[UP]
[1][TOP]
>UniRef100_Q10MU3 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10MU3_ORYSJ
Length = 352
Score = 122 bits (306), Expect = 1e-26
Identities = 65/129 (50%), Positives = 84/129 (65%)
Frame = +2
Query: 134 GSRTGGGLLTMGKDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWD 313
G+++ G K + K KLPEHLE++R V C N A F AMG+DNS
Sbjct: 5 GTKSRKGTDDEPKQEEKNKLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVS 64
Query: 314 FAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSII 493
F +F++V+N++ + MEFDMIG D ++ANA RRILIAEVPT+AIE V M +NTS+I
Sbjct: 65 ADKFCKNFKVVVNRLTEDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVI 124
Query: 494 QDEVLSHRL 520
DEVLSHRL
Sbjct: 125 ADEVLSHRL 133
[2][TOP]
>UniRef100_Q10MU2 Os03g0295400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10MU2_ORYSJ
Length = 379
Score = 122 bits (306), Expect = 1e-26
Identities = 65/129 (50%), Positives = 84/129 (65%)
Frame = +2
Query: 134 GSRTGGGLLTMGKDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWD 313
G+++ G K + K KLPEHLE++R V C N A F AMG+DNS
Sbjct: 5 GTKSRKGTDDEPKQEEKNKLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVS 64
Query: 314 FAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSII 493
F +F++V+N++ + MEFDMIG D ++ANA RRILIAEVPT+AIE V M +NTS+I
Sbjct: 65 ADKFCKNFKVVVNRLTEDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVI 124
Query: 494 QDEVLSHRL 520
DEVLSHRL
Sbjct: 125 ADEVLSHRL 133
[3][TOP]
>UniRef100_B9GFY9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GFY9_POPTR
Length = 390
Score = 119 bits (298), Expect = 1e-25
Identities = 59/117 (50%), Positives = 83/117 (70%)
Frame = +2
Query: 170 KDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVI 349
KD +G+LP H+ + V C N T+ + ++ +MGVDNS +F+++F+I +
Sbjct: 32 KDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRIKV 91
Query: 350 NKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+D++ MEFDMIG D A+ANA RRILI+EVPT+AIE VF+ NNTS+IQDEVL+HRL
Sbjct: 92 IALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRL 148
[4][TOP]
>UniRef100_C5XXF5 Putative uncharacterized protein Sb04g006420 n=1 Tax=Sorghum
bicolor RepID=C5XXF5_SORBI
Length = 370
Score = 118 bits (296), Expect = 2e-25
Identities = 61/113 (53%), Positives = 79/113 (69%)
Frame = +2
Query: 182 KGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMD 361
+ KLP++LE++R V C + + TF AMGVDNS F +F+I IN++
Sbjct: 19 ENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVSVEKFCKNFKIEINRLT 78
Query: 362 REVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ MEFDMIG D +IANA RRILIAEVPT+AIE +FM++NTS+I DEVLSHRL
Sbjct: 79 EDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSHRL 131
[5][TOP]
>UniRef100_C6T9J6 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T9J6_SOYBN
Length = 233
Score = 118 bits (295), Expect = 3e-25
Identities = 63/140 (45%), Positives = 88/140 (62%)
Frame = +2
Query: 101 NSSYTQGGVSGGSRTGGGLLTMGKDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANT 280
+SS +S S G + D KLP HLEL + V C + + +T+ +
Sbjct: 8 SSSSEDESMSEQSNELGLDFILSLDNVPSKLPPHLELFKTRVLCNNDAPVHTDTVQYSGA 67
Query: 281 FNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIE 460
+ MGVDNS +F ++F++ + ++ +EFDMIG DPAIANA RRIL+AEVPT+AIE
Sbjct: 68 YAIMGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILVAEVPTMAIE 127
Query: 461 HVFMINNTSIIQDEVLSHRL 520
V++ NNTS++QDEVLSHRL
Sbjct: 128 RVYIANNTSVVQDEVLSHRL 147
[6][TOP]
>UniRef100_UPI00019857F6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019857F6
Length = 372
Score = 117 bits (293), Expect = 5e-25
Identities = 58/116 (50%), Positives = 81/116 (69%)
Frame = +2
Query: 173 DKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVIN 352
D KG+LP H+EL+R V C + + + +++MGVDNS F ++F++ +
Sbjct: 11 DVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNFRVEVI 70
Query: 353 KMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ + MEFDMIG DP+IANA RRILIAE+PT+AIE V + NNTSI+QDEVL+HRL
Sbjct: 71 RLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHRL 126
[7][TOP]
>UniRef100_C6TAS0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TAS0_SOYBN
Length = 388
Score = 117 bits (293), Expect = 5e-25
Identities = 63/140 (45%), Positives = 88/140 (62%)
Frame = +2
Query: 101 NSSYTQGGVSGGSRTGGGLLTMGKDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANT 280
+SS +S S G + D KLP HLEL + V C + + +T+ +
Sbjct: 3 SSSSEDESMSEQSNELGLDFILSLDNVPSKLPPHLELFKTRVLCNNDAPVHTDTVQYSGA 62
Query: 281 FNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIE 460
+ +GVDNS +F ++F++ + ++ +EFDMIG DPAIANA RRILIAEVPT+AIE
Sbjct: 63 YAILGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIE 122
Query: 461 HVFMINNTSIIQDEVLSHRL 520
V++ NNTS++QDEVLSHRL
Sbjct: 123 RVYIANNTSVVQDEVLSHRL 142
[8][TOP]
>UniRef100_A7Q9B1 Chromosome chr19 scaffold_66, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q9B1_VITVI
Length = 362
Score = 117 bits (293), Expect = 5e-25
Identities = 58/116 (50%), Positives = 81/116 (69%)
Frame = +2
Query: 173 DKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVIN 352
D KG+LP H+EL+R V C + + + +++MGVDNS F ++F++ +
Sbjct: 11 DVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNFRVEVI 70
Query: 353 KMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ + MEFDMIG DP+IANA RRILIAE+PT+AIE V + NNTSI+QDEVL+HRL
Sbjct: 71 RLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHRL 126
[9][TOP]
>UniRef100_B9S9W7 DNA-directed RNA polymerase I/III subunits, putative n=1
Tax=Ricinus communis RepID=B9S9W7_RICCO
Length = 374
Score = 116 bits (290), Expect = 1e-24
Identities = 57/116 (49%), Positives = 81/116 (69%)
Frame = +2
Query: 173 DKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVIN 352
D G+LP HL+L+R V C + + I + + ++GVDNS F+D+F++ +
Sbjct: 21 DVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFRDNFKVEVI 80
Query: 353 KMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ ++ MEFDMIG D AIANA RRILI+E+PT+AIE V + NNTS+IQDEVL+HRL
Sbjct: 81 QLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVLAHRL 136
[10][TOP]
>UniRef100_UPI0000DF0848 Os02g0723600 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DF0848
Length = 327
Score = 115 bits (289), Expect = 1e-24
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
KLPEHLE++R V C N A ++AMG+DNS F +F++ I+++ +
Sbjct: 21 KLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D +IANA RRILIAE+PT+AIE V M++NTS+I DEVLSHRL
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRL 131
[11][TOP]
>UniRef100_Q6Z5L9 Os02g0723600 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6Z5L9_ORYSJ
Length = 300
Score = 115 bits (289), Expect = 1e-24
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
KLPEHLE++R V C N A ++AMG+DNS F +F++ I+++ +
Sbjct: 21 KLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D +IANA RRILIAE+PT+AIE V M++NTS+I DEVLSHRL
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRL 131
[12][TOP]
>UniRef100_B8AHP1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AHP1_ORYSI
Length = 332
Score = 115 bits (289), Expect = 1e-24
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
KLPEHLE++R V C N A ++AMG+DNS F +F++ I+++ +
Sbjct: 21 KLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D +IANA RRILIAE+PT+AIE V M++NTS+I DEVLSHRL
Sbjct: 81 DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRL 131
[13][TOP]
>UniRef100_B4FAR4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FAR4_MAIZE
Length = 372
Score = 114 bits (284), Expect = 5e-24
Identities = 59/113 (52%), Positives = 76/113 (67%)
Frame = +2
Query: 182 KGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMD 361
+ KLP++LEL+R V C + + F AMG+DNS F +F+I IN++
Sbjct: 21 ENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNSVSVDKFCKNFKIEINRLT 80
Query: 362 REVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ MEFDMIG D +IANA RRILI+EVPT+AIE VFM +N S+I DEVLSHRL
Sbjct: 81 EDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIADEVLSHRL 133
[14][TOP]
>UniRef100_C1E0F4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E0F4_9CHLO
Length = 394
Score = 112 bits (281), Expect = 1e-23
Identities = 54/111 (48%), Positives = 80/111 (72%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
++ +++ +R+FVTCG N + + + +MG+DNS+ +F+++F++ I MD E
Sbjct: 3 EIAANIQTQREFVTCGADENRHTAEHQYSGAYASMGIDNSFSMQSFRENFKMEITHMDAE 62
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ F+M G PAIANA RRILIAEVPT+AIE V+M+NNTS+IQDEV +HRL
Sbjct: 63 RVVFEMQGISPAIANAFRRILIAEVPTMAIEKVYMVNNTSVIQDEVFAHRL 113
[15][TOP]
>UniRef100_C1MRA1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MRA1_9CHLO
Length = 410
Score = 111 bits (277), Expect = 3e-23
Identities = 53/106 (50%), Positives = 76/106 (71%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
++ ++ FVTC N +VN + + A+G+D+++ F+D F++ + +D E +EF+
Sbjct: 35 IQKQKAFVTCASDENKHVNEHAYSGAYAALGIDSAFTAEKFRDEFKLEVTHLDDEKVEFE 94
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M G PAIANA RRILIAEVPT+AIE VFM+NNTS+IQDEV +HRL
Sbjct: 95 MQGLSPAIANAFRRILIAEVPTMAIEKVFMVNNTSVIQDEVFAHRL 140
[16][TOP]
>UniRef100_A9T5P0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T5P0_PHYPA
Length = 360
Score = 107 bits (267), Expect = 5e-22
Identities = 56/111 (50%), Positives = 74/111 (66%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
+LP HLEL+R V C ++ + + A GVDNS F + ++ I M+ E
Sbjct: 12 ELPPHLELQRTRVVCAPDAPSYTESVQYSGAYMAYGVDNSLRIEDFCKNLRVEIISMNEE 71
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+EFD++G D AIANA RRILIAEVPT+AIE V++ NNTS+IQDEVL+HRL
Sbjct: 72 DIEFDIVGIDAAIANAFRRILIAEVPTMAIEKVYIANNTSVIQDEVLAHRL 122
[17][TOP]
>UniRef100_Q39216 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q39216_ARATH
Length = 385
Score = 106 bits (265), Expect = 8e-22
Identities = 54/110 (49%), Positives = 73/110 (66%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREV 370
LP HLEL+R V C N + IT + +++MGVDNS F + F++ + +
Sbjct: 33 LPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDFKVDVISLTETD 92
Query: 371 MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M FDMIG IANA RRIL+AE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 93 MVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVANNTSVIQDEVLAHRL 142
[18][TOP]
>UniRef100_UPI00019261EE PREDICTED: similar to DNA-directed RNA polymerases I and III
subunit RPAC1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019261EE
Length = 354
Score = 106 bits (264), Expect = 1e-21
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 254 VNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILI 433
+NT SA + G D+SW+F FK F+I + K+++ MEFDMIG D +IANA RRILI
Sbjct: 20 INTAGSAFPGSYTGYDDSWNFKKFKKKFKIDVIKLNQNEMEFDMIGIDASIANAFRRILI 79
Query: 434 AEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
AEVPT+AIE VF+ NNT+I+QDE+L+HRL
Sbjct: 80 AEVPTMAIEKVFIFNNTTIVQDEILAHRL 108
[19][TOP]
>UniRef100_B7Q825 Transferase, putative n=1 Tax=Ixodes scapularis RepID=B7Q825_IXOSC
Length = 344
Score = 106 bits (264), Expect = 1e-21
Identities = 57/107 (53%), Positives = 71/107 (66%)
Frame = +2
Query: 200 HLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEF 379
HL R V + N T TF G+D+SWD F+ +FQI I +D MEF
Sbjct: 3 HLHKMRTHVHMREHDLLNTETSDYPGTF--AGIDDSWDLKKFERNFQIGIVSLDDMTMEF 60
Query: 380 DMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
DMIG +PAIANA+RRIL+AEVPT+A + VFM NNTSI+QDEVL+HR+
Sbjct: 61 DMIGVNPAIANAIRRILLAEVPTMAPDKVFMYNNTSIVQDEVLAHRI 107
[20][TOP]
>UniRef100_Q6DRM8 RNA polymerase I 140 kDa subunit n=1 Tax=Danio rerio
RepID=Q6DRM8_DANRE
Length = 343
Score = 105 bits (263), Expect = 1e-21
Identities = 58/102 (56%), Positives = 70/102 (68%)
Frame = +2
Query: 215 RDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGC 394
RD V G+ NV+T N G D++WDF FK +F+I I D +EFDMIG
Sbjct: 8 RDRVILGEFGVKNVHTTDYPG--NYPGYDDTWDFEKFKKNFRIEIISSDENTLEFDMIGI 65
Query: 395 DPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D AIANA RRIL+AEVPT+AIE VF+ NNTSIIQDE+L+HRL
Sbjct: 66 DAAIANAFRRILLAEVPTMAIEKVFIYNNTSIIQDEILAHRL 107
[21][TOP]
>UniRef100_A2ATX2 Polymerase (RNA) I polypeptide C n=1 Tax=Danio rerio
RepID=A2ATX2_DANRE
Length = 197
Score = 105 bits (263), Expect = 1e-21
Identities = 58/102 (56%), Positives = 70/102 (68%)
Frame = +2
Query: 215 RDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGC 394
RD V G+ NV+T N G D++WDF FK +F+I I D +EFDMIG
Sbjct: 27 RDRVILGEFGVKNVHTTDYPG--NYPGYDDTWDFEKFKKNFRIEIISSDENTLEFDMIGI 84
Query: 395 DPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D AIANA RRIL+AEVPT+AIE VF+ NNTSIIQDE+L+HRL
Sbjct: 85 DAAIANAFRRILLAEVPTMAIEKVFIYNNTSIIQDEILAHRL 126
[22][TOP]
>UniRef100_A2ATX1 Polymerase (RNA) I polypeptide C n=2 Tax=Danio rerio
RepID=A2ATX1_DANRE
Length = 362
Score = 105 bits (263), Expect = 1e-21
Identities = 58/102 (56%), Positives = 70/102 (68%)
Frame = +2
Query: 215 RDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGC 394
RD V G+ NV+T N G D++WDF FK +F+I I D +EFDMIG
Sbjct: 27 RDRVILGEFGVKNVHTTDYPG--NYPGYDDTWDFEKFKKNFRIEIISSDENTLEFDMIGI 84
Query: 395 DPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D AIANA RRIL+AEVPT+AIE VF+ NNTSIIQDE+L+HRL
Sbjct: 85 DAAIANAFRRILLAEVPTMAIEKVFIYNNTSIIQDEILAHRL 126
[23][TOP]
>UniRef100_Q6IP84 MGC78824 protein n=1 Tax=Xenopus laevis RepID=Q6IP84_XENLA
Length = 347
Score = 104 bits (259), Expect = 4e-21
Identities = 54/109 (49%), Positives = 78/109 (71%)
Frame = +2
Query: 194 PEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVM 373
P ++L R+ V G+ NV+T N MG D++W+ F+ +F+I I KM+ +++
Sbjct: 4 PGSVQLIRERVVLGEFGLRNVHTTDFPG--NYMGYDDTWNQGRFEKNFRIDIVKMEDDIL 61
Query: 374 EFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
EFDM+G D +IANA RRIL++EVPTVA+E V++ NNTSIIQDE+L+HRL
Sbjct: 62 EFDMVGIDASIANAFRRILLSEVPTVAVEKVYVYNNTSIIQDEILAHRL 110
[24][TOP]
>UniRef100_UPI00004DA7E9 DNA-directed RNA polymerases I and III subunit RPAC1 (RNA
polymerases I and III subunit AC1) (DNA-directed RNA
polymerase I subunit C) (DNA- directed RNA polymerases I
and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
(AC40). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00004DA7E9
Length = 347
Score = 102 bits (255), Expect = 1e-20
