[UP]
[1][TOP]
>UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE
Length = 185
Score = 286 bits (733), Expect = 7e-76
Identities = 139/141 (98%), Positives = 140/141 (99%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSVSAAVARPARSSVRPMAALKPAV AAPVAAPAQANQMMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM
Sbjct: 66 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 125
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGCR+PMQVLREIVACTKAFP
Sbjct: 126 FGCRDPMQVLREIVACTKAFP 146
Score = 77.0 bits (188), Expect = 1e-12
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDNQKQVQIMGFLVQRPKS RDWQ NKR
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKR 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[2][TOP]
>UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE
Length = 185
Score = 284 bits (727), Expect = 3e-75
Identities = 137/141 (97%), Positives = 140/141 (99%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSVSAAVARPARSSVRPMAALKPAV AAPVAAPAQANQMMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM
Sbjct: 66 LTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 125
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGCR+PMQVLREIVACTKAFP
Sbjct: 126 FGCRDPMQVLREIVACTKAFP 146
Score = 72.0 bits (175), Expect = 4e-11
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDNQKQVQIMGFLVQRPK+ RD+Q NKR
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKR 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[3][TOP]
>UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
reinhardtii RepID=A8JGP8_CHLRE
Length = 188
Score = 275 bits (702), Expect = 3e-72
Identities = 149/188 (79%), Positives = 152/188 (80%), Gaps = 2/188 (1%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSVSAAVARPARSSVRPMAALKPAV AAPVAAPAQANQMMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL--YYDNRYWTMWKL 361
LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC D+ +L
Sbjct: 66 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCRQPLLDHVEAAHVRL 125
Query: 362 PMFGCREPMQVLREIVACTKAFPGCLRAPAGLRQPEAGADHGLPGTAPQVWPRLADRQQA 541
P P + P CLRAP GLRQPEAGADHGLPG APQV PRLA RQQA
Sbjct: 126 P-----RPHAGAARDRRLHQGLPRCLRAPGGLRQPEAGADHGLPGPAPQVCPRLAARQQA 180
Query: 542 LRVNGGAR 565
LRVNGGAR
Sbjct: 181 LRVNGGAR 188
[4][TOP]
>UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U90_VOLCA
Length = 185
Score = 273 bits (698), Expect = 8e-72
Identities = 129/141 (91%), Positives = 136/141 (96%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSV+A VARPARSSVRP+A LKPAV AAPVAAPAQAN+MMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKLPM
Sbjct: 66 LTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKLPM 125
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGCR+PMQVLREIVACTKAFP
Sbjct: 126 FGCRDPMQVLREIVACTKAFP 146
Score = 74.3 bits (181), Expect = 7e-12
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDN KQVQIMGFLVQRPKS RDWQ NKR
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQRPKSARDWQPANKR 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[5][TOP]
>UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U92_VOLCA
Length = 185
Score = 270 bits (690), Expect = 7e-71
Identities = 126/141 (89%), Positives = 135/141 (95%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSV+ AV RPARSSVRP+A LKPA+ AAPVA+PAQAN+MMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKLPM
Sbjct: 66 LTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKLPM 125
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGCR+PMQVLREIVACTKAFP
Sbjct: 126 FGCRDPMQVLREIVACTKAFP 146
Score = 74.3 bits (181), Expect = 7e-12
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDN KQVQIMGFLVQRPKS RDWQ NKR
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQRPKSARDWQPANKR 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[6][TOP]
>UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U91_VOLCA
Length = 185
Score = 267 bits (682), Expect = 6e-70
Identities = 125/141 (88%), Positives = 132/141 (93%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
AKSSV+ AVARPARS VRP+A LKP+V A PVA P QAN+MMVWTPVNNKMFETFSYLPP
Sbjct: 6 AKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETFSYLPP 65
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LSDEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKLPM
Sbjct: 66 LSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKLPM 125
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGCR+PMQVLREIVACTKAFP
Sbjct: 126 FGCRDPMQVLREIVACTKAFP 146
Score = 74.3 bits (181), Expect = 7e-12
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDN KQVQIMGFLVQRPKS RDWQ NKR
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQRPKSARDWQPANKR 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[7][TOP]
>UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
reinhardtii RepID=A8JGP5_CHLRE
Length = 139
Score = 215 bits (547), Expect = 3e-54
Identities = 99/100 (99%), Positives = 100/100 (100%)
Frame = +2
Query: 131 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 310
MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG
Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60
Query: 311 SVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
SVSCLYYDNRYWTMWKLPMFGCR+PMQVLREIVACTKAFP
Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFP 100
Score = 77.0 bits (188), Expect = 1e-12
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + PDAYVRL+AFDNQKQVQIMGFLVQRPKS RDWQ NKR
Sbjct: 78 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKR 137
Query: 543 SV 548
SV
Sbjct: 138 SV 139
[8][TOP]
>UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
pyrenoidosa RepID=C7FF10_CHLPY
Length = 181
Score = 176 bits (446), Expect(2) = 8e-52
Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 5/142 (3%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 184
++ +A A +VRP+A LK A N + + + M VWTP+NNKMFETFSYLP
Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMWKLP
Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL+E+ C +AFP
Sbjct: 121 MFGCTDGHQVLQEVANCRRAFP 142
Score = 52.4 bits (124), Expect(2) = 8e-52
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +3
Query: 420 RPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
R PDAY+R++ FD +QVQ+ GFLV RP + RD+Q + RSV
Sbjct: 139 RAFPDAYIRMVGFDPIRQVQVAGFLVNRPSTARDYQKPSTRSV 181
[9][TOP]
>UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
tertiolecta RepID=Q5VBK1_DUNTE
Length = 189
Score = 204 bits (520), Expect = 4e-51
Identities = 96/142 (67%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPA-QANQMMVWTPVNNKMFETFSYLP 184
AKS+ A +A+ +R++ + A+LKPAV AAP A PA +ANQMMVW P+NNK FETFSYLP
Sbjct: 6 AKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFETFSYLP 65
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+ +QIA QVDYIV NGW PCLEFAE ++AYVS++SA+RFG+VS YYDNRYWTMWKLP
Sbjct: 66 PLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWTMWKLP 125
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC +P QVL EI C++AFP
Sbjct: 126 MFGCTDPSQVLSEINKCSRAFP 147
[10][TOP]
>UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS5_ACECL
Length = 184
Score = 172 bits (436), Expect(2) = 5e-49
Identities = 84/129 (65%), Positives = 95/129 (73%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 223
ARSS P A A+ VA ++ +MMVW P NNKMFETFSYLPPL+DEQI+ QVDY
Sbjct: 18 ARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDY 76
Query: 224 IVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLRE 403
I+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL E
Sbjct: 77 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 136
Query: 404 IVACTKAFP 430
I ACTKAFP
Sbjct: 137 IQACTKAFP 145
Score = 47.0 bits (110), Expect(2) = 5e-49
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP + D++ R V
Sbjct: 145 PDAYIRLVCFDANRQVQISGFLVHRPPTATDYRLPADRQV 184
[11][TOP]
>UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1
Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE
Length = 188
Score = 196 bits (499), Expect = 1e-48
Identities = 98/143 (68%), Positives = 115/143 (80%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVA-APA-QANQMMVWTPVNNKMFETFSYL 181
AKS+ A VA +R+S + A+LKPAV A P A APA +ANQMMVW P+NNK FETFSYL
Sbjct: 6 AKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFETFSYL 63
Query: 182 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 361
PPL+ +QIA QVDYIV NGW PCLEFAE +AYVS++SA+RFG+VS YYDNRYWTMWKL
Sbjct: 64 PPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYWTMWKL 123
Query: 362 PMFGCREPMQVLREIVACTKAFP 430
PMFGC +P QVL EI C++AFP
Sbjct: 124 PMFGCTDPSQVLSEINKCSRAFP 146
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + + R P++Y RL+AFDN+KQVQ++ FLVQRP++ D+ T ++R
Sbjct: 124 PMFGCTDPSQVLSEINKCSRAFPNSYQRLVAFDNKKQVQVISFLVQRPRNATDYCTISER 183
Query: 543 SV 548
SV
Sbjct: 184 SV 185
[12][TOP]
>UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS3_ACECL
Length = 183
Score = 170 bits (430), Expect(2) = 1e-48
Identities = 78/109 (71%), Positives = 85/109 (77%)
Frame = +2
Query: 104 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYV 283
AA + MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY
Sbjct: 36 AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYA 95
Query: 284 SNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
NE+ IR G VS Y DNRYWTMWKLPMFGC + QVL EI ACTKAFP
Sbjct: 96 GNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFP 144
Score = 48.1 bits (113), Expect(2) = 1e-48
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 144 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 183
[13][TOP]
>UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS4_ACECL
Length = 182
Score = 169 bits (429), Expect(2) = 1e-48
Identities = 80/131 (61%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPA--QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 217
++ +P A K ++N A + +MMVW P NNKMFETFSYLPPL+DEQI+ QV
Sbjct: 13 SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQV 72
Query: 218 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVL 397
DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL
Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132
Query: 398 REIVACTKAFP 430
EI ACTKAFP
Sbjct: 133 SEIQACTKAFP 143
Score = 48.1 bits (113), Expect(2) = 1e-48
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 143 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
[14][TOP]
>UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS6_ACECL
Length = 182
Score = 169 bits (428), Expect(2) = 2e-48
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
Frame = +2
Query: 59 RPMAALKPAVNAAPV--AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 232
+P+A K ++N V +A + +MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+A
Sbjct: 18 KPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILA 77
Query: 233 NGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVA 412
N W PCLEFA SD+AY NE+ I G V+ Y DNRYWTMWKLPMFGC + QVL EI A
Sbjct: 78 NAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQA 137
Query: 413 CTKAFP 430
CTKAFP
Sbjct: 138 CTKAFP 143
Score = 48.1 bits (113), Expect(2) = 2e-48
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 143 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
[15][TOP]
>UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
sp. HS-5 RepID=Q9XFT5_9CHLO
Length = 158
Score = 162 bits (409), Expect(2) = 5e-48
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2
Query: 92 AAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESD 271
A PVAAP +A+ VW PVNNK +ETFSYLP L+ EQIA QVDY++ NG+ PCLEFA++
Sbjct: 14 ATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADAA 72
Query: 272 KAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
++VSNE+ +RF VS YYDNRYWTMWKLPMFGC + QVL+E+ CT+AFP
Sbjct: 73 YSFVSNENTVRFSGVSANYYDNRYWTMWKLPMFGCTDAAQVLKEVALCTRAFP 125
Score = 53.9 bits (128), Expect(2) = 5e-48
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +3
Query: 420 RPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDW 524
R P+AYVRL+AFDN KQVQ MGFLVQRP +G+++
Sbjct: 122 RAFPNAYVRLVAFDNTKQVQCMGFLVQRPANGKEY 156
[16][TOP]
>UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
Tax=Acetabularia acetabulum RepID=RBS1_ACEAT
Length = 182
Score = 167 bits (423), Expect(2) = 7e-48
Identities = 78/131 (59%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAP--AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 217
++ +P+A K +N A + +MMVW P NNKMFETFS+LPPL+DEQI+ QV
Sbjct: 13 SKECAKPLATPKVTLNKRGFATTIATKNREMMVWQPFNNKMFETFSFLPPLTDEQISKQV 72
Query: 218 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVL 397
DYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL
Sbjct: 73 DYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132
Query: 398 REIVACTKAFP 430
EI ACTKAFP
Sbjct: 133 SEIQACTKAFP 143
Score = 48.1 bits (113), Expect(2) = 7e-48
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 143 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
[17][TOP]
>UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS3_ACEAT
Length = 182
Score = 166 bits (421), Expect(2) = 1e-47
Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPAQANQ--MMVWTPVNNKMFETFSYLPPLSDEQIAAQV 217
++ +P+A+ K +N A MMVW P NNKMFETFS+LPPL+DEQI+ QV
Sbjct: 13 SKECAKPLASPKVTLNKRGFATTIATKNRGMMVWQPFNNKMFETFSFLPPLTDEQISKQV 72
Query: 218 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVL 397
DYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL
Sbjct: 73 DYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVL 132
Query: 398 REIVACTKAFP 430
EI ACTKAFP
Sbjct: 133 SEIQACTKAFP 143
Score = 48.1 bits (113), Expect(2) = 1e-47
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 143 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYKLPADRQV 182
[18][TOP]
>UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS5_ACEAT
Length = 183
Score = 165 bits (417), Expect(2) = 3e-47
Identities = 78/127 (61%), Positives = 91/127 (71%), Gaps = 3/127 (2%)
Frame = +2
Query: 59 RPMAALKPAVNAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 229
