIVLGRVPQVGTGVFDILHKV 1727
[126][TOP]
>UniRef100_Q16K29 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16K29_AEDAE
Length = 1686
Score = 117 bits (294), Expect = 4e-25
Identities = 55/122 (45%), Positives = 87/122 (71%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++A+ TYG+EAA I++EVQ+VF YGI ++PRHL L+AD+MT G +++ +R G
Sbjct: 1565 SNDIYAIAQTYGIEAAARVIVKEVQNVFKVYGITINPRHLLLVADYMTADGTFKSMSRKG 1624
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
+ES+VSP ++SFE++ FL A L+G+ D L SP++RL VG++ + GTG + ++
Sbjct: 1625 MESNVSPLQQISFESSIQFLKAAALKGNGDHLDSPSSRLMVGQLCKSGTGAFSVYSKVQA 1684
Query: 156 LA 151
A
Sbjct: 1685 AA 1686
[127][TOP]
>UniRef100_Q0D0E1 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D0E1_ASPTN
Length = 1691
Score = 117 bits (293), Expect = 5e-25
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+RA NR G
Sbjct: 1572 TNSIHHMLQFYGVEAARASIVREMSDVFEGHSISVDNRHLNLIGDVMTQSGGFRAFNRNG 1631
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ SPF KMSFET FL +A + D+L+SP++R+ VGR +GTG +++ +
Sbjct: 1632 LVKDGTSPFAKMSFETTVGFLKEAVIERDFDNLRSPSSRIVVGRPGIVGTGAFDVLAPV 1690
[128][TOP]
>UniRef100_B4P775 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P775_DROYA
Length = 1642
Score = 117 bits (292), Expect = 6e-25
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKI 1641
[129][TOP]
>UniRef100_B4LLN1 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LLN1_DROVI
Length = 1648
Score = 117 bits (292), Expect = 6e-25
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1530 SNDIHAIARTYGIEAANQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1589
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL +A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1590 MEHSSSPLQQMSFESSLQFLRNAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTKI 1647
[130][TOP]
>UniRef100_P91875 DNA-directed RNA polymerase I subunit RPA1 n=1 Tax=Drosophila
melanogaster RepID=RPA1_DROME
Length = 1642
Score = 117 bits (292), Expect = 6e-25
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKI 1641
[131][TOP]
>UniRef100_UPI000180C7E3 PREDICTED: similar to RNA polymerase I large subunit n=1 Tax=Ciona
intestinalis RepID=UPI000180C7E3
Length = 1547
Score = 116 bits (291), Expect = 8e-25
Identities = 58/122 (47%), Positives = 83/122 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N VH++ YG+EAAR +++E+ +VF+ YGI VD RHL+LI D+M ++G Y+ NR+
Sbjct: 1426 SNCVHSVAQMYGIEAARRVVVKEIANVFAVYGIEVDQRHLNLIGDYMCYEGVYKPFNRMA 1485
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
IES VSP +MSFET FL A L G D L+SP+AR+ G+VV+ GTG L+ +
Sbjct: 1486 IESCVSPLQQMSFETTMKFLNSAALYGLQDRLQSPSARIVTGQVVKGGTGNFSLLCPVAK 1545
Query: 156 LA 151
+A
Sbjct: 1546 MA 1547
[132][TOP]
>UniRef100_Q291D4 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q291D4_DROPS
Length = 1647
Score = 116 bits (291), Expect = 8e-25
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1529 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1588
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G DDL SP++RL VG V GTG +L+ +I
Sbjct: 1589 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDDLNSPSSRLMVGLPVRNGTGAFDLLTKI 1646
[133][TOP]
>UniRef100_B4GAV6 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4GAV6_DROPE
Length = 1647
Score = 116 bits (291), Expect = 8e-25
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1529 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1588
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G DDL SP++RL VG V GTG +L+ +I
Sbjct: 1589 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDDLNSPSSRLMVGLPVRNGTGAFDLLTKI 1646
[134][TOP]
>UniRef100_B8N4P4 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8N4P4_ASPFN
Length = 1673
Score = 116 bits (291), Expect = 8e-25
Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML YGVEAARA+I+RE+ VF + I VD RHL+LI D MT GG+R NR G
Sbjct: 1554 TNSIHHMLNLYGVEAARASIVREMTEVFEGHSISVDNRHLNLIGDVMTQSGGFRPFNRNG 1613
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ + SP KMSFET FL DA D+LKSP++R+ VGRV +GTG +++ +
Sbjct: 1614 LVKDASSPLAKMSFETTVGFLRDAVQERDYDNLKSPSSRIVVGRVGTVGTGAFDVLAPV 1672
[135][TOP]
>UniRef100_B4QFV8 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4QFV8_DROSI
Length = 1642
Score = 116 bits (290), Expect = 1e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDELSSPSSRLMVGLPVRNGTGAFELLTKI 1641
[136][TOP]
>UniRef100_B4MRK4 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MRK4_DROWI
Length = 1649
Score = 116 bits (290), Expect = 1e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1531 SNDIHAIARTYGIEAAAQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1590
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1591 MEHSSSPLQQMSFESSLQFLRSAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTKI 1648
[137][TOP]
>UniRef100_B4KP10 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KP10_DROMO
Length = 1649
Score = 116 bits (290), Expect = 1e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1531 SNDIHAIARTYGIEAATQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1590
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1591 MEHSSSPLQQMSFESSLQFLRSAAGFGRPDELNSPSSRLMVGLPVRNGTGAFELLTRI 1648
[138][TOP]
>UniRef100_B4HRE8 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4HRE8_DROSE
Length = 1585
Score = 116 bits (290), Expect = 1e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1467 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1526
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1527 MEHSSSPLQQMSFESSLQFLKSAAGFGRSDELSSPSSRLMVGLPVRNGTGAFELLTKI 1584
[139][TOP]
>UniRef100_B3NR27 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NR27_DROER
Length = 1642
Score = 116 bits (290), Expect = 1e-24
Identities = 59/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1524 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1583
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ ++
Sbjct: 1584 MEHSSSPLQQMSFESSLQFLKSAAGFGRADELSSPSSRLMVGLPVRNGTGAFELLTKL 1641
[140][TOP]
>UniRef100_B3MEH6 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MEH6_DROAN
Length = 1643
Score = 116 bits (290), Expect = 1e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1525 SNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 1584
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL A G D+L SP++RL VG V GTG EL+ +I
Sbjct: 1585 MEHSSSPLQQMSFESSLQFLRSAAGFGRQDELNSPSSRLMVGLPVRNGTGAFELLTKI 1642
[141][TOP]
>UniRef100_UPI0000DB7146 PREDICTED: similar to RNA polymerase I subunit CG10122-PA n=1
Tax=Apis mellifera RepID=UPI0000DB7146
Length = 1665
Score = 115 bits (289), Expect = 1e-24
Identities = 56/118 (47%), Positives = 85/118 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++++ TYG+EAA I++EV+ VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 1538 SNDIYSISQTYGIEAANRVIIKEVRDVFKMYGITVDSRHLSLIADYMTFDGRFQPLSRKG 1597
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ +FL +A L+G D+L+SP++RL +G+ + GTG L+ +I
Sbjct: 1598 MEESASPLQQMSFESSLNFLKNAALQGKRDNLESPSSRLMLGQPCKSGTGICSLLVKI 1655
[142][TOP]
>UniRef100_B4J683 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4J683_DROGR
Length = 903
Score = 114 bits (286), Expect = 3e-24
Identities = 59/118 (50%), Positives = 80/118 (67%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I++EV +VF YGI VD RHLSLIAD+MT G ++ +R G
Sbjct: 785 SNDIHAIARTYGIEAAAQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDGTFQPLSRKG 844
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+E S SP +MSFE++ FL +A G D L SP++RL VG V GTG EL+ ++
Sbjct: 845 MEHSSSPLQQMSFESSLQFLRNAAGFGRPDQLNSPSSRLMVGLPVRNGTGAFELLTKM 902
[143][TOP]
>UniRef100_B8C4Z8 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8C4Z8_THAPS
Length = 1671
Score = 114 bits (284), Expect = 5e-24
Identities = 55/115 (47%), Positives = 76/115 (66%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ + YGVEAAR +I +++ VF+ YGI VDPRHLSLIADFMT+ G Y+ NRIG
Sbjct: 1554 SNDIWGIRCAYGVEAARMSIADQIRGVFAVYGISVDPRHLSLIADFMTYDGEYKPMNRIG 1613