Identities = 52/110 (47%), Positives = 79/110 (71%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREV 370
+P ++ R+ V G+ NV+T N MG +++W++ F+++F+I I KM+ +
Sbjct: 3 VPGSVQEMRERVVLGEFGIRNVHTTDFPG--NYMGYNDTWNYGRFENNFRIDIVKMEGDT 60
Query: 371 MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+EFDM+G D +IANA RRIL+AEVPT+A+E V++ NNTSIIQDE+L+HRL
Sbjct: 61 LEFDMVGIDASIANAFRRILLAEVPTMAVEKVYVYNNTSIIQDEILAHRL 110
[25][TOP]
>UniRef100_UPI00016E11AB UPI00016E11AB related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AB
Length = 347
Score = 102 bits (254), Expect = 2e-20
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N D+SWD A FK +FQI + +D MEFDM+G D AI NA RRIL+AEVPT+AIE
Sbjct: 29 NYPNFDDSWDMAKFKKNFQIDLMHLDESQMEFDMMGVDAAITNAFRRILLAEVPTMAIEK 88
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDEVL+HRL
Sbjct: 89 VFIYNNTSIVQDEVLAHRL 107
[26][TOP]
>UniRef100_UPI00016E11AA UPI00016E11AA related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AA
Length = 351
Score = 102 bits (254), Expect = 2e-20
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N D+SWD A FK +FQI + +D MEFDM+G D AI NA RRIL+AEVPT+AIE
Sbjct: 33 NYPNFDDSWDMAKFKKNFQIDLMHLDESQMEFDMMGVDAAITNAFRRILLAEVPTMAIEK 92
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDEVL+HRL
Sbjct: 93 VFIYNNTSIVQDEVLAHRL 111
[27][TOP]
>UniRef100_UPI000186AA5B hypothetical protein BRAFLDRAFT_133039 n=1 Tax=Branchiostoma
floridae RepID=UPI000186AA5B
Length = 308
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/89 (55%), Positives = 66/89 (74%)
Frame = +2
Query: 254 VNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILI 433
+NT ++ N G D++W A F++ F++ I ++ +EFDM+G D AIANA RRIL+
Sbjct: 19 INTHSTDFPGNYAGYDDTWSLAKFEEKFRVNIVSLEGSELEFDMVGIDAAIANAFRRILL 78
Query: 434 AEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
AEVPT+AIE VF+ NNTSIIQDEVL+HRL
Sbjct: 79 AEVPTMAIEKVFVHNNTSIIQDEVLAHRL 107
[28][TOP]
>UniRef100_C1BKA8 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Osmerus
mordax RepID=C1BKA8_OSMMO
Length = 351
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/88 (54%), Positives = 65/88 (73%)
Frame = +2
Query: 257 NTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIA 436
N T+ N G D++W+ F+ +F+I I +MD MEFDM+G D AIANA RRI++A
Sbjct: 24 NVHTTDYPGNYPGYDDAWNMQKFQKNFRIDIVEMDETTMEFDMVGIDAAIANAFRRIMLA 83
Query: 437 EVPTVAIEHVFMINNTSIIQDEVLSHRL 520
EVPT+A+E V++ NNTSIIQDE+L+HRL
Sbjct: 84 EVPTMAVEKVYIYNNTSIIQDEILAHRL 111
[29][TOP]
>UniRef100_A4S0F8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S0F8_OSTLU
Length = 360
Score = 99.8 bits (247), Expect = 1e-19
Identities = 46/108 (42%), Positives = 70/108 (64%)
Frame = +2
Query: 197 EHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVME 376
E LE +R +V G N NVN + + ++G D ++ F+++F + + D E
Sbjct: 3 ERLEEQRHYVRAGAEHNANVNEVAYGGAYASVGKDFAFSAERFRETFALTLTTSDEERCV 62
Query: 377 FDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
F++ GC PA ANA RRI+++EVPT+AIE VF++NNTS++ DEV +HRL
Sbjct: 63 FELEGCSPAFANAFRRIILSEVPTMAIEKVFVVNNTSVVADEVFAHRL 110
[30][TOP]
>UniRef100_UPI0000F2C148 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1
Tax=Monodelphis domestica RepID=UPI0000F2C148
Length = 346
Score = 99.4 bits (246), Expect = 1e-19
Identities = 46/79 (58%), Positives = 61/79 (77%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD + F+ F++ + MD +EFDMIG D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYCGYDDAWDQSRFEREFRVDVVHMDENSLEFDMIGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDE+L+HRL
Sbjct: 92 VFVYNNTSIVQDEILAHRL 110
[31][TOP]
>UniRef100_UPI0000EDC949 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0000EDC949
Length = 346
Score = 99.4 bits (246), Expect = 1e-19
Identities = 45/79 (56%), Positives = 63/79 (79%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD + F+ F++ + +M+ + +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYAGFDDAWDQSRFEQGFRVDVVQMEEDSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDEVL+HRL
Sbjct: 92 VFVYNNTSIMQDEVLAHRL 110
[32][TOP]
>UniRef100_A1L3C2 Polr1c protein n=2 Tax=Mus musculus RepID=A1L3C2_MOUSE
Length = 347
Score = 98.6 bits (244), Expect = 2e-19
Identities = 44/79 (55%), Positives = 62/79 (78%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + +MD + +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 33 NYAGYDDAWDQNRFEKNFRVDVVQMDEDTLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 92
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 93 VLVYNNTSIVQDEILAHRL 111
[33][TOP]
>UniRef100_UPI000180C3EB PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Ciona intestinalis
RepID=UPI000180C3EB
Length = 345
Score = 98.2 bits (243), Expect = 3e-19
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +2
Query: 257 NTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIA 436
NT T+ + G +++WDF F D+F I + ++ + M+FDM+G D AIANA RRILIA
Sbjct: 20 NTHTTTYPRSYAGFNDAWDFQKFADNFCINVIELGPDSMQFDMLGVDAAIANAFRRILIA 79
Query: 437 EVPTVAIEHVFMINNTSIIQDEVLSHRL 520
EVPT+AIE V++ NNT++IQDEVL+HRL
Sbjct: 80 EVPTMAIEKVYIYNNTTVIQDEVLAHRL 107
[34][TOP]
>UniRef100_C1BZA1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Esox
lucius RepID=C1BZA1_ESOLU
Length = 239
Score = 98.2 bits (243), Expect = 3e-19
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +2
Query: 248 FNVNTI-TSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRR 424
FNV + T+ N G D++W F+ +F+I + +MD MEFDM+G D +IANA RR
Sbjct: 20 FNVKNVHTTDYPGNYPGYDDTWSLQKFQKNFRIDVVQMDETCMEFDMVGIDASIANAFRR 79
Query: 425 ILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IL+AEVPT+A+E VF+ NNTSIIQDEVL+ RL
Sbjct: 80 ILLAEVPTMAVEKVFIYNNTSIIQDEVLAQRL 111
[35][TOP]
>UniRef100_C1BYW4 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Esox
lucius RepID=C1BYW4_ESOLU
Length = 263
Score = 98.2 bits (243), Expect = 3e-19
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +2
Query: 248 FNVNTI-TSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRR 424
FNV + T+ N G D++W F+ +F+I + +MD MEFDM+G D +IANA RR
Sbjct: 20 FNVKNVHTTDYPGNYPGYDDTWSLQKFQKNFRIDVVQMDETCMEFDMVGIDASIANAFRR 79
Query: 425 ILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IL+AEVPT+A+E VF+ NNTSIIQDEVL+ RL
Sbjct: 80 ILLAEVPTMAVEKVFIYNNTSIIQDEVLAQRL 111
[36][TOP]
>UniRef100_UPI000194C203 PREDICTED: polymerase (RNA) I polypeptide C, 30kDa n=1
Tax=Taeniopygia guttata RepID=UPI000194C203
Length = 346
Score = 97.8 bits (242), Expect = 4e-19
Identities = 49/102 (48%), Positives = 72/102 (70%)
Frame = +2
Query: 215 RDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGC 394
RD V G+ NV+T N G +++WD F+++F++ + + + + +EFDM+G
Sbjct: 11 RDRVLLGEFGVRNVHTTDFPG--NYPGYEDAWDQRRFEEAFRVDVIREEEDALEFDMVGI 68
Query: 395 DPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D AIANA RRIL+AEVPT+A+E VF+ NNTSI+QDE+L+HRL
Sbjct: 69 DAAIANAFRRILLAEVPTMAVEKVFVYNNTSIVQDEILAHRL 110
[37][TOP]
>UniRef100_UPI0000E80092 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 1 n=1
Tax=Gallus gallus RepID=UPI0000E80092
Length = 300
Score = 97.4 bits (241), Expect = 5e-19
Identities = 44/79 (55%), Positives = 63/79 (79%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+++F++ + + + V+EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 26 NYPGYDDAWDQRRFEEAFRVDVVREEDGVLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 85
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDE+L+HRL
Sbjct: 86 VFVYNNTSIVQDEILAHRL 104
[38][TOP]
>UniRef100_UPI00003ACD10 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 2 n=1
Tax=Gallus gallus RepID=UPI00003ACD10
Length = 346
Score = 97.4 bits (241), Expect = 5e-19
Identities = 44/79 (55%), Positives = 63/79 (79%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+++F++ + + + V+EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYPGYDDAWDQRRFEEAFRVDVVREEDGVLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
VF+ NNTSI+QDE+L+HRL
Sbjct: 92 VFVYNNTSIVQDEILAHRL 110
[39][TOP]
>UniRef100_B5X7Z3 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Salmo
salar RepID=B5X7Z3_SALSA
Length = 353
Score = 97.1 bits (240), Expect = 7e-19
Identities = 47/88 (53%), Positives = 64/88 (72%)
Frame = +2
Query: 257 NTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIA 436
N T+ N G D++W+ F+ +F+I + +MD +EFDM+G D AIANA RRIL+A
Sbjct: 30 NVHTTDYPGNYPGYDDTWNLQKFQKNFRIDVVQMDETSLEFDMVGIDAAIANAFRRILLA 89
Query: 437 EVPTVAIEHVFMINNTSIIQDEVLSHRL 520
EVPT+A+E V + NNTSIIQDE+L+HRL
Sbjct: 90 EVPTMAVEKVLIYNNTSIIQDEILAHRL 117
[40][TOP]
>UniRef100_Q5RJK9 Polymerase (RNA) I polypeptide C n=2 Tax=Rattus norvegicus
RepID=Q5RJK9_RAT
Length = 346
Score = 97.1 bits (240), Expect = 7e-19
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDESTLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[41][TOP]
>UniRef100_B3S4F3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S4F3_TRIAD
Length = 349
Score = 97.1 bits (240), Expect = 7e-19
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +2
Query: 251 NVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRIL 430
N +T+ F+ G D++W +F+ +F+I I K+D E MEFDMIG D +IANA RRI+
Sbjct: 21 NTHTVDFPGAFH--GYDDAWSLNSFRKNFKIEIIKVDNEEMEFDMIGIDASIANAYRRIM 78
Query: 431 IAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++EVP +AIE V + NNTSIIQDEVL+HRL
Sbjct: 79 LSEVPAMAIEKVVIHNNTSIIQDEVLAHRL 108
[42][TOP]
>UniRef100_UPI00017F0A34 PREDICTED: RNA polymerase I subunit hRPA39 n=1 Tax=Sus scrofa
RepID=UPI00017F0A34
Length = 346
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[43][TOP]
>UniRef100_Q5JTE2 Polymerase (RNA) I polypeptide C, 30kDa (Fragment) n=2 Tax=Homo
sapiens RepID=Q5JTE2_HUMAN
Length = 139
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 6 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 63
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 64 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 109
[44][TOP]
>UniRef100_UPI000059D8DA UPI000059D8DA related cluster n=1 Tax=Homo sapiens
RepID=UPI000059D8DA
Length = 140
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[45][TOP]
>UniRef100_A7SL38 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SL38_NEMVE
Length = 342
Score = 96.7 bits (239), Expect = 9e-19
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = +2
Query: 254 VNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILI 433
+NT +S N D++W F++ F+I I ++ MEFDMIG D ++ANA RRIL+
Sbjct: 19 INTHSSDFPGNYTDYDDTWTQEKFEEKFKINITRLTPSDMEFDMIGIDASVANAFRRILL 78
Query: 434 AEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
AEVPT+AIE VF+ NNTSIIQDEVL+HRL
Sbjct: 79 AEVPTMAIEKVFLYNNTSIIQDEVLAHRL 107
[46][TOP]
>UniRef100_Q5JTE4 Polymerase (RNA) I polypeptide C, 30kDa n=1 Tax=Homo sapiens
RepID=Q5JTE4_HUMAN
Length = 314
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[47][TOP]
>UniRef100_B4DEC2 cDNA FLJ57708, highly similar to DNA-directed RNA polymerase I 40
kDa polypeptide (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DEC2_HUMAN
Length = 150
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[48][TOP]
>UniRef100_P52432 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Mus
musculus RepID=RPAC1_MOUSE
Length = 346
Score = 96.7 bits (239), Expect = 9e-19
Identities = 43/79 (54%), Positives = 61/79 (77%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + +MD + +EFDM+G D AIANA RRIL+A VPT+A+E
Sbjct: 32 NYAGYDDAWDQNRFEKNFRVGVVQMDEDTLEFDMVGIDAAIANAFRRILLARVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[49][TOP]
>UniRef100_O15160-2 Isoform 2 of DNA-directed RNA polymerases I and III subunit RPAC1
n=1 Tax=Homo sapiens RepID=O15160-2
Length = 342
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[50][TOP]
>UniRef100_O15160 DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Homo
sapiens RepID=RPAC1_HUMAN
Length = 346
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[51][TOP]
>UniRef100_UPI000155FEE2 PREDICTED: similar to DNA-directed RNA polymerases I and III
subunit RPAC1 (RNA polymerases I and III subunit AC1)
(DNA-directed RNA polymerase I subunit C) (DNA-directed
RNA polymerases I and III 40 kDa polypeptide) (RPA40)
(RPA39) (RPC40) (AC40) n=1 Tax=Equus caballus
RepID=UPI000155FEE2
Length = 346
Score = 96.3 bits (238), Expect = 1e-18
Identities = 50/106 (47%), Positives = 71/106 (66%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDHFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
M+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 65 MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 110
[52][TOP]
>UniRef100_UPI00005A26F8 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 6 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F8
Length = 328
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[53][TOP]
>UniRef100_UPI00005A26F7 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 5 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F7
Length = 338
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[54][TOP]
>UniRef100_UPI00005A26F6 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 4 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F6
Length = 296
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[55][TOP]
>UniRef100_UPI00005A26F5 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 3 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F5
Length = 144
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[56][TOP]
>UniRef100_UPI00005A26F4 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 2 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F4
Length = 281
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[57][TOP]
>UniRef100_UPI00004A557E PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 1 n=1 Tax=Canis
lupus familiaris RepID=UPI00004A557E
Length = 346
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[58][TOP]
>UniRef100_Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Bos
taurus RepID=RPAC1_BOVIN
Length = 346
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++WD F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A+E
Sbjct: 32 NYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEK 91