+P A K ++ A + N+ MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+
Sbjct: 18 KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77
Query: 230 ANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIV 409
AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL EI
Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137
Query: 410 ACTKAFP 430
ACT AFP
Sbjct: 138 ACTNAFP 144
Score = 48.1 bits (113), Expect(2) = 3e-47
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 144 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 183
[19][TOP]
>UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS7_ACECL
Length = 183
Score = 164 bits (415), Expect(2) = 6e-47
Identities = 73/101 (72%), Positives = 82/101 (81%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR
Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G V+ Y DNRYWTMWKLPMFGC + QVL ++ ACTKAFP
Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFP 144
Score = 48.1 bits (113), Expect(2) = 6e-47
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 144 PDAYIRLVCFDANRQVQICGFLVHRPPSATDYRLPADRQV 183
[20][TOP]
>UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS4_ACEAT
Length = 182
Score = 164 bits (415), Expect(2) = 6e-47
Identities = 77/131 (58%), Positives = 92/131 (70%), Gaps = 2/131 (1%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPA--QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 217
++ +P A K + A+ + +MMVW P NNKMFETFS+LPPL+DEQI+ QV
Sbjct: 13 SKQCTKPAATPKVVTSKRSFASTVANKNREMMVWQPFNNKMFETFSFLPPLTDEQISKQV 72
Query: 218 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVL 397
DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC + QVL
Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132
Query: 398 REIVACTKAFP 430
EI ACT AFP
Sbjct: 133 SEIQACTNAFP 143
Score = 48.1 bits (113), Expect(2) = 6e-47
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 143 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
[21][TOP]
>UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BL0_NANBA
Length = 182
Score = 155 bits (392), Expect(2) = 3e-46
Identities = 71/139 (51%), Positives = 90/139 (64%)
Frame = +2
Query: 17 SVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSD 196
++S A R A + A+ K + M+VWTP+NNK FETFS+LPPLSD
Sbjct: 6 AISTAAVRIAPITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSD 65
Query: 197 EQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGC 376
+I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+MWKLPMFGC
Sbjct: 66 SEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGC 125
Query: 377 REPMQVLREIVACTKAFPG 433
+ QVL+EI CTKAFPG
Sbjct: 126 TDGSQVLKEIAGCTKAFPG 144
Score = 54.7 bits (130), Expect(2) = 3e-46
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
P AY+RL+AFDNQKQVQ GFLV RP +++Q +KRSV
Sbjct: 143 PGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182
[22][TOP]
>UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BK9_NANBA
Length = 182
Score = 154 bits (389), Expect(2) = 6e-46
Identities = 65/102 (63%), Positives = 79/102 (77%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M+VWTP+NNK FETFS+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R
Sbjct: 43 MLVWTPINNKFFETFSFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRL 102
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
S Y DNRYW+MWKLPMFGC + QVL+EI CTKAFPG
Sbjct: 103 QGTSAGYQDNRYWSMWKLPMFGCTDGSQVLKEIAGCTKAFPG 144
Score = 54.7 bits (130), Expect(2) = 6e-46
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
P AY+RL+AFDNQKQVQ GFLV RP +++Q +KRSV
Sbjct: 143 PGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182
[23][TOP]
>UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO
Length = 140
Score = 154 bits (388), Expect(2) = 1e-45
Identities = 66/99 (66%), Positives = 77/99 (77%)
Frame = +2
Query: 134 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 313
VW PVNNK +ETFSYLP L+ EQIA QVDY++ NGW PCLEFA+ ++VSNE+ +RF
Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62
Query: 314 VSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYDNRYWTMWKLPMFGC + QVL+EI AC AFP
Sbjct: 63 ASSNYYDNRYWTMWKLPMFGCTDASQVLKEIAACNAAFP 101
Score = 53.9 bits (128), Expect(2) = 1e-45
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
P++Y RL+AFDN KQVQ MGFLVQRPK+ ++ +KRSV
Sbjct: 101 PESYSRLVAFDNNKQVQCMGFLVQRPKNATEYCPVDKRSV 140
[24][TOP]
>UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
salina RepID=Q5XR40_DUNSA
Length = 190
Score = 183 bits (465), Expect = 8e-45
Identities = 94/138 (68%), Positives = 106/138 (76%), Gaps = 4/138 (2%)
Frame = +2
Query: 29 AVARP-ARSSVRPMAALKPAVNA-APVA-APA-QANQMMVWTPVNNKMFETFSYLPPLSD 196
AVA P +R S + A+LKPAV AP A APA + NQMMVW PVNNK FETFSYLPPL+
Sbjct: 11 AVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQFETFSYLPPLTA 70
Query: 197 EQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGC 376
+QIA QVDYIV NGWIPCLEF+E AYV+N + RFG VS YYDNRYWTMWKLPMFGC
Sbjct: 71 DQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNRYWTMWKLPMFGC 130
Query: 377 REPMQVLREIVACTKAFP 430
+P QVL EI C++AFP
Sbjct: 131 TDPAQVLMEIQKCSRAFP 148
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Frame = +3
Query: 306 SAACLACTTTTATGPCGS------------CPCSAAANPCRCCARSSPAPRPSPDAYVRL 449
S A +A T T GP + P +P + R P+AY RL
Sbjct: 95 SYAYVANTNTARFGPVSNNYYDNRYWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRL 154
Query: 450 LAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
+AFDN+KQVQ++ FLVQRPK+ D+ ++RSV
Sbjct: 155 VAFDNKKQVQVISFLVQRPKNSTDYCPIDQRSV 187
[25][TOP]
>UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BK3_NANBA
Length = 180
Score = 153 bits (387), Expect(2) = 9e-44
Identities = 75/135 (55%), Positives = 91/135 (67%)
Frame = +2
Query: 29 AVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIA 208
A+ RP + V+ A K V A + + MVWTPVNNK FETFS+LPPLS+ +I+
Sbjct: 10 ALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETFSFLPPLSESEIS 67
Query: 209 AQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPM 388
QVDY+V N + PCLEF+E + AYV + S IR S Y DNRYW MWKLPMFGC +
Sbjct: 68 KQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPMWKLPMFGCTDGS 127
Query: 389 QVLREIVACTKAFPG 433
QVL+EI ACTKAFPG
Sbjct: 128 QVLKEIAACTKAFPG 142
Score = 48.1 bits (113), Expect(2) = 9e-44
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
P AY+RL+AFD +QVQ+ GFLV RP ++++ ++RSV
Sbjct: 141 PGAYIRLVAFDASRQVQVAGFLVHRPAGAKEFRAPDQRSV 180
[26][TOP]
>UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
pyrenoidosa RepID=C7FF11_CHLPY
Length = 184
Score = 177 bits (448), Expect = 8e-43
Identities = 87/139 (62%), Positives = 100/139 (71%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLS 193
S V A VA RS ++P AV + + + MMVWTPVNNK FETFSYLPPLS
Sbjct: 8 SLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETFSYLPPLS 66
Query: 194 DEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFG 373
+QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+VS Y DNRYWTMWKLPMFG
Sbjct: 67 GDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTMWKLPMFG 126
Query: 374 CREPMQVLREIVACTKAFP 430
C +P QVL+EI C +AFP
Sbjct: 127 CTDPSQVLKEISNCERAFP 145
Score = 54.7 bits (130), Expect = 6e-06
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + S R PDAY+RL+AFD +QVQI GFLV RP S + + N+R
Sbjct: 123 PMFGCTDPSQVLKEISNCERAFPDAYIRLVAFDAIRQVQITGFLVHRPMSATEHRRPNER 182
Query: 543 SV 548
SV
Sbjct: 183 SV 184
[27][TOP]
>UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus
pluvialis RepID=Q30CC3_HAEPL
Length = 141
Score = 167 bits (423), Expect = 6e-40
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
MMVW P+NNK +ETFSYLPPL+ +QIA QVDY+V NGWIPCLEFA++ +AYVSN S +RF
Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
GSVS YYDNRYWT+WKLPMFGC +P VL EI +KAFP
Sbjct: 61 GSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEISRASKAFP 101
Score = 57.8 bits (138), Expect = 7e-07
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Frame = +3
Query: 303 ASAACLACTTTTATGPCGSC------------PCSAAANPCRCCARSSPAPRPSPDAYVR 446
AS A ++ +T G +C P +P S A + P AY+R
Sbjct: 47 ASQAYVSNASTVRFGSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEISRASKAFPQAYIR 106
Query: 447 LLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
++AFDN +QVQIM FLVQRP++ D+ +KRSV
Sbjct: 107 MVAFDNVRQVQIMSFLVQRPRAATDYCELSKRSV 140
[28][TOP]
>UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Chlamydomonas moewusii RepID=RBS_CHLMO
Length = 168
Score = 166 bits (420), Expect = 1e-39
Identities = 81/133 (60%), Positives = 97/133 (72%)
Frame = +2
Query: 32 VARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 211
+A A SV AA + AAPVAAPA A + VW PVNNK +ETFSYLPPL++++I
Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56
Query: 212 QVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQ 391
QVDYI+ NGW PCLEFA+ ++VSN +A+R VS YYDNRYWTMWKLPMFGC +P Q
Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQ 116
Query: 392 VLREIVACTKAFP 430
VLRE+ AC AFP
Sbjct: 117 VLREVSACQVAFP 129
[29][TOP]
>UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1
Tax=Acetabularia peniculus RepID=RBS1_ACECL
Length = 126
Score = 139 bits (350), Expect(2) = 2e-39
Identities = 62/87 (71%), Positives = 70/87 (80%)
Frame = +2
Query: 170 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 349
FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY N++ IR G V+ Y DNRYWT
Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60
Query: 350 MWKLPMFGCREPMQVLREIVACTKAFP 430
MWKLPMFGC + QVL EI ACTKAFP
Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTKAFP 87
Score = 48.1 bits (113), Expect(2) = 2e-39
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+RL+ FD +QVQI GFLV RP S D++ R V
Sbjct: 87 PDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 126
[30][TOP]
>UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO
Length = 165
Score = 161 bits (407), Expect = 4e-38
Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Frame = +2
Query: 53 SVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 232
++R A + A A A PA+ MVW PVNNK FETFSYLPPL+DEQIA QVDYIV
Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58
Query: 233 NGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIV 409
NGW PCLEF++S AY+SN + +R + YYDNRYWT+WKLPMFGC +P QVL+EI
Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMFGCTDPSQVLKEIA 118
Query: 410 ACTKAFP 430
AC KA P
Sbjct: 119 ACVKACP 125
Score = 54.3 bits (129), Expect = 8e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 363 PCSAAANPCRCCARSSPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKR 542
P +P + + + PDAYVR+ AFD +QVQ+ LV RP S +DW+T KR
Sbjct: 103 PMFGCTDPSQVLKEIAACVKACPDAYVRMAAFDANRQVQVASMLVHRPASAKDWRTPEKR 162
Query: 543 SV 548
+
Sbjct: 163 QL 164
[31][TOP]
>UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Batophora oerstedii RepID=RBS_BATOE
Length = 175
Score = 159 bits (401), Expect = 2e-37
Identities = 76/140 (54%), Positives = 95/140 (67%), Gaps = 13/140 (9%)
Frame = +2
Query: 113 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 292
+++ MMVW P NNK FETFSYLPPL+D+QI QVDYI+ N W PCLEFA SD+AYV+++
Sbjct: 31 SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHD 90
Query: 293 SAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPG------CLRAPAG 454
+ +R G + Y DNRYWTMWKLPMFGC + QVL EI ACTKAFP C A
Sbjct: 91 NTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQ 150
Query: 455 LR-------QPEAGADHGLP 493
++ +PE+ D+ LP
Sbjct: 151 VQISGFLVHRPESATDYRLP 170
[32][TOP]
>UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena
gracilis RepID=Q7M229_EUGGR
Length = 138
Score = 134 bits (338), Expect(2) = 7e-37
Identities = 63/108 (58%), Positives = 78/108 (72%), Gaps = 7/108 (6%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFA---ESDKA----YVS 286
M VW PVNNK +ETFSYLPPLSD +IA QVD I+A GWIPCLEF+ S++A Y++
Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60
Query: 287 NESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
N++ +RF + YYDNRYWTMWKLPMFGC + QVL+E+ A P
Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMFGCTDASQVLKELSPLEFAAP 108
Score = 43.9 bits (102), Expect(2) = 7e-37
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 408 SPAPRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDW 524
SP +P+ +VRL AFD+ KQVQ++ F+VQRP SG W
Sbjct: 101 SPLEFAAPENFVRLAAFDSVKQVQVISFVVQRP-SGSSW 138
[33][TOP]
>UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1
Tax=Parietochloris incisa RepID=B3VSA1_9CHLO
Length = 189
Score = 155 bits (391), Expect = 3e-36
Identities = 78/139 (56%), Positives = 99/139 (71%), Gaps = 5/139 (3%)
Frame = +2
Query: 29 AVARPARSSVRPMAALKPAVNAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLPPLS 193
A A PARS + AL PA AA A +N QMMVW P NN+ FET S+LPPL+
Sbjct: 17 ASAAPARS----LKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLT 71
Query: 194 DEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFG 373
D+QIA QVDY++ NGW+PCLEF+E++ AYV++++ IR+G+V+ Y DNRYWTM+KLPMFG
Sbjct: 72 DDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQDNRYWTMFKLPMFG 131
Query: 374 CREPMQVLREIVACTKAFP 430
C +P QVL EI K FP
Sbjct: 132 CTDPGQVLTEIANAEKCFP 150
[34][TOP]
>UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Euglena gracilis RepID=Q9STC5_EUGGR
Length = 271
Score = 154 bits (390), Expect = 4e-36
Identities = 72/124 (58%), Positives = 86/124 (69%)
Frame = +2
Query: 65 MAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 244
MA +KP V A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G
Sbjct: 116 MAMMKPKV--AAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173
Query: 245 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKA 424
PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC + QVLREI C +A
Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233
Query: 425 FPGC 436
+P C
Sbjct: 234 YPQC 237
[35][TOP]
>UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1
Tax=Euglena gracilis RepID=RBS_EUGGR
Length = 1273
Score = 154 bits (390), Expect = 4e-36
Identities = 72/124 (58%), Positives = 86/124 (69%)
Frame = +2