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ S FL+MSFE+ + F+ DA L D + SP+A + +G + GTG E +
Sbjct: 1614 MADISSTFLQMSFESTSVFMVDAALHKRNDPMMSPSANIVMGHPIRHGTGAFECI 1668
[144][TOP]
>UniRef100_B6AA07 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AA07_9CRYT
Length = 1981
Score = 113 bits (283), Expect = 7e-24
Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ + YG+EAAR ++ E+ +VF+ YGI VD RHLSLI D +T G R +R+G
Sbjct: 1837 SNDIQTVYKYYGIEAARKCLINELTNVFAVYGINVDYRHLSLIGDTVTFSGSIRVFSRVG 1896
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
+ S SPFL+MSFET+ FL DA RG++D LKSPA+ + VG++ +GTG
Sbjct: 1897 NVAHSTSPFLQMSFETSIKFLADACSRGAIDSLKSPASSISVGKICSVGTG 1947
[145][TOP]
>UniRef100_A2QRS4 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QRS4_ASPNC
Length = 1680
Score = 113 bits (283), Expect = 7e-24
Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML YGVEAARA+I++E+ VF + I VD RHL+LI D MT GG+R NR G
Sbjct: 1561 TNSIHDMLNLYGVEAARASIVKEMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRPFNRNG 1620
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ SP KMSFET +L +A + D+LKSP+AR+ VGR +GTG +++ +
Sbjct: 1621 LVKDGSSPLAKMSFETTVGYLKEAVVERDFDNLKSPSARIVVGRTGTVGTGAFDVLAPV 1679
[146][TOP]
>UniRef100_Q4UI00 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UI00_THEAN
Length = 1999
Score = 112 bits (281), Expect = 1e-23
Identities = 58/117 (49%), Positives = 76/117 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
NDV + YG+EAAR+ I+ E+Q VFS YGI VD RHL+LIADFMT +G R R G+
Sbjct: 1864 NDVATVFKYYGIEAARSCIVSELQKVFSVYGIKVDYRHLTLIADFMTQKGDVRTFTRYGM 1923
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
SP L+MSFE+ FL DA+ RG+ D+LKSPA L G+ V +G+ L+ +
Sbjct: 1924 ARHTSPLLQMSFESTMKFLMDASERGAYDNLKSPAGGLMTGKPVHVGSSLCRLMHVV 1980
[147][TOP]
>UniRef100_UPI000187F52A hypothetical protein MPER_15635 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187F52A
Length = 108
Score = 111 bits (278), Expect = 3e-23
Identities = 54/103 (52%), Positives = 71/103 (68%)
Frame = -2
Query: 471 ARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFET 292
ARA I+RE+ VF AYGI VD RHL LIAD+MT +GGY+ NR GI ++ SP LK S+ET
Sbjct: 2 ARAAILREMSGVFGAYGIQVDRRHLELIADYMTFEGGYKPFNRKGISANPSPLLKASYET 61
Query: 291 AAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
A FL+DATL G DDL +P+ + +GR GTG +++ +
Sbjct: 62 TAAFLSDATLHGDFDDLSTPSGNIVLGRPNHTGTGAFDVLMPL 104
[148][TOP]
>UniRef100_Q4N7L1 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N7L1_THEPA
Length = 1996
Score = 110 bits (276), Expect = 4e-23
Identities = 57/117 (48%), Positives = 76/117 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
NDV +L YG+EAAR+ I+ E+Q VFS YGI V+ RHL+LIADFMT +G R R G+
Sbjct: 1861 NDVATVLKYYGIEAARSCIVSELQKVFSVYGIKVNYRHLTLIADFMTQKGDVRTFTRYGM 1920
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
SP L+MSFE+ FL A+ RG+ D+LKSPA L G+ V +G+ L+ +
Sbjct: 1921 AKHTSPLLQMSFESTMKFLMQASQRGAYDNLKSPAGGLMAGKPVHVGSSLCRLMHVV 1977
[149][TOP]
>UniRef100_UPI0000E46841 PREDICTED: similar to RNA polymerase I large subunit n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E46841
Length = 1742
Score = 110 bits (275), Expect = 6e-23
Identities = 53/87 (60%), Positives = 69/87 (79%)
Frame = -2
Query: 450 EVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTD 271
EV+ VFS YGI VDPRHLSL++D+MT +G YR NRIG+ES+ SP KM+FE+ FL +
Sbjct: 1656 EVRDVFSVYGITVDPRHLSLVSDYMTFEGVYRPFNRIGLESNASPIQKMTFESCMRFLRE 1715
Query: 270 ATLRGSVDDLKSPAARLCVGRVVELGT 190
AT++G+ D+L+SP+ARL VGRVV GT
Sbjct: 1716 ATIQGAKDNLQSPSARLVVGRVVNGGT 1742
[150][TOP]
>UniRef100_C4Q0S7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q0S7_SCHMA
Length = 1784
Score = 109 bits (272), Expect = 1e-22
Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ M TYG+EAARA + REV VF YGI V+ RHLSLI+D++T G Y A NR
Sbjct: 1664 TNNITVMNETYGIEAARAALQREVSGVFGHYGIHVNSRHLSLISDYLTKFGVYHAFNRRS 1723
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE-LGTGCVELVQQI 163
+ S SP +M+FET A+ L + S+D+L SP+A L GR+V GT C EL+Q++
Sbjct: 1724 MSSHPSPIQQMTFETVANVLKHSLQNDSMDNLVSPSASLVAGRIVHYAGTNCFELLQKL 1782
[151][TOP]
>UniRef100_A2FYC2 DNA-directed RNA polymerase I 190 kDa polypeptide-related protein
n=1 Tax=Trichomonas vaginalis G3 RepID=A2FYC2_TRIVA
Length = 370
Score = 108 bits (270), Expect = 2e-22
Identities = 54/115 (46%), Positives = 76/115 (66%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YG+EAAR I++EV SVF Y I VD RHLSLIADF+T+ G + +R
Sbjct: 252 TNDIAIILKHYGIEAARMAIIKEVNSVFKNYMIDVDMRHLSLIADFVTNSGDWLGMSRHT 311
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
++ SP +MSFET FLT T+ G D ++SP+A L G V+++G+G E++
Sbjct: 312 MKKCASPLQQMSFETTTAFLTQCTMHGGKDMMESPSASLTAGNVIKMGSGLCEIL 366
[152][TOP]
>UniRef100_A2DXG9 DNA-directed RNA polymerase I 190 kDa polypeptide-related protein
n=1 Tax=Trichomonas vaginalis G3 RepID=A2DXG9_TRIVA
Length = 257
Score = 108 bits (269), Expect = 3e-22
Identities = 54/115 (46%), Positives = 76/115 (66%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ +L YG+EAAR I++EV SVF Y I VD RHLSLIADF+T+ G + +R
Sbjct: 139 TNDIAIILKHYGIEAARMAIIKEVNSVFKNYMIDVDMRHLSLIADFVTNTGDWLGMSRHT 198
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
++ SP +MSFET FLT T+ G D ++SP+A L G V+++G+G E++
Sbjct: 199 MKKCASPLQQMSFETTTAFLTQCTMHGGKDMMESPSASLTAGNVIKMGSGLCEIL 253
[153][TOP]
>UniRef100_UPI000186D8C3 DNA-directed RNA polymerase I largest subunit, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D8C3
Length = 1659
Score = 107 bits (268), Expect = 4e-22
Identities = 52/115 (45%), Positives = 75/115 (65%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV+ ++ T G+EA I++E+ VF YGI VD RHL L+AD+MT+QG Y NRIG
Sbjct: 1540 SNDVNKVVETLGIEAGVRIIVKELNDVFGVYGITVDHRHLLLVADYMTNQGNYSPFNRIG 1599
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ S SP +MSFE + FL + +R D + SP+AR+ GR + GTGC +++
Sbjct: 1600 LADSSSPLQQMSFERSTGFLKKSLVRNQEDFMNSPSARIMAGRFCKSGTGCFDVM 1654
[154][TOP]
>UniRef100_Q4SFA8 DNA-directed RNA polymerase n=1 Tax=Tetraodon nigroviridis
RepID=Q4SFA8_TETNG
Length = 1949
Score = 107 bits (266), Expect = 6e-22
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 1558 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 1617
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVV 202
I S+ SP +M+FET+ F+ AT+ GS D L SP+A L VG+++
Sbjct: 1618 IRSNSSPLQQMTFETSYKFIKQATMLGSHDRLASPSASLVVGKLL 1662
[155][TOP]
>UniRef100_B6HAC6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HAC6_PENCW
Length = 1671
Score = 106 bits (265), Expect = 8e-22
Identities = 55/119 (46%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H ML YGVEAAR TI+RE+ +VF + I VD RHL+LI D MT G ++A +R G
Sbjct: 1552 TNSIHDMLNLYGVEAARGTIVREMDAVFKGHSISVDNRHLNLIGDVMTQSGSFKAFSRNG 1611
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ + S F + SFET L D L D+LKSP++R+ VGRV +GTG +++ +
Sbjct: 1612 LVKDASSAFARASFETTVGALKDVVLERGNDNLKSPSSRIVVGRVGTVGTGSFDILAPV 1670
[156][TOP]
>UniRef100_A8QBY2 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8QBY2_MALGO
Length = 1673
Score = 106 bits (264), Expect = 1e-21
Identities = 54/110 (49%), Positives = 73/110 (66%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ A+L YGVEAARA I+ E++ +F YGIGV RH+ LIAD+ T G +R +R G
Sbjct: 1552 SNDIGALLYCYGVEAARAAIVSELKGIFDTYGIGVSMRHMFLIADYQTAFGDFRPFSRGG 1611
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
+ + SP LK SFE FL+ A+L +DDL SP++ + VGR V GTG
Sbjct: 1612 LADAPSPLLKASFEMTMAFLSGASLFQEMDDLTSPSSNIVVGRPVRSGTG 1661
[157][TOP]
>UniRef100_Q4YXG8 DNA-directed RNA polymerase n=1 Tax=Plasmodium berghei
RepID=Q4YXG8_PLABE
Length = 2577
Score = 105 bits (262), Expect = 2e-21
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ NR GI
Sbjct: 2457 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFNRYGI 2516
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
+ + F KMSFE A F+ ++ S+D L +P++ L G+ +++GT +V I G
Sbjct: 2517 NAYRNVFHKMSFECATSFMIQGCIQNSIDYLSTPSSSLFFGKHIKVGTNVSNIVTCIKG 2575