Query: 464 VFMINNTSIIQDEVLSHRL 520
V + NNTSI+QDE+L+HRL
Sbjct: 92 VLVYNNTSIVQDEILAHRL 110
[59][TOP]
>UniRef100_Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 n=1
Tax=Dictyostelium discoideum RepID=RPAC1_DICDI
Length = 345
Score = 95.1 bits (235), Expect = 3e-18
Identities = 52/119 (43%), Positives = 75/119 (63%)
Frame = +2
Query: 164 MGKDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQI 343
+ K G +LE +R VT + N + + ++G DNS++ FK++F+I
Sbjct: 2 VNKSTTNGVSDPNLENKRTKVTLTNSGVENARGTYYSGAYTSVGYDNSFNLNRFKENFKI 61
Query: 344 VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I + F+MIG D IANALRRI+I+E+PT+AIE V++INNTSI+QDEVL+HRL
Sbjct: 62 NILSESANELVFEMIGIDAPIANALRRIMISEIPTMAIEKVYIINNTSILQDEVLAHRL 120
[60][TOP]
>UniRef100_Q171Q8 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti
RepID=Q171Q8_AEDAE
Length = 335
Score = 94.7 bits (234), Expect = 3e-18
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D WDF FK QIVI + + +EFDM+G +PAIANA RR++++EVP++AIE V + N
Sbjct: 32 DELWDFERFKQQLQIVIVRYEENELEFDMVGVNPAIANAFRRLMLSEVPSMAIEKVHIYN 91
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HRL
Sbjct: 92 NTSIIQDEVLAHRL 105
[61][TOP]
>UniRef100_Q7SHT0 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Neurospora crassa RepID=Q7SHT0_NEUCR
Length = 378
Score = 94.7 bits (234), Expect = 3e-18
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Frame = +2
Query: 194 PEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGV----DNSWDFAAFKDSFQIVINKMD 361
PE +E R + ++ N T+T+ + + G D+SWD F++S ++V ++ D
Sbjct: 19 PEEVEKR-------NTVHINAETVTNVTSTDFPGFYPGEDHSWDIEKFRESVRVVFHQND 71
Query: 362 REVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+F +IG D +IANA RRI+IA++PT+AIE +FM NNTS+IQDEVL HRL
Sbjct: 72 PYEAQFSLIGVDASIANAFRRIMIADIPTLAIEDIFMWNNTSVIQDEVLGHRL 124
[62][TOP]
>UniRef100_O08521 Homologous to 40kD subunit of RNA-polymerase I and III (Fragment)
n=1 Tax=Cricetulus griseus RepID=O08521_CRIGR
Length = 347
Score = 94.4 bits (233), Expect = 4e-18
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DN WD FK + ++ I +D+E M F++ G D +IANA RRILIAE+PT+A E V++IN
Sbjct: 33 DNIWDLDKFKKNLKVSITSLDQETMVFEISGIDASIANAFRRILIAEIPTLAFEFVYIIN 92
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVLSHR+
Sbjct: 93 NTSIIQDEVLSHRI 106
[63][TOP]
>UniRef100_A8N510 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N510_COPC7
Length = 356
Score = 94.4 bits (233), Expect = 4e-18
Identities = 40/76 (52%), Positives = 61/76 (80%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G+D+SW + FK + ++ I ++ + +EFD++G D +IANA RRI+IAEVPT+AIEHV++
Sbjct: 32 GLDDSWSLSKFKKNLKVQITRLSQHTIEFDLVGVDASIANAFRRIMIAEVPTIAIEHVYV 91
Query: 473 INNTSIIQDEVLSHRL 520
+NTS+I DEVL+HR+
Sbjct: 92 WDNTSVIVDEVLAHRI 107
[64][TOP]
>UniRef100_O94616 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Schizosaccharomyces pombe RepID=RPAC1_SCHPO
Length = 348
Score = 94.4 bits (233), Expect = 4e-18
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DN WD FK + ++ I +D+E M F++ G D +IANA RRILIAE+PT+A E V++IN
Sbjct: 34 DNIWDLDKFKKNLKVSITSLDQETMVFEISGIDASIANAFRRILIAEIPTLAFEFVYIIN 93
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVLSHR+
Sbjct: 94 NTSIIQDEVLSHRI 107
[65][TOP]
>UniRef100_B0W725 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Culex
quinquefasciatus RepID=B0W725_CULQU
Length = 335
Score = 94.0 bits (232), Expect = 6e-18
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ WDF FK QIV+ + + +EFDMIG PAIANA RR++++EVP++AIE V + N
Sbjct: 32 DDFWDFERFKRQLQIVVVRYEENELEFDMIGVSPAIANAFRRLMLSEVPSMAIEKVHIYN 91
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HRL
Sbjct: 92 NTSIIQDEVLAHRL 105
[66][TOP]
>UniRef100_Q6CQS0 KLLA0D14861p n=1 Tax=Kluyveromyces lactis RepID=Q6CQS0_KLULA
Length = 334
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T TS+ F D NSWD FK++F + I +D + FD++ D +IANA
Sbjct: 7 VEYNRVTNTSSTDFPGFSSDQDNSWDLEKFKETFDVQIESLDEREVNFDLVHVDTSIANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E+V+ NNTS++QDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAPEYVYFFNNTSVLQDEVLAHRI 101
[67][TOP]
>UniRef100_Q4PBM5 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PBM5_USTMA
Length = 320
Score = 92.4 bits (228), Expect = 2e-17
Identities = 43/76 (56%), Positives = 60/76 (78%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G +N++ AA + ++++ ++ EFD+IG D +IANA+RR+L+AEVPTVAIEHV++
Sbjct: 79 GENNAFSLAAANQNLKVIVTRLSDASCEFDLIGVDASIANAVRRVLMAEVPTVAIEHVYI 138
Query: 473 INNTSIIQDEVLSHRL 520
NNTSIIQDEVLSHRL
Sbjct: 139 WNNTSIIQDEVLSHRL 154
[68][TOP]
>UniRef100_UPI000151BDE7 conserved hypothetical protein n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151BDE7
Length = 333
Score = 92.0 bits (227), Expect = 2e-17
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F ++ D+SWD FKD+F+I I+ + FD+I D ++ANA
Sbjct: 7 IEYNRVTNTTSTDFPGHSSNEDHSWDIEKFKDNFEINISHLTERTANFDLINIDTSVANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E V++ NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAAESVYIFNNTSVIQDEVLAHRI 101
[69][TOP]
>UniRef100_C5LDA1 DNA-directed RNA polymerases I and III 40 kDa polypeptide, putative
n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LDA1_9ALVE
Length = 365
Score = 92.0 bits (227), Expect = 2e-17
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +2
Query: 251 NVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRIL 430
N T + + +MG+DNS+D F+ ++ + + EV+E D++G DP IANALRRI+
Sbjct: 26 NPQTADDSGVYASMGIDNSYDREEFQRRLKMKVQRASDEVVEVDVVGIDPPIANALRRIM 85
Query: 431 IAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IAE+PT+AIE ++ NT +I DE+L+HRL
Sbjct: 86 IAEIPTIAIEKCYVYQNTGVIHDEILAHRL 115
[70][TOP]
>UniRef100_A5DPW5 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DPW5_PICGU
Length = 333
Score = 92.0 bits (227), Expect = 2e-17
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F ++ D+SWD FKD+F+I I+ + FD+I D ++ANA
Sbjct: 7 IEYNRVTNTTSTDFPGHSSNEDHSWDIEKFKDNFEINISHLTERTANFDLINIDTSVANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E V++ NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAAESVYIFNNTSVIQDEVLAHRI 101
[71][TOP]
>UniRef100_C5P1D3 DNA-directed RNA polymerase, putative n=1 Tax=Coccidioides
posadasii C735 delta SOWgp RepID=C5P1D3_COCP7
Length = 382
Score = 91.7 bits (226), Expect = 3e-17
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTIT--SANTFNAM--GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T SA F G D+SW FK++FQ+ +K D F +IG D A+A
Sbjct: 17 IGINPETVTHISATDFPGHWPGEDHSWSVNKFKENFQVTFHKNDSFEATFSLIGVDAAVA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRILIAE+P++AIE VF+ NNTS++ DEVLSHRL
Sbjct: 77 NAFRRILIAEIPSLAIEFVFIHNNTSVLHDEVLSHRL 113
[72][TOP]
>UniRef100_Q1DYH9 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1DYH9_COCIM
Length = 382
Score = 91.3 bits (225), Expect = 4e-17
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTIT--SANTFNAM--GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T SA F G D+SW FK++FQ+ +K D F +IG D A+A
Sbjct: 17 IGINPETVTHISATDFPGHWPGEDHSWSVNKFKENFQVTFHKNDPFEATFSLIGVDAAVA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRILIAE+P++AIE VF+ NNTS++ DEVLSHRL
Sbjct: 77 NAFRRILIAEIPSLAIEFVFIHNNTSVLHDEVLSHRL 113
[73][TOP]
>UniRef100_B6JXY4 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JXY4_SCHJY
Length = 349
Score = 91.3 bits (225), Expect = 4e-17
Identities = 45/74 (60%), Positives = 54/74 (72%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DNSW+ FK I I +D M FD+ G D +I NA RRILIAE+PT+AIE V++IN
Sbjct: 34 DNSWNLEEFKKKLNIKITSLDDLNMTFDISGIDASIVNAFRRILIAEIPTLAIEFVYIIN 93
Query: 479 NTSIIQDEVLSHRL 520
NTSI+QDEVLSHRL
Sbjct: 94 NTSILQDEVLSHRL 107
[74][TOP]
>UniRef100_C9SI18 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Verticillium albo-atrum VaMs.102 RepID=C9SI18_9PEZI
Length = 375
Score = 90.9 bits (224), Expect = 5e-17
Identities = 42/79 (53%), Positives = 59/79 (74%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G DNSW F+++F++ +++ F +IG D +IANALRRILI+E+PT+AIE
Sbjct: 36 NYPGEDNSWSLDTFRENFRVRYHQLSPSESSFSLIGVDASIANALRRILISEIPTLAIET 95
Query: 464 VFMINNTSIIQDEVLSHRL 520
V++ NNTS+IQDEVL+HRL
Sbjct: 96 VYIYNNTSVIQDEVLAHRL 114
[75][TOP]
>UniRef100_A7TDY1 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TDY1_VANPO
Length = 335
Score = 90.5 bits (223), Expect = 6e-17
Identities = 43/95 (45%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F D N+WD FKD +I I+ ++ FD+I D +IANA
Sbjct: 7 IEYNRVTNTTSTDFPGFSKDDLNAWDVNKFKDDLEINISSINSREANFDLINIDTSIANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA+E+V+ +NNTS++QDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAVEYVYFLNNTSVLQDEVLAHRI 101
[76][TOP]
>UniRef100_Q014V0 RNA polymerase subunit (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q014V0_OSTTA
Length = 382
Score = 90.1 bits (222), Expect = 8e-17
Identities = 44/111 (39%), Positives = 68/111 (61%)
Frame = +2
Query: 188 KLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDRE 367
K+ +E ++ ++ G N N I + +M + ++ AF+++F + I E
Sbjct: 22 KMLAKIEEQKKYLIAGADRNANAKEIAYGGAYASMEGEGAFSVDAFRETFALTITDASEE 81
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ F+M GC A ANA RRI+I+EVPT+AIE V+MINNTS++ DEV +HRL
Sbjct: 82 RVVFEMEGCSAAFANAFRRIIISEVPTMAIEKVYMINNTSVVPDEVFAHRL 132
[77][TOP]
>UniRef100_B2A971 Predicted CDS Pa_1_8610 n=1 Tax=Podospora anserina
RepID=B2A971_PODAN
Length = 372
Score = 90.1 bits (222), Expect = 8e-17
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Frame = +2
Query: 251 NVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANAL 418
N+ T+T ++ + G D++WD FK F + ++ D F +IG D +IANA
Sbjct: 20 NLETVTDVSSTDFPGHYPGEDHAWDIERFKRGFSVEFHQNDPHEASFSLIGIDASIANAF 79
Query: 419 RRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IA+VPT+AIE+VF+ NNTS+IQDEVL+HRL
Sbjct: 80 RRIMIADVPTLAIENVFVWNNTSVIQDEVLAHRL 113
[78][TOP]
>UniRef100_Q6BV37 DEHA2C05654p n=1 Tax=Debaryomyces hansenii RepID=Q6BV37_DEBHA
Length = 335
Score = 89.7 bits (221), Expect = 1e-16
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T TS+ F ++ D +WD FKDSF+I I+ + FD+I D +IANA
Sbjct: 8 IEYNRVTNTSSTDFPGHSSNGDFAWDIEKFKDSFEINISHLSERSSTFDLIHIDTSIANA 67
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E V++ NNTS+IQDEVL+HR+
Sbjct: 68 FRRIMISEVPSVAAETVYVFNNTSVIQDEVLAHRI 102
[79][TOP]
>UniRef100_Q2HFB1 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2HFB1_CHAGB
Length = 374
Score = 89.4 bits (220), Expect = 1e-16
Identities = 42/76 (55%), Positives = 57/76 (75%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G D+SWD +F+ F++ ++ D F +IG D +IANA RRI+IA++PT+AIE VF+
Sbjct: 38 GEDHSWDIESFRRGFRVEFHQNDPYEASFSLIGIDASIANAFRRIMIADIPTLAIETVFI 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVLSHRL
Sbjct: 98 NNNTSVIQDEVLSHRL 113
[80][TOP]
>UniRef100_UPI000175846B PREDICTED: similar to CG3756 CG3756-PA n=1 Tax=Tribolium castaneum
RepID=UPI000175846B
Length = 338
Score = 89.0 bits (219), Expect = 2e-16
Identities = 39/75 (52%), Positives = 56/75 (74%)
Frame = +2
Query: 296 VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMI 475
+D WD FK F++VI + + +EFD+IG P +AN RR+++++VPT+AIE V ++
Sbjct: 30 LDEKWDLKTFKKRFRVVIVRSEENELEFDLIGIHPFLANTFRRLMLSDVPTMAIEKVHIL 89
Query: 476 NNTSIIQDEVLSHRL 520
NNTSIIQDEVL+HRL
Sbjct: 90 NNTSIIQDEVLAHRL 104
[81][TOP]
>UniRef100_Q6FXP6 Strain CBS138 chromosome B complete sequence n=1 Tax=Candida
glabrata RepID=Q6FXP6_CANGA
Length = 334
Score = 88.6 bits (218), Expect = 2e-16
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F N+WD F+++F I ++ + + FDMIG D ++ANA
Sbjct: 7 IEYNRVTNTASTDFPGYSSQGANAWDVERFRETFDIQVSSHEERELNFDMIGIDTSLANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP VA E+V++ NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMIAEVPAVAPEYVYIQNNTSVIQDEVLAHRI 101
[82][TOP]
>UniRef100_Q5KIG6 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q5KIG6_CRYNE
Length = 350
Score = 88.6 bits (218), Expect = 2e-16
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G D+SW+ FK + ++ +EFD++G D +IANALRR LIAEVPTVAIE V++
Sbjct: 33 GEDHSWNLQKFKQDLVASVQRLTPSTIEFDLVGVDASIANALRRTLIAEVPTVAIEEVYV 92
Query: 473 INNTSIIQDEVLSHRL 520
NNTSI+QDEVL HR+
Sbjct: 93 WNNTSIMQDEVLCHRV 108
[83][TOP]
>UniRef100_B3LK74 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=3
Tax=Saccharomyces cerevisiae RepID=B3LK74_YEAS1
Length = 335
Score = 88.6 bits (218), Expect = 2e-16
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F D N W+ FK F++ I+ +D FD+I D +IANA
Sbjct: 7 IEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINIDTSIANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E+V+ NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101
[84][TOP]
>UniRef100_A1C7I5 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus clavatus RepID=A1C7I5_ASPCL
Length = 374
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKM 358
+P EL R + + N T+T+ + + G + W+ FKD F++ ++
Sbjct: 5 IPSQEELERRRI-----VGINAETVTNIPSTDFPGHWPGESHEWNLEKFKDGFRVEFHRN 59
Query: 359 DREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D F +IG DP+IANA RRIL+AEVPT+AIE+VF+ NNTS+IQDEVL+ RL
Sbjct: 60 DPFESSFSLIGVDPSIANAFRRILMAEVPTLAIEYVFVHNNTSVIQDEVLASRL 113
[85][TOP]
>UniRef100_P07703 DNA-directed RNA polymerases I and III subunit RPAC1 n=3
Tax=Saccharomyces cerevisiae RepID=RPAC1_YEAST
Length = 335
Score = 88.6 bits (218), Expect = 2e-16
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F D N W+ FK F++ I+ +D FD+I D +IANA
Sbjct: 7 IEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINIDTSIANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E+V+ NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRI 101
[86][TOP]
>UniRef100_C3Z3J6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z3J6_BRAFL
Length = 290
Score = 87.8 bits (216), Expect = 4e-16
Identities = 49/93 (52%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
Frame = +2
Query: 254 VNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREV----MEFDMIGCDPAIANALR 421
+NT ++ N G D++W A F++ + + R V +EFDM+G D AIANA R
Sbjct: 19 INTHSTDFPGNYAGYDDTWSLAKFEE---VKVPSEHRVVEGSELEFDMVGIDAAIANAFR 75
Query: 422 RILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RIL+AEVPT+AIE VF+ NNTSIIQDEVL+HRL