Query: 65 MAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 244
MA +KP V A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G
Sbjct: 116 MAMMKPKV--AAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173
Query: 245 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKA 424
PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC + QVLREI C +A
Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233
Query: 425 FPGC 436
+P C
Sbjct: 234 YPQC 237
Score = 153 bits (387), Expect = 9e-36
Identities = 73/139 (52%), Positives = 93/139 (66%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS + ++ +AA +M VW PVNNK FETFSYLPPLSD
Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 937
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 938 DASQVLREISECRRAYPQC 956
Score = 152 bits (385), Expect = 2e-35
Identities = 73/139 (52%), Positives = 90/139 (64%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS +AA +M VW PVNNK FETFSYLPPLSD
Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1224
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 1225 DASQVLREISECRRAYPQC 1243
Score = 152 bits (384), Expect = 2e-35
Identities = 73/139 (52%), Positives = 91/139 (65%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS ++ +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 733 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 792
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 793 DASQVLREISECRRAYPQC 811
Score = 152 bits (383), Expect = 3e-35
Identities = 73/139 (52%), Positives = 89/139 (64%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 362
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 363 DASQVLREISECRRAYPQC 381
Score = 152 bits (383), Expect = 3e-35
Identities = 73/139 (52%), Positives = 89/139 (64%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 649
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 650 DASQVLREISECRRAYPQC 668
Score = 152 bits (383), Expect = 3e-35
Identities = 73/139 (52%), Positives = 89/139 (64%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 971 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC
Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1080
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 1081 DASQVLREISECRRAYPQC 1099
Score = 150 bits (379), Expect = 8e-35
Identities = 72/139 (51%), Positives = 90/139 (64%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 199
+S V RP+ SS ++ +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445
Query: 200 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 379
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDN YWTMWKLPMFGC
Sbjct: 446 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCT 505
Query: 380 EPMQVLREIVACTKAFPGC 436
+ QVLREI C +A+P C
Sbjct: 506 DASQVLREISECRRAYPQC 524
[36][TOP]
>UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(Fragment) n=1 Tax=Acetabularia acetabulum
RepID=Q8S322_ACEAT
Length = 126
Score = 128 bits (322), Expect(2) = 1e-35
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 170 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 349
+S+LPPL+DEQI+ QVDYI+AN W CLEFA SD+AY N++ IR V+ Y DNRYWT
Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60
Query: 350 MWKLPMFGCREPMQVLREIVACTKAFP 430
MWKLPMFGC + QVL EI ACT AFP
Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTNAFP 87
Score = 46.2 bits (108), Expect(2) = 1e-35
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRDWQTDNKRSV 548
PDAY+R + FD +QVQI GFLV RP S D++ R V
Sbjct: 87 PDAYIRFVCFDAYRQVQISGFLVHRPPSATDYRLPADRQV 126
[37][TOP]
>UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
sp. RCC299 RepID=C1E329_9CHLO
Length = 191
Score = 151 bits (381), Expect = 5e-35
Identities = 71/134 (52%), Positives = 89/134 (66%), Gaps = 4/134 (2%)
Frame = +2
Query: 65 MAALKPAVNAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 235
++A+ P +N APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N
Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63
Query: 236 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVA 412
GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL+EI A
Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123
Query: 413 CTKAFPGCLRAPAG 454
CT AFP C AG
Sbjct: 124 CTSAFPDCFIRVAG 137
[38][TOP]
>UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
sp. RCC299 RepID=C1E330_9CHLO
Length = 179
Score = 150 bits (380), Expect = 6e-35
Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 4/134 (2%)
Frame = +2
Query: 65 MAALKPAVNAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 235
++A+ P +N APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N
Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63
Query: 236 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVA 412
GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL+EI A
Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123
Query: 413 CTKAFPGCLRAPAG 454
CT+AFP C AG
Sbjct: 124 CTQAFPECFIRVAG 137
[39][TOP]
>UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T9D5_PHYPA
Length = 182
Score = 129 bits (325), Expect(2) = 2e-34
Identities = 68/150 (45%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKP-------AVNAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S+A + +SV+ + LK A + + V ++ M VW P+ FE
Sbjct: 15 AFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ G IPCLEF V+ + R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 129 TMWKLPMFGCQDSSQVLREIEECKKTFPGC 158
Score = 40.4 bits (93), Expect(2) = 2e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRILGFDNVKQVQICGFLVARP 181
[40][TOP]
>UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I5_9CHLO
Length = 186
Score = 148 bits (374), Expect = 3e-34
Identities = 71/138 (51%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 223
A SV P+ A PAV+ + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 224 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLR 400
++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 401 EIVACTKAFPGCLRAPAG 454
E+ ACT+AFP C AG
Sbjct: 120 EVRACTRAFPDCFIRVAG 137
[41][TOP]
>UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I4_9CHLO
Length = 183
Score = 148 bits (374), Expect = 3e-34
Identities = 71/138 (51%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 223
A SV P+ A PAV+ + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 224 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLR 400
++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 401 EIVACTKAFPGCLRAPAG 454
E+ ACT+AFP C AG
Sbjct: 120 EVRACTRAFPDCFIRVAG 137
[42][TOP]
>UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I3_9CHLO
Length = 204
Score = 148 bits (374), Expect = 3e-34
Identities = 71/138 (51%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Frame = +2
Query: 44 ARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 223
A SV P+ A PAV+ + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 224 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLR 400
++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 401 EIVACTKAFPGCLRAPAG 454
E+ ACT+AFP C AG
Sbjct: 120 EVRACTRAFPDCFIRVAG 137
[43][TOP]
>UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U4X7_PHYPA
Length = 182
Score = 129 bits (324), Expect(2) = 4e-34
Identities = 70/150 (46%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQ-------MMVWTPVNNKMFE 166
A ++ S+AV+ SSV+ + LK A + A + Q M VW P+ FE
Sbjct: 15 AFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 158
Score = 40.0 bits (92), Expect(2) = 4e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRVLGFDNVKQVQICGFLVARP 181
[44][TOP]
>UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S3R8_PHYPA
Length = 181
Score = 129 bits (323), Expect(2) = 5e-34
Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S+ V+ +SV+ + LK A + V ++ N M VW P+ FE
Sbjct: 15 AFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF S N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS-------SPGYYDGRYW 127
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 128 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 157
Score = 40.0 bits (92), Expect(2) = 5e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180
[45][TOP]
>UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U4X8_PHYPA
Length = 182
Score = 128 bits (322), Expect(2) = 7e-34
Identities = 70/150 (46%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQ-------MMVWTPVNNKMFE 166
A ++ S+AV SSV+ + LK A + A + Q M VW P+ FE
Sbjct: 15 AFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 158
Score = 40.0 bits (92), Expect(2) = 7e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRVLGFDNVKQVQICGFLVARP 181
[46][TOP]
>UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TWU8_PHYPA
Length = 183
Score = 128 bits (321), Expect(2) = 9e-34
Identities = 69/150 (46%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKP-------AVNAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S+AV+ SSV+ + LK A + V ++ M VW P+ FE
Sbjct: 17 AFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 76
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YYD RYW
Sbjct: 77 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYYDGRYW 129
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC + QVLREI C K FPGC
Sbjct: 130 TMWKLPMFGCNDSAQVLREIEECKKTFPGC 159
Score = 40.0 bits (92), Expect(2) = 9e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 157 PGCFVRVLGFDNVKQVQICGFLVARP 182
[47][TOP]
>UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SRS0_PHYPA
Length = 182
Score = 128 bits (321), Expect(2) = 9e-34
Identities = 69/150 (46%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKP-------AVNAAPVAAPAQANQMMVWTPVNNKMFE 166
A S+ S+AV+ +SV+ + LK A + V ++ M VW P+ FE
Sbjct: 15 ALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSRANNSSPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 158
Score = 40.0 bits (92), Expect(2) = 9e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRVLGFDNVKQVQICGFLVARP 181
[48][TOP]
>UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RJ57_PHYPA
Length = 181
Score = 128 bits (321), Expect(2) = 9e-34
Identities = 67/150 (44%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S A + ++V+ + LK A N++ V ++ M VW P+ FE
Sbjct: 15 AFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYYDGRYW 127
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 128 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 157
Score = 40.0 bits (92), Expect(2) = 9e-34
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 155 PGCFVRVLGFDNVKQVQICGFLVARP 180
[49][TOP]
>UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SCN2_PHYPA
Length = 182
Score = 127 bits (320), Expect(2) = 1e-33
Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 7/147 (4%)
Frame = +2
Query: 17 SVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFETFS 175
+ S++V+ +SV+ + LK A + V ++ M VW P+ FETFS
Sbjct: 18 AASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQCMQVWNPIGQTKFETFS 77
Query: 176 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 355
YLPPLSD+ IA QV+Y++ IPCLEF V++ R + S YYD RYWTMW
Sbjct: 78 YLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSRANNSSPGYYDGRYWTMW 131
Query: 356 KLPMFGCREPMQVLREIVACTKAFPGC 436
KLPMFGC++ QVLREI C K FPGC
Sbjct: 132 KLPMFGCQDSAQVLREIEECKKTFPGC 158
Score = 40.0 bits (92), Expect(2) = 1e-33
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRVLGFDNVKQVQICGFLVARP 181
[50][TOP]
>UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RG04_PHYPA
Length = 184
Score = 125 bits (314), Expect(2) = 2e-33
Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Frame = +2
Query: 23 SAAVARPARSSVRPMAALKPAV----NAAPVAAPAQANQ---MMVWTPVNNKMFETFSYL 181
S+ V+ +SV+ + LK NA +++ ++ M VW P+ FETFSYL
Sbjct: 22 SSGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSRVQCMQVWNPIGMTKFETFSYL 81
Query: 182 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 361
PPLSD+ IA QV+Y++ IPCLEF V++ R + S YYD RYWTMWKL
Sbjct: 82 PPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSRVNNSSPGYYDGRYWTMWKL 135
Query: 362 PMFGCREPMQVLREIVACTKAFPGC 436
PMFGC++ QVLREI C K FPGC
Sbjct: 136 PMFGCQDSAQVLREIEECKKTFPGC 160
Score = 41.6 bits (96), Expect(2) = 2e-33
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P YVR+L FDN KQVQI GFLV RP
Sbjct: 158 PGCYVRVLGFDNVKQVQICGFLVARP 183
[51][TOP]
>UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U377_PHYPA
Length = 182
Score = 126 bits (317), Expect(2) = 3e-33
Identities = 68/150 (45%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ SA+V +SV+ + LK A + V ++ M VW P+ FE
Sbjct: 15 AFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 158
Score = 40.0 bits (92), Expect(2) = 3e-33
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCFVRVLGFDNVKQVQICGFLVARP 181
[52][TOP]
>UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S8M9_PHYPA
Length = 182
Score = 124 bits (312), Expect(2) = 3e-33
Identities = 68/150 (45%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV----NAAPVAAPAQANQ---MMVWTPVNNKMFE 166
A + S+ V+ +SV+ + LK A NA +++ ++ M VW P+ FE
Sbjct: 16 AFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIGMTKFE 75
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S S YYD RYW
Sbjct: 76 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-------SPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKTTFPGC 158
Score = 41.6 bits (96), Expect(2) = 3e-33
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P YVR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCYVRVLGFDNVKQVQICGFLVARP 181
[53][TOP]
>UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S8M6_PHYPA
Length = 182
Score = 124 bits (312), Expect(2) = 3e-33
Identities = 68/150 (45%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV----NAAPVAAPAQANQ---MMVWTPVNNKMFE 166
A + S+ V+ +SV+ + LK A NA +++ ++ M VW P+ FE
Sbjct: 16 AFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIGMTKFE 75
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S S YYD RYW
Sbjct: 76 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-------SPGYYDGRYW 128
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C FPGC