[158][TOP]
>UniRef100_A0DJB3 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0DJB3_PARTE
Length = 1696
Score = 105 bits (262), Expect = 2e-21
Identities = 51/116 (43%), Positives = 80/116 (68%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND+ A++ +G+EAAR I++E+ +VF AYG+ VD RHL LIAD+MT G RA NRI +
Sbjct: 1576 NDIVAIMNAFGIEAARNAIIKEILAVFGAYGVAVDYRHLYLIADYMTFGGQIRAMNRIYM 1635
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + +PF KM+FET+ FLT+A L D + +++L +GRV ++G+ +++ Q
Sbjct: 1636 DFNTAPFGKMTFETSTQFLTNACLNRETDTFNNLSSQLVIGRVPKVGSNLCDVLYQ 1691
[159][TOP]
>UniRef100_Q7RJK4 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJK4_PLAYO
Length = 2594
Score = 103 bits (258), Expect = 5e-21
Identities = 50/117 (42%), Positives = 76/117 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ NR G+
Sbjct: 2474 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFNRYGM 2533
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ + F KMSFE A F+ ++ SVD L +P++ L G+ +++GT +V I
Sbjct: 2534 AACRNVFHKMSFECATTFMIQGCIQNSVDYLSTPSSSLFFGKHIKVGTNVSNIVTSI 2590
[160][TOP]
>UniRef100_B3L6H5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L6H5_PLAKH
Length = 2592
Score = 103 bits (258), Expect = 5e-21
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ +R G+
Sbjct: 2472 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFSRHGL 2531
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
+ F KMSFE A +FLT + SVD L + ++ L G+ +++GT ++V I G
Sbjct: 2532 GCFRNVFHKMSFECATNFLTQGCVHNSVDYLSTASSSLFFGKPIKVGTNVADIVTHIEG 2590
[161][TOP]
>UniRef100_A5KB21 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5KB21_PLAVI
Length = 2695
Score = 103 bits (258), Expect = 5e-21
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++ ++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G ++ +R G+
Sbjct: 2575 NDIYTIVKTYGIEAGRLCITKELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSFSRHGL 2634
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIGG 157
+ F KMSFE A +FLT + SVD L + ++ L G+ +++GT ++V I G
Sbjct: 2635 GCFRNVFHKMSFECATNFLTQGCVHNSVDYLSTASSSLFFGKPIKVGTNVADIVTHIEG 2693
[162][TOP]
>UniRef100_Q8I410 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=Q8I410_PLAF7
Length = 2914
Score = 102 bits (255), Expect = 1e-20
Identities = 50/114 (43%), Positives = 75/114 (65%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++A++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G +A NR G+
Sbjct: 2793 NDIYAIVKTYGIEAGRLCITKELKKVFDAYGIQIDFRHLSFISDFMTHTGDLKAFNRHGL 2852
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ F KMSFE A +FL + S+D L + ++ L G+ +++GT ++V
Sbjct: 2853 GYFRNVFHKMSFECATNFLIQGCIHNSIDYLSTASSSLFFGKHIKVGTNLADIV 2906
[163][TOP]
>UniRef100_Q26008 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum
RepID=Q26008_PLAFA
Length = 2910
Score = 102 bits (255), Expect = 1e-20
Identities = 50/114 (43%), Positives = 75/114 (65%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
ND++A++ TYG+EA R I +E++ VF AYGI +D RHLS I+DFMTH G +A NR G+
Sbjct: 2792 NDIYAIVKTYGIEAGRLCITKELKKVFDAYGIQIDFRHLSFISDFMTHTGDLKAFNRHGL 2851
Query: 333 ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ F KMSFE A +FL + S+D L + ++ L G+ +++GT ++V
Sbjct: 2852 GYFRNVFHKMSFECATNFLIQGCIHNSIDYLSTASSSLFFGKHIKVGTNLADIV 2905
[164][TOP]
>UniRef100_UPI0000220D7C Hypothetical protein CBG20734 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000220D7C
Length = 1723
Score = 100 bits (250), Expect = 5e-20
Identities = 52/115 (45%), Positives = 73/115 (63%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR
Sbjct: 1584 SNDLNLILENYGVEACAKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1643
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ SS SP KM+FET FL +A L+G D++ SP+AR+ +G + GTG +L+
Sbjct: 1644 MSSSSSPLQKMTFETTMAFLREALLQGEEDNVNSPSARIVMGALPRGGTGSFDLI 1698
[165][TOP]
>UniRef100_A8XYH3 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XYH3_CAEBR
Length = 1764
Score = 100 bits (250), Expect = 5e-20
Identities = 52/115 (45%), Positives = 73/115 (63%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR
Sbjct: 1625 SNDLNLILENYGVEACAKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1684
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ SS SP KM+FET FL +A L+G D++ SP+AR+ +G + GTG +L+
Sbjct: 1685 MSSSSSPLQKMTFETTMAFLREALLQGEEDNVNSPSARIVMGALPRGGTGSFDLI 1739
[166][TOP]
>UniRef100_O17628 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=O17628_CAEEL
Length = 1737
Score = 100 bits (249), Expect = 6e-20
Identities = 53/115 (46%), Positives = 72/115 (62%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ +L YGVEA I E+ +VF+ YGI V RHLSL AD+MT G + NR
Sbjct: 1597 SNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGA 1656
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ SS SP KM+FET FL +A L G D++ SP+ARL +G + GTG +L+
Sbjct: 1657 MSSSSSPLQKMTFETTMAFLREALLHGEEDNVNSPSARLVMGALPRGGTGSFDLL 1711
[167][TOP]
>UniRef100_B7Z284 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z284_HUMAN
Length = 1207
Score = 100 bits (249), Expect = 6e-20
Identities = 46/87 (52%), Positives = 63/87 (72%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+HA+ TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1107 SNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1166
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256
I S+ SP +M+FET+ FL AT+ G
Sbjct: 1167 IRSNSSPLQQMTFETSFQFLKQATMLG 1193
[168][TOP]
>UniRef100_Q8SS15 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SS15_ENCCU
Length = 1395
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ + +T GVEAAR I+ EV VF YGI +D RHL LIAD+MT +G Y +R G
Sbjct: 1272 SNDIYDVYLTLGVEAARHAIINEVVKVFDVYGISIDIRHLLLIADYMTRKGSYSPFSRHG 1331
Query: 336 IESSVSPFLKMSFETA-AHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ + SP ++SFE+ ++F T AT D L +P+A L VG V GTGC +L+ I
Sbjct: 1332 LGADDSPIQRISFESCYSNFKTAATFH-LEDKLSNPSASLTVGNPVRCGTGCFDLIHNI 1389
[169][TOP]
>UniRef100_C6LRR9 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
RepID=C6LRR9_GIALA
Length = 2144
Score = 94.0 bits (232), Expect = 6e-18
Identities = 49/118 (41%), Positives = 69/118 (58%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN+++ + YG+EAAR++I+ E+ VFS Y I VD RHLSLIAD MT G R NR+
Sbjct: 2027 TNNINQIFEIYGIEAARSSIIEEIHRVFSTYHIEVDERHLSLIADSMTLSGCVRGLNRLE 2086
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ LK SFE+A + L D L++PA + VG+ GTG +L+ Q+
Sbjct: 2087 MRHQTEEILKASFESACTSIAAGALTSGFDSLRAPAGAVTVGQYPFQGTGSFDLLSQL 2144
[170][TOP]
>UniRef100_A8B7R7 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
RepID=A8B7R7_GIALA
Length = 2142
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/118 (42%), Positives = 66/118 (55%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + YG+EAAR I+ E+ VFS Y I VD RHLSLIAD MT G R NR+
Sbjct: 2025 TNNISQIFEIYGIEAARNAIIEEIHRVFSTYHIEVDERHLSLIADSMTLSGCVRGLNRLE 2084
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ LK SFE+A L L D L++PA + VG+ GTG +L+ Q+
Sbjct: 2085 MRHQTEELLKASFESACTSLAAGALTSGFDSLRAPAGAVTVGQYPSQGTGSFDLLTQL 2142
[171][TOP]
>UniRef100_Q2GP10 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GP10_CHAGB
Length = 1475
Score = 92.4 bits (228), Expect = 2e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TND+ +L YGVEA R+ I+ E+ VF+ +GI VDPRHL+LIAD+MT GG+ A NRI
Sbjct: 1388 STNDIAQVLEVYGVEACRSNIVAELSGVFAGHGIAVDPRHLNLIADYMTRNGGFSAFNRI 1447
Query: 339 GIESSVSPFLKMSF 298
G+ +VSPF KMS+
Sbjct: 1448 GLTGNVSPFTKMSY 1461
[172][TOP]
>UniRef100_UPI00017B50E6 UPI00017B50E6 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B50E6
Length = 192
Score = 91.7 bits (226), Expect = 3e-17
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 103 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 162
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256
I S+ SP +M+FET+ F+ AT+ G
Sbjct: 163 IRSNSSPLQQMTFETSYKFIKQATMLG 189
[173][TOP]
>UniRef100_Q4TEZ8 Chromosome undetermined SCAF4966, whole genome shotgun sequence.
(Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4TEZ8_TETNG
Length = 163
Score = 91.7 bits (226), Expect = 3e-17
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N+VHAM YG+E A I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR
Sbjct: 76 SNEVHAMANKYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHA 135
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRG 256
I S+ SP +M+FET+ F+ AT+ G
Sbjct: 136 IRSNSSPLQQMTFETSYKFIKQATMLG 162
[174][TOP]
>UniRef100_A8Q5K0 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8Q5K0_BRUMA
Length = 1687
Score = 91.3 bits (225), Expect = 4e-17
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND++ M YG+EA +++E+ VF+ YGI V+ RHL+L AD+MT G + +R
Sbjct: 1560 SNDLNMMCNNYGIEACGRALVKEIIRVFTPYGIDVNWRHLTLAADYMTFTGRIQPFSRGA 1619
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ S SP +M+FET F+ DA + G D L SP++RL +G ++ GTG +++
Sbjct: 1620 MSLSASPLQRMTFETTIAFMRDALINGDDDHLMSPSSRLVIGGLLRGGTGIFDVM 1674
[175][TOP]
>UniRef100_A9BKN5 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BKN5_9CRYP
Length = 1496
Score = 90.5 bits (223), Expect = 6e-17
Identities = 42/117 (35%), Positives = 76/117 (64%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND++A++ YG+EAAR T++RE+ ++F I ++ HL LI+D++T G +R +R G
Sbjct: 1380 TNDIYALMNRYGIEAARETLVRELNTIFQIQSILINYHHLDLISDYITRLGNFRPFSRKG 1439
Query: 336 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
I SP K+++ETA FL + +L +D L S + + +G++ ++GTG +++ +
Sbjct: 1440 I-CEESPLQKITYETALEFLINFSLNKQIDFLDSASGSISLGKICKMGTGTFDIISR 1495
[176][TOP]
>UniRef100_B7XHV6 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=B7XHV6_ENTBH
Length = 1270
Score = 90.5 bits (223), Expect = 6e-17
Identities = 46/119 (38%), Positives = 69/119 (57%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND++A+ + G+EA R TI+ E+++VF YGI + HL LIAD+M H G Y+ NR
Sbjct: 1150 TSNDIYAIFLHLGIEACRITIINEIKAVFDIYGIIISEEHLELIADYMCHNGTYQPFNRY 1209
Query: 339 GIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ S KMSFE+ + +A D + P+A + VG ++ GTG EL+ I
Sbjct: 1210 TFNMNDSIIQKMSFESCFKNIKEAVTFQLKDKISVPSANITVGNKIQNGTGLFELLYNI 1268
[177][TOP]
>UniRef100_Q976A6 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus tokodaii
RepID=RPOA2_SULTO
Length = 392
Score = 90.1 bits (222), Expect = 8e-17
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++H + T+G+EAAR I RE++ V G+ VD RH+ L+AD MT G R R G
Sbjct: 271 TNNIHEIADTFGIEAAREAIAREIKKVLEEQGLDVDMRHILLVADIMTRTGVVRQIGRHG 330
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ S L + +FE L DA RG +++ K + +G+ + LGTG VEL ++
Sbjct: 331 VTGEKSSVLARAAFEVTVKHLLDAAARGEMEEFKGVVENIIIGQPIRLGTGIVELTMRL 389
[178][TOP]
>UniRef100_UPI00003C8496 DNA-directed RNA polymerase subunit A'''''''' n=1 Tax=Ferroplasma
acidarmanus fer1 RepID=UPI00003C8496
Length = 504
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+ + +G+EAAR I RE ++ S G+ VD RHL L+AD MT G RA R
Sbjct: 382 TTNDIIEIENVFGIEAARNAIYREAENTLSEQGLNVDKRHLMLVADMMTFSGAVRAVGRQ 441
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI S L + +FE + L A L G +D L A + VG+ + LGTG ++LV
Sbjct: 442 GISGRKSSVLARAAFEITSKHLLKAGLLGEIDPLAGVAENIIVGQPITLGTGAIDLV 498
[179][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 87.0 bits (214), Expect = 7e-16
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+NDV+ +L G+EA R +MRE++ V G V+ RHL+++ D MTH+GG A R
Sbjct: 1313 TSNDVNEILDVLGIEACRNALMREMRKVIEFDGSYVNYRHLAILCDVMTHRGGLMAITRR 1372
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI S P ++ SFE L +A D LK +A + VG++ +GTGC L
Sbjct: 1373 GINRSDTGPLMRCSFEETVEILIEAATFADTDTLKGVSANVMVGQLAPIGTGCFGL 1428
[180][TOP]
>UniRef100_Q3SE61 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=Q3SE61_PARTE
Length = 1751
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TT+DV+ + G+EAARA ++ E + +F+ YGI ++ RHL L+ D+MTH+G A NR
Sbjct: 1413 TTDDVYEISQVLGIEAARAALVGETRKIFNHYGIYINYRHLYLLYDWMTHRGRLTAVNRN 1472
Query: 339 GIE--SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI VS K SFE L DA + +D ++ + + G++ GTGC EL+
Sbjct: 1473 GINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530
[181][TOP]
>UniRef100_A0BYP5 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0BYP5_PARTE
Length = 1750
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TT+DV+ + G+EAARA ++ E + +F+ YGI ++ RHL L+ D+MTH+G A NR
Sbjct: 1413 TTDDVYEISQVLGIEAARAALVGETRKIFNHYGIYINYRHLYLLYDWMTHRGRLTAVNRN 1472
Query: 339 GIE--SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI VS K SFE L DA + +D ++ + + G++ GTGC EL+
Sbjct: 1473 GINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530
[182][TOP]
>UniRef100_O28390 DNA-directed RNA polymerase subunit A'' n=1 Tax=Archaeoglobus
fulgidus RepID=RPOA2_ARCFU
Length = 380
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN+++ + G+EAAR I+RE G+ VD RH+ L+AD MT G R R
Sbjct: 257 TTNNIYEIYEVLGIEAARNAIIREALDTLEEQGLEVDVRHIMLVADVMTADGELRQIGRH 316
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ L + +FE + L DA +RG D L+ + VG+ ++LGTG VELV ++
Sbjct: 317 GVAGEKQSILARAAFEMTVNNLLDAAVRGEEDHLRGITENIIVGQPIKLGTGDVELVLKM 376
Query: 162 GG 157
GG
Sbjct: 377 GG 378
[183][TOP]
>UniRef100_UPI0000E46840 PREDICTED: similar to RNA polymerase I large subunit n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E46840
Length = 73
Score = 85.5 bits (210), Expect = 2e-15
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = -2
Query: 378 MTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE 199
MT +G YR NRIG+ES+ SP KM+FE+ FL +AT++G+ D+L+SP+ARL VGRVV
Sbjct: 1 MTFEGVYRPFNRIGLESNASPIQKMTFESCMRFLREATIQGAKDNLQSPSARLVVGRVVN 60
Query: 198 LGTGCVELVQQI 163
GTGC +L+Q +
Sbjct: 61 GGTGCFDLIQPL 72
[184][TOP]
>UniRef100_A5ULN5 DNA-dependent RNA polymerase, subunit A, RpoA n=1
Tax=Methanobrevibacter smithii ATCC 35061
RepID=A5ULN5_METS3
Length = 403
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+H + G+EAAR +I+ E ++ G+ VD RH+ L+AD MT +G ++ R
Sbjct: 281 TTNDIHEIETVLGIEAARQSIINEARNTLENQGLSVDVRHIMLVADIMTSEGEVKSIGRH 340
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCV 181
GI S L + +FE L A++RG VDDL + +G+ + LGTG +
Sbjct: 341 GISGEKSSVLARAAFEETGKHLLRASIRGEVDDLTGIIENIIIGQPIPLGTGSI 394
[185][TOP]
>UniRef100_B9AEP5 Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii
DSM 2375 RepID=B9AEP5_METSM
Length = 403
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+H + G+EAAR +I+ E ++ G+ VD RH+ L+AD MT +G ++ R
Sbjct: 281 TTNDIHEIETVLGIEAARQSIINEARNTLENQGLSVDVRHIMLVADIMTSEGEVKSIGRH 340
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCV 181
GI S L + +FE L A++RG VDDL + +G+ + LGTG +
Sbjct: 341 GISGEKSSVLARAAFEETGKHLLRASIRGEVDDLTGIIENIIIGQPIPLGTGSI 394
[186][TOP]
>UniRef100_UPI0001A48A43 DNA-DIRECTED RNA POLYMERASE RPO1C SUBUNIT n=1 Tax=Sulfolobus
shibatae RepID=UPI0001A48A43
Length = 395
Score = 84.0 bits (206), Expect = 6e-15
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G
Sbjct: 274 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 333
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + L + +FE L DA RG V++ K + +G ++LGTG VEL +
Sbjct: 334 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 391
[187][TOP]
>UniRef100_UPI0000164E43 DNA-directed RNA polymerase subunit A'''''''' n=1 Tax=Thermoplasma
volcanium GSS1 RepID=UPI0000164E43
Length = 513
Score = 84.0 bits (206), Expect = 6e-15
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ + G+EAAR I+ E Q G+ VD RHL L+AD MT G RA R G
Sbjct: 389 TNDIVEIATVLGIEAARNAILNEAQRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 448
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I S L + +FE L A + G VD L A + VG+ + LGTG V+++
Sbjct: 449 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 504
[188][TOP]
>UniRef100_Q5FC19 Protein Y48E1A.1b, confirmed by transcript evidence n=1
Tax=Caenorhabditis elegans RepID=Q5FC19_CAEEL
Length = 120
Score = 84.0 bits (206), Expect = 6e-15