Sbjct: 76 RILLAEVPTMAIEKVFVHNNTSIIQDEVLAHRL 108
[87][TOP]
>UniRef100_UPI00015B4B82 PREDICTED: similar to bifunctional aminoacyl-tRNA synthetase n=1
Tax=Nasonia vitripennis RepID=UPI00015B4B82
Length = 1549
Score = 87.4 bits (215), Expect = 5e-16
Identities = 42/81 (51%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQI-VINKMDREV-MEFDMIGCDPAIANALRRILIAEVPTVAI 457
N + + W FK +FQI ++++ + + +EFD+IGC A+ANA RRI+++EVP++AI
Sbjct: 1230 NLLHLQEDWTIDKFKKAFQIKIVSESENKCELEFDIIGCSAALANAYRRIMLSEVPSMAI 1289
Query: 458 EHVFMINNTSIIQDEVLSHRL 520
E V+MINNTS+IQDEVL+HRL
Sbjct: 1290 EKVYMINNTSLIQDEVLAHRL 1310
[88][TOP]
>UniRef100_Q29590 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sus scrofa
RepID=Q29590_PIG
Length = 88
Score = 87.4 bits (215), Expect = 5e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +2
Query: 284 NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEH 463
N G D++W F+ +F++ + MD +EFDM+G D AIANA RRIL+AEVPT+A E
Sbjct: 6 NYSGYDDAWAQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAXEK 65
Query: 464 VFMINNTSIIQDEVLSHR 517
V + NNTSI+Q E+L+HR
Sbjct: 66 VLVYNNTSIVQGEILAHR 83
[89][TOP]
>UniRef100_C5DTY7 ZYRO0C12364p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DTY7_ZYGRC
Length = 335
Score = 87.4 bits (215), Expect = 5e-16
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVD--NSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F D N WD FK++F + I + FD++ D +IANA
Sbjct: 7 IEYNRVTNTTSTDFPGFSKDGDNVWDIEKFKNTFDVRIGSLTEREANFDLVHVDTSIANA 66
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E+V+ +NNTS+IQDEVL+HR+
Sbjct: 67 FRRIMISEVPSVATEYVYFLNNTSVIQDEVLAHRI 101
[90][TOP]
>UniRef100_UPI000186EDAD DNA-directed RNA polymerase I 40 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186EDAD
Length = 347
Score = 87.0 bits (214), Expect = 7e-16
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ W+ FK F++VI K++ MEFD++G + A+ANA RRIL++EVP++AIE VF+ N
Sbjct: 31 DDVWNHNKFKKKFKVVIVKLNDTEMEFDLVGINCAVANAFRRILLSEVPSMAIEKVFVSN 90
Query: 479 NTSIIQDEVLSHRL 520
NT++I+DEVL+HRL
Sbjct: 91 NTTLIKDEVLAHRL 104
[91][TOP]
>UniRef100_Q6C4T2 YALI0E23947p n=1 Tax=Yarrowia lipolytica RepID=Q6C4T2_YARLI
Length = 339
Score = 86.7 bits (213), Expect = 9e-16
Identities = 39/76 (51%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G D++WD F + Q+ I+ + FD+IG D ++ANA RRI+IA++PT+A+E VF+
Sbjct: 31 GADDAWDLDKFDKNLQVKIHSLTDNYSNFDLIGIDTSLANAFRRIMIADIPTIAVEEVFI 90
Query: 473 INNTSIIQDEVLSHRL 520
NTSIIQDEVL+HRL
Sbjct: 91 HANTSIIQDEVLAHRL 106
[92][TOP]
>UniRef100_C5FSZ3 DNA-directed RNA polymerase I and III subunit RPAC1 n=1
Tax=Microsporum canis CBS 113480 RepID=C5FSZ3_NANOT
Length = 380
Score = 86.7 bits (213), Expect = 9e-16
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTIT--SANTFNAM--GVDNSWDFAAFKDSFQIVINKM 358
+PE ++ R+ + N T+T SA F + G +++W F + +I +K
Sbjct: 7 VPEEIQKRKI-------IGINPETVTNPSATDFPSHWPGENHAWSIDKFSEGLKIEFHKN 59
Query: 359 DREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
D F +IG D AIANA RRILIAE+PT+AIE+V++ NNTS+IQDEVL+HRL
Sbjct: 60 DPLEASFSLIGVDAAIANAFRRILIAEIPTLAIEYVYIQNNTSVIQDEVLAHRL 113
[93][TOP]
>UniRef100_C5DLD4 KLTH0F12056p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DLD4_LACTC
Length = 350
Score = 86.7 bits (213), Expect = 9e-16
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVDN--SWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F D +W+ FK++F + I +D FD++ D +IANA
Sbjct: 23 IEYNRVTNTTSTDFPGFEKDQDAAWNLERFKNTFDVNITSLDDREANFDLVNVDASIANA 82
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E+V+ NNTS+IQDEVL+HR+
Sbjct: 83 FRRIMIAEVPSVAAEYVYFFNNTSVIQDEVLAHRI 117
[94][TOP]
>UniRef100_UPI0000E468FB PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E468FB
Length = 335
Score = 86.3 bits (212), Expect = 1e-15
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +2
Query: 323 FKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDE 502
F+ +F+I + + +EFDM+G DPA+ANA RRIL+AEVPT+AIE V + NNTSIIQDE
Sbjct: 30 FEQNFRIDVISLTHSELEFDMVGVDPAVANAFRRILLAEVPTMAIEKVSIFNNTSIIQDE 89
Query: 503 VLSHRL 520
+L+HRL
Sbjct: 90 ILAHRL 95
[95][TOP]
>UniRef100_Q29L21 GA17664 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q29L21_DROPS
Length = 333
Score = 86.3 bits (212), Expect = 1e-15
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ ++ FK Q+ I + D + +EFDMIG PAIANA RR++++EVP++AIE V++ N
Sbjct: 29 DDVFNMEVFKKKLQVAIVRNDEDGLEFDMIGVYPAIANAFRRLMLSEVPSMAIEKVYIYN 88
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 89 NTSIIQDEVLAHRM 102
[96][TOP]
>UniRef100_A3GGP5 RNA polymerase III (C) subunit n=1 Tax=Pichia stipitis
RepID=A3GGP5_PICST
Length = 336
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T TS+ F + D +WD FKD F+I I+ FD+I D AIANA
Sbjct: 9 VEYNRVTNTSSTDFPGHQANGDYAWDIEKFKDKFEINISYKTDRTANFDLINIDTAIANA 68
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+I+EVP+VA E V+M NTS+IQDEVL+HR+
Sbjct: 69 FRRIMISEVPSVAAEAVYMFMNTSVIQDEVLAHRI 103
[97][TOP]
>UniRef100_Q4X0E8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus fumigatus RepID=Q4X0E8_ASPFU
Length = 374
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W+ FKD F++ ++ D F +IG D +IANA RRIL+AEVPT+AIE+VF+
Sbjct: 38 GESHEWNLEKFKDGFRVEFHRNDPFESSFSLIGLDASIANAFRRILMAEVPTLAIEYVFV 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 98 HNNTSVIQDEVLASRL 113
[98][TOP]
>UniRef100_B2WCA1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Pyrenophora tritici-repentis Pt-1C-BFP
RepID=B2WCA1_PYRTR
Length = 376
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANT----FNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
L T+T+ + F+ G ++ W+ F+D+F +V +K D +F + G D ++A
Sbjct: 15 LGIGPETVTNQQSTDFPFHWPGENHEWNLDYFRDNFNVVFHKNDPLDAQFSLTGIDTSVA 74
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRIL++E+PT+AIE V++ NTSIIQDEVL+HRL
Sbjct: 75 NAFRRILLSEIPTLAIEDVYIYQNTSIIQDEVLAHRL 111
[99][TOP]
>UniRef100_B0XTN4 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus fumigatus A1163 RepID=B0XTN4_ASPFC
Length = 414
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W+ FKD F++ ++ D F +IG D +IANA RRIL+AEVPT+AIE+VF+
Sbjct: 78 GESHEWNLEKFKDGFRVEFHRNDPFESSFSLIGLDASIANAFRRILMAEVPTLAIEYVFV 137
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 138 HNNTSVIQDEVLASRL 153
[100][TOP]
>UniRef100_B3N4C9 GG25034 n=1 Tax=Drosophila erecta RepID=B3N4C9_DROER
Length = 329
Score = 84.7 bits (208), Expect = 3e-15
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ + AFK+ I I K D + +EFD+IG PAIANA RR+++++VP++AIE V++ N
Sbjct: 25 DDVFSVEAFKEKLHIKIVKNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYN 84
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 85 NTSIIQDEVLAHRM 98
[101][TOP]
>UniRef100_UPI000023F302 hypothetical protein FG00365.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F302
Length = 381
Score = 84.3 bits (207), Expect = 4e-15
Identities = 36/76 (47%), Positives = 58/76 (76%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G DN + F+D+F + ++ D+ + F ++G D ++ANA RRIL++E+PT+A+E+V++
Sbjct: 45 GEDNEYTLDRFRDAFSVNFHQNDQFLSSFSLVGIDASLANAFRRILLSEIPTLAVENVYI 104
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+HRL
Sbjct: 105 ENNTSVIQDEVLAHRL 120
[102][TOP]
>UniRef100_B3MVL4 GF21532 n=1 Tax=Drosophila ananassae RepID=B3MVL4_DROAN
Length = 333
Score = 84.3 bits (207), Expect = 4e-15
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D ++ FK QI I + D + +EFD+IG PAIANA RR+++++VP++AIE V++ N
Sbjct: 29 DEVFNMEVFKSKLQIAIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYN 88
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 89 NTSIIQDEVLAHRM 102
[103][TOP]
>UniRef100_B8MRS0 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MRS0_TALSN
Length = 373
Score = 84.3 bits (207), Expect = 4e-15
Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+N N TIT+ + + G + W F+++F++ +K + F ++G D +IA
Sbjct: 17 ININAETITNIPSTDFPGHWPGESHEWSVENFQNNFRVDFHKNEPLDASFSLVGLDASIA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRILIAEVPT+A+E+V++INNTS+IQDEVL+ RL
Sbjct: 77 NAFRRILIAEVPTLAVEYVYIINNTSVIQDEVLASRL 113
[104][TOP]
>UniRef100_A7ECC0 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ECC0_SCLS1
Length = 387
Score = 84.3 bits (207), Expect = 4e-15
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 VNTITSANTFNAM-GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRIL 430
V ITS + N D+SWD F+++ QIV ++ + + F ++G D ++ANA RRIL
Sbjct: 34 VTNITSTDFPNHWPNEDHSWDKEKFRENLQIVFHQNEPLLSSFSLVGIDASVANAFRRIL 93
Query: 431 IAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IAE+PT+AIE+ F+ NNTS+IQDEVL RL
Sbjct: 94 IAEIPTLAIEYCFVKNNTSVIQDEVLCGRL 123
[105][TOP]
>UniRef100_A5DTC9 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5DTC9_LODEL
Length = 336
Score = 84.3 bits (207), Expect = 4e-15
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F + D SW+ FKDSF+I I + FD+I D +IANA
Sbjct: 9 IEYNRVTNTASTDFPGHQQHGDYSWNIEKFKDSFEIKITNIAERSATFDLIHVDTSIANA 68
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E V++ NTS+IQDEVL+HR+
Sbjct: 69 FRRIMIAEVPSVAAETVYLYMNTSVIQDEVLAHRI 103
[106][TOP]
>UniRef100_A1DHS7 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1DHS7_NEOFI
Length = 374
Score = 84.3 bits (207), Expect = 4e-15
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W+ F+D F++ ++ D F +IG D +IANA RRIL+AEVPT+AIE+VF+
Sbjct: 38 GESHEWNLETFRDGFRVEFHRNDPFESSFSLIGLDASIANAFRRILMAEVPTLAIEYVFV 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 98 HNNTSVIQDEVLASRL 113
[107][TOP]
>UniRef100_B4Q356 GD23312 n=1 Tax=Drosophila simulans RepID=B4Q356_DROSI
Length = 333
Score = 84.0 bits (206), Expect = 6e-15
Identities = 39/74 (52%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ + AFK+ I I + D + +EFD+IG PAIANA RR+++++VP++AIE V++ N
Sbjct: 29 DDVFSIQAFKEKLHIKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYN 88
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 89 NTSIIQDEVLAHRM 102
[108][TOP]
>UniRef100_B4NW96 GE11271 n=1 Tax=Drosophila yakuba RepID=B4NW96_DROYA
Length = 333
Score = 84.0 bits (206), Expect = 6e-15
Identities = 39/74 (52%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ + A+K+ I I K D + +EFD+IG PAIANA RR+++++VP++AIE V++ N
Sbjct: 29 DDVFSIQAYKEKLHIKIVKNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYN 88
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 89 NTSIIQDEVLAHRM 102
[109][TOP]
>UniRef100_B4N0H9 GK24584 n=1 Tax=Drosophila willistoni RepID=B4N0H9_DROWI
Length = 332
Score = 84.0 bits (206), Expect = 6e-15
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D ++ FK ++ I + D E +EFD+IG PAIANA RR++++EVP++AIE V++ N
Sbjct: 28 DEVFNIDIFKQKLKVTIVRNDEEGLEFDLIGVYPAIANAFRRLMLSEVPSMAIEKVYIYN 87
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 88 NTSIIQDEVLAHRM 101
[110][TOP]
>UniRef100_Q9VMX3 CG3756 n=1 Tax=Drosophila melanogaster RepID=Q9VMX3_DROME
Length = 333
Score = 83.6 bits (205), Expect = 8e-15
Identities = 39/74 (52%), Positives = 57/74 (77%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D+ + AFK+ I I + D + +EFD+IG PAIANA RR+++++VP++AIE V++ N
Sbjct: 29 DDVFSVQAFKEKLHIKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYN 88
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HR+
Sbjct: 89 NTSIIQDEVLAHRM 102
[111][TOP]
>UniRef100_B4JB45 GH11517 n=1 Tax=Drosophila grimshawi RepID=B4JB45_DROGR
Length = 333
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREV-MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMI 475
D ++ FK+ Q+VI + D E +EFD+IG PAIANA RR++++EVP++AIE V++
Sbjct: 28 DEVFNMEVFKNKLQVVIVRNDEENGLEFDLIGVYPAIANAFRRLMLSEVPSMAIEKVYIY 87
Query: 476 NNTSIIQDEVLSHRL 520
NNTSIIQDEVL+HR+
Sbjct: 88 NNTSIIQDEVLAHRM 102
[112][TOP]
>UniRef100_Q59ZF5 Putative uncharacterized protein RPC40 n=1 Tax=Candida albicans
RepID=Q59ZF5_CANAL
Length = 369
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F + D SWD FK+ F+I I + FD+I D +IANA
Sbjct: 42 IEYNRVTNTTSTDFPGHQQNGDYSWDIEKFKNKFEIKITNLSERTGTFDLIHIDTSIANA 101
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E V+M NTS+IQDEVL+ R+
Sbjct: 102 FRRIMIAEVPSVAAETVYMFMNTSVIQDEVLAQRI 136
[113][TOP]
>UniRef100_C8VNX6 DNA-directed RNA polymerase I and III subunit Rpc40, putative
(AFU_orthologue; AFUA_2G13720) n=2 Tax=Emericella
nidulans RepID=C8VNX6_EMENI
Length = 373
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKM 358
+P H EL R + +N N T+T+ + + G + W+ F+D F++ ++
Sbjct: 5 VPSHEELERRRI-----VNVNAETVTNIASTDFPGHWPGESHEWNLDKFRDGFRVDFHQN 59
Query: 359 DREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ F +IG D +IANA RRI++AEVPT+AIE V++ NNTS+IQDEVL+ RL
Sbjct: 60 KKFEASFSLIGLDASIANAFRRIVMAEVPTLAIEWVYIHNNTSVIQDEVLAQRL 113
[114][TOP]
>UniRef100_C5M6J2 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Candida tropicalis MYA-3404 RepID=C5M6J2_CANTT
Length = 337
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F + D +WD FK+ F+I I M FD+I D +I+NA
Sbjct: 9 IEYNRVTNTTSTDFPGHQQNGDYAWDIEKFKNKFEIKITNMGERTGTFDLIHIDTSISNA 68
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA+E V+M NTS+IQDEVL+ R+
Sbjct: 69 FRRIMIAEVPSVAVETVYMFMNTSVIQDEVLAQRI 103
[115][TOP]
>UniRef100_B6Q738 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6Q738_PENMQ
Length = 373
Score = 83.2 bits (204), Expect = 1e-14
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+N N TIT+ + + G + W F+++F++ +K + F ++G D ++A
Sbjct: 17 ININPETITNIPSTDFPGHWPGESHEWSIEKFQNNFRVDFHKNETYDASFSLVGLDASVA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRILIAEVPT+AIE V+++NNTS+IQDEVL+ RL
Sbjct: 77 NAFRRILIAEVPTLAIEFVYILNNTSVIQDEVLASRL 113
[116][TOP]
>UniRef100_B6GYD0 Pc12g12250 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6GYD0_PENCW
Length = 374
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKM 358
+P EL+R + + N T+T+ + + G + W FK+ FQ+ ++
Sbjct: 5 VPSQEELQRRRI-----IGINAETVTNIPSTDFPGHWPGESHGWALDEFKNKFQVEFHRN 59
Query: 359 DREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+R F +IG D A+ANA RRIL+AE+PT+AIE F+ NNTS+IQDEVL+ RL
Sbjct: 60 ERFEASFSLIGLDAAVANAFRRILMAEIPTIAIEDCFIHNNTSVIQDEVLASRL 113
[117][TOP]
>UniRef100_A2QD13 Complex: RCP40 of S. cerevisiae associates with RCP19 of S.