Sbjct: 129 TMWKLPMFGCQDSAQVLREIEECKTTFPGC 158
Score = 41.6 bits (96), Expect(2) = 3e-33
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P YVR+L FDN KQVQI GFLV RP
Sbjct: 156 PGCYVRVLGFDNVKQVQICGFLVARP 181
[54][TOP]
>UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TVU8_PHYPA
Length = 176
Score = 124 bits (311), Expect(2) = 4e-33
Identities = 66/150 (44%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S+ ++ +S + LK A + V ++ M VW P+ FE
Sbjct: 10 AFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVWNPIGQTKFE 69
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S S YYD RYW
Sbjct: 70 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-------SPGYYDGRYW 122
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++ QVLREI C K FPGC
Sbjct: 123 TMWKLPMFGCQDSAQVLREIEECKKTFPGC 152
Score = 41.6 bits (96), Expect(2) = 4e-33
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P YVR+L FDN KQVQI GFLV RP
Sbjct: 150 PGCYVRVLGFDNVKQVQICGFLVARP 175
[55][TOP]
>UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY
Length = 82
Score = 144 bits (363), Expect = 6e-33
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2
Query: 134 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 313
VW PVNNK FETFSYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+
Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60
Query: 314 VSCLYYDNRYWTMWKLPMFGC 376
VS Y DNRYWTMWKLPMFGC
Sbjct: 61 VSVGYQDNRYWTMWKLPMFGC 81
[56][TOP]
>UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=Q75WT7_PHYPA
Length = 184
Score = 126 bits (316), Expect(2) = 6e-33
Identities = 69/148 (46%), Positives = 86/148 (58%), Gaps = 7/148 (4%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFETF 172
+S S A +R + SSV+ + LK A + V ++ M VW P+ FETF
Sbjct: 18 ASSSVAASRES-SSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETF 76
Query: 173 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 352
SYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YYD RYWTM
Sbjct: 77 SYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYYDGRYWTM 132
Query: 353 WKLPMFGCREPMQVLREIVACTKAFPGC 436
WKLPMFGC + QVLREI C ++P C
Sbjct: 133 WKLPMFGCTDSSQVLREIQECKTSYPSC 160
Score = 39.3 bits (90), Expect(2) = 6e-33
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 158 PSCWVRVLGFDSKKQVQICGFLVARP 183
[57][TOP]
>UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TCL7_PHYPA
Length = 184
Score = 125 bits (315), Expect(2) = 6e-33
Identities = 65/148 (43%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMFETF 172
++ S+ A ++V+ + LKPA V ++ M VW P+ FETF
Sbjct: 17 AAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETF 76
Query: 173 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 352
SYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S YYD RYWTM
Sbjct: 77 SYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGRYWTM 132
Query: 353 WKLPMFGCREPMQVLREIVACTKAFPGC 436
WKLPMFGC + QVLREI C FP C
Sbjct: 133 WKLPMFGCTDSSQVLREIQECKSQFPSC 160
Score = 39.7 bits (91), Expect(2) = 6e-33
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 158 PSCWVRVLGFDSKKQVQICGFLVSRP 183
[58][TOP]
>UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA
Length = 214
Score = 125 bits (314), Expect(2) = 8e-33
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Frame = +2
Query: 8 AKSSVSAAVARPARSS-VRPMAALKPAV-------NAAPVAAPAQANQMMVWTPVNNKMF 163
A S+ V P+ SS V+ + LK A + V ++ M VW P+ F
Sbjct: 44 ALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKF 103
Query: 164 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 343
ETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S YYD RY
Sbjct: 104 ETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGRY 159
Query: 344 WTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
WTMWKLPMFGC + QVLREI C FP C
Sbjct: 160 WTMWKLPMFGCTDSSQVLREIQECKSQFPSC 190
Score = 39.7 bits (91), Expect(2) = 8e-33
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 188 PSCWVRVLGFDSKKQVQICGFLVSRP 213
[59][TOP]
>UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TT85_PHYPA
Length = 183
Score = 123 bits (309), Expect(2) = 3e-32
Identities = 69/151 (45%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Frame = +2
Query: 20 VSAAVARPAR-----SSVRPMAALKPAVNAAPVAAPAQANQ-------MMVWTPVNNKMF 163
VS A A PA +SV+ + LK A + A + Q M VW P+ F
Sbjct: 13 VSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKF 72
Query: 164 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 343
ETFSYLPPL+D++IA QVDY++ IPC+EF +N S G+ S YYD RY
Sbjct: 73 ETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGRY 128
Query: 344 WTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
WTMWKLPMFGC + QVLREI C FP C
Sbjct: 129 WTMWKLPMFGCTDSSQVLREIQECKTQFPSC 159
Score = 39.7 bits (91), Expect(2) = 3e-32
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 157 PSCWVRVLGFDSKKQVQICGFLVSRP 182
[60][TOP]
>UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PI67_POPTR
Length = 170
Score = 122 bits (305), Expect(2) = 6e-32
Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Frame = +2
Query: 23 SAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQ-------MMVWTPVNNKMFETFSYL 181
++AVA P +R + +P VA ++ M W P+NNK FE SYL
Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67
Query: 182 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 361
PPLS++ IA ++DY++ GWIPCLEF E V E + G YYD RYWT+WKL
Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVGS--VRREHSRMPG-----YYDGRYWTLWKL 120
Query: 362 PMFGCREPMQVLREIVACTKAFP 430
PMFGC + QVL EI C KA+P
Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYP 143
Score = 40.0 bits (92), Expect(2) = 6e-32
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAY+R LAFDN+ Q Q M F++Q+P
Sbjct: 143 PDAYIRCLAFDNKHQGQCMAFVIQKP 168
[61][TOP]
>UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T3W5_PHYPA
Length = 179
Score = 122 bits (306), Expect(2) = 8e-32
Identities = 67/144 (46%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Frame = +2
Query: 26 AAVARPARSSVRPMAALKP-------AVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
AAV R + SSV+ + LK A + V ++ M VW P+ FETFSYLP
Sbjct: 17 AAVCRES-SSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLP 75
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+D+QIA QVD+++ IPC+EF +N S G S YYD RYWTMWKLP
Sbjct: 76 PLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSSGYYDGRYWTMWKLP 131
Query: 365 MFGCREPMQVLREIVACTKAFPGC 436
MFGC + QVLREI C ++FP C
Sbjct: 132 MFGCTDSAQVLREIQECKQSFPSC 155
Score = 39.3 bits (90), Expect(2) = 8e-32
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 153 PSCWVRVLGFDSKKQVQICGFLVARP 178
[62][TOP]
>UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T3X7_PHYPA
Length = 179
Score = 122 bits (305), Expect(2) = 1e-31
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Frame = +2
Query: 26 AAVARPARSSVRPMAALKPAVNAAPVAAP-------AQANQMMVWTPVNNKMFETFSYLP 184
A+V R + SSV+ + LK +A A ++ M VW P+ FETFSYLP
Sbjct: 17 ASVCRES-SSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLP 75
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+D+QIA QVD+++ IPC+EF +N S G S YYD RYWTMWKLP
Sbjct: 76 PLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSSGYYDGRYWTMWKLP 131
Query: 365 MFGCREPMQVLREIVACTKAFPGC 436
MFGC + QVLREI C ++FP C
Sbjct: 132 MFGCTDSAQVLREIQECKQSFPSC 155
Score = 39.3 bits (90), Expect(2) = 1e-31
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +VR+L FD++KQVQI GFLV RP
Sbjct: 153 PSCWVRVLGFDSKKQVQICGFLVARP 178
[63][TOP]
>UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis
vinifera RepID=A7Q6D7_VITVI
Length = 169
Score = 122 bits (306), Expect(2) = 1e-31
Identities = 60/130 (46%), Positives = 76/130 (58%)
Frame = +2
Query: 41 PARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVD 220
PA+ SV A + V+ ++ + M W P+NNK FET SYLPPLSD+ IA ++D
Sbjct: 27 PAKDSV--------AWSRKTVSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEID 78
Query: 221 YIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLR 400
Y++ GWIPCLEF E + N YYD RYWT+WKLPMFGC + QVL
Sbjct: 79 YMLKKGWIPCLEFDEVGYVFRKNSQIPG-------YYDGRYWTLWKLPMFGCNDASQVLN 131
Query: 401 EIVACTKAFP 430
EI C K +P
Sbjct: 132 EIHECKKTYP 141
Score = 38.5 bits (88), Expect(2) = 1e-31
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+AY+R LAFDN+ Q Q M F++Q+P
Sbjct: 141 PNAYIRCLAFDNEHQGQCMAFVIQKP 166
[64][TOP]
>UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x
giganteus RepID=B6RHQ3_9POAL
Length = 169
Score = 122 bits (307), Expect(2) = 5e-31
Identities = 59/141 (41%), Positives = 81/141 (57%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A +P + A V+ + M VW NK FET SYLPP
Sbjct: 7 ASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 67 LTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV +E+ ++P
Sbjct: 120 FGCTDASQVYKELQEAIASYP 140
Score = 36.2 bits (82), Expect(2) = 5e-31
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR+L FDN +Q Q + F+ +P
Sbjct: 140 PDAYVRILGFDNIRQTQCVSFIAYKP 165
[65][TOP]
>UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4SA22_OSTLU
Length = 169
Score = 137 bits (345), Expect = 7e-31
Identities = 65/136 (47%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Frame = +2
Query: 50 SSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 229
S++ +A A A A MM+W P NKMFETFS+LPPLSD +I+ QV Y++
Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61
Query: 230 ANGWIPCLEFAESDKAYVSNES-AIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREI 406
NGW PC+EF +S AY A S++ YYDNRYW MWKLPM+GC+ P +V+ EI
Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121
Query: 407 VACTKAFPGCLRAPAG 454
C K FP C AG
Sbjct: 122 NTCIKCFPDCYVRVAG 137
[66][TOP]
>UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TWX2_PHYPA
Length = 182
Score = 117 bits (294), Expect(2) = 9e-31
Identities = 58/103 (56%), Positives = 66/103 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ FETFSYLPPLSDE IA QV+Y++ IPCLEF + K VS ++
Sbjct: 62 MQVWNPIGMTKFETFSYLPPLSDEAIAKQVEYMIQQKLIPCLEFDLNSKG-VSRDNNSSP 120
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
G YYD RYWTMWKLPMFGC + QVLREI C FP C
Sbjct: 121 G-----YYDGRYWTMWKLPMFGCNDSAQVLREIQECKTTFPNC 158
Score = 40.4 bits (93), Expect(2) = 9e-31
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ +VR+L FDN KQVQI GFLV RP
Sbjct: 156 PNCWVRVLGFDNVKQVQICGFLVARP 181
[67][TOP]
>UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6T529_SOYBN
Length = 172
Score = 117 bits (294), Expect(2) = 2e-30
Identities = 53/101 (52%), Positives = 63/101 (62%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M W P+NNK FET SYLPPLSDE IA ++DY++ GWIPCLEF E N
Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYWT+WKLPMF C + QVL+EI C + +P
Sbjct: 107 ------YYDGRYWTLWKLPMFACSDSSQVLKEIHECRRVYP 141
Score = 39.3 bits (90), Expect(2) = 2e-30
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 420 RPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
R P+AY+R LAFDNQ+ +Q M F+V +P
Sbjct: 138 RVYPNAYIRCLAFDNQRHMQSMAFIVHKP 166
[68][TOP]
>UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum
bicolor RepID=C5Y519_SORBI
Length = 169
Score = 119 bits (299), Expect(2) = 2e-30
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A + + A V+ + M VW NK FET SYLPP
Sbjct: 7 ASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 67 LTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV +E+ ++P
Sbjct: 120 FGCTDASQVYKELQEAIASYP 140
Score = 37.4 bits (85), Expect(2) = 2e-30
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR+L FDN KQ Q + F+ +P
Sbjct: 140 PDAYVRILGFDNIKQTQCVSFIAYKP 165
[69][TOP]
>UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa
RepID=Q33BU5_CHLPY
Length = 124
Score = 135 bits (340), Expect = 3e-30
Identities = 64/121 (52%), Positives = 76/121 (62%), Gaps = 13/121 (10%)
Frame = +2
Query: 176 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 355
YLPPL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMW
Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60
Query: 356 KLPMFGCREPMQVLREIVACTKAFPGCLRAPAG-------------LRQPEAGADHGLPG 496
KLPMFGC + QVL E+ C +AFP G + +P + DH P
Sbjct: 61 KLPMFGCTDGHQVLAEVSNCRRAFPDAYIRLVGFDPVRQVQVAGFLVHRPPSARDHQSPA 120
Query: 497 T 499
T
Sbjct: 121 T 121
[70][TOP]
>UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer
arietinum RepID=Q9ZP07_CICAR
Length = 181
Score = 119 bits (299), Expect(2) = 1e-29
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 16/152 (10%)
Frame = +2
Query: 23 SAAVARPARSSVRPMAALKPAVNAAPVAA----------------PAQANQMMVWTPVNN 154
S+AV R+S P A+ P V +A + + M VW P+
Sbjct: 8 SSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGK 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF E +K +V E G YYD
Sbjct: 68 KKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNNSPG-----YYD 121
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLP+FGC E +QVL+E+ KA+P
Sbjct: 122 GRYWTMWKLPLFGCTEAVQVLKELQEVVKAYP 153
Score = 35.0 bits (79), Expect(2) = 1e-29
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+A+VR++ FDN +QVQ + F+ PK
Sbjct: 153 PNAFVRIIGFDNVRQVQCISFIAHTPK 179
[71][TOP]
>UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TKI7_PHYPA
Length = 181
Score = 133 bits (335), Expect = 1e-29
Identities = 71/150 (47%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKP-------AVNAAPVAAPAQANQMMVWTPVNNKMFE 166
A ++ S+AV+ +SV+ + LK A + + V ++ M VW P+ FE
Sbjct: 15 AFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
TFSYLPPLSD+ IA QVDY++ IPCLEF +D +N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS-------SPGYYDGRYW 127
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFPGC 436
TMWKLPMFGC++P QVLREI C K FPGC
Sbjct: 128 TMWKLPMFGCQDPAQVLREIEECKKTFPGC 157
[72][TOP]
>UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9S5G3_RICCO
Length = 181
Score = 120 bits (300), Expect(2) = 1e-29
Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNN 154
SS S + + PA+++ V P LK A + PV A + M VW P+
Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAASF-PVTRKANNDITSIASNGGRVQCMQVWPPLGK 65