Identities = 44/93 (47%), Positives = 59/93 (63%)
Frame = -2
Query: 450 EVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGIESSVSPFLKMSFETAAHFLTD 271
E+ +VF+ YGI V RHLSL AD+MT G + NR + SS SP KM+FET FL +
Sbjct: 2 EMNNVFAVYGIEVSKRHLSLTADYMTFTGQIQPFNRGAMSSSSSPLQKMTFETTMAFLRE 61
Query: 270 ATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
A L G D++ SP+ARL +G + GTG +L+
Sbjct: 62 ALLHGEEDNVNSPSARLVMGALPRGGTGSFDLL 94
[189][TOP]
>UniRef100_B8YB54 RNA polymerase subunit 1C n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB54_SULSH
Length = 395
Score = 84.0 bits (206), Expect = 6e-15
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G
Sbjct: 274 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 333
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + L + +FE L DA RG V++ K + +G ++LGTG VEL +
Sbjct: 334 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 391
[190][TOP]
>UniRef100_Q979F5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermoplasma
volcanium RepID=RPOA2_THEVO
Length = 508
Score = 84.0 bits (206), Expect = 6e-15
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ + G+EAAR I+ E Q G+ VD RHL L+AD MT G RA R G
Sbjct: 384 TNDIVEIATVLGIEAARNAILNEAQRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 443
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I S L + +FE L A + G VD L A + VG+ + LGTG V+++
Sbjct: 444 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 499
[191][TOP]
>UniRef100_C3MZM9 DNA-directed RNA polymerase subunit A'' n=6 Tax=Sulfolobus
islandicus RepID=RPOA2_SULIA
Length = 392
Score = 84.0 bits (206), Expect = 6e-15
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + +G+EAAR I+RE+ V + G+ VD RH+ L+AD MT G R R G
Sbjct: 271 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDMRHILLVADVMTRTGVVRQIGRHG 330
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + L + +FE L DA RG V++ K + +G ++LGTG VEL +
Sbjct: 331 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 388
[192][TOP]
>UniRef100_P58192 DNA-directed RNA polymerase subunit A'' n=2 Tax=Sulfolobus
solfataricus RepID=RPOA2_SULSO
Length = 392
Score = 83.6 bits (205), Expect = 8e-15
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + +G+EAAR I+RE+ V + G+ VD RH+ LIAD MT G R R G
Sbjct: 271 TNNIREIEEVFGIEAAREIIIREISKVLAEQGLDVDIRHILLIADVMTRTGIVRQIGRHG 330
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + L + +FE L DA RG V++ K + +G ++LGTG VEL +
Sbjct: 331 VTGEKNSVLARAAFEVTVKHLLDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMR 388
[193][TOP]
>UniRef100_A4YCR0 DNA-directed RNA polymerase subunit A'' n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=RPOA2_METS5
Length = 392
Score = 83.6 bits (205), Expect = 8e-15
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++H + GVEAAR I RE++ V G+ VD RH+ L++D MT G R R G
Sbjct: 271 TNNLHEVESVLGVEAARELITREIKRVLEEQGLDVDIRHIELVSDIMTRTGEVRQIGRHG 330
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ S + +FE L DA RG +++ K + +G+ ++LGTG VEL+ +
Sbjct: 331 VTGEKTSVLARAAFEVTVKHLLDAAARGDMEEFKGVVENIIIGQPIKLGTGMVELLMR 388
[194][TOP]
>UniRef100_A2BN35 DNA-directed RNA polymerase subunit A'' n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=A2BN35_HYPBU
Length = 424
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN +H + G+EAAR ++RE++ V G+ VD RHL L+AD MT G R R G
Sbjct: 288 TNSIHEIEEVLGIEAARTMLIREMKDVLDEQGLDVDIRHLMLVADIMTMTGRVRQIGRHG 347
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
+ SPF + +FE L A + G VD L A + VG V+ +GTG VE+
Sbjct: 348 VSGEKPSPFARAAFEMTTQNLYAAAVEGEVDRLLGVAETVIVGGVIRVGTGMVEV 402
[195][TOP]
>UniRef100_Q8TXI9 DNA-directed RNA polymerase largest subunit, the N-terminal part
n=1 Tax=Methanopyrus kandleri RepID=Q8TXI9_METKA
Length = 429
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND + V GVEA R I+ +++ V+ + GI VDPRH LI+D M+ G R+ +G
Sbjct: 296 TNDPKIVDVLLGVEAGRNAIIEQLEEVYESQGISVDPRHFMLISDMMSFWGELRSVRSVG 355
Query: 336 ----IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
+E SP K +FE + LT+ G V++L+ + VG+ V +GTG VEL
Sbjct: 356 GYSVMELKGSPLTKAAFEYVSRVLTETATSGDVEELRGVLENIIVGKPVPVGTGTVEL 413
[196][TOP]
>UniRef100_P11514 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus
acidocaldarius RepID=RPOA2_SULAC
Length = 393
Score = 82.8 bits (203), Expect = 1e-14
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++H + G+EAAR I RE++ V G+ VD RH+ L++D MT G R R G
Sbjct: 272 TNNIHEVEEVLGIEAARELISREIKKVLEEQGLDVDMRHIVLVSDIMTRTGDIRQIGRHG 331
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ S L + +FE L DA RG ++ K + +G+ + LGTG VEL +
Sbjct: 332 VTGEKSSVLARAAFEVTVKHLLDAAARGEREEFKGVIENIIIGQPIRLGTGIVELTMK 389
[197][TOP]
>UniRef100_A8MAA3 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Caldivirga
maquilingensis IC-167 RepID=A8MAA3_CALMQ
Length = 388
Score = 82.4 bits (202), Expect = 2e-14
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
++D+H + G+EAAR IMRE+++V G+ VD RHL ++AD MT G R R G
Sbjct: 269 SHDIHEVAEVLGIEAARTMIMRELKAVLDDQGLDVDTRHLMMVADVMTWDGKVRQIGRHG 328
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ VSP + +FE L +A G + K + GR V +GTG VEL+
Sbjct: 329 VAGQKVSPLARAAFEVTVKNLIEAAYMGESEKFKGVVENIISGRYVPIGTGYVELM 384
[198][TOP]
>UniRef100_O27126 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOA2_METTH
Length = 451
Score = 82.4 bits (202), Expect = 2e-14
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+H + G+EAAR I+ E + G+ VD RH+ L+AD MT G ++ R
Sbjct: 330 TTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRH 389
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
GI S + SFE L A++RG VD L + +G+ + LGTG V +V +
Sbjct: 390 GISGEKASVLARASFEETGKHLLRASIRGEVDHLTGIIENIIIGQPIPLGTGSVSVVMK 448
[199][TOP]
>UniRef100_Q6L2G0 DNA-directed RNA polymerase subunit A'''' n=1 Tax=Picrophilus
torridus RepID=Q6L2G0_PICTO
Length = 508
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ + G+EAAR I E + S G+ VD RHL L+AD MT G RA R G
Sbjct: 383 TNDIIEIEQVLGIEAARNAIYLEAERTLSEQGLNVDKRHLMLVADMMTFSGNVRAVGRQG 442
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I S L + +FE + L A L G VD L A + VG+ + LGTG + LV
Sbjct: 443 ISGRKSSVLARAAFEITSKHLLKAGLLGEVDQLAGVAENIIVGQPITLGTGAINLV 498
[200][TOP]
>UniRef100_Q12WS7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12WS7_METBU
Length = 386
Score = 82.0 bits (201), Expect = 2e-14
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN++ + +G+EAAR I++E G+ VD RHL L++D MT G + R
Sbjct: 262 STNNIGEIYEVFGIEAARFAIIKEASDTLREQGLTVDIRHLMLVSDIMTCDGEVKQIGRH 321
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI S F + +FE + L DA +RG +D+L + VG+ ++LGTG V LV
Sbjct: 322 GISGEKASVFARAAFEVTVNHLLDAGMRGDIDELNGVTENIIVGQPIKLGTGDVHLV 378
[201][TOP]
>UniRef100_P09847 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Winter RepID=RPOA2_METTW
Length = 449
Score = 82.0 bits (201), Expect = 2e-14
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+H + G+EAAR I+ E + G+ VD RH+ L+AD MT G ++ R
Sbjct: 330 TTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRH 389
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
GI S + SFE L A++RG VD L + +G+ + LGTG V ++ +
Sbjct: 390 GISGEKASVLARASFEETGKHLLRASIRGEVDHLTGIIENIIIGQPIPLGTGSVSVIMK 448
[202][TOP]
>UniRef100_Q74MX8 NEQ427 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX8_NANEQ
Length = 374
Score = 81.6 bits (200), Expect = 3e-14
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTND+H + G++AAR I+ E+Q V G+ +D R+L LIAD MT+ G R
Sbjct: 243 TTNDIHEIAKVLGIDAAREAIIEEIQKVLEEQGLEIDVRYLLLIADVMTYYGEVLGFTRH 302
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
G+ E SP + +FE L DA L G DDL++ + + + +GTG ++LV
Sbjct: 303 GLMERKPSPLERATFEVPFKNLADAALLGEKDDLRAVIVNVLINQPAPMGTGRIKLV 359
[203][TOP]
>UniRef100_A0B559 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosaeta
thermophila PT RepID=A0B559_METTP
Length = 384