cerevisiae n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QD13_ASPNC
Length = 359
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W A FK+ +I ++ +R F +IG D +IANA RRIL+AEVP++AIE+VF+
Sbjct: 38 GESHEWSLAKFKNDLKIDFHRNERFESSFSLIGVDASIANAFRRILMAEVPSIAIEYVFV 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 98 HNNTSVIQDEVLAQRL 113
[118][TOP]
>UniRef100_Q8LD68 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q8LD68_ARATH
Length = 375
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTF-NAMGVDNSWDFAAFKDSFQIVINKMDRE 367
LP HL+ ++ V + + + + T+ ++ D++ F D+F++ + + +
Sbjct: 25 LPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNFKVDVVSLTKT 84
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D A ANA RRILIAEVP++AIE VF+ NTS+I DEVL+HR+
Sbjct: 85 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVFIAYNTSVIIDEVLAHRM 135
[119][TOP]
>UniRef100_B4LUA3 GJ24400 n=1 Tax=Drosophila virilis RepID=B4LUA3_DROVI
Length = 333
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREV-MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMI 475
D ++ FK Q+VI + D E +EFD+IG PAIANA RR++++EVP++AIE V++
Sbjct: 28 DEVFNMDVFKSKLQVVIVRNDEENGLEFDLIGVYPAIANAFRRLMLSEVPSMAIEKVYIY 87
Query: 476 NNTSIIQDEVLSHRL 520
NNTSIIQDEVL+HR+
Sbjct: 88 NNTSIIQDEVLAHRM 102
[120][TOP]
>UniRef100_B4KGY1 GI17014 n=1 Tax=Drosophila mojavensis RepID=B4KGY1_DROMO
Length = 333
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREV-MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMI 475
D ++ FK Q+VI + D E +EFD+IG PAIANA RR++++EVP++AIE V++
Sbjct: 28 DEVFNMDVFKSKLQVVIVRNDEEHGLEFDLIGVYPAIANAFRRLMLSEVPSMAIEKVYIY 87
Query: 476 NNTSIIQDEVLSHRL 520
NNTSIIQDEVL+HR+
Sbjct: 88 NNTSIIQDEVLAHRM 102
[121][TOP]
>UniRef100_C6HA00 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces
capsulatus H143 RepID=C6HA00_AJECH
Length = 380
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T+ ++ + G ++ W FK + +I+ +K + F ++G D AIA
Sbjct: 17 IGINAETVTNISSTDFPGHWPGENHEWSIDEFKRNLKIIYHKNEPYEASFSLVGVDAAIA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+IAE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 77 NAFRRIMIAEIPSLAIETVYIHNNTSVIQDEVLAHRL 113
[122][TOP]
>UniRef100_C4R920 RNA polymerase subunit, common to RNA polymerase I and III n=1
Tax=Pichia pastoris GS115 RepID=C4R920_PICPG
Length = 335
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/97 (40%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVDNS----WDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+N + +T+ ++ + G D++ WD FKD+ +I + + FD+I D +IA
Sbjct: 5 VNIEKDRVTNVSSTDFPGYDSNTDYAWDLQKFKDTLEIKVGYRTDRTLNFDLIHIDTSIA 64
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+I+EVP+V++EHV++ NN+S+IQDEVL+ R+
Sbjct: 65 NAFRRIMISEVPSVSVEHVYINNNSSVIQDEVLASRI 101
[123][TOP]
>UniRef100_A4R0T4 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4R0T4_MAGGR
Length = 373
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = +2
Query: 257 NTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIA 436
NTI++ G +++WD F I ++ D + F +IG D +IANA RRI+IA
Sbjct: 27 NTISTDYPGAHYGEEHAWDVNEFSQHLNIQFHQNDPSLASFSLIGVDASIANAFRRIMIA 86
Query: 437 EVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E+P++AIE VF+ NNTS+IQDEVL+ RL
Sbjct: 87 EIPSLAIERVFITNNTSVIQDEVLAQRL 114
[124][TOP]
>UniRef100_B9WBJ1 DNA-directed RNA polymerases I and III subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9WBJ1_CANDC
Length = 336
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F + D +WD FK++F+I I + FD+I D +IANA
Sbjct: 9 IEYNRVTNTTSTDFPGHQQNGDYAWDIEKFKNNFEIKITNLSERTGTFDLIHIDTSIANA 68
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E V+M NTS+IQDEVL+ R+
Sbjct: 69 FRRIMIAEVPSVAAETVYMFMNTSVIQDEVLAQRI 103
[125][TOP]
>UniRef100_C5GBG6 DNA-directed RNA polymerase I and III polypeptide n=2
Tax=Ajellomyces dermatitidis RepID=C5GBG6_AJEDR
Length = 380
Score = 82.0 bits (201), Expect = 2e-14
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T+ ++ + G ++ W FK + ++ +K + F ++G D AIA
Sbjct: 17 IGINAETVTNISSTDFPGHWPGENHEWSIDVFKRNLKVTFHKNEPYEASFSLVGVDAAIA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+IAE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 77 NAFRRIMIAEIPSLAIETVYIHNNTSVIQDEVLAHRL 113
[126][TOP]
>UniRef100_C4YIK8 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Candida albicans RepID=C4YIK8_CANAL
Length = 336
Score = 82.0 bits (201), Expect = 2e-14
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Frame = +2
Query: 242 LNFNVNTITSANTF--NAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANA 415
+ +N T T++ F + D +WD FK+ F+I I + FD+I D +IANA
Sbjct: 9 IEYNRVTNTTSTDFPGHQQNGDYAWDIEKFKNKFEIKITNLSERTGTFDLIHIDTSIANA 68
Query: 416 LRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E V+M NTS+IQDEVL+ R+
Sbjct: 69 FRRIMIAEVPSVAAETVYMFMNTSVIQDEVLAQRI 103
[127][TOP]
>UniRef100_C0NBQ0 DNA-directed RNA polymerase I and III polypeptide n=1
Tax=Ajellomyces capsulatus G186AR RepID=C0NBQ0_AJECG
Length = 380
Score = 82.0 bits (201), Expect = 2e-14
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T+ ++ + G ++ W FK + +I +K + F ++G D AIA
Sbjct: 17 IGINAETVTNISSTDFPGHWPGENHEWSIDEFKRNLKITFHKNEPYEASFSLVGVDAAIA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+IAE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 77 NAFRRIMIAEIPSLAIETVYIHNNTSVIQDEVLAHRL 113
[128][TOP]
>UniRef100_B0CTH8 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CTH8_LACBS
Length = 353
Score = 82.0 bits (201), Expect = 2e-14
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DN W FK + ++ + ++ ++FD++G D +IANA RRI+IAEVPTV IE+V++ +
Sbjct: 32 DNEWSLEKFKKNLKVKVQRLSNLSIDFDLVGVDASIANAFRRIMIAEVPTVCIENVYVWD 91
Query: 479 NTSIIQDEVLSHRL 520
NTS++ DEVLS RL
Sbjct: 92 NTSVVVDEVLSQRL 105
[129][TOP]
>UniRef100_A7TPZ5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TPZ5_VANPO
Length = 320
Score = 82.0 bits (201), Expect = 2e-14
Identities = 36/74 (48%), Positives = 56/74 (75%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DN WD F+++ +I I+K+ D+I D +IANALRRI+I+EVP+VA E+++++N
Sbjct: 14 DNIWDANKFRENLEINISKVGERETNLDLINVDTSIANALRRIMISEVPSVAAEYIYILN 73
Query: 479 NTSIIQDEVLSHRL 520
NTS+IQDEV++ R+
Sbjct: 74 NTSVIQDEVIAQRI 87
[130][TOP]
>UniRef100_Q75A87 ADR031Cp n=1 Tax=Eremothecium gossypii RepID=Q75A87_ASHGO
Length = 364
Score = 81.6 bits (200), Expect = 3e-14
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGVDN----SWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+N N +T+ + + G + +WD F+ + + I +D FD++ D +IA
Sbjct: 35 VNIEYNRVTNTTSTDFPGFSHQKECAWDVDEFRRTMDVQIKSLDEREANFDLLRVDTSIA 94
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+I+EVP+VA E+V+ NNTS+IQDEVL+HR+
Sbjct: 95 NAFRRIMISEVPSVAPEYVYFFNNTSVIQDEVLAHRI 131
[131][TOP]
>UniRef100_Q0UUA6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UUA6_PHANO
Length = 350
Score = 81.6 bits (200), Expect = 3e-14
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
++ WD FKD+F++ + F + G D ++ANA RRIL+AE+PT+AIE VF+
Sbjct: 14 NHEWDLDYFKDNFKVKFHTHSPHDTSFSLTGIDTSVANAFRRILLAEIPTLAIEDVFIYQ 73
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQDEVL+HRL
Sbjct: 74 NTSIIQDEVLAHRL 87
[132][TOP]
>UniRef100_C4XY85 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4XY85_CLAL4
Length = 333
Score = 81.6 bits (200), Expect = 3e-14
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMGV-DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANAL 418
+ +N T TS+ F D++WD FK +F I I + FD+ D +IANA
Sbjct: 7 IEYNRVTNTSSTDFPGHSAEDHAWDIEKFKRTFDIDIKYIAGRNANFDLRHIDTSIANAF 66
Query: 419 RRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
RRI+IAEVP+VA E V++ NNTS+IQDEVL+HR+
Sbjct: 67 RRIMIAEVPSVAAETVYVFNNTSVIQDEVLAHRI 100
[133][TOP]
>UniRef100_A6R4R6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Ajellomyces capsulatus NAm1 RepID=A6R4R6_AJECN
Length = 380
Score = 81.6 bits (200), Expect = 3e-14
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T+ ++ + G ++ W FK + ++ +K + F ++G D AIA
Sbjct: 17 IGINAETVTNISSTDFPGHWPGENHEWSIDEFKRNLKVTFHKNEPYEASFSLVGVDAAIA 76
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRI+IAE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 77 NAFRRIMIAEIPSLAIETVYIHNNTSVIQDEVLAHRL 113
[134][TOP]
>UniRef100_UPI0000DB7696 PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Apis mellifera
RepID=UPI0000DB7696
Length = 347
Score = 81.3 bits (199), Expect = 4e-14
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +2
Query: 263 ITSANTFNAMGVDNSWDFAAFKDSFQIVINKM--DREVMEFDMIGCDPAIANALRRILIA 436
I +A+ + W+ + FK F+I + + D +EFD+IG ANA RR+L++
Sbjct: 16 IPNASEYTHYQSQQDWNLSNFKKEFKIQVMRESEDTRELEFDLIGYPVGFANAFRRVLLS 75
Query: 437 EVPTVAIEHVFMINNTSIIQDEVLSHRL 520
EVPT+AIE V+++NNTS+IQDEVL+HRL
Sbjct: 76 EVPTMAIEKVYIVNNTSLIQDEVLAHRL 103
[135][TOP]
>UniRef100_Q5TY08 AGAP012796-PA (Fragment) n=1 Tax=Anopheles gambiae str. PEST
RepID=Q5TY08_ANOGA
Length = 234
Score = 81.3 bits (199), Expect = 4e-14
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
D WDF +FK QIV+ + D +EFDMIG AIAN RR++++EVP++AIE V + N
Sbjct: 29 DELWDFESFKRKLQIVVVRYDENELEFDMIGVT-AIANVFRRLMLSEVPSMAIEKVHIYN 87
Query: 479 NTSIIQDEVLSHRL 520
NTSIIQD L+HRL
Sbjct: 88 NTSIIQDGGLAHRL 101
[136][TOP]
>UniRef100_UPI0000D9AD00 PREDICTED: RNA polymerase I subunit n=1 Tax=Macaca mulatta
RepID=UPI0000D9AD00
Length = 291
Score = 80.9 bits (198), Expect = 5e-14
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 356 MDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MD +EFDM+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 1 MDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 55
[137][TOP]
>UniRef100_Q2HPH1 RNA polymerase subunit I (Fragment) n=1 Tax=Bos taurus
RepID=Q2HPH1_BOVIN
Length = 250
Score = 80.9 bits (198), Expect = 5e-14
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 356 MDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MD +EFDM+G D AIANA RRIL+AEVPT+A+E V + NNTSI+QDE+L+HRL
Sbjct: 3 MDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL 57
[138][TOP]
>UniRef100_C7YHM9 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHM9_NECH7
Length = 381
Score = 80.9 bits (198), Expect = 5e-14
Identities = 35/76 (46%), Positives = 57/76 (75%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G D ++ F++ F + ++ D+ + F ++G D ++ANA RRIL+AE+PT+A+E+V++
Sbjct: 45 GEDAAFTIERFREGFSVGFHQNDQFLSSFSLVGIDASLANAFRRILLAEIPTLAVENVYI 104
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+HRL
Sbjct: 105 ENNTSVIQDEVLAHRL 120
[139][TOP]
>UniRef100_Q9C6C2 RNA polymerase subunit; 10595-12672 n=1 Tax=Arabidopsis thaliana
RepID=Q9C6C2_ARATH
Length = 375
Score = 80.5 bits (197), Expect = 6e-14
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTF-NAMGVDNSWDFAAFKDSFQIVINKMDRE 367
LP HL+ ++ V + + + + T+ ++ D++ F D+F++ + + +
Sbjct: 25 LPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNFKVDVVSLTKT 84
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D A ANA RRILIAEVP++AIE V + NTS+I DEVL+HR+
Sbjct: 85 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHRM 135
[140][TOP]
>UniRef100_Q3ECL4 Putative uncharacterized protein At1g60850.3 n=1 Tax=Arabidopsis
thaliana RepID=Q3ECL4_ARATH
Length = 302
Score = 80.5 bits (197), Expect = 6e-14
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTF-NAMGVDNSWDFAAFKDSFQIVINKMDRE 367
LP HL+ ++ V + + + + T+ ++ D++ F D+F++ + + +
Sbjct: 25 LPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNFKVDVVSLTKT 84
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D A ANA RRILIAEVP++AIE V + NTS+I DEVL+HR+
Sbjct: 85 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHRM 135
[141][TOP]
>UniRef100_Q39215 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q39215_ARATH
Length = 375
Score = 80.5 bits (197), Expect = 6e-14
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 191 LPEHLELRRDFVTCGDRLNFNVNTITSANTF-NAMGVDNSWDFAAFKDSFQIVINKMDRE 367
LP HL+ ++ V + + + + T+ ++ D++ F D+F++ + + +
Sbjct: 25 LPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNFKVDVVSLTKT 84
Query: 368 VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
MEFDMIG D A ANA RRILIAEVP++AIE V + NTS+I DEVL+HR+
Sbjct: 85 DMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHRM 135
[142][TOP]
>UniRef100_Q7PPN8 AGAP008771-PA (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7PPN8_ANOGA
Length = 261
Score = 80.5 bits (197), Expect = 6e-14
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +2
Query: 320 AFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQD 499
+FK QIV+ + D +EFDMIG AIAN RR++++EVP++AIE V + NNTSIIQD
Sbjct: 1 SFKRKLQIVVVRYDENELEFDMIGVSCAIANVFRRLMLSEVPSMAIEKVHIYNNTSIIQD 60
Query: 500 EVLSHRL 520
EVL+HRL
Sbjct: 61 EVLAHRL 67
[143][TOP]
>UniRef100_B8NHK8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=2
Tax=Aspergillus RepID=B8NHK8_ASPFN
Length = 373
Score = 80.5 bits (197), Expect = 6e-14
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W+ F++ F + ++ +R F +IG D +IANA RRI++AEVP+VAIE VF+
Sbjct: 38 GESHEWNLEKFRNEFNVEFHRNERFESSFSLIGVDASIANAFRRIVMAEVPSVAIEFVFV 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 98 HNNTSVIQDEVLAQRL 113
[144][TOP]
>UniRef100_A9V9D0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9D0_MONBE
Length = 363
Score = 80.1 bits (196), Expect = 8e-14
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREV--MEFDMIGCDPAIANALRRILIAEVPTVAIEHV 466
G+D+SW+ A K +I + +++ +EFD+IG D AI N +RRILIA+ PT+AIE V
Sbjct: 33 GIDDSWNLEAIKKKLKIDVTRIEDSEYELEFDIIGLDAAIVNTIRRILIADTPTMAIESV 92
Query: 467 FMINNTSIIQDEVLSHRL 520
++ NNTS++ DE+ +HRL
Sbjct: 93 YIFNNTSMLPDELFAHRL 110
[145][TOP]
>UniRef100_Q0CY78 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0CY78_ASPTN
Length = 374
Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G + W F++ F++ ++ F ++G D AIANA RRIL+AEVPT+AIE+VF+
Sbjct: 38 GESHEWSLDKFRNDFKVEFHRNAPFEASFSLVGLDAAIANAFRRILMAEVPTLAIEYVFV 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+ RL
Sbjct: 98 HNNTSVIQDEVLAQRL 113
[146][TOP]
>UniRef100_C1H4P1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb01
RepID=C1H4P1_PARBA
Length = 380
Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G ++ W F+++ + +K + F +IG D +IANA RRILIAE+P++AIE V++
Sbjct: 38 GENHEWSIEKFRNNLIVTFHKNEPYEASFSLIGVDASIANAFRRILIAEIPSLAIETVYI 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+HRL
Sbjct: 98 HNNTSVIQDEVLAHRL 113
[147][TOP]
>UniRef100_C4PY29 DNA-directed RNA polymerase I, putative n=1 Tax=Schistosoma mansoni