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLP L+DEQ+A +VDY++ GWIPCLEF E + +V E+ G YYD
Sbjct: 66 KKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEF-ELEHGFVYRENHRSPG-----YYD 119
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKELDEAKKAYP 151
Score = 34.3 bits (77), Expect(2) = 1e-29
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P++++R++ FDN++QVQ + F+ +P
Sbjct: 146 AKKAYPNSFIRIIGFDNRRQVQCISFIAYKP 176
[73][TOP]
>UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Betula pendula RepID=RBS_BETVE
Length = 182
Score = 117 bits (294), Expect(2) = 2e-29
Identities = 71/154 (46%), Positives = 88/154 (57%), Gaps = 15/154 (9%)
Frame = +2
Query: 14 SSVSAAVAR--PARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPV 148
S+ AAV+R PA+SS V P LK + +A PV + M VW P+
Sbjct: 8 SATVAAVSRASPAQSSMVAPFTCLK-STSAFPVTQKTNNDITSIASNGGRVQCMQVWPPL 66
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E G Y
Sbjct: 67 GLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSPG-----Y 120
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC + QVL+E+ C KA+P
Sbjct: 121 YDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYP 154
Score = 36.2 bits (82), Expect(2) = 2e-29
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN++QVQI+ F+ +P
Sbjct: 154 PSAFIRIIGFDNKRQVQIISFIAYKP 179
[74][TOP]
>UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris
vittata RepID=Q43110_PTEVI
Length = 174
Score = 116 bits (290), Expect(2) = 2e-29
Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Frame = +2
Query: 8 AKSSVSA-AVARPARSSVRPMAALKPAVNAAPVAAPAQA-------NQMMVWTPVNNKMF 163
A +VSA + A A S + + LK AP A A + M+VW P +NK F
Sbjct: 6 AAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKF 65
Query: 164 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 343
ET SYLPPL+++QIA QV+Y+V GW PC+EF Y R YYD RY
Sbjct: 66 ETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVY-------REHFHGSGYYDGRY 118
Query: 344 WTMWKLPMFGCREPMQVLREIVACTKAFP 430
W MWKLPMFGC + VLREI C K +P
Sbjct: 119 WIMWKLPMFGCTDSGSVLREIAECAKEYP 147
Score = 37.4 bits (85), Expect(2) = 2e-29
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R+L FD ++QVQ+ GFLV++P
Sbjct: 147 PTAFIRVLGFDAKRQVQVAGFLVKKP 172
[75][TOP]
>UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=RBS1A_ARATH
Length = 180
Score = 118 bits (295), Expect(2) = 3e-29
Identities = 67/156 (42%), Positives = 89/156 (57%), Gaps = 15/156 (9%)
Frame = +2
Query: 8 AKSSVSAA--VARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWT 142
A S +S+A VA PA+++ V P LK + A P A + N M VW
Sbjct: 2 ASSMLSSATMVASPAQATMVAPFNGLKSSA-AFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 143 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 322
P+ K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEF-ELEHGFVYREHGNSPG---- 115
Query: 323 LYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYWTMWKLP+FGC + QVL+E+ C K +P
Sbjct: 116 -YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYP 150
Score = 35.0 bits (79), Expect(2) = 3e-29
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNTRQVQCISFIAYKPPS 177
[76][TOP]
>UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x
giganteus RepID=B6RHQ4_9POAL
Length = 169
Score = 117 bits (292), Expect(2) = 3e-29
Identities = 58/141 (41%), Positives = 79/141 (56%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A + + A V+ + M VW NK FET SYLPP
Sbjct: 7 ASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 67 LTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV +E ++P
Sbjct: 120 FGCTDASQVYKEPQEAIASYP 140
Score = 36.2 bits (82), Expect(2) = 3e-29
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR+L FDN +Q Q + F+ +P
Sbjct: 140 PDAYVRILGFDNIRQTQCVSFIAYKP 165
[77][TOP]
>UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS2B_ARATH
Length = 181
Score = 118 bits (296), Expect(2) = 4e-29
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + + PV A + + M VW P+ K
Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSASF-PVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
RYWTMWKLP+FGC + QVL+E+ C K +PG
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPG 151
Score = 34.3 bits (77), Expect(2) = 4e-29
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PGAFIRIIGFDNTRQVQCISFIAYKPPS 177
[78][TOP]
>UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
tauri RepID=Q00SG4_OSTTA
Length = 168
Score = 131 bits (330), Expect = 4e-29
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 292
A A MM+W P NKMFETFS+LPPLSD +IA Q Y++ NGW PC+EF +++ AY
Sbjct: 22 ANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGH 81
Query: 293 SAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
S++ LYYDNRYW MWKLPM+GC+ +VL E+ K FP C
Sbjct: 82 GWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDC 130
[79][TOP]
>UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS3B_ARATH
Length = 181
Score = 118 bits (295), Expect(2) = 5e-29
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
RYWTMWKLP+FGC + QVL+E+ C K +PG
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPG 151
Score = 34.3 bits (77), Expect(2) = 5e-29
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PGAFIRIIGFDNTRQVQCISFIAYKPPS 177
[80][TOP]
>UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS1B_ARATH
Length = 181
Score = 117 bits (293), Expect(2) = 5e-29
Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + + PV A + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSASF-PVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
RYWTMWKLP+FGC + QVL+E+ C K +PG
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPG 151
Score = 35.0 bits (79), Expect(2) = 5e-29
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRD 521
P A++R++ FDN +QVQ + F+ +P S D
Sbjct: 150 PGAFIRIIGFDNTRQVQCISFIAYKPPSFTD 180
[81][TOP]
>UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Medicago sativa RepID=RBS_MEDSA
Length = 180
Score = 116 bits (291), Expect(2) = 5e-29
Identities = 53/105 (50%), Positives = 70/105 (66%)
Frame = +2
Query: 116 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 295
+ N M VW PV K FET SYLPPL++EQ+A +V+Y++ GWIPCLEF E +K +V E+
Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEF-ELEKGFVYREN 112
Query: 296 AIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMW+LP+FG + QVL+E+ C +P
Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYP 152
Score = 35.8 bits (81), Expect(2) = 5e-29
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
PD+++R++ FDN +QVQ + F+ PK+
Sbjct: 152 PDSFIRIIGFDNVRQVQCISFIAHTPKN 179
[82][TOP]
>UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9T1N0_RICCO
Length = 185
Score = 116 bits (290), Expect(2) = 6e-29
Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 13/145 (8%)
Frame = +2
Query: 35 ARPARSS-VRPMAALKPAVNAAPVAAPAQ------ANQ------MMVWTPVNNKMFETFS 175
A PA++S V P LK + +A PV AN M VW P+ K FET S
Sbjct: 17 ASPAQASMVAPFTGLK-STSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLS 75
Query: 176 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 355
YLP L+ EQ+A +V+Y++ GW+PCLEF E + +V E+A G YYD RYWTMW
Sbjct: 76 YLPDLTREQLAKEVEYLLRKGWVPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMW 129
Query: 356 KLPMFGCREPMQVLREIVACTKAFP 430
KLPMFGC + +QVL+E+ KA+P
Sbjct: 130 KLPMFGCSDAVQVLKELDEAIKAYP 154
Score = 35.8 bits (81), Expect(2) = 6e-29
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRD 521
P+++VR++ FDN +QVQ + F+ +P S +D
Sbjct: 154 PNSFVRIIGFDNVRQVQCISFIAYKPPSFKD 184
[83][TOP]
>UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea
arabica RepID=Q8GRJ7_COFAR
Length = 181
Score = 118 bits (295), Expect(2) = 6e-29
Identities = 65/155 (41%), Positives = 87/155 (56%), Gaps = 17/155 (10%)
Frame = +2
Query: 23 SAAVARPARSS------VRPMAALKPAVNAAPVAAPA-----------QANQMMVWTPVN 151
SAAVA R+S V P LK A ++ P++ + + M VW P
Sbjct: 8 SAAVATTTRASPAQASMVAPFNGLK-AASSFPISKKSVDITSLATNGGRVQCMQVWPPRG 66
Query: 152 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 331
K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G YY
Sbjct: 67 LKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG-----YY 120
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
D RYWTMWKLPM+GC + QVL E+ C K +P C
Sbjct: 121 DGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNC 155
Score = 33.9 bits (76), Expect(2) = 6e-29
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+ +VR++ FDN +QVQ + F+ +PK
Sbjct: 153 PNCWVRIIGFDNVRQVQCISFIAAKPK 179
[84][TOP]
>UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng
RepID=Q3LFQ4_PANGI
Length = 183
Score = 116 bits (290), Expect(2) = 8e-29
Identities = 68/153 (44%), Positives = 90/153 (58%), Gaps = 14/153 (9%)
Frame = +2
Query: 14 SSVSAAVAR--PARSS-VRPMAALKPAVNAAPV--------AAPAQANQ---MMVWTPVN 151
S+ AAV+R PA++S V P LK A PV + P+ + M VW P+
Sbjct: 8 SATVAAVSRAVPAQASMVAPFTGLKSTA-AFPVTRKVNDITSLPSNGGRVQCMKVWPPLG 66
Query: 152 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 331
K FET SYLP L+ EQ++ +VDY++ +GW+PCLEF E + +V E G YY
Sbjct: 67 LKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEF-ELEHGFVYREHHHSPG-----YY 120
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
D RYWTMWKLPMFGC + QVL+E+ C K +P
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYP 153
Score = 35.4 bits (80), Expect(2) = 8e-29
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+AY+R++ FDN +QVQ + F+ +P S
Sbjct: 153 PNAYIRIIGFDNVRQVQCISFIAFKPPS 180
[85][TOP]
>UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia
sinensis RepID=A0FIP7_CAMSI
Length = 176
Score = 119 bits (297), Expect(2) = 8e-29
Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 13/154 (8%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAP------------AQANQMMVWTPV 148
A S +S+AV PA++S+ P LK + +A PV + M VW P+
Sbjct: 2 AASIISSAVVAPAQASMAAPFTGLK-STSAFPVTRKLDTDITSLASNGGRVQCMKVWPPL 60
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ V R + S Y
Sbjct: 61 GLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFS------VQGGFVYREHNKSPGY 114
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC + QVL+E+ C K +P
Sbjct: 115 YDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYP 148
Score = 32.7 bits (73), Expect(2) = 8e-29
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P +++R++ FDN++QVQ + F+ +P
Sbjct: 148 PQSFIRIIGFDNKRQVQCISFICYKP 173
[86][TOP]
>UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Raphanus sativus RepID=RBS_RAPSA
Length = 181
Score = 116 bits (291), Expect(2) = 1e-28
Identities = 61/143 (42%), Positives = 81/143 (56%)
Frame = +2
Query: 11 KSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 190
KSS + V R + + +A+ N V+ M VW P+ K FET SYLP L
Sbjct: 28 KSSAAFPVTRKTNTDITSIAS-----NGGRVSC------MKVWPPIGKKKFETLSYLPDL 76
Query: 191 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 370
SD ++A +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F
Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 130
Query: 371 GCREPMQVLREIVACTKAFPGCL 439
GC + QVL+E+ C K +P L
Sbjct: 131 GCTDSAQVLKEVQECKKEYPNAL 153
Score = 34.7 bits (78), Expect(2) = 1e-28
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKSGRD 521
P+A +R++ FDN +QVQ + F+ +P S D
Sbjct: 150 PNALIRIIGFDNNRQVQCISFIAYKPPSFTD 180
[87][TOP]
>UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Capsicum annuum RepID=RBS_CAPAN
Length = 187
Score = 116 bits (291), Expect(2) = 1e-28
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E
Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYP 152
Score = 34.3 bits (77), Expect(2) = 1e-28
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
A + P A++R++ FDN +QVQ + F+ +P++
Sbjct: 147 AKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEA 179
[88][TOP]
>UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Zantedeschia aethiopica RepID=RBS_ZANAE
Length = 178
Score = 118 bits (296), Expect(2) = 1e-28
Identities = 53/101 (52%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K FET SYLPPL+ EQ+ +VDY++ NGWIPC+EF + Y +
Sbjct: 57 MQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ C+KA+P
Sbjct: 113 ---SPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYP 150
Score = 32.3 bits (72), Expect(2) = 1e-28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
PD + R++ FDN +QVQ + FL +P+
Sbjct: 150 PDYFNRIIGFDNTRQVQCISFLTYKPE 176
[89][TOP]
>UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Silene latifolia subsp. alba RepID=RBS_SILPR
Length = 177
Score = 114 bits (284), Expect(2) = 1e-28
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNKMF 163
V+A+ A A + V P + LK + +A PV+ + + N M VW P N K F
Sbjct: 11 VTASTAAQA-NMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKKF 68
Query: 164 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 343
ET SYLP LS+E + +++Y++ GW+PCLEF E A+V E+ + S YYD RY
Sbjct: 69 ETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYREN-----NKSPGYYDGRY 122
Query: 344 WTMWKLPMFGCREPMQVLREIVACTKAFP 430
WTMWKLPMFGC + QV E+V C A+P
Sbjct: 123 WTMWKLPMFGCTDASQVAAEVVECKNAYP 151
Score = 37.0 bits (84), Expect(2) = 1e-28
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
PDA+VR++ FDN++QVQ + F+ +P+
Sbjct: 151 PDAHVRIIGFDNKRQVQCISFIAYKPE 177
[90][TOP]
>UniRef100_Q84NG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria
bidentis RepID=Q84NG4_FLABI
Length = 173
Score = 117 bits (294), Expect(2) = 1e-28
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVAR-PARSSVRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA P + V P LK NAA PV P+ + M VW PV
Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK--ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 1e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCVSFIASKP 170
[91][TOP]
>UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2
Tax=Zea mays RepID=RBS_MAIZE
Length = 170
Score = 119 bits (297), Expect(2) = 1e-28
Identities = 60/149 (40%), Positives = 81/149 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A + + + V+ + M VW NK FET SYLPP
Sbjct: 8 ASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPP 67
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 68 LSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKLPM 120