Score = 81.3 bits (199), Expect = 4e-14
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN+++ + G+EAAR I+ E G+ VD RH+ L+AD MT G + R G
Sbjct: 260 TNNINEICEVLGIEAARNAIINEATETLREQGLQVDVRHIMLVADIMTCDGDVKQIGRHG 319
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
+ S + +FE + + DA +RG VDDL+ + VG+ + LGTG V+LV
Sbjct: 320 VSGEKASVLARAAFEVTVNHILDAAIRGDVDDLRGVTENVIVGQPIRLGTGDVQLV 375
[204][TOP]
>UniRef100_C8SAT4 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Ferroglobus
placidus DSM 10642 RepID=C8SAT4_FERPL
Length = 376
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN+++ + G+EAAR ++ E + G+ VD RH+ L+AD MT G + R G
Sbjct: 254 TNNIYEIYEVLGIEAARNAVINEALATLEEQGLEVDVRHIMLVADAMTADGELKQIGRHG 313
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQIG 160
+ L + +FE + L +A++RG VD L + VG+ ++LGTG VELV ++G
Sbjct: 314 VAGEKQSILARAAFEMTVNNLLEASVRGEVDRLNGITENIIVGQPIKLGTGDVELVLKLG 373
Query: 159 G 157
G
Sbjct: 374 G 374
[205][TOP]
>UniRef100_B1YC26 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=B1YC26_THENV
Length = 379
Score = 80.9 bits (198), Expect = 5e-14
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+H + G+EAARA + +E++ V G+ VD RH+ L+AD MT G + R G
Sbjct: 261 SNDLHEVEEVLGIEAARALVAQEIKRVLEEQGLDVDIRHMYLVADTMTWSGRLKPIGRHG 320
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + SP + +FE L +A++RG + K + GR V +GTG V L+ Q
Sbjct: 321 VVGAKESPLARAAFEVTVKTLVEASVRGEEEQFKGVVENIVAGRYVPVGTGIVRLLMQ 378
[206][TOP]
>UniRef100_P15353 DNA-directed RNA polymerase subunit A'' n=1 Tax=Halococcus morrhuae
RepID=RPOA2_HALMO
Length = 393
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343
T N++H + GVEAAR TI+ E + G+G V+ RHL L+AD MT +G + R
Sbjct: 263 TCNNIHEVYRNLGVEAARETIIDETMNTLEEQGLGDVNIRHLMLVADIMTAEGTIESIGR 322
Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
GI + + L + +FE + L DA + G VDDL + VG+ ++LGTG V L +
Sbjct: 323 HGISGNKNSVLARAAFEVTVNHLLDAAVHGEVDDLDGVTENVIVGKPIKLGTGDVNL--R 380
Query: 165 IGG 157
+GG
Sbjct: 381 MGG 383
[207][TOP]
>UniRef100_A1RWW4 DNA-directed RNA polymerase, subunit A' n=1 Tax=Thermofilum pendens
Hrk 5 RepID=A1RWW4_THEPD
Length = 403
Score = 80.5 bits (197), Expect = 6e-14
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN++ + G+EAARA I++E++ V +G+ VD RH+ ++AD MT+ G R R
Sbjct: 272 TTNNILEIYEVLGIEAARAAIIKEIKKVLDEHGLDVDWRHIMMVADAMTYSGKVRQVGRH 331
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVG-RVVELGTGCVEL 175
G+ L + SFE L +A LRG +D+L+ + +G + + LGTG V+L
Sbjct: 332 GVAGEKGSVLARASFEVTVKNLVEAALRGELDELRGVIENVIIGSKPIPLGTGSVKL 388
[208][TOP]
>UniRef100_P14247 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcus
vannielii SB RepID=RPOA2_METVS
Length = 386
Score = 80.5 bits (197), Expect = 6e-14
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN++ + GVEAAR I+RE+ + G+ VD RHL ++AD MT G + R
Sbjct: 259 TTNNIVEIQDVLGVEAARNAIIREMDATLGNQGLTVDKRHLMMVADLMTTDGVVKPIGRH 318
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI S + +FE L A++RG VDDL + VG+ + +GTGC+ +
Sbjct: 319 GIGGEKASVLARAAFEETVKHLYSASMRGYVDDLSGVVENIIVGKPISMGTGCINV 374
[209][TOP]
>UniRef100_Q8PUR2 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina
mazei RepID=RPOA2_METMA
Length = 408
Score = 80.5 bits (197), Expect = 6e-14
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+++ + G+EAAR I++E G+ VD RH+ L+AD MT G + R
Sbjct: 267 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVADLMTSDGEVKQIGRH 326
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+ +
Sbjct: 327 GISGEKASVFARAAFEVTVNHLLDAGMRGYVDQLQGVTENIIVGQPIRMGTGDVHLISR 385
[210][TOP]
>UniRef100_Q8TRB8 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina
acetivorans RepID=RPOA2_METAC
Length = 397
Score = 80.5 bits (197), Expect = 6e-14
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+++ + G+EAAR I++E G+ VD RH+ L+AD MT G + R
Sbjct: 264 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVADLMTCDGEVKQIGRH 323
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+ +
Sbjct: 324 GISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQGVTENIIVGQPIRMGTGDVHLISR 382
[211][TOP]
>UniRef100_A5ATH2 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ATH2_VITVI
Length = 814
Score = 80.1 bits (196), Expect = 8e-14
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI- 340
+N+VHAML TYGVEA RAT ++EV ++ +AYG+ + H S I DFM H GY+ NR
Sbjct: 641 SNNVHAMLNTYGVEATRATXIKEVFNISNAYGVKDNIHHXSEIVDFMIHSDGYQPMNRHG 700
Query: 339 GIESSVSPFLKMSFETAAHFL 277
GI SVS F KM+FE A+ F+
Sbjct: 701 GITESVSLFNKMTFEIASKFI 721
[212][TOP]
>UniRef100_Q03586 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermoplasma
acidophilum RepID=RPOA2_THEAC
Length = 508
Score = 80.1 bits (196), Expect = 8e-14
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TND+ + G+EAAR I+ E G+ VD RHL L+AD MT G RA R G
Sbjct: 384 TNDIVEIANVLGIEAARNAILNEALRTLQEQGLNVDVRHLMLVADMMTFSGSVRAVGRTG 443
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I S L + +FE L A + G VD L A + VG+ + LGTG V+++
Sbjct: 444 ISGRKSSVLARAAFEITTKHLLRAGIMGEVDKLAGVAENIIVGQPITLGTGAVDII 499
[213][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV M VT G+E RA ++ E++ V S G V+ RHL+++AD MT +G + R G
Sbjct: 1355 SNDVVEMFVTLGIEGVRAALLNEIRGVISFDGAYVNYRHLAILADIMTCRGHIMSITRHG 1414
Query: 336 IES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTG 187
I ++ SFE A L +A + G VDD+K A + +G++ +GTG
Sbjct: 1415 INRVETGALMRCSFEETADILLEAAMYGEVDDMKGVAENIMLGQMAPVGTG 1465
[214][TOP]
>UniRef100_Q0W8G8 DNA-directed RNA polymerase, subunit A2 n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W8G8_UNCMA
Length = 384
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN+++ + G+EAAR I++E S G+ VD RH+ L+AD MT G + R G
Sbjct: 261 TNNINEIAEVLGIEAARNAIIKETLDTLSEQGLTVDIRHIMLVADMMTIDGEVKQIGRHG 320
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I + L + +FE + L DA + G VD+L + VG+ ++LGTG VEL+
Sbjct: 321 ISGEKASVLSRAAFEVTVNHLLDAAVAGEVDELTGVTENVIVGQPIQLGTGDVELL 376
[215][TOP]
>UniRef100_C7DHC3 RNA polymerase Rpb1 domain 5 n=1 Tax=Candidatus Micrarchaeum
acidiphilum ARMAN-2 RepID=C7DHC3_9EURY
Length = 347
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N++ + YGVEAAR I E++S G V RH+SL+AD MT+ G R+ R G
Sbjct: 219 SNNLFDVFKVYGVEAARNMIANELKSTIENEGFTVSFRHVSLLADTMTYNGAIRSAGRHG 278
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I S F + ++E +A++ G VD+LK A + +G+ +++GTG V+LV
Sbjct: 279 IAGEKASVFARAAYEETVKHFVNASIFGEVDELKGVAENILIGKQIKVGTGRVKLV 334
[216][TOP]
>UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9VCM2_MONBE
Length = 1414
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -2
Query: 513 NDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIGI 334
N V + T G+EAAR+ IM +VQ V S YGI ++PRH L++D MT +G R GI
Sbjct: 1270 NHVMELEQTLGIEAARSIIMDQVQYVMSNYGIHINPRHTMLMSDLMTFKGEVLGITRFGI 1329
Query: 333 -ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ S F+ SFE L DA LRG+ D + + + +G + +GTG +L+ +
Sbjct: 1330 AKMKESVFMLASFEKTTDHLFDAALRGTTDSVDGVSECIILGVPMRIGTGLFKLLHE 1386
[217][TOP]
>UniRef100_Q464Y8 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q464Y8_METBF
Length = 426
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+++ + G+EAAR I++E G+ VD RH+ L++D MT G + R
Sbjct: 266 STNNINEIYEVLGIEAARNAIIKEATDTLREQGLTVDIRHIMLVSDLMTCDGEVKQIGRH 325
Query: 339 GIE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI S F + +FE + L DA +RG VD L+ + VG+ + +GTG V L+
Sbjct: 326 GISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQGVTENIIVGQPIRMGTGDVHLI 382
[218][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
RepID=Q9BMP2_STYMT
Length = 1678
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+ +L G+EA R +++ E++ V S+YGI V+ RHLS + D MT +G A R G
Sbjct: 1243 SNDIIEILRVLGIEAVRMSLINELRFVLSSYGIYVNYRHLSTLCDVMTQRGILTAITRHG 1302
Query: 336 IES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
I SP K SFE L +A + D LK + +G++ GTGC E+