RepID=C4PY29_SCHMA
Length = 490
Score = 79.0 bits (193), Expect = 2e-13
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDRE--VMEFDMIGCDPAIANALRRILIAEVPTVAIEHV 466
GV++ W + FK F + I + E MEFDMI D + ANA+RRIL++EVP++AIE V
Sbjct: 22 GVEDRWSLSVFKKKFHVEIIRHGEESDTMEFDMINLDCSFANAVRRILVSEVPSLAIERV 81
Query: 467 FMINNTSIIQDEVLSHRL 520
++ NTSI+ DEV+ HRL
Sbjct: 82 YVSQNTSIMPDEVMCHRL 99
[148][TOP]
>UniRef100_Q235X0 DNA-directed RNA polymerase I 40 kDa polypeptide n=1
Tax=Tetrahymena thermophila SB210 RepID=Q235X0_TETTH
Length = 336
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/72 (55%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +2
Query: 311 DFAAFKDSFQIVINKMDRE--VMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNT 484
DF FK++ +I + + D + +EFD++G D IANALRRI+IAEVPT+AI V++ NT
Sbjct: 36 DFNTFKENIKIEVIRYDNKNKELEFDLMGVDAPIANALRRIMIAEVPTMAIHKVYIYQNT 95
Query: 485 SIIQDEVLSHRL 520
SII DEVL+HRL
Sbjct: 96 SIIPDEVLAHRL 107
[149][TOP]
>UniRef100_A6RP60 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RP60_BOTFB
Length = 389
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Frame = +2
Query: 242 LNFNVNTITSANTFNAMG----VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIA 409
+ N T+T + + G +++W+ +F ++ QI ++ + + F +IG D ++A
Sbjct: 29 VGINTETVTDITSTDFPGHWPNEEHAWNKQSFAENLQIQFHQNEPLLSSFSLIGIDASVA 88
Query: 410 NALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
NA RRILIAE+PT+AIE+ F+ NNTS+IQDEVL RL
Sbjct: 89 NAFRRILIAEIPTLAIEYCFVKNNTSVIQDEVLCARL 125
[150][TOP]
>UniRef100_C1GK69 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb18
RepID=C1GK69_PARBD
Length = 380
Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +2
Query: 293 GVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFM 472
G ++ W F+++ + +K + F +IG D +IANA RRILI+E+P++AIE V++
Sbjct: 38 GENHEWSIEKFRNNLIVTFHKNEPYEASFSLIGVDASIANAFRRILISEIPSLAIETVYI 97
Query: 473 INNTSIIQDEVLSHRL 520
NNTS+IQDEVL+HRL
Sbjct: 98 HNNTSVIQDEVLAHRL 113
[151][TOP]
>UniRef100_C4JJM6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JJM6_UNCRE
Length = 378
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = +2
Query: 332 SFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLS 511
+ Q++ +K D F +IG D AIANA RRILIAE+P++AIE VF+ NNTS+I DEVLS
Sbjct: 47 NLQVIFHKNDPLEASFSLIGVDAAIANAFRRILIAEIPSLAIEFVFIHNNTSVIHDEVLS 106
Query: 512 HRL 520
HRL
Sbjct: 107 HRL 109
[152][TOP]
>UniRef100_A8P6Y5 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein
n=1 Tax=Brugia malayi RepID=A8P6Y5_BRUMA
Length = 339
Score = 77.0 bits (188), Expect = 7e-13
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = +2
Query: 308 WDFAAFKDSFQIVI--NKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINN 481
WD A+ +I I D +EFD++G + IANA+RRILIAE+PT+AIE V++ N
Sbjct: 44 WDVTAYISEIKIFIVNESKDGMTLEFDLVGVEAPIANAIRRILIAELPTLAIEKVYLYQN 103
Query: 482 TSIIQDEVLSHR 517
TSII DEVLSHR
Sbjct: 104 TSIIPDEVLSHR 115
[153][TOP]
>UniRef100_Q8IHT3 DNA-directed RNA polymerase I, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8IHT3_PLAF7
Length = 333
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +2
Query: 197 EHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVME 376
E+++ R +FV G+ N T ++ +N +D F+++ ++ + K + ++
Sbjct: 2 ENVKYRDNFVQLGEEGPRNATTTNFYGSYYFSDKENYFDIRKFEENLEMNVIKNEENILI 61
Query: 377 FDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ D +IANALRRI+++EVPT+AIE V M NT II DE+L HRL
Sbjct: 62 LEIKNMDVSIANALRRIMLSEVPTIAIEKVNMYQNTGIIADEILCHRL 109
[154][TOP]
>UniRef100_B6AC64 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AC64_9CRYT
Length = 351
Score = 75.9 bits (185), Expect = 2e-12
Identities = 42/87 (48%), Positives = 54/87 (62%)
Frame = +2
Query: 260 TITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAE 439
T NT M V+N K IN++ + + FD+IG D A+ANALRRIL+ E
Sbjct: 45 TADRKNTIKPMTVENILKLIDIK------INELTSDYINFDLIGVDAAVANALRRILLVE 98
Query: 440 VPTVAIEHVFMINNTSIIQDEVLSHRL 520
VPTVAIE V + N+ +IQDEVL+HRL
Sbjct: 99 VPTVAIETVQIYQNSGVIQDEVLAHRL 125
[155][TOP]
>UniRef100_C4V751 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4V751_NOSCE
Length = 293
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/69 (50%), Positives = 52/69 (75%)
Frame = +2
Query: 314 FAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSII 493
F ++ ++ I K + V+EFD++G D ++ANALRRILI E+PT AIE+VF+ +NTS++
Sbjct: 23 FNEMMENIKLDIIKKEHLVLEFDLVGVDCSVANALRRILINEIPTFAIENVFIFDNTSVL 82
Query: 494 QDEVLSHRL 520
DE L+HRL
Sbjct: 83 PDEFLAHRL 91
[156][TOP]
>UniRef100_B8CCH8 Dna-directed RNA polymerase I 40kDa polypeptide, rpo1-1-like
protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CCH8_THAPS
Length = 351
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/59 (55%), Positives = 48/59 (81%)
Frame = +2
Query: 344 VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
V+ + + + F+++G D + ANALRRI+IAE+PT+A+EHV+M NN+S+I DEVLSHRL
Sbjct: 48 VLERPSKNELVFEVVGVDVSFANALRRIMIAEIPTMALEHVYMWNNSSLIHDEVLSHRL 106
[157][TOP]
>UniRef100_C5L9Q7 DNA-directed RNA polymerase I, putative n=1 Tax=Perkinsus marinus
ATCC 50983 RepID=C5L9Q7_9ALVE
Length = 310
Score = 73.9 bits (180), Expect = 6e-12
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = +2
Query: 347 INKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + EV+E D++G DP IANALRRI+IAE+PT+AIE ++ NT +I DE+L+HRL
Sbjct: 3 VQRASDEVVEVDVVGIDPPIANALRRIMIAEIPTIAIEKCYVYQNTGVIHDEILAHRL 60
[158][TOP]
>UniRef100_Q9UAY9 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans
RepID=Q9UAY9_CAEEL
Length = 366
Score = 71.2 bits (173), Expect = 4e-11
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 VNTITSANTFNAMGVDNSWDFAAFKDSFQI-VINKMDREV-MEFDMIGCDPAIANALRRI 427
+NT + +D + D Q+ ++N+ D + +EFD+ + IANALRR+
Sbjct: 27 LNTYDECTDYVEYDDTKQFDINEYCDQIQVAMVNESDDGMTLEFDITRIEAPIANALRRV 86
Query: 428 LIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
LIAEVPT+A+E +++ NTS+IQDEVL HRL
Sbjct: 87 LIAEVPTMALEKIYLYQNTSVIQDEVLCHRL 117
[159][TOP]
>UniRef100_UPI00002223F9 Hypothetical protein CBG01436 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI00002223F9
Length = 367
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+V D+ +EFD+ + IANALRRILIAEVPT+A+E +++ NTS+IQDEVL HRL
Sbjct: 59 MVNESTDKMTLEFDITRIEAPIANALRRILIAEVPTMALEKIYLYQNTSVIQDEVLCHRL 118
[160][TOP]
>UniRef100_Q5CPY6 RNA polymerase III C5 subunit n=1 Tax=Cryptosporidium parvum Iowa
II RepID=Q5CPY6_CRYPV
Length = 344
Score = 70.9 bits (172), Expect = 5e-11
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 329 DSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVL 508
++ I +N++ + + FD+ G D +IANALRRIL+ E+PTVAIE V + N +IQDEVL
Sbjct: 53 ETIDIKVNELKSDYINFDISGIDASIANALRRILLVEIPTVAIETVQIYQNNGVIQDEVL 112
Query: 509 SHRL 520
+HRL
Sbjct: 113 AHRL 116
[161][TOP]
>UniRef100_Q5CJZ9 DNA-directed RNA polymerase I n=1 Tax=Cryptosporidium hominis
RepID=Q5CJZ9_CRYHO
Length = 344
Score = 70.9 bits (172), Expect = 5e-11
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 329 DSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVL 508
++ I +N++ + + FD+ G D +IANALRRIL+ E+PTVAIE V + N +IQDEVL
Sbjct: 53 ETIDIKVNELKSDYINFDISGIDASIANALRRILLVEIPTVAIETVQIYQNNGVIQDEVL 112
Query: 509 SHRL 520
+HRL
Sbjct: 113 AHRL 116
[162][TOP]
>UniRef100_A8WQE9 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae
RepID=A8WQE9_CAEBR
Length = 698
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+V D+ +EFD+ + IANALRRILIAEVPT+A+E +++ NTS+IQDEVL HRL
Sbjct: 390 MVNESTDKMTLEFDITRIEAPIANALRRILIAEVPTMALEKIYLYQNTSVIQDEVLCHRL 449
[163][TOP]
>UniRef100_C0SF50 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb03
RepID=C0SF50_PARBP
Length = 345
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ +K + F +IG D +IANA RRILIAE+P++AIE V++ NNTS+IQDEVL+HRL
Sbjct: 19 VTFHKNEPYEASFSLIGVDASIANAFRRILIAEIPSLAIETVYIHNNTSVIQDEVLAHRL 78
[164][TOP]
>UniRef100_UPI00017936CF PREDICTED: similar to DNA-directed RNA polymerase n=1
Tax=Acyrthosiphon pisum RepID=UPI00017936CF
Length = 325
Score = 70.5 bits (171), Expect = 7e-11
Identities = 34/72 (47%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +2
Query: 308 WDFAAFKDSFQI-VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNT 484
+++ F +F+I +I++ D + +EFD++G D A+AN+LRR++I+EVP++AIE V + NT
Sbjct: 23 YNYDEFVKNFKINIISRSDND-LEFDLVGIDVAVANSLRRVIISEVPSMAIEKVHIYQNT 81
Query: 485 SIIQDEVLSHRL 520
S I DE+L+HRL
Sbjct: 82 SYILDEILAHRL 93
[165][TOP]
>UniRef100_Q4YX04 DNA-directed RNA polymerase I, putative n=1 Tax=Plasmodium berghei
RepID=Q4YX04_PLABE
Length = 334
Score = 70.5 bits (171), Expect = 7e-11
Identities = 37/107 (34%), Positives = 63/107 (58%)
Frame = +2
Query: 200 HLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEF 379
+++ + FV G NV T ++ +N +D F+++ ++ I K + ++
Sbjct: 3 NIKYKDQFVKMGQEGPRNVTTTNFYGSYFLTENENFFDIKKFEENLEMKIIKNEENLLIL 62
Query: 380 DMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ + +IANALRRI+I+EVPT+AIE V + NT +I DE+L HRL
Sbjct: 63 EIKNLNVSIANALRRIMISEVPTIAIEKVNIFQNTGVIADEILCHRL 109
[166][TOP]
>UniRef100_C6LSX9 DNA-directed RNA polymerase subunit D n=1 Tax=Giardia intestinalis
ATCC 50581 RepID=C6LSX9_GIALA
Length = 350
Score = 70.5 bits (171), Expect = 7e-11
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 311 DFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSI 490
D +AF+ + +I K + ++ FD+I P IAN +RRI++ EVPT+AI+ V + N+SI
Sbjct: 23 DLSAFQSRLEYIIQKDEYDLFSFDVINLSPVIANTIRRIILDEVPTIAIDTVVVHENSSI 82
Query: 491 IQDEVLSHRL 520
I DE+ SHRL
Sbjct: 83 IADEIFSHRL 92
[167][TOP]
>UniRef100_Q3LWA1 DNA-directed RNA polymerase I 40kDa subunit n=1 Tax=Bigelowiella
natans RepID=Q3LWA1_BIGNA
Length = 293
Score = 68.2 bits (165), Expect = 3e-10
Identities = 27/71 (38%), Positives = 49/71 (69%)
Frame = +2
Query: 308 WDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTS 487
W+ ++ FQ + ++ ME +++G D +I NA+RRIL++E+ T+AIE +++ NTS
Sbjct: 19 WEIHIVEEGFQFKVLVLNNFFMEIEIVGLDSSIINAMRRILLSEIATIAIEDIYVFENTS 78
Query: 488 IIQDEVLSHRL 520
I+ D +L+HR+
Sbjct: 79 ILNDNILAHRI 89
[168][TOP]
>UniRef100_Q4XZH2 DNA-directed RNA polymerase I, putative (Fragment) n=1
Tax=Plasmodium chabaudi RepID=Q4XZH2_PLACH
Length = 297
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/106 (33%), Positives = 61/106 (57%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
++ + FV G N T ++ +N +D F+++ ++ I K + ++ +
Sbjct: 4 IKYKDQFVKMGQEGPRNATTTNFYGSYFLTENENFFDINKFEENLEMKIIKNEENLLILE 63
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +IANALRRI+I+EVPT+AIE V + NT +I DE+L HRL
Sbjct: 64 IKNLNVSIANALRRIMISEVPTIAIEKVNIFQNTGVIADEILCHRL 109
[169][TOP]
>UniRef100_Q4XH79 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4XH79_PLACH
Length = 126
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/106 (33%), Positives = 61/106 (57%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
++ + FV G N T ++ +N +D F+++ ++ I K + ++ +
Sbjct: 4 IKYKDQFVKMGQEGPRNATTTNFYGSYFLTENENFFDINKFEENLEMKIIKNEENLLILE 63
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +IANALRRI+I+EVPT+AIE V + NT +I DE+L HRL
Sbjct: 64 IKNLNVSIANALRRIMISEVPTIAIEKVNIFQNTGVIADEILCHRL 109
[170][TOP]
>UniRef100_A8B9C8 DNA-directed RNA polymerase subunit D n=1 Tax=Giardia lamblia ATCC
50803 RepID=A8B9C8_GIALA
Length = 350
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +2
Query: 311 DFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSI 490
D +AF++ + VI K + + FD+I P IAN +RRI++ EVPT+AI+ V + N+SI
Sbjct: 23 DLSAFQNRLEYVIWKDECDTFSFDVINLSPVIANTIRRIILDEVPTMAIDTVVVHENSSI 82
Query: 491 IQDEVLSHRL 520
I DE+ SHRL
Sbjct: 83 IADEIFSHRL 92
[171][TOP]
>UniRef100_B6KLD3 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=2
Tax=Toxoplasma gondii RepID=B6KLD3_TOXGO
Length = 346
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +2
Query: 296 VDNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMI 475
VD+ + F + + + E + F++ G D AI NALRRILI+EVPTVAIE V +
Sbjct: 46 VDDVFSIDKFCERTSLKFLSVSPERVVFELKGVDAAIPNALRRILISEVPTVAIETVQIW 105
Query: 476 NNTSIIQDEVLSHRL 520
NT ++QDEVL+HRL
Sbjct: 106 QNTGVVQDEVLAHRL 120
[172][TOP]
>UniRef100_A0D420 Chromosome undetermined scaffold_37, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0D420_PARTE
Length = 316
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = +2
Query: 344 VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+++K D +++ F++I D IAN+LRRI+IAE+PT+AI V +I NTS+I DEVL+HRL
Sbjct: 35 ILSKTDEKIV-FEIINIDAPIANSLRRIMIAEIPTMAIHKVQVIQNTSVIPDEVLAHRL 92
[173][TOP]
>UniRef100_A0D2I2 Chromosome undetermined scaffold_35, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0D2I2_PARTE
Length = 316
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = +2
Query: 344 VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+++K D +++ F++I D IAN+LRRI+IAE+PT+AI V +I NTS+I DEVL+HRL
Sbjct: 35 ILSKTDEKIV-FEIINIDAPIANSLRRIMIAEIPTMAIHKVQVIQNTSVIPDEVLAHRL 92
[174][TOP]
>UniRef100_B3L5N8 DNA-diDNA-directed RNA polymerase I, putative n=1 Tax=Plasmodium
knowlesi strain H RepID=B3L5N8_PLAKH
Length = 333
Score = 65.9 bits (159), Expect = 2e-09
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
++ R +FV + N T ++ ++ +D F+ + ++ ++K + ++ +
Sbjct: 4 VKFRDNFVKLKEEGPRNATTTNFYGSYFLSENEHMFDINEFEKNLEMKMHKNEENLLILE 63
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +IANALRRI++AEVPT+AIE V + NT II DE+L HRL
Sbjct: 64 VKNLNVSIANALRRIMLAEVPTIAIEKVNIFQNTGIIADEILCHRL 109
[175][TOP]
>UniRef100_Q8SSL9 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SSL9_ENCCU
Length = 305
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 329 DSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVL 508
D +I I + E +EFD+I D +IANALRRIL +EVPT+A+ +F+ N S+ DE +
Sbjct: 28 DEIEIRITEYSSEKLEFDLINVDCSIANALRRILSSEVPTMAVRDIFLKENESVFPDEFI 87
Query: 509 SHRL 520
+HRL
Sbjct: 88 AHRL 91
[176][TOP]
>UniRef100_A5K591 DNA-directed RNA polymerase I, putative n=1 Tax=Plasmodium vivax
RepID=A5K591_PLAVI
Length = 333
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/106 (33%), Positives = 62/106 (58%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
++ R +FV + N T ++ ++ +D F+ + ++ ++K + ++ +
Sbjct: 4 VKFRDNFVKLKEEGPRNATTTNFYGSYFLSENEHLFDINEFEKNLEMKMHKNEENLLILE 63
Query: 383 MIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +IANALRRI++AEVPT+AIE V + NT II DE+L HRL
Sbjct: 64 VKNLNVSIANALRRIMLAEVPTIAIEKVNIFQNTGIIADEILCHRL 109
[177][TOP]
>UniRef100_C1EBY2 Dna-directed RNA polymerase II polypeptide a n=1 Tax=Micromonas sp.