Query: 368 FGCREPMQVLREIVACTKAFPGCLRAPAG 454
FGC + QV +E+ K++P G
Sbjct: 121 FGCNDATQVYKELQEAIKSYPDAFHRVIG 149
Score = 32.0 bits (71), Expect(2) = 1e-28
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDA+ R++ FDN KQ Q + F+ +P
Sbjct: 141 PDAFHRVIGFDNIKQTQCVSFIAYKP 166
[92][TOP]
>UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum
annuum RepID=Q6RWD8_CAPAN
Length = 180
Score = 116 bits (291), Expect(2) = 2e-28
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E
Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYP 152
Score = 33.9 bits (76), Expect(2) = 2e-28
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P A++R++ FDN +QVQ + F+ +P+
Sbjct: 147 AKKAYPQAWIRIIGFDNVRQVQCISFIAYKPE 178
[93][TOP]
>UniRef100_P07089 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Flaveria trinervia RepID=RBS_FLATR
Length = 173
Score = 117 bits (292), Expect(2) = 2e-28
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVAR-PARSSVRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA P + V P LK NAA PV P+ + M VW PV
Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK--ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENASSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 2e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCVSFIASKP 170
[94][TOP]
>UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus
olitorius RepID=A7LIT5_9ROSI
Length = 183
Score = 111 bits (277), Expect(2) = 3e-28
Identities = 53/101 (52%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLP L+ Q+A +VDY++ +GWIPCLEF E + +V E
Sbjct: 58 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEF-ELEHGFVYREHHHSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYP 152
Score = 38.5 bits (88), Expect(2) = 3e-28
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
A + PDA++R++ FDN++QVQ + F+ +P S
Sbjct: 147 AKKAYPDAFIRIIGFDNRRQVQCISFIAYKPPS 179
[95][TOP]
>UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca
sativa RepID=Q9SEB9_LACSA
Length = 181
Score = 116 bits (291), Expect(2) = 3e-28
Identities = 67/154 (43%), Positives = 87/154 (56%), Gaps = 15/154 (9%)
Frame = +2
Query: 14 SSVSAAVAR--PARSSVR-PMAALKPAVNAAPVAAPA------------QANQMMVWTPV 148
SS A V R PA++S+ P LK V A PV A + M VW P+
Sbjct: 6 SSAVATVNRSTPAQASLAAPFTGLKSNV-AFPVTKKANNDFSSLPSNGGRVQCMKVWPPI 64
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K +ET SYLPPLSDE ++ ++DY++ N W+PCLEF E + +V E G Y
Sbjct: 65 GLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEF-ELEHGFVYREHHHSPG-----Y 118
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 119 YDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYP 152
Score = 33.1 bits (74), Expect(2) = 3e-28
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+A++R++ FD+ +QVQ + F+V +P
Sbjct: 152 PNAFIRVIGFDSVRQVQCISFIVSKP 177
[96][TOP]
>UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Lactuca sativa RepID=RBS_LACSA
Length = 181
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K +ET SYLPPLSDE ++ ++DY++ N WIPCLEF E + +V E
Sbjct: 58 MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYP 152
Score = 34.3 bits (77), Expect(2) = 3e-28
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+A++R++ FDN +QVQ + F+V +P
Sbjct: 152 PNAFIRVIGFDNIRQVQCISFIVAKP 177
[97][TOP]
>UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis
thaliana RepID=B3H5S2_ARATH
Length = 186
Score = 115 bits (287), Expect(2) = 4e-28
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP LSD ++A +VDY++ N WIPC+EF E + + R + YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEVINTKHGFVYREHGNTPGYYDG 124
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
RYWTMWKLP+FGC + QVL+E+ C K +PG
Sbjct: 125 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPG 156
Score = 34.3 bits (77), Expect(2) = 4e-28
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A++R++ FDN +QVQ + F+ +P S
Sbjct: 155 PGAFIRIIGFDNTRQVQCISFIAYKPPS 182
[98][TOP]
>UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9T055_RICCO
Length = 180
Score = 115 bits (287), Expect(2) = 4e-28
Identities = 63/144 (43%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Frame = +2
Query: 35 ARPARSSVRPMAALKPAVNAAPVAAP------------AQANQMMVWTPVNNKMFETFSY 178
A P S V P LK + + PV + + M VW PV K FET SY
Sbjct: 16 AAPQASMVAPFTGLKSS-SVFPVTRKQNNDITTLASNGGKVHCMQVWPPVGKKKFETLSY 74
Query: 179 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 358
LPPLS+E +A +VDY++ GW+PCLEF E + +V E+ G YYD R WTMWK
Sbjct: 75 LPPLSEESLAKEVDYLLRMGWVPCLEF-ELEHGFVYRENHRSPG-----YYDGRCWTMWK 128
Query: 359 LPMFGCREPMQVLREIVACTKAFP 430
LPMFGC + QVL+E+ KA+P
Sbjct: 129 LPMFGCTDSSQVLKELEEAKKAYP 152
Score = 34.3 bits (77), Expect(2) = 4e-28
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P++++R++ FDN++QVQ + F+ +P
Sbjct: 147 AKKAYPNSFIRIIGFDNKRQVQCISFIAYKP 177
[99][TOP]
>UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea
brasiliensis RepID=B1PLM0_HEVBR
Length = 183
Score = 113 bits (282), Expect(2) = 5e-28
Identities = 54/103 (52%), Positives = 66/103 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K FETF YLPPL+ EQ+A +V+Y+ GW+PCLEF E + V E
Sbjct: 60 MQVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEF-ELEHGTVYREYHRSP 118
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
G YYD RYWTMWKLPMFGC + +QVL+E+ KA+P C
Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDC 156
Score = 35.8 bits (81), Expect(2) = 5e-28
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
PD Y R++ FDN +QVQ + FL +PK
Sbjct: 154 PDCYGRIIGFDNVRQVQCISFLAYKPK 180
[100][TOP]
>UniRef100_Q39746 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS4_FLAPR
Length = 178
Score = 115 bits (289), Expect(2) = 5e-28
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQ-------------MMVWTPVNN 154
SS A V+R A + +A + A A +AN M VW P+
Sbjct: 5 SSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLGK 64
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 65 KKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 118
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 119 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 150
Score = 33.1 bits (74), Expect(2) = 5e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 150 PQAWIRIIGFDNVRQVQCISFIASKP 175
[101][TOP]
>UniRef100_Q39744 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS2_FLAPR
Length = 178
Score = 115 bits (288), Expect(2) = 5e-28
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVAR--PARSS-VRPMAALK-----PAVNAAPVAAPAQANQ-----MMVWTPVNN 154
SS A V+R PA+++ V P LK PA A + +N M VW P+
Sbjct: 5 SSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLGK 64
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 65 KRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 118
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 119 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 150
Score = 33.5 bits (75), Expect(2) = 5e-28
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P A++R++ FDN +QVQ + F+ +P+
Sbjct: 150 PQAWIRIIGFDNVRQVQCISFIASKPE 176
[102][TOP]
>UniRef100_Q9AQX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Flaveria palmeri RepID=Q9AQX3_FLAPA
Length = 131
Score = 115 bits (289), Expect(2) = 5e-28
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A
Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 103
Score = 33.1 bits (74), Expect(2) = 5e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 103 PQAWIRIIGFDNVRQVQCVSFIASKP 128
[103][TOP]
>UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Hevea brasiliensis RepID=RBS_HEVBR
Length = 183
Score = 112 bits (280), Expect(2) = 8e-28
Identities = 53/103 (51%), Positives = 67/103 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K +ET SYLPPL+ EQ+A +V+Y++ GW+PCLEF E + V E
Sbjct: 60 MQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEF-ELEHGTVYREYHRSP 118
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
G YYD RYWTMWKLPMFGC + +QVL+E+ KA+P C
Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDC 156
Score = 35.8 bits (81), Expect(2) = 8e-28
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
PD Y R++ FDN +QVQ + FL +PK
Sbjct: 154 PDCYGRIIGFDNVRQVQCISFLAYKPK 180
[104][TOP]
>UniRef100_P08705 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Helianthus annuus RepID=RBS_HELAN
Length = 178
Score = 115 bits (287), Expect(2) = 8e-28
Identities = 63/155 (40%), Positives = 89/155 (57%), Gaps = 16/155 (10%)
Frame = +2
Query: 14 SSVSAAVARPARSS------VRPMAALK-----PAVNAAPVAAPAQANQ-----MMVWTP 145
+S+S++VA +R++ V P LK P A + +N M VW P
Sbjct: 2 ASISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPP 61
Query: 146 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 325
+ K +ET SYLPPL++ Q+A +VDY++ W+PCLEF E + +V E+A G
Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEF-ELEHGFVYRENARSPG----- 115
Query: 326 YYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYP 150
Score = 33.1 bits (74), Expect(2) = 8e-28
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ RP
Sbjct: 150 PQAWIRIIGFDNVRQVQCIMFIASRP 175
[105][TOP]
>UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Trifolium repens RepID=RBS_TRIRP
Length = 178
Score = 113 bits (282), Expect(2) = 8e-28
Identities = 50/106 (47%), Positives = 69/106 (65%)
Frame = +2
Query: 113 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 292
++ N M VW PV K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF E +K +V +
Sbjct: 51 SRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEF-ELEKGFVHRQ 109
Query: 293 SAIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMW+LP+FG + QVL+E+ C +P
Sbjct: 110 YNSSPG-----YYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYP 150
Score = 35.0 bits (79), Expect(2) = 8e-28
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+A++R++ FDN +QVQ + F+ PK
Sbjct: 150 PEAFIRIIGFDNVRQVQCISFIASTPK 176
[106][TOP]
>UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1
Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA
Length = 174
Score = 114 bits (284), Expect(2) = 8e-28
Identities = 51/101 (50%), Positives = 67/101 (66%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M+VW P+ K FET SYLPPLS E + +V+Y++ GW+PCLEF E + +V E+
Sbjct: 50 MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEF-ELEHGFVYRENNRSP 108
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 109 G-----YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYP 144
Score = 34.3 bits (77), Expect(2) = 8e-28
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A+VR++ FDN++QVQ + F+ +P
Sbjct: 144 PTAFVRIIGFDNKRQVQCISFIAYKP 169
[107][TOP]
>UniRef100_Q84NG5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria
bidentis RepID=Q84NG5_FLABI
Length = 173
Score = 115 bits (287), Expect(2) = 8e-28
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K +ET SYLP L++ Q+A ++DY++ N W+PCLEF E + +V E+A
Sbjct: 51 MKVWPPVGKKKYETLSYLPELTEAQLAKEIDYLIRNKWVPCLEF-ELEHGFVYRENARSP 109
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 110 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 8e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCVSFIASKP 170
[108][TOP]
>UniRef100_Q39745 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS3_FLAPR
Length = 173
Score = 115 bits (287), Expect(2) = 8e-28
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA A+++ V P LK NAA PV P+ + M VW P+
Sbjct: 2 ASIPATVATVAQANMVAPFTGLKS--NAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 8e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCISFIASKP 170
[109][TOP]
>UniRef100_Q39743 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS1_FLAPR
Length = 173
Score = 115 bits (287), Expect(2) = 8e-28
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA A+++ V P LK NAA PV P+ + M VW P+
Sbjct: 2 ASIPATVATVAQANMVAPFTGLK--ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 8e-28
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCISFIASKP 170
[110][TOP]
>UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays
RepID=O24574_MAIZE
Length = 170
Score = 117 bits (292), Expect(2) = 8e-28
Identities = 60/149 (40%), Positives = 79/149 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A + + V+ + M VW NK FET SYLPP
Sbjct: 8 ASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPP 67
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 68 LSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKLPM 120
Query: 368 FGCREPMQVLREIVACTKAFPGCLRAPAG 454
FGC + QV +E+ A+P G
Sbjct: 121 FGCTDATQVYKELQEAIAAYPDAFHRVIG 149
Score = 31.2 bits (69), Expect(2) = 8e-28
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDA+ R++ FDN +Q Q + F+ +P
Sbjct: 141 PDAFHRVIGFDNVRQTQCVSFIAYKP 166
[111][TOP]
>UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Malus sp. RepID=RBS_MALSP
Length = 183
Score = 115 bits (287), Expect(2) = 1e-27
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA-----------QANQMMVWTPVNNK 157
++VSA PA++ V P LK + +A+PV + + M VW P+ K
Sbjct: 12 ATVSADRPAPAQARMVAPFTGLKSS-SASPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 70
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G YYD
Sbjct: 71 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENHRSPG-----YYDG 124
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 125 RYWTMWKLPMFGCTDSSQVLKELEEAKKAYP 155
Score = 32.7 bits (73), Expect(2) = 1e-27
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P +++R++ FDN +QVQ + F+ +P
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
[112][TOP]
>UniRef100_A9PG69 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PG69_POPTR
Length = 182
Score = 111 bits (277), Expect(2) = 1e-27
Identities = 69/154 (44%), Positives = 88/154 (57%), Gaps = 18/154 (11%)
Frame = +2
Query: 23 SAAVAR----PARSS-VRPMAALKPAVNAAPVAAPAQANQ-------------MMVWTPV 148
SAAVA PA+++ V P LK A A PV+ +AN M VW P
Sbjct: 9 SAAVATVNRTPAQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQVWPPT 66
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Y
Sbjct: 67 GLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG-----Y 120
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC E QVL E+ KA+P