Sbjct: 1303 INRVDSSPLRKCSFEETVEILLEAAVFAETDPLKGITENIIMGQLAPFGTGCFEI 1357
[219][TOP]
>UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M626_ENTHI
Length = 1379
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N + + G+EAAR+TI+ E+++V AYG+ +D RHL L++D MT +G R
Sbjct: 1246 TSNHIAVVEKVLGIEAARSTIISEIKNVMDAYGLSIDVRHLLLLSDLMTFKGVILGITRY 1305
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI + S F SFE L DA + D++K + + VG V LGTG ++++
Sbjct: 1306 GISKMKDSVFTFASFERTNDHLFDAAVHSRKDEIKGVSESIIVGNQVGLGTGLMQIL 1362
[220][TOP]
>UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0EG66_ENTDI
Length = 1379
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N + + G+EAAR+TI+ E+++V AYG+ +D RHL L++D MT +G R
Sbjct: 1246 TSNHIAVVEKVLGIEAARSTIISEIKNVMDAYGLSIDVRHLLLLSDLMTFKGVILGITRY 1305
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
GI + S F SFE L DA + D++K + + VG V LGTG ++++
Sbjct: 1306 GISKMKDSVFTFASFERTNDHLFDAAVHSRKDEIKGVSESIIVGNQVGLGTGLMQIL 1362
[221][TOP]
>UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V991_NOSCE
Length = 1335
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N + + G+EAARA I+ E++ V +GI +DPRH+ L+AD MT++G R
Sbjct: 1213 TSNAILEIQEVLGIEAARAHIISEIEYVVGKHGIKIDPRHVMLLADTMTYKGEVLGITRF 1272
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI + S S + SFE + L +A +R D++K + + +G+ + +GTG V+L
Sbjct: 1273 GISKMSCSTLMLASFEQTSEHLFEAAIRSRSDEVKGVSESIILGKNIGIGTGEVQL 1328
[222][TOP]
>UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XZZ0_ASPFC
Length = 1453
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+V M G+EAAR TI++E+ V +G+DPRH+ L+AD MT++G R
Sbjct: 1296 STNNVMEMRDVLGIEAARVTIVQEISEVMK--DMGIDPRHMQLLADVMTYKGEVLGITRF 1353
Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++
Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIMGKTVSLGTGAMEVVRKL 1413
[223][TOP]
>UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D5Y9_NEOFI
Length = 1453
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+V M G+EAAR TI++E+ V +G+DPRH+ L+AD MT++G R
Sbjct: 1296 STNNVMEMRDVLGIEAARVTIVQEISEVMK--DMGIDPRHMQLLADVMTYKGEVLGITRF 1353
Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++
Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLIEGVSECIIMGKTVSLGTGAMEVVRKL 1413
[224][TOP]
>UniRef100_A4WNA0 DNA-directed RNA polymerase, subunit A' n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=A4WNA0_PYRAR
Length = 379
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+H + G+EAARA + +E++ V G+ VD RH+ ++AD MT G R R G
Sbjct: 261 SNDLHEVEEVLGIEAARALVAQEIKRVLDEQGLDVDIRHMYMVADTMTWSGRLRPIGRHG 320
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ + SP + +FE L +A++RG + K + G+ + +GTG V L+ Q
Sbjct: 321 VVGTKESPLARAAFEVTVKTLIEASVRGEEEAFKGVVESIIAGKYIPIGTGIVRLLMQ 378
[225][TOP]
>UniRef100_A3DMP5 DNA-directed RNA polymerase, subunit A' n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMP5_STAMF
Length = 421
Score = 78.6 bits (192), Expect = 2e-13
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + G+EAARA I+RE ++V G+ VD RHL L+AD MT G R R+G
Sbjct: 275 TNNIAEIEEILGIEAARAAIIRETKNVLEDQGLDVDIRHLILLADMMTWTGKIRQVGRMG 334
Query: 336 IE-SSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
I S + +FE L +A + G VD LK + +G+ V +GTG VE+
Sbjct: 335 IAGEKPSVLARATFEMTVQKLVEAAVEGEVDMLKGVPENVIIGQPVPVGTGIVEI 389
[226][TOP]
>UniRef100_B3A010 RNA polymerase subunit C n=1 Tax=Haloarcula japonica
RepID=B3A010_HALJP
Length = 395
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343
T N++H + GVEAAR T++ E + G+ V+ RHL L+AD MT++G + R
Sbjct: 272 TCNNIHEIYRELGVEAARETLINETMNTLEEQGLDDVNVRHLMLVADIMTNEGTIESIGR 331
Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI S L + +FE + L DA + G VD+L + VG+ ++LGTG V L
Sbjct: 332 HGISGSKDSVLARAAFEVTVNHLLDAAIHGEVDELDGVTENVIVGKPIKLGTGDVNL 388
[227][TOP]
>UniRef100_Q5UZR5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Haloarcula
marismortui RepID=RPOA2_HALMA
Length = 395
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343
T N++H + GVEAAR T++ E + G+ V+ RHL L+AD MT++G + R
Sbjct: 272 TCNNIHEIYRELGVEAARETLINETMNTLEEQGLDDVNVRHLMLVADIMTNEGTIESIGR 331
Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI S L + +FE + L DA + G VD+L + VG+ ++LGTG V L
Sbjct: 332 HGISGSKDSVLARAAFEVTVNHLLDAAIHGEVDELDGVTENVIVGKPIKLGTGDVNL 388
[228][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ + T+G+E AR I E+ +V S G V+ RHLSL+ D MT +G A R
Sbjct: 1278 TSNDIVEIFSTFGIEGARKAIEAEMYNVISFGGSYVNARHLSLLCDIMTTKGYLMAITRH 1337
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
G+ + +K SFE L +A G D LK + + +G+V+ GTGC +L+
Sbjct: 1338 GVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLL 1394
[229][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ + T+G+E AR I E+ +V S G V+ RHLSL+ D MT +G A R
Sbjct: 842 TSNDIVEIFSTFGIEGARKAIEAEMYNVISFGGSYVNARHLSLLCDIMTTKGYLMAITRH 901
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
G+ + +K SFE L +A G D LK + + +G+V+ GTGC +L+
Sbjct: 902 GVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLL 958
[230][TOP]
>UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V3B7_PHANO
Length = 1473
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+N V + G+EAARATIMRE+ +V + +DPRH++L+AD MT +G R G
Sbjct: 1336 SNHVMEVRTVLGIEAARATIMREISAVMG--NMDIDPRHMALLADVMTFKGDVYGITRFG 1393
Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
++ + L++ SFE L +A RG D + + + +G+ ++LGTG +++V+ +
Sbjct: 1394 LQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSESIIMGQSMKLGTGALQVVRPL 1452
[231][TOP]
>UniRef100_Q8ZYQ7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrobaculum
aerophilum RepID=RPOA2_PYRAE
Length = 379
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+ND+H + G+EA RA + +E++ V G+ VD RH+ L+AD MT G R R G
Sbjct: 261 SNDLHEVEEVLGIEATRALVAQEIKRVLEEQGLDVDIRHMYLVADAMTWSGRLRPIGRHG 320
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
+ S SP + +FE L +A++RG + K + G+ V +GTG V L+ Q
Sbjct: 321 VVGSKESPLARAAFEVTVKTLIEASVRGEDELFKGVVESIIAGKYVPIGTGIVRLLMQ 378
[232][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 77.4 bits (189), Expect = 5e-13
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV + +G+EAAR ++RE+++V S G V+ RHLSL+ D MT +G + R G
Sbjct: 1343 SNDVSEIFHVFGIEAARRALLREIRAVISFDGAYVNYRHLSLLCDIMTQKGYLMSITRHG 1402
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I + P +K SFE L A + G VD LK + VG++ GTG +++
Sbjct: 1403 INRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIM 1458
[233][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 77.4 bits (189), Expect = 5e-13
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
+NDV + +G+EAAR ++RE+++V S G V+ RHLSL+ D MT +G + R G
Sbjct: 1343 SNDVSEIFHVFGIEAARRALLREIRAVISFDGAYVNYRHLSLLCDIMTQKGYLMSITRHG 1402
Query: 336 I-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
I + P +K SFE L A + G VD LK + VG++ GTG +++
Sbjct: 1403 INRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIM 1458
[234][TOP]
>UniRef100_C9RDK7 RNA polymerase Rpb1 domain 5 n=1 Tax=Methanocaldococcus vulcanius M7
RepID=C9RDK7_9EURY
Length = 799
Score = 77.4 bits (189), Expect = 5e-13
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R
Sbjct: 669 TTNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDVRHLMLVADIMTADGEVKPIGRH 728
Query: 339 GIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
G+ L + +FE L + RG VD LK + VG+ + LGTGCV+L+
Sbjct: 729 GVAGEKGSVLARAAFEETVKHLYASAERGDVDKLKGVIENVIVGKPIYLGTGCVDLM 785
[235][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ ++ G+EA R +++E+++V S G V+ RHL+++AD MT++G A R
Sbjct: 1346 TSNDIVEIIQVLGIEAVRNALLKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRH 1405
Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI P ++ SFE L DA + DD+K + +G++ LGTG E+
Sbjct: 1406 GINRVETGPLMRCSFEETVEILMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEV 1461
[236][TOP]
>UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017927B1