RCC299 RepID=C1EBY2_9CHLO
Length = 331
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IV+ +M + ++F + G D +IANALRR++IAEVPT+AI+ V +I N+S + DE ++HRL
Sbjct: 15 IVVQEMTEDTIKFVLTGTDTSIANALRRVIIAEVPTIAIDLVEVIENSSCLCDEFIAHRL 74
[178][TOP]
>UniRef100_Q4N473 DNA-directed RNA polymerase I, putative n=1 Tax=Theileria parva
RepID=Q4N473_THEPA
Length = 303
Score = 64.3 bits (155), Expect = 5e-09
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +2
Query: 299 DNSWDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMIN 478
DN+ + Q+ K E +++G D ++ANALRRILI+EVPT+A+E V +
Sbjct: 21 DNNIPILEKVKNLQVKFLKKTPEFSVVEIVGLDVSLANALRRILISEVPTLAVETVQIYQ 80
Query: 479 NTSIIQDEVLSHRL 520
NT +IQDE+L+HRL
Sbjct: 81 NTGVIQDELLAHRL 94
[179][TOP]
>UniRef100_A2SSV7 DNA-directed RNA polymerase, subunit D n=1 Tax=Methanocorpusculum
labreanum Z RepID=A2SSV7_METLZ
Length = 275
Score = 64.3 bits (155), Expect = 5e-09
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+V +++D V F + G PA ANALRR +I EVPT+AIE + + +NTS++ DE+L+HRL
Sbjct: 3 LVFSRLDDSVARFTIHGATPAFANALRRSMIGEVPTLAIEDIRIYDNTSVLFDEMLAHRL 62
[180][TOP]
>UniRef100_C8TDY9 Rna polymerase ii b3 subunit n=1 Tax=Eimeria tenella
RepID=C8TDY9_EIMTE
Length = 147
Score = 63.9 bits (154), Expect = 6e-09
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I + ++ +V+ F + CD +IANALRR++I+EVPT+AI+ V + NTS++ DE + HRL
Sbjct: 44 IRVTELSNKVVRFTLSNCDASIANALRRVMISEVPTLAIDLVTVFENTSVLHDEYIVHRL 103
[181][TOP]
>UniRef100_A8ICX5 DNA-directed RNA polymerase II, 36 kDa polypeptide (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8ICX5_CHLRE
Length = 275
Score = 63.5 bits (153), Expect = 8e-09
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I + ++ + M F++ DP+ ANALRR ++AEVPT+AI+ V M NNT+++ DE L+HRL
Sbjct: 15 ISVRTLEPDYMVFELKNTDPSSANALRRAMVAEVPTIAIDLVEMENNTTVLNDEFLAHRL 74
[182][TOP]
>UniRef100_B0EJB9 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0EJB9_ENTDI
Length = 291
Score = 63.5 bits (153), Expect = 8e-09
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E +EFD +G D ++AN LRRI+IAEVPT+AIE V + +N+S I DE+L HRL
Sbjct: 15 EKVEFDAMGIDVSVANGLRRIMIAEVPTMAIEMVVLEDNSSAIPDEMLCHRL 66
[183][TOP]
>UniRef100_A9BKT2 Rpa5 n=1 Tax=Cryptophyta RepID=A9BKT2_9CRYP
Length = 335
Score = 63.2 bits (152), Expect = 1e-08
Identities = 39/117 (33%), Positives = 64/117 (54%)
Frame = +2
Query: 170 KDKGKGKLPEHLELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVI 349
++K K K+ +HLE ++ FN + I S N N + + F+ I
Sbjct: 4 QNKNKKKVLKHLE----------QIQFNKSFIGSKNFIENQ---NPFSISDFRYGISIKA 50
Query: 350 NKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
K ++E + F + G D + +NALRRIL++E+ IE VF +N+SI+ DE+++HRL
Sbjct: 51 IKKNQEELIFQIKGFDFSFSNALRRILLSEISIFGIEKVFFYDNSSILNDEIIAHRL 107
[184][TOP]
>UniRef100_A4RSP9 DNA-directed RNA polymerase II subunit 3 n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4RSP9_OSTLU
Length = 318
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/60 (46%), Positives = 47/60 (78%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +++ E + FD+ G D ++ANALRR++IA+VPTV+I+ V +I N+S++ DE L+HRL
Sbjct: 11 VTVARLEDETIIFDLKGVDVSLANALRRLMIADVPTVSIDLVEVIENSSVLCDEFLAHRL 70
[185][TOP]
>UniRef100_A9URC4 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9URC4_MONBE
Length = 276
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +2
Query: 323 FKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDE 502
F S +I + + + + + F + CD A+AN+ RR++IAEVPT+AI+ V + NTS++ DE
Sbjct: 7 FNSSPRIEVTEHNHDEITFVLKSCDLALANSFRRVMIAEVPTMAIDAVHIAKNTSVLHDE 66
Query: 503 VLSHRL 520
L+HRL
Sbjct: 67 FLAHRL 72
[186][TOP]
>UniRef100_C1MVZ5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MVZ5_9CHLO
Length = 333
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IV+ ++ E + F ++ D ++ANALRR++IAEVPT+AI+ V +I NTS + DE ++HRL
Sbjct: 14 IVVQELTHEKIRFALLHTDTSVANALRRVIIAEVPTLAIDLVDVIENTSCLCDEFIAHRL 73
[187][TOP]
>UniRef100_B5Y3D1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B5Y3D1_PHATR
Length = 319
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +2
Query: 344 VINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++ + + + + D + NALRRIL+AEVPTVA+E+++M N+S+I DEVLSHRL
Sbjct: 3 ILERPSEHELVLEFLHVDTSFVNALRRILLAEVPTVALENIYMWENSSLIHDEVLSHRL 61
[188][TOP]
>UniRef100_Q4N9T5 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
RepID=Q4N9T5_THEPA
Length = 354
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = +2
Query: 308 WDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTS 487
W K S +IV + DR M+F ++ D + ANA+RR++++E+P++AIE V ++ NTS
Sbjct: 3 WAPRQIKPSIEIVDLRKDR--MDFILLNSDVSTANAIRRVILSEIPSLAIEIVTVLENTS 60
Query: 488 IIQDEVLSHRL 520
++ DE +SHRL
Sbjct: 61 VLHDEYISHRL 71
[189][TOP]
>UniRef100_Q4UFZ3 DNA-directed RNA polymerase ii, putative n=1 Tax=Theileria annulata
RepID=Q4UFZ3_THEAN
Length = 354
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/71 (40%), Positives = 49/71 (69%)
Frame = +2
Query: 308 WDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTS 487
W K S ++V + DR M+F ++ D + ANA+RR++++E+P++AIE V ++ NTS
Sbjct: 3 WAPRQIKPSIEVVDLRKDR--MDFILLNSDVSTANAIRRVILSEIPSLAIEIVTVLENTS 60
Query: 488 IIQDEVLSHRL 520
++ DE +SHRL
Sbjct: 61 VLHDEYISHRL 71
[190][TOP]
>UniRef100_A7AQ72 DNA-directed RNA polymerase, alpha subunit, N terminal domain
containing protein n=1 Tax=Babesia bovis
RepID=A7AQ72_BABBO
Length = 319
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +2
Query: 389 GCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
G + AIANA+RRIL+AEVPT+AIE V + NT +IQDEVL+HRL
Sbjct: 52 GLNVAIANAIRRILLAEVPTLAIESVHIYQNTGVIQDEVLAHRL 95
[191][TOP]
>UniRef100_Q4UFV7 DNA-directed RNA polymerases I and III, 40 kDa polypeptide,
putative n=1 Tax=Theileria annulata RepID=Q4UFV7_THEAN
Length = 329
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 332 SFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLS 511
+ QI K E ++ G D + ANALRRILI+EVPT+A+E V + NT ++QDE+L+
Sbjct: 32 NLQIKFLKKTPEFSVVEIAGLDVSFANALRRILISEVPTLAVETVQIYQNTGVVQDELLA 91
Query: 512 HRL 520
HRL
Sbjct: 92 HRL 94
[192][TOP]
>UniRef100_Q4P8L3 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P8L3_USTMA
Length = 329
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/61 (45%), Positives = 46/61 (75%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I + ++DR+ F + D + AN+LRRI+IA++PTVAI+ V + NNT+++ DE+L+HR
Sbjct: 13 KITVRQLDRDHANFILENVDLSFANSLRRIMIADIPTVAIDMVEIRNNTTVLPDEMLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[193][TOP]
>UniRef100_B9PNQ8 DNA-directed RNA polymerase II, putative n=1 Tax=Toxoplasma gondii
GT1 RepID=B9PNQ8_TOXGO
Length = 484
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/60 (45%), Positives = 45/60 (75%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IV+ ++ + ++F + CD +IAN LRR++I+EVP++AI+ V + NTS++ DE +SHRL
Sbjct: 153 IVVKEVSQNKVKFLLENCDVSIANGLRRVMISEVPSLAIDLVTVYENTSVLHDEYISHRL 212
[194][TOP]
>UniRef100_B6KGB1 DNA-directed RNA polymerase II, putative n=2 Tax=Toxoplasma gondii
RepID=B6KGB1_TOXGO
Length = 484
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/60 (45%), Positives = 45/60 (75%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
IV+ ++ + ++F + CD +IAN LRR++I+EVP++AI+ V + NTS++ DE +SHRL
Sbjct: 153 IVVKEVSQNKVKFLLENCDVSIANGLRRVMISEVPSLAIDLVTVYENTSVLHDEYISHRL 212
[195][TOP]
>UniRef100_A3CWH9 DNA-directed RNA polymerase, subunit D n=1 Tax=Methanoculleus
marisnigri JR1 RepID=A3CWH9_METMJ
Length = 276
Score = 60.8 bits (146), Expect = 5e-08
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I +++D V +F + G + AN LRR +I+EVPT+AIE V + +NTS++ DE+L+HR
Sbjct: 2 EIAFSRLDERVAKFTLSGVSMSFANMLRRAMISEVPTLAIEDVRIYDNTSVLFDEMLAHR 61
Query: 518 L 520
L
Sbjct: 62 L 62
[196][TOP]
>UniRef100_A9SHD1 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHD1_PHYPA
Length = 324
Score = 60.1 bits (144), Expect = 9e-08
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +2
Query: 347 INKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I + +V++F++ D +IANALRRI+IAEVPT+AI+ V + +N+S++ DE L+HRL
Sbjct: 14 IRDIKDDVLKFELRDTDASIANALRRIMIAEVPTLAIDLVEIESNSSVLNDEFLAHRL 71
[197][TOP]
>UniRef100_Q01F02 Rpb3 DNA-directed RNA polymerase II subunit 3 (IC) n=1
Tax=Ostreococcus tauri RepID=Q01F02_OSTTA
Length = 301
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/60 (41%), Positives = 46/60 (76%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ + +++ + + F + G D ++ANALRR++IA+VPT+AI+ V ++ N+S++ DE L+HRL
Sbjct: 11 VSVTRLEDQSITFSLKGVDVSLANALRRVMIADVPTLAIDLVEVVENSSVLCDEFLAHRL 70
[198][TOP]
>UniRef100_B6AI35 DNA-directed RNA polymerase II subunit RPB3, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AI35_9CRYT
Length = 348
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I I + V++F + D ++ANALRRI++AE+PT+AI+ V +I+NTS++ DE + HRL
Sbjct: 11 IEITEFSPSVIKFILSNTDVSMANALRRIMLAEIPTLAIDLVTIIDNTSVLHDEFIVHRL 70
[199][TOP]
>UniRef100_Q5JTE5 Polymerase (RNA) I polypeptide C, 30kDa n=1 Tax=Homo sapiens
RepID=Q5JTE5_HUMAN
Length = 99
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +2
Query: 203 LELRRDFVTCGDRLNFNVNTITSANTFNAMGVDNSWDFAAFKDSFQIVINKMDREVMEFD 382
+E R V G+ NV+T ++ G D++WD F+ +F++ + MD +EFD
Sbjct: 7 VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 64
Query: 383 MIGCDPAIANALRRILIAEV 442
M+G D AIANA RRIL+AEV
Sbjct: 65 MVGIDAAIANAFRRILLAEV 84
[200][TOP]
>UniRef100_Q75B05 ADL120Cp n=1 Tax=Eremothecium gossypii RepID=Q75B05_ASHGO
Length = 311
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/61 (44%), Positives = 46/61 (75%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + ++ ++F + D ++AN+LRRI+IAE+PT+AI+ V + +NTS++ DE +SHR
Sbjct: 7 QVKIREATKDNVDFILSNVDLSLANSLRRIMIAEIPTLAIDSVEIESNTSVLADEFISHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[201][TOP]
>UniRef100_Q6FPN4 Similar to uniprot|P16370 Saccharomyces cerevisiae YIL021w RPB3 n=1
Tax=Candida glabrata RepID=Q6FPN4_CANGA
Length = 312
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + R+ ++F + D A+AN+LRR++IAE+PT+AI+ V + NT+++ DE L+HR
Sbjct: 7 QVKIREATRDNVDFILSNVDLALANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFLAHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[202][TOP]
>UniRef100_Q4FY45 DNA-directed RNA polymerase I-like protein n=1 Tax=Leishmania major
strain Friedlin RepID=Q4FY45_LEIMA
Length = 337
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/52 (48%), Positives = 40/52 (76%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E + F + D + ANALRR+++AE+PT+AIE+V + NTS++ DE+++HRL
Sbjct: 17 ETLTFQLSEVDSSFANALRRVMLAEIPTLAIEYVTIRQNTSVLPDEMIAHRL 68
[203][TOP]
>UniRef100_A4I451 DNA-directed RNA polymerase I-like protein n=1 Tax=Leishmania
infantum RepID=A4I451_LEIIN
Length = 337
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/52 (48%), Positives = 40/52 (76%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E + F + D + ANALRR+++AE+PT+AIE+V + NTS++ DE+++HRL
Sbjct: 17 ETLTFQLSEVDSSFANALRRVMLAEIPTLAIEYVTIRQNTSVLPDEMIAHRL 68
[204][TOP]
>UniRef100_C4XY52 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4XY52_CLAL4
Length = 307
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/61 (44%), Positives = 47/61 (77%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I + +R+ ++F + G D ++AN+LRR +++EVPT+AI+ V + NTS++ DE+LSHR
Sbjct: 11 RVTIRQTERDHVDFILRGVDLSVANSLRRTMLSEVPTLAIDLVEIDVNTSVLADELLSHR 70
Query: 518 L 520
L
Sbjct: 71 L 71
[205][TOP]
>UniRef100_B3RV95 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RV95_TRIAD
Length = 274
Score = 58.5 bits (140), Expect = 3e-07
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I + E ++F + D ++AN+LRRI IA VPT+AI+ V +NNTS++ DE ++HR
Sbjct: 8 RVTIPDLTNENVKFILENTDLSVANSLRRIFIANVPTLAIDWVQFVNNTSVLSDEFIAHR 67
Query: 518 L 520
L
Sbjct: 68 L 68
[206][TOP]
>UniRef100_A4HH22 DNA-directed RNA polymerase I-like protein n=1 Tax=Leishmania
braziliensis RepID=A4HH22_LEIBR
Length = 337
Score = 58.5 bits (140), Expect = 3e-07
Identities = 25/52 (48%), Positives = 40/52 (76%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E + F + D + ANALRR+++AE+PT+AIE+V + NTS++ DE+++HRL
Sbjct: 17 ETLTFQLNEVDSSFANALRRVMLAEIPTLAIEYVTIRQNTSVLPDEMIAHRL 68
[207][TOP]
>UniRef100_Q2MGQ5 RNA polymerase, dimerisation n=1 Tax=Medicago truncatula
RepID=Q2MGQ5_MEDTR
Length = 318
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/61 (42%), Positives = 46/61 (75%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I ++ + M+F++ D ++ANALRR++I+EVPTVAI+ V + N+S++ DE ++HR
Sbjct: 11 RVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHR 70
Query: 518 L 520
L
Sbjct: 71 L 71
[208][TOP]
>UniRef100_B9HS44 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HS44_POPTR
Length = 346
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/61 (44%), Positives = 46/61 (75%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I I +M + ++F++ D ++ANALRR++IAEVPT+AI+ V + N+S++ DE ++HR
Sbjct: 11 KIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHR 70
Query: 518 L 520
L
Sbjct: 71 L 71
[209][TOP]
>UniRef100_C5DWL5 ZYRO0D15796p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DWL5_ZYGRC
Length = 308
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + RE ++F + + A+AN+LRR++IAE+PT+AI+ V + NTS++ DE ++HR
Sbjct: 7 QVKIREATRENVDFILSHVELAMANSLRRVMIAEIPTLAIDSVEVETNTSVLADEFIAHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[210][TOP]
>UniRef100_Q45NH1 DNA-directed RNA polymerase II third largest subunit (Fragment) n=1
Tax=Medicago sativa RepID=Q45NH1_MEDSA
Length = 184
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/61 (40%), Positives = 46/61 (75%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I ++ + M+F++ D ++ANALRR++I+EVPT+AI+ V + N+S++ DE ++HR
Sbjct: 6 RVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVLNDEFIAHR 65
Query: 518 L 520
L
Sbjct: 66 L 66
[211][TOP]
>UniRef100_C5DHI5 KLTH0E04598p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DHI5_LACTC
Length = 328
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + ++ ++F + D +AN+LRR++IAE+PT+AI+ V + NTS++ DE +SHR
Sbjct: 7 QVKIREATKDNVDFILSNVDITMANSLRRVMIAEIPTLAIDSVEVETNTSVLADEFISHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[212][TOP]
>UniRef100_C4JV60 DNA-directed RNA polymerase II 45 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JV60_UNCRE
Length = 345
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + ++ ++F ++ D A AN+LRR+++ EVPTVAI+ V + +NTS++ DE ++HR
Sbjct: 14 QVTVRDVETHRVDFRLMSVDLAFANSLRRVMLTEVPTVAIDVVEIESNTSVLPDEFIAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[213][TOP]
>UniRef100_C0NSH0 DNA-directed RNA polymerase II polypeptide n=1 Tax=Ajellomyces
capsulatus G186AR RepID=C0NSH0_AJECG
Length = 475
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR L+AE+PTVAI+ V + +NTS++ DE +SHR