Sbjct: 121 YDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYP 154
Score = 36.6 bits (83), Expect(2) = 1e-27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P+A++R++ FDN +QVQ + F+ +PK
Sbjct: 149 AKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK 180
[113][TOP]
>UniRef100_A9PFS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PFS6_POPTR
Length = 182
Score = 111 bits (277), Expect(2) = 1e-27
Identities = 68/154 (44%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Frame = +2
Query: 23 SAAVARPARSSVR-----PMAALKPAVNAAPVAAPAQANQ-------------MMVWTPV 148
SAAVA R+ V+ P LK A A PV+ +AN M VW P
Sbjct: 9 SAAVATVNRTPVQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQVWPPT 66
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Y
Sbjct: 67 GLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG-----Y 120
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC E QVL E+ KA+P
Sbjct: 121 YDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYP 154
Score = 36.6 bits (83), Expect(2) = 1e-27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P+A++R++ FDN +QVQ + F+ +PK
Sbjct: 149 AKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK 180
[114][TOP]
>UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x
domestica x Pyrus communis RepID=Q43115_9ROSA
Length = 179
Score = 115 bits (287), Expect(2) = 1e-27
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA-----------QANQMMVWTPVNNK 157
S A V+ PA++ V P LK + +A PV + + M VW P+ K
Sbjct: 8 SGTVATVSAPAQARMVAPFTGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 66
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G YYD
Sbjct: 67 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENNRSPG-----YYDG 120
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 121 RYWTMWKLPMFGCTDSSQVLKELEEAKKAYP 151
Score = 32.7 bits (73), Expect(2) = 1e-27
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P +++R++ FDN +QVQ + F+ +P
Sbjct: 146 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 176
[115][TOP]
>UniRef100_Q9AUJ3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Flaveria palmeri RepID=Q9AUJ3_FLAPA
Length = 131
Score = 115 bits (289), Expect(2) = 1e-27
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A
Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 103
Score = 32.0 bits (71), Expect(2) = 1e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 103 PQAWIRIIGFDNVRQVQCVSFISPKP 128
[116][TOP]
>UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL
Length = 121
Score = 112 bits (281), Expect(2) = 1e-27
Identities = 50/99 (50%), Positives = 63/99 (63%)
Frame = +2
Query: 134 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 313
VW NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF++ Y N S
Sbjct: 1 VWPAYGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------S 53
Query: 314 VSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QV +E+ ++P
Sbjct: 54 TSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP 92
Score = 35.0 bits (79), Expect(2) = 1e-27
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR+L FDN +Q Q + F+ +P
Sbjct: 92 PDAYVRILGFDNIRQTQCVSFIGYKP 117
[117][TOP]
>UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Brassica napus RepID=RBS1_BRANA
Length = 181
Score = 112 bits (279), Expect(2) = 1e-27
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + +A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLP+FGC + QVL+E+ C +P
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYP 150
Score = 35.4 bits (80), Expect(2) = 1e-27
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNNRQVQCISFIAYKPPS 177
[118][TOP]
>UniRef100_A9PJL4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa x Populus deltoides RepID=A9PJL4_9ROSI
Length = 181
Score = 111 bits (277), Expect(2) = 1e-27
Identities = 68/153 (44%), Positives = 86/153 (56%), Gaps = 17/153 (11%)
Frame = +2
Query: 23 SAAVAR----PARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVN 151
SAAVA PA+++ V P LK + +A PV A + M VW P
Sbjct: 8 SAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTG 66
Query: 152 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 331
K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G YY
Sbjct: 67 LKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-----YY 120
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
D RYWTMWKLPMFGC E QVL E+ KA+P
Sbjct: 121 DGRYWTMWKLPMFGCTEASQVLIELEEAKKAYP 153
Score = 36.2 bits (82), Expect(2) = 1e-27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P+++VR++ FDN +QVQ + F+ +PK
Sbjct: 148 AKKAYPNSFVRIIGFDNTRQVQCISFIASKPK 179
[119][TOP]
>UniRef100_Q39747 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS5_FLAPR
Length = 173
Score = 114 bits (285), Expect(2) = 1e-27
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA A+++ V P LK NAA PV P+ + M VW P+
Sbjct: 2 ASIPATVATVAQANMVAPFTGLKS--NAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 1e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCISFIASKP 170
[120][TOP]
>UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica
napus RepID=Q306K0_BRANA
Length = 181
Score = 111 bits (278), Expect(2) = 2e-27
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLP+FGC + QVL+E+ C +P
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYP 150
Score = 35.4 bits (80), Expect(2) = 2e-27
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNNRQVQCISFIAYKPPS 177
[121][TOP]
>UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1
Tax=Brassica napus RepID=RBS2_BRANA
Length = 181
Score = 111 bits (278), Expect(2) = 2e-27
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLP+FGC + QVL+E+ C +P
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYP 150
Score = 35.4 bits (80), Expect(2) = 2e-27
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNNRQVQCISFIAYKPPS 177
[122][TOP]
>UniRef100_A9PHQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PHQ1_POPTR
Length = 181
Score = 111 bits (277), Expect(2) = 2e-27
Identities = 68/153 (44%), Positives = 86/153 (56%), Gaps = 17/153 (11%)
Frame = +2
Query: 23 SAAVAR----PARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVN 151
SAAVA PA+++ V P LK + +A PV A + M VW P
Sbjct: 8 SAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTG 66
Query: 152 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 331
K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G YY
Sbjct: 67 LKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-----YY 120
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
D RYWTMWKLPMFGC E QVL E+ KA+P
Sbjct: 121 DGRYWTMWKLPMFGCTEASQVLIELEEAKKAYP 153
Score = 35.8 bits (81), Expect(2) = 2e-27
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P++++R++ FDN +QVQ + F+ +PK
Sbjct: 148 AKKAYPNSFIRIIGFDNTRQVQCISFIASKPK 179
[123][TOP]
>UniRef100_Q39749 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS7_FLAPR
Length = 173
Score = 114 bits (284), Expect(2) = 2e-27
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAA-PVAAPA-----------QANQMMVWTPVNN 154
+S+ A VA A+++ V P LK NAA PV + M VW P+
Sbjct: 2 ASIPATVATVAQANMVAPFTGLKS--NAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 2e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCISFIASKP 170
[124][TOP]
>UniRef100_A9PJ78 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa x Populus deltoides RepID=A9PJ78_9ROSI
Length = 182
Score = 110 bits (274), Expect(2) = 2e-27
Identities = 52/101 (51%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E
Sbjct: 60 MQVWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVHREHHSSP 118
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC E QVL E+ KA+P
Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTEASQVLVELGEAKKAYP 154
Score = 36.6 bits (83), Expect(2) = 2e-27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + P+A++R++ FDN +QVQ + F+ +PK
Sbjct: 149 AKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK 180
[125][TOP]
>UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis
thaliana RepID=Q2V327_ARATH
Length = 174
Score = 112 bits (280), Expect(2) = 2e-27
Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP LSD ++A +VDY++ N WIPC+EF + G+ YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF------------ELEHGNTPG-YYDG 112
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFPG 433
RYWTMWKLP+FGC + QVL+E+ C K +PG
Sbjct: 113 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPG 144
Score = 34.3 bits (77), Expect(2) = 2e-27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A++R++ FDN +QVQ + F+ +P S
Sbjct: 143 PGAFIRIIGFDNTRQVQCISFIAYKPPS 170
[126][TOP]
>UniRef100_Q39748 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
Tax=Flaveria pringlei RepID=RBS6_FLAPR
Length = 173
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 65/152 (42%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAA-PVAA--------PAQANQ---MMVWTPVNN 154
+S+ A VA A+++ V P LK NAA PV P+ + M VW P+
Sbjct: 2 ASIPATVAAVAQANMVAPFTGLK--ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGK 59
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K + T SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD
Sbjct: 60 KKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYD 113
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + +QV++E+ C K +P
Sbjct: 114 GRYWTMWKLPMFGCTDSVQVMKELQECKKEYP 145
Score = 33.1 bits (74), Expect(2) = 2e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 145 PQAWIRIIGFDNVRQVQCISFIASKP 170
[127][TOP]
>UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays
RepID=B7ZYT6_MAIZE
Length = 153
Score = 115 bits (288), Expect(2) = 2e-27
Identities = 54/110 (49%), Positives = 65/110 (59%)
Frame = +2
Query: 125 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 304
+M VW NK FET SYLPPLS + + QVDY++ NGWIPCLEF++ Y N
Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84
Query: 305 FGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGCLRAPAG 454
S S YYD RYWTMWKLPMFGC + QV +E+ A+P G
Sbjct: 85 --STSPCYYDGRYWTMWKLPMFGCTDATQVYKELQEAIAAYPDAFHRVIG 132
Score = 31.2 bits (69), Expect(2) = 2e-27
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDA+ R++ FDN +Q Q + F+ +P
Sbjct: 124 PDAFHRVIGFDNVRQTQCVSFIAYKP 149
[128][TOP]
>UniRef100_Q9AUJ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Flaveria ramosissima RepID=Q9AUJ5_FLARA
Length = 131
Score = 113 bits (283), Expect(2) = 3e-27
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A
Sbjct: 9 MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSP 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 103
Score = 33.1 bits (74), Expect(2) = 3e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 103 PQAWIRIIGFDNVRQVQCISFIASKP 128
[129][TOP]
>UniRef100_Q9AUJ2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Flaveria palmeri RepID=Q9AUJ2_FLAPA
Length = 131
Score = 113 bits (283), Expect(2) = 3e-27
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K +ET SYLP L++ Q+A +VDY+ N W+PCLEF E + +V E+A
Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLHRNKWVPCLEF-ELEHGFVYRENASSP 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYP 103
Score = 33.1 bits (74), Expect(2) = 3e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 103 PQAWIRIIGFDNVRQVQCVSFIASKP 128
[130][TOP]
>UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Pyrus pyrifolia RepID=RBS_PYRPY
Length = 183
Score = 113 bits (283), Expect(2) = 3e-27
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA-----------QANQMMVWTPVNNK 157
++VSA PA++ V P LK + +A PV + + M VW P+ K
Sbjct: 12 ATVSADRPAPAQARMVAPFNGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 70
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G YYD
Sbjct: 71 KFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEF-ELETGFVYRENHRSPG-----YYDG 124
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 125 RYWTMWKLPMFGCTDSSQVLKELEEAKKAYP 155
Score = 32.7 bits (73), Expect(2) = 3e-27
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P +++R++ FDN +QVQ + F+ +P
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
[131][TOP]
>UniRef100_Q67IU5 Ribulose bisphosphate carboxylase small chain n=2 Tax=Oryza sativa
RepID=Q67IU5_ORYSJ
Length = 183
Score = 106 bits (264), Expect(2) = 4e-27
Identities = 45/101 (44%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M W P N+ +E SYLPPLS + I+ ++++I++ GW+PCLEF + + + SN
Sbjct: 51 MQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSN------ 104
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWT+WKLPMFGC + VLRE+ C + +P
Sbjct: 105 -SRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYP 144
Score = 39.7 bits (91), Expect(2) = 4e-27
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 420 RPSPDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
R PDA++RL+AFD+ +Q Q M F+V +P S
Sbjct: 141 REYPDAFIRLIAFDSSRQCQCMSFVVHKPPS 171
[132][TOP]
>UniRef100_P31333 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Gossypium hirsutum RepID=RBS_GOSHI
Length = 182
Score = 110 bits (275), Expect(2) = 4e-27
Identities = 66/160 (41%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Frame = +2
Query: 8 AKSSVSAAV------ARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQM 130
A S +S+A + PA+++ V P LK A +A PV A + M
Sbjct: 2 ASSMISSATIATVNCSSPAQANMVAPFTGLKSA-SAFPVTRKANNDITSLASNGGRVQCM 60
Query: 131 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 310
VW P+ K FET SYLP L+ Q+A +VDY++ + WIPCLEF E ++ +V ++
Sbjct: 61 QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEF-ELEEGFVHR----KYS 115
Query: 311 SVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S+ YYD RYWTMWKLPMFGC + QVL E+ C K +P
Sbjct: 116 SLP-TYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYP 154
Score = 35.4 bits (80), Expect(2) = 4e-27
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+A++R++ FDN +QVQ + F+ +PK
Sbjct: 154 PNAFIRIIGFDNVRQVQCISFIAYKPK 180
[133][TOP]
>UniRef100_Q43746 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica
napus RepID=Q43746_BRANA
Length = 181
Score = 110 bits (275), Expect(2) = 4e-27