Length = 1355
Score = 77.0 bits (188), Expect = 7e-13
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N+ + G+EA+RATI+ E+ SV +GI +DPRH LIAD MT +G R
Sbjct: 1201 TSNNTFQVWNALGIEASRATIISEIDSVMGNHGISIDPRHPMLIADLMTSRGELLGITRF 1260
Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV 172
G+ L + SFE + L DA G D + + + +G + LGTG +L+
Sbjct: 1261 GLSKMKESVLNLASFEKTSDHLFDAAYYGQTDTINGVSESIIMGIPINLGTGFFKLI 1317
[237][TOP]
>UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8C4M1_THAPS
Length = 1422
Score = 77.0 bits (188), Expect = 7e-13
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN + + T GVEAAR +I E+ + +AYGIG+D RHL L++D MT +G R
Sbjct: 1281 TTNHIIEVEQTLGVEAARTSISSEISYIMNAYGIGIDSRHLLLLSDVMTFKGEVLGITRF 1340
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQ 166
G+ + S + SFE L DA + G D + + + +G + +GTG +L+++
Sbjct: 1341 GVAKMRESVLMLASFEKTTDHLLDAAVHGRTDAIDGVSECIIMGIPIPIGTGLFKLLKR 1399
[238][TOP]
>UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2U3T5_ASPOR
Length = 1447
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+V M G+EAAR TI+RE+ V + +DPRH+ L+AD MT++G R
Sbjct: 1296 STNNVMEMREVLGIEAARTTIVREISEVMK--DMDIDPRHMQLLADVMTYKGEVLGITRF 1353
Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++
Sbjct: 1354 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLVEGVSECIIMGKTVSLGTGAMEVVRRM 1413
[239][TOP]
>UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FEK3_NANOT
Length = 1443
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN + M G+EAAR TI+ E+ SV S G+ +DPRH+ L+AD MT++G R G
Sbjct: 1289 TNHIMEMRDVLGIEAARTTIIDEISSVMS--GMSIDPRHMQLLADVMTYKGEVLGITRFG 1346
Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ L++ SFE A L DA G D ++ + + +G+ + LGTG +E+V+ +
Sbjct: 1347 LAKIRDSVLQLASFEKTADHLFDAGGAGRRDAVQGVSECIIMGKTISLGTGSMEVVRDL 1405
[240][TOP]
>UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8NTG3_ASPFN
Length = 1436
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
+TN+V M G+EAAR TI+RE+ V + +DPRH+ L+AD MT++G R
Sbjct: 1285 STNNVMEMREVLGIEAARTTIVREISEVMK--DMDIDPRHMQLLADVMTYKGEVLGITRF 1342
Query: 339 GIESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
G+ L++ SFE A L DA G D ++ + + +G+ V LGTG +E+V+++
Sbjct: 1343 GLAKMRDSVLQLASFEKTADHLFDAGGAGRTDLVEGVSECIIMGKTVSLGTGAMEVVRRM 1402
[241][TOP]
>UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q6K6_MALGO
Length = 1376
Score = 77.0 bits (188), Expect = 7e-13
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN V M G+EAAR++I RE+ +++G+ +DPRH+ L+AD MT++G R G
Sbjct: 1244 TNHVMEMQQVLGIEAARSSIYREIDYTMASHGMSIDPRHVMLLADVMTYKGEVLGITRFG 1303
Query: 336 IESSVSPFLKM-SFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVE-LGTGCVELVQQI 163
+ L + SFE L DA L G D + + + +G + +GTG LV Q
Sbjct: 1304 VAKMKDSVLMLASFEKTTDHLFDAALFGKSDSISGVSESIIMGNPAQTVGTGMPALVSQK 1363
Query: 162 GGLAP 148
LAP
Sbjct: 1364 PTLAP 1368
[242][TOP]
>UniRef100_C7P942 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanocaldococcus
fervens AG86 RepID=C7P942_METFA
Length = 387
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R G
Sbjct: 260 TNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDIRHLMLVADMMTADGEVKPIGRHG 319
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
+ L + +FE L A RG VD LK + VG+ + LGTGCVEL
Sbjct: 320 VAGEKGSVLARAAFEETVKHLYAAAERGDVDKLKGVIENVIVGKPIYLGTGCVEL 374
[243][TOP]
>UniRef100_Q58446 Mja rpoA2 intein n=1 Tax=Methanocaldococcus jannaschii
RepID=RPOA2_METJA
Length = 859
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++ + G+EAAR I+ E+++ G+ VD RHL L+AD MT G + R G
Sbjct: 731 TNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDIRHLMLVADIMTADGEVKPIGRHG 790
Query: 336 IESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
+ L + +FE L A RG VD LK + VG+ + LGTGCVEL
Sbjct: 791 VAGEKGSVLARAAFEETVKHLYAAAERGDVDKLKGVIENVIVGKPIYLGTGCVEL 845
[244][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 76.6 bits (187), Expect = 9e-13
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ + G+EA R + RE+ V S G V+ RHL+L+ D MT +G A R
Sbjct: 1328 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1387
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV--- 172
G+ P +K SFE L +A G D +K + + +G++ GTGC +L+
Sbjct: 1388 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1447
Query: 171 QQIGGLAPGH 142
++ G ++P +
Sbjct: 1448 EKCGAMSPSY 1457
[245][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 76.6 bits (187), Expect = 9e-13
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+ND+ + G+EA R + RE+ V S G V+ RHL+L+ D MT +G A R
Sbjct: 1328 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1387
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELV--- 172
G+ P +K SFE L +A G D +K + + +G++ GTGC +L+
Sbjct: 1388 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1447
Query: 171 QQIGGLAPGH 142
++ G ++P +
Sbjct: 1448 EKCGAMSPSY 1457
[246][TOP]
>UniRef100_Q3IUN1 DNA-directed RNA polymerase subunit A'' (Subunit C) n=1
Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IUN1_NATPD
Length = 894
Score = 76.6 bits (187), Expect = 9e-13
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIG-VDPRHLSLIADFMTHQGGYRACNR 343
T N++H + G+EAAR I+ E + G+ V+ RHL L+AD MT+ G + R
Sbjct: 764 TCNNIHEIHNNLGIEAAREAIIEETMNTLEEQGLDDVNIRHLMLVADIMTNNGEIESIGR 823
Query: 342 IGIESSVSPFL-KMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI + L + +FE + L DA + G VDDL + VG+ ++LGTG V+L
Sbjct: 824 HGISGNKDSVLARAAFEVTVNHLLDAAIHGEVDDLDGVTENVIVGKPIKLGTGDVDL 880
[247][TOP]
>UniRef100_A8TEB9 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanococcus
voltae A3 RepID=A8TEB9_METVO
Length = 387
Score = 76.6 bits (187), Expect = 9e-13
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
TTN++ + GVEAAR I+ E+ + S G+ VDPRHL +++D MT G + R
Sbjct: 261 TTNNIIEIQDVLGVEAARNAIIYEMAATLSNQGLTVDPRHLMMVSDLMTTDGVVKPIGRH 320
Query: 339 GI-ESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 175
GI S + +FE L A++RG D+L + VG+ + +GTGC+ +
Sbjct: 321 GIGGEKASVLARAAFEETVKHLYSASMRGYSDELDGVVENIIVGKPISIGTGCINV 376
[248][TOP]
>UniRef100_Q9V113 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus abyssi
RepID=RPOA2_PYRAB
Length = 397
Score = 76.6 bits (187), Expect = 9e-13
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 516 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 337
TN++H + G+EAAR I+ E+ + G+ VD RH+ L+AD MT G R R G
Sbjct: 268 TNNIHEIAEVLGIEAARNAIIEEIMNTMREQGLEVDIRHIMLVADIMTLDGVVRPIGRHG 327
Query: 336 -IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
+ S + +FE L +A RG VD+L + +G+ V +GTG V+L ++
Sbjct: 328 VVGEKASVLARAAFEITVQHLFEAAERGEVDNLSGVIENVLIGQPVPVGTGMVKLTMKL 386
[249][TOP]
>UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding / zinc ion binding n=1 Tax=Arabidopsis thaliana
RepID=UPI0001505876
Length = 1376
Score = 76.3 bits (186), Expect = 1e-12
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N+V + T G+EAAR TI+ E+ +V +G+ +D RH+ L+AD MT++G R
Sbjct: 1242 TSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRT 1301
Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+ S ++ SFE L A G VD+++ + +G ++LGTG ++++Q+
Sbjct: 1302 GIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRT 1361
Query: 162 GGL 154
L
Sbjct: 1362 DDL 1364
[250][TOP]
>UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LVH0_ARATH
Length = 1383
Score = 76.3 bits (186), Expect = 1e-12
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = -2
Query: 519 TTNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRI 340
T+N+V + T G+EAAR TI+ E+ +V +G+ +D RH+ L+AD MT++G R
Sbjct: 1249 TSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRT 1308
Query: 339 GIES-SVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 163
GI+ S ++ SFE L A G VD+++ + +G ++LGTG ++++Q+
Sbjct: 1309 GIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTGILKVLQRT 1368
Query: 162 GGL 154
L
Sbjct: 1369 DDL 1371