Sbjct: 14 QVTVREAEPHRVDFRLSSVDLAFANSLRRTLLAEIPTVAIDVVEIESNTSVLPDEFISHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[214][TOP]
>UniRef100_Q8I2S6 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8I2S6_PLAF7
Length = 335
Score = 57.4 bits (137), Expect = 6e-07
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
QI I K+ ++ + F + + IANALRRI+++E+PT+AI+ V + NTS DE ++HR
Sbjct: 12 QINITKLTKDELYFTLYNSNSGIANALRRIMLSEIPTLAIDVVNVYENTSAFHDEFIAHR 71
Query: 518 L 520
L
Sbjct: 72 L 72
[215][TOP]
>UniRef100_Q7RN53 DNA-directed RNA polymerases i and iii 40 kDa polypeptide n=1
Tax=Plasmodium yoelii yoelii RepID=Q7RN53_PLAYO
Length = 286
Score = 57.4 bits (137), Expect = 6e-07
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +2
Query: 347 INKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I K + ++ ++ + +IANALRRI+I+EVPT+AIE V + NT +I DE+L HRL
Sbjct: 3 IIKNEENLLILEIKNLNVSIANALRRIMISEVPTIAIEKVNIFQNTGVIADEILCHRL 60
[216][TOP]
>UniRef100_Q7RLX3 Conjugation stage-specific protein, putative n=1 Tax=Plasmodium
yoelii yoelii RepID=Q7RLX3_PLAYO
Length = 335
Score = 57.4 bits (137), Expect = 6e-07
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I I + + MEF + + A+ANALRRI+++EVPT+AI+ V + NTS DE ++HR
Sbjct: 14 EIEIKSISKNEMEFTLYNSNSALANALRRIMLSEVPTLAIDIVNVYENTSPFHDEFIAHR 73
Query: 518 L 520
+
Sbjct: 74 I 74
[217][TOP]
>UniRef100_Q4DWU1 DNA-directed RNA polymerase II subunit 3, putative n=1
Tax=Trypanosoma cruzi RepID=Q4DWU1_TRYCR
Length = 363
Score = 57.4 bits (137), Expect = 6e-07
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
E +EF + D + AN LRR+++AEVP + IE V +I NTS++ DE+++HR+
Sbjct: 43 ETLEFQLAEVDNSFANGLRRVMLAEVPVLGIESVTIIQNTSVLPDEMIAHRI 94
[218][TOP]
>UniRef100_A3GF98 45 kDa subunit of RNA polymerase II n=1 Tax=Pichia stipitis
RepID=A3GF98_PICST
Length = 315
Score = 57.4 bits (137), Expect = 6e-07
Identities = 28/64 (43%), Positives = 45/64 (70%)
Frame = +2
Query: 329 DSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVL 508
D + I + +R+ + F + D A+AN++RR+++AEVPT+AI+ V + NTS++ DE L
Sbjct: 7 DGPSVTIRESERDHVNFILRDVDMAMANSVRRVMLAEVPTLAIDLVEIDVNTSVLADEFL 66
Query: 509 SHRL 520
SHRL
Sbjct: 67 SHRL 70
[219][TOP]
>UniRef100_A7IAH5 DNA-directed RNA polymerase n=1 Tax=Candidatus Methanoregula boonei
6A8 RepID=A7IAH5_METB6
Length = 276
Score = 57.4 bits (137), Expect = 6e-07
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I +D V F + G P AN+ RR +I EVPT+AIE V + +NTS + DE+L+HR
Sbjct: 2 EIEFASLDDTVARFTLSGAQPGFANSFRRAMIGEVPTLAIEDVRIYDNTSALFDEMLAHR 61
Query: 518 L 520
L
Sbjct: 62 L 62
[220][TOP]
>UniRef100_P16370 DNA-directed RNA polymerase II subunit RPB3 n=6 Tax=Saccharomyces
cerevisiae RepID=RPB3_YEAST
Length = 318
Score = 57.4 bits (137), Expect = 6e-07
Identities = 25/61 (40%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + ++ ++F + D A+AN+LRR++IAE+PT+AI+ V + NT+++ DE ++HR
Sbjct: 7 QVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[221][TOP]
>UniRef100_P16925 Conjugation stage-specific protein n=2 Tax=Tetrahymena thermophila
RepID=CNJC_TETTH
Length = 310
Score = 57.4 bits (137), Expect = 6e-07
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +2
Query: 329 DSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVL 508
+ ++ + ++ EF + CD ++AN+LRRIL+AE+ T+AI +V + NTS + DE +
Sbjct: 2 EGIKLTLTNLEEFKCEFTLENCDISLANSLRRILLAEIETIAIHNVKVYENTSSLPDEYI 61
Query: 509 SHRL 520
+HRL
Sbjct: 62 AHRL 65
[222][TOP]
>UniRef100_B9RYB6 DNA-directed RNA polymerase II subunit, putative n=1 Tax=Ricinus
communis RepID=B9RYB6_RICCO
Length = 318
Score = 57.0 bits (136), Expect = 8e-07
Identities = 28/68 (41%), Positives = 49/68 (72%)
Frame = +2
Query: 317 AAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQ 496
A+++ +I I ++ + +F++ D ++ANALRR++IAEVPTVAI+ V + N+S++
Sbjct: 4 ASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLN 63
Query: 497 DEVLSHRL 520
DE ++HRL
Sbjct: 64 DEFIAHRL 71
[223][TOP]
>UniRef100_Q4Z7P9 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium berghei
RepID=Q4Z7P9_PLABE
Length = 331
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I I + + MEF + + A+ANALRRI+++EVPT+AI+ V + NTS DE ++HR
Sbjct: 10 KIEIKSISKNEMEFTLYNSNAALANALRRIMLSEVPTLAIDIVNVYENTSPFHDEFIAHR 69
Query: 518 L 520
+
Sbjct: 70 I 70
[224][TOP]
>UniRef100_A7AWB4 DNA-directed RNA polymerase II, putative n=1 Tax=Babesia bovis
RepID=A7AWB4_BABBO
Length = 382
Score = 57.0 bits (136), Expect = 8e-07
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = +2
Query: 308 WDFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTS 487
W + S IV + M F ++ D A AN+LRRI+++E+P++AIE V ++ NTS
Sbjct: 3 WSSRQLRPSIDIV--SLTSTKMIFILLNADVATANSLRRIMLSEIPSLAIEVVTVLENTS 60
Query: 488 IIQDEVLSHRL 520
++ DE ++HRL
Sbjct: 61 VLHDEYIAHRL 71
[225][TOP]
>UniRef100_C5GT99 RNA polymerase II subunit 3 n=2 Tax=Ajellomyces dermatitidis
RepID=C5GT99_AJEDR
Length = 346
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR L+AEVPTVAI+ V + +NTS++ DE ++HR
Sbjct: 14 QVTVREAEPHRVDFRLSSVDLAFANSLRRTLLAEVPTVAIDVVEIESNTSVLPDEFIAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[226][TOP]
>UniRef100_B8M3N2 RNA polymerase II subunit 3 n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8M3N2_TALSN
Length = 353
Score = 57.0 bits (136), Expect = 8e-07
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D +ANALRR +IAEVPTVAI+ V + NTS+I DE L+HR
Sbjct: 13 QVTVREAEPYRVDFKLSNVDLTLANALRRTMIAEVPTVAIDIVEVEVNTSVIPDEFLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[227][TOP]
>UniRef100_Q1DX59 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1DX59_COCIM
Length = 345
Score = 56.6 bits (135), Expect = 1e-06
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR+++ EVPTVAI+ V + +NTS++ DE ++HR
Sbjct: 14 QVTVREAEPHRVDFRLTSVDLAFANSLRRVMLTEVPTVAIDVVEIESNTSVLPDEFIAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[228][TOP]
>UniRef100_C5P0B5 DNA-directed RNA polymerase II 45 kDa polypeptide, putative n=1
Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5P0B5_COCP7
Length = 345
Score = 56.6 bits (135), Expect = 1e-06
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR+++ EVPTVAI+ V + +NTS++ DE ++HR
Sbjct: 14 QVTVREAEPHRVDFRLTSVDLAFANSLRRVMLTEVPTVAIDVVEIESNTSVLPDEFIAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[229][TOP]
>UniRef100_A1DHL4 RNA polymerase II subunit 3 n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1DHL4_NEOFI
Length = 336
Score = 56.6 bits (135), Expect = 1e-06
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR+++AEVPT+AI+ V + NTS++ DE L+HR
Sbjct: 13 QVTVREAEPYRVDFKLSSVDLAFANSLRRVILAEVPTMAIDLVEVEKNTSVLPDEFLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[230][TOP]
>UniRef100_A1C6Y7 RNA polymerase II subunit 3 n=1 Tax=Aspergillus clavatus
RepID=A1C6Y7_ASPCL
Length = 333
Score = 56.6 bits (135), Expect = 1e-06
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR+++AEVPT+AI+ V + NTS++ DE L+HR
Sbjct: 13 QVTVREAEPYHVDFKLSSVDLAFANSLRRVILAEVPTMAIDLVEVERNTSVLPDEFLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[231][TOP]
>UniRef100_A8MDY7 RNA polymerase insert n=1 Tax=Caldivirga maquilingensis IC-167
RepID=A8MDY7_CALMQ
Length = 305
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/52 (46%), Positives = 41/52 (78%)
Frame = +2
Query: 365 EVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ ++F + G P++ N+LRRILI +VP +AI+ V +++NT+++ DEVL+HRL
Sbjct: 15 DYLKFVVEGVKPSLINSLRRILITDVPVLAIDRVIVLDNTTVMYDEVLAHRL 66
[232][TOP]
>UniRef100_Q8ZYQ3 DNA-directed RNA polymerase subunit D n=1 Tax=Pyrobaculum
aerophilum RepID=RPOD_PYRAE
Length = 260
Score = 56.6 bits (135), Expect = 1e-06
Identities = 22/44 (50%), Positives = 38/44 (86%)
Frame = +2
Query: 389 GCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
G P++ N+LRR++I+E+P +AI++V ++NNTS++ DE+L+HRL
Sbjct: 20 GVPPSLVNSLRRVIISELPVMAIDNVVVVNNTSVMYDEMLAHRL 63
[233][TOP]
>UniRef100_Q6CQL6 KLLA0D16170p n=1 Tax=Kluyveromyces lactis RepID=Q6CQL6_KLULA
Length = 307
Score = 56.2 bits (134), Expect = 1e-06
Identities = 24/61 (39%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ I + ++ ++F + D A+AN+LRR++I+E+PT+AI+ V + NT+++ DE ++HR
Sbjct: 7 QVKIREATKDNVDFILSNVDLALANSLRRVMISEIPTLAIDSVEIETNTTVLADEFIAHR 66
Query: 518 L 520
L
Sbjct: 67 L 67
[234][TOP]
>UniRef100_Q6BUW0 DEHA2C07546p n=1 Tax=Debaryomyces hansenii RepID=Q6BUW0_DEBHA
Length = 311
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I D+E ++F + D A+AN++RR ++AEVPT+AI+ V + NTS++ DE +SHR
Sbjct: 12 RVTIRHTDKEHVDFILKDVDLAMANSMRRTMLAEVPTLAIDLVEIEVNTSVLADEFISHR 71
Query: 518 L 520
L
Sbjct: 72 L 72
[235][TOP]
>UniRef100_Q0CYF6 DNA-directed RNA polymerase II 45 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0CYF6_ASPTN
Length = 331
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR ++AEVPTVAI+ V + NTS++ DE L+HR
Sbjct: 14 QVTVREAEPYRVDFKLSSVDLAFANSLRRTMLAEVPTVAIDLVEVEKNTSVLPDEFLAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[236][TOP]
>UniRef100_B6QC29 RNA polymerase II subunit 3 n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QC29_PENMQ
Length = 352
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D +ANALRR +IAEVPTVAI+ V + NTS++ DE L+HR
Sbjct: 13 QVTVRETEPYRVDFKLSNVDLTLANALRRTMIAEVPTVAIDIVEVEVNTSVLPDEFLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[237][TOP]
>UniRef100_UPI00019253CC PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI00019253CC
Length = 273
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = +2
Query: 371 MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++F + D ++AN+LRRI IAEVPT+AI+ V + NNTS++ DE ++HR+
Sbjct: 19 LKFILENTDLSVANSLRRIFIAEVPTIAIDWVQIENNTSVLHDEFIAHRI 68
[238][TOP]
>UniRef100_UPI0001925380 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001925380
Length = 289
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = +2
Query: 371 MEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
++F + D ++AN+LRRI IAEVPT+AI+ V + NNTS++ DE ++HR+
Sbjct: 19 LKFILENTDLSVANSLRRIFIAEVPTIAIDWVQIENNTSVLHDEFIAHRI 68
[239][TOP]
>UniRef100_Q8LAJ1 DNA-directed RNA polymerase II, third largest subunit n=1
Tax=Arabidopsis thaliana RepID=Q8LAJ1_ARATH
Length = 319
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/70 (40%), Positives = 49/70 (70%)
Frame = +2
Query: 311 DFAAFKDSFQIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSI 490
D A ++ +I I ++ + +F++ D ++ANALRR++I+EVPTVAI+ V + N+S+
Sbjct: 2 DGATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSV 61
Query: 491 IQDEVLSHRL 520
+ DE ++HRL
Sbjct: 62 LNDEFIAHRL 71
[240][TOP]
>UniRef100_Q6YX88 Os09g0110400 protein n=2 Tax=Oryza sativa RepID=Q6YX88_ORYSJ
Length = 330
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/61 (42%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I ++ + +F++ D ++ANALRR++IAEVPTVAI+ V + N+S++ DE ++HR
Sbjct: 15 RVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHR 74
Query: 518 L 520
L
Sbjct: 75 L 75
[241][TOP]
>UniRef100_B6TCC3 DNA-directed RNA polymerase II 36 kDa polypeptide A n=1 Tax=Zea
mays RepID=B6TCC3_MAIZE
Length = 328
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/61 (42%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
++ I ++ + +F++ D ++ANALRR++IAEVPTVAI+ V + N+S++ DE ++HR
Sbjct: 14 RVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHR 73
Query: 518 L 520
L
Sbjct: 74 L 74
[242][TOP]
>UniRef100_A7P9N6 Chromosome chr3 scaffold_8, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P9N6_VITVI
Length = 318
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I I ++ + +F++ D ++ANALRR++IAEVPTVAI+ V + N+S++ DE ++HR
Sbjct: 11 KIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHR 70
Query: 518 L 520
L
Sbjct: 71 L 71
[243][TOP]
>UniRef100_A5B429 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B429_VITVI
Length = 318
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
+I I ++ + +F++ D ++ANALRR++IAEVPTVAI+ V + N+S++ DE ++HR
Sbjct: 11 KIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHR 70
Query: 518 L 520
L
Sbjct: 71 L 71
[244][TOP]
>UniRef100_Q93338 Protein C36B1.3, partially confirmed by transcript evidence n=1
Tax=Caenorhabditis elegans RepID=Q93338_CAEEL
Length = 282
Score = 55.8 bits (133), Expect = 2e-06
Identities = 23/60 (38%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I + ++ ++++F + D ++AN+LRR+ +AEVPT+AI+ V + NTS++ DE ++HR+
Sbjct: 9 IEVTELTNDIIKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLHDEFIAHRM 68
[245][TOP]
>UniRef100_Q5CSH3 RNA polymerase II B3 subunit n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CSH3_CRYPV
Length = 355
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2
Query: 347 INKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I ++ + F + D ++AN LRRI++AE+PT+AI+ V MI+NTS++ DE + HR+
Sbjct: 14 ITELTPNSIRFTLSNTDLSMANTLRRIILAEIPTLAIDLVTMIDNTSVLHDEFIVHRM 71
[246][TOP]
>UniRef100_Q5CNH1 Conjugation stage-specific protein n=1 Tax=Cryptosporidium hominis
RepID=Q5CNH1_CRYHO
Length = 355
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2
Query: 347 INKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
I ++ + F + D ++AN LRRI++AE+PT+AI+ V MI+NTS++ DE + HR+
Sbjct: 14 ITELTPNSIRFTLSNTDLSMANTLRRIILAEIPTLAIDLVTMIDNTSVLHDEFIVHRM 71
[247][TOP]
>UniRef100_A8PAX3 DNA-directed RNA polymerase II 33 kDa polypeptide, putative n=1
Tax=Brugia malayi RepID=A8PAX3_BRUMA
Length = 275
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/60 (41%), Positives = 44/60 (73%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ I ++ E++ F + D ++AN+LRRI +AEVPT+AI+ V + +N+S++ DE ++HRL
Sbjct: 9 VAITALNDEIVRFVLEDTDLSVANSLRRIFMAEVPTMAIDWVQIESNSSVLHDEFIAHRL 68
[248][TOP]
>UniRef100_Q5A462 DNA-directed RNA polymerase II 45 kDa polypeptide n=1 Tax=Candida
albicans RepID=Q5A462_CANAL
Length = 318
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ I + +++ + F + D A+AN++RR +IAEVPT+AI+ V + NTS++ DE LSHRL
Sbjct: 11 VTIREAEKDHVNFILKNVDLAVANSMRRTIIAEVPTLAIDLVEIDVNTSVLADEFLSHRL 70
[249][TOP]
>UniRef100_Q2UF63 RNA polymerase II n=1 Tax=Aspergillus oryzae RepID=Q2UF63_ASPOR
Length = 342
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +2
Query: 338 QIVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHR 517
Q+ + + + ++F + D A AN+LRR ++AEVPT+AI+ V + NTS++ DE L+HR
Sbjct: 13 QVTVREAEPYRVDFKLSSVDLAFANSLRRAMLAEVPTIAIDLVEVEKNTSVLPDEFLAHR 72
Query: 518 L 520
L
Sbjct: 73 L 73
[250][TOP]
>UniRef100_B9WGL5 DNA-directed RNA polymerase II subunit, putative n=1 Tax=Candida
dubliniensis CD36 RepID=B9WGL5_CANDC
Length = 313
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +2
Query: 341 IVINKMDREVMEFDMIGCDPAIANALRRILIAEVPTVAIEHVFMINNTSIIQDEVLSHRL 520
+ I + +++ + F + D A+AN++RR +IAEVPT+AI+ V + NTS++ DE LSHRL
Sbjct: 11 VTIREAEKDHVNFILKNVDLAVANSMRRTIIAEVPTLAIDLVEIDVNTSVLADEFLSHRL 70