Identities = 65/156 (41%), Positives = 87/156 (55%), Gaps = 15/156 (9%)
Frame = +2
Query: 8 AKSSVSAA--VARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWT 142
A S +S+A V+ PA+++ V P LK + A PV + N M VW
Sbjct: 2 ASSMLSSATVVSSPAQAAMVAPFTGLKSSA-AFPVTRKTNTDITSIASNGGRVNCMKVWP 60
Query: 143 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 322
PV K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G
Sbjct: 61 PVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG---- 115
Query: 323 LYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
Y D RYWTMWKLP+FGC + QVL+E+ C +P
Sbjct: 116 -YNDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYP 150
Score = 35.4 bits (80), Expect(2) = 4e-27
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNNRQVQCISFIAYKPPS 177
[134][TOP]
>UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Marchantia paleacea RepID=RBS_MARPA
Length = 180
Score = 114 bits (285), Expect(2) = 5e-27
Identities = 52/100 (52%), Positives = 62/100 (62%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P NN FET SYLPPLS + +A Q+DY++ +GW PC+EF + R
Sbjct: 59 MQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTRE 111
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAF 427
GS YYD RYWTMWKLPMFGC + VLREI C K +
Sbjct: 112 GSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151
Score = 31.2 bits (69), Expect(2) = 5e-27
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 438 YVRLLAFDNQKQVQIMGFLVQRP 506
Y+R L FDN +QVQ F+V +P
Sbjct: 156 YIRCLGFDNTRQVQCASFIVHQP 178
[135][TOP]
>UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Ageratina adenophora RepID=C1JZ18_9ASTR
Length = 178
Score = 112 bits (280), Expect(2) = 5e-27
Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQ-------------MMVWTPVNN 154
SS A V+R A + +A + A A +AN M VW P+
Sbjct: 5 SSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPPLGL 64
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E A G YYD
Sbjct: 65 KKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYREHARSPG-----YYD 118
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
R+WTMWKLPMFGC + QVL+E+ C K +P
Sbjct: 119 GRHWTMWKLPMFGCTDSAQVLKEVGECKKEYP 150
Score = 33.1 bits (74), Expect(2) = 5e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 150 PQAWIRIIGFDNVRQVQCISFIASKP 175
[136][TOP]
>UniRef100_P12468 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Glycine max RepID=RBS4_SOYBN
Length = 178
Score = 112 bits (280), Expect(2) = 5e-27
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSL 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 33.1 bits (74), Expect(2) = 5e-27
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+ ++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKPPS 177
[137][TOP]
>UniRef100_A1YN03 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa
RepID=A1YN03_BRACM
Length = 181
Score = 109 bits (273), Expect(2) = 7e-27
Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Frame = +2
Query: 17 SVSAAVARPARSS-VRPMAALKPAVNAAPVAAPA------------QANQMMVWTPVNNK 157
S +A V PA+++ V P LK + +A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLP L++ ++ +VDY++ N WIPC+E E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEL-ELEHGFVYREHGSTPG-----YYDG 119
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLP+FGC + QVL+E+ C +P
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYP 150
Score = 35.4 bits (80), Expect(2) = 7e-27
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNNRQVQCISFIAYKPPS 177
[138][TOP]
>UniRef100_Q106Z4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa
acuminata RepID=Q106Z4_MUSAC
Length = 180
Score = 112 bits (280), Expect(2) = 7e-27
Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPVNN 154
S+ + + A PA+SS V P LK + +A PV A A+ M VW
Sbjct: 9 SAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKVWPIEGK 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G YYD
Sbjct: 68 KKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-----YYD 120
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + +QV++E+ C K +P
Sbjct: 121 GRYWTMWKLPMFGCTDAVQVVKEVEECKKEYP 152
Score = 32.7 bits (73), Expect(2) = 7e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 152 PKAFIRIIGFDNNRQVQCISFIAFKP 177
[139][TOP]
>UniRef100_B7FMC2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago
truncatula RepID=B7FMC2_MEDTR
Length = 181
Score = 111 bits (277), Expect(2) = 9e-27
Identities = 51/105 (48%), Positives = 69/105 (65%)
Frame = +2
Query: 116 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 295
+ N M VW P+ K FET SYLPPL+ EQ+A +V+Y++ GW+ CLEF E++K +V E+
Sbjct: 55 RVNCMQVWPPIGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEF-ETEKGFVYREN 113
Query: 296 AIRFGSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLP+FG + QVL+E+ A+P
Sbjct: 114 HSSPG-----YYDGRYWTMWKLPLFGATDASQVLKELDEVVVAYP 153
Score = 33.5 bits (75), Expect(2) = 9e-27
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+A+VR++ FDN +QVQ + F+ P+
Sbjct: 153 PNAFVRIIGFDNVRQVQCISFIAHTPE 179
[140][TOP]
>UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic
n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY
Length = 180
Score = 110 bits (276), Expect(2) = 9e-27
Identities = 64/152 (42%), Positives = 83/152 (54%), Gaps = 16/152 (10%)
Frame = +2
Query: 23 SAAVARPAR----SSVRPMAALKPAVNAAPVAAP------------AQANQMMVWTPVNN 154
SAAVA S V P LK AV+ PV++ + M VW P
Sbjct: 8 SAAVATRTNVAQASMVAPFNGLKSAVSF-PVSSKQNLDITSIASNGGRVQCMQVWPPYGK 66
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S YYD
Sbjct: 67 KKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HASPRYYD 120
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 121 GRYWTMWKLPMFGCTDATQVLGELQEAKKAYP 152
Score = 33.9 bits (76), Expect(2) = 9e-27
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P+A++R++ FDN +QVQ + F+ +P
Sbjct: 147 AKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177
[141][TOP]
>UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Hordeum vulgare RepID=RBS_HORVU
Length = 174
Score = 107 bits (266), Expect(2) = 1e-26
Identities = 56/141 (39%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + ++A V+ + M VW K FET SYLPP
Sbjct: 7 ASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKLPM
Sbjct: 67 LSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 120 FGCTDATQVLNEVEEVKKEYP 140
Score = 37.4 bits (85), Expect(2) = 1e-26
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 140 PDAYVRIIGFDNMRQVQCVSFIAFKP 165
[142][TOP]
>UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot
esculenta RepID=Q9T4H0_MANES
Length = 184
Score = 111 bits (277), Expect(2) = 2e-26
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 13/145 (8%)
Frame = +2
Query: 35 ARPARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPVNNKMFETFS 175
A PA++S V P LK + +A P A+ M VW K FET S
Sbjct: 17 ASPAQASMVAPFTGLK-STSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETLS 75
Query: 176 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 355
YLPPLS EQ+A+++DY++ +GWIPCLEF E + +V G YYD RYWTMW
Sbjct: 76 YLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLPG-----YYDGRYWTMW 129
Query: 356 KLPMFGCREPMQVLREIVACTKAFP 430
KLPMFGC + QVL+E+ KA P
Sbjct: 130 KLPMFGCTDSSQVLKELDELIKAHP 154
Score = 32.7 bits (73), Expect(2) = 2e-26
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PD + R++ FDN +QVQ + F+ +P
Sbjct: 154 PDGFARIIGFDNVRQVQCISFIAYKP 179
[143][TOP]
>UniRef100_A7YVW6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia
chinensis RepID=A7YVW6_ACTCH
Length = 176
Score = 106 bits (265), Expect(2) = 2e-26
Identities = 56/140 (40%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMA-ALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 190
S A++A P P A +L + + ++ + M VW P+ K FET SYLPPL
Sbjct: 13 SVTRASLASPFAGVKSPSAISLGRKLESGSRSSGFKVKCMQVWPPLGKKKFETLSYLPPL 72
Query: 191 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 370
+E + Q+DY++ GWIPC+EF+ + +V E G YYD RYWTMWKLPM+
Sbjct: 73 PEEALLKQIDYLIRMGWIPCIEFSVGE-GFVYREHHHSPG-----YYDGRYWTMWKLPMY 126
Query: 371 GCREPMQVLREIVACTKAFP 430
GC + QV E+ A K +P
Sbjct: 127 GCTDSTQVRAEVEANKKEYP 146
Score = 37.4 bits (85), Expect(2) = 2e-26
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
PD+++R++ FDN++QVQ + F+V P S
Sbjct: 146 PDSFIRIIGFDNKRQVQCVSFIVHTPPS 173
[144][TOP]
>UniRef100_A1YMW8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa
RepID=A1YMW8_BRACM
Length = 162
Score = 108 bits (270), Expect(2) = 2e-26
Identities = 56/140 (40%), Positives = 78/140 (55%)
Frame = +2
Query: 11 KSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 190
KSS + V R A + + + V+ + + M VW PV K FET SYLP L
Sbjct: 9 KSSSAFPVTRKANNDITSI-----------VSNGGRVSCMKVWPPVGKKKFETLSYLPDL 57
Query: 191 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 370
++ ++ +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F
Sbjct: 58 TEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 111
Query: 371 GCREPMQVLREIVACTKAFP 430
GC + QVL+E+ C +P
Sbjct: 112 GCTDSAQVLKEVQECKTEYP 131
Score = 35.4 bits (80), Expect(2) = 2e-26
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 131 PNAFIRIIGFDNNRQVQCISFIAYKPPS 158
[145][TOP]
>UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic
n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY
Length = 180
Score = 109 bits (273), Expect(2) = 2e-26
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E
Sbjct: 58 MQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -HASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYP 152
Score = 33.9 bits (76), Expect(2) = 2e-26
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + P+A++R++ FDN +QVQ + F+ +P
Sbjct: 147 AKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177
[146][TOP]
>UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL
Length = 165
Score = 106 bits (264), Expect(2) = 2e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 2e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[147][TOP]
>UniRef100_Q9AUJ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Flaveria ramosissima RepID=Q9AUJ6_FLARA
Length = 131
Score = 110 bits (275), Expect(2) = 2e-26
Identities = 50/101 (49%), Positives = 67/101 (66%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+
Sbjct: 9 MKVWPPLGKKKYETLSYLPNLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENHRSP 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QV++E+ C K +P
Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSSQVMKELGECKKEYP 103
Score = 33.1 bits (74), Expect(2) = 2e-26
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 103 PQAWIRIIGFDNVRQVQCISFIASKP 128
[148][TOP]
>UniRef100_C6SVL2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6SVL2_SOYBN
Length = 178
Score = 111 bits (277), Expect(2) = 3e-26
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWAPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 3e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[149][TOP]
>UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Glycine max RepID=RBS1_SOYBN
Length = 178
Score = 111 bits (277), Expect(2) = 3e-26
Identities = 52/101 (51%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREH---- 110
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 111 -NRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 3e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[150][TOP]
>UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ2_WHEAT
Length = 175
Score = 105 bits (263), Expect(2) = 3e-26
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ S A + +S+ P++ + + V+ + M VW K FET SYLP
Sbjct: 7 ASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLP
Sbjct: 67 PLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL E+ K +P
Sbjct: 120 MFGCTDATQVLNEVEEVKKEYP 141
Score = 37.4 bits (85), Expect(2) = 3e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 141 PDAYVRVIGFDNLRQVQCVSFIAFRP 166
[151][TOP]
>UniRef100_Q2QTJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QTJ7_ORYSJ
Length = 175
Score = 105 bits (262), Expect(2) = 3e-26
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ S A + +S+ P++ + V+ + + M VW K FET SYLP
Sbjct: 7 ASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWKLP
Sbjct: 67 PLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL+E+ KA+P
Sbjct: 120 MFGCTDATQVLKELEEAKKAYP 141
Score = 37.7 bits (86), Expect(2) = 3e-26
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
[152][TOP]
>UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS3_LEMGI
Length = 177
Score = 122 bits (305), Expect = 3e-26
Identities = 68/155 (43%), Positives = 88/155 (56%), Gaps = 16/155 (10%)
Frame = +2
Query: 14 SSVSAAVAR--PARSSVRPMAALKPAVNAAPVAAPAQANQ--------------MMVWTP 145
+S +AAVAR PA+SS+ P A + +V P A +AN M VW P
Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSV---PFPATRKANNNLSTLPGNGGRVSCMQVWPP 63
Query: 146 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 325
K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S
Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116
Query: 326 YYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYWTMWKLPMFGC + QV+ E+ KA+P
Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYP 151
[153][TOP]
>UniRef100_Q84Y16 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chrysanthemum
x morifolium RepID=Q84Y16_CHRMO
Length = 179
Score = 110 bits (275), Expect(2) = 3e-26
Identities = 65/153 (42%), Positives = 85/153 (55%), Gaps = 14/153 (9%)
Frame = +2
Query: 14 SSVSAAVARPAR---SSVRPMAALKPAVNAAPV--------AAPAQANQ---MMVWTPVN 151
SS A V R S V P LK V A PV + P+ + M VW P+
Sbjct: 6 SSAVATVNRTTSAQASMVAPFTGLKSNV-AFPVTKKSNDFSSLPSNGGRVQCMKVWPPLG 64
Query: 152 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 331
K +ET SYLPPL++ Q+A +V+Y++ N W+PCLEF E + + E+ G YY
Sbjct: 65 LKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEF-ELEHGFPYRENNRSPG-----YY 118
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
D RYWTMWKLPMFGC + QVL+E+ C K +P
Sbjct: 119 DGRYWTMWKLPMFGCNDASQVLKELNECKKEYP 151
Score = 32.3 bits (72), Expect(2) = 3e-26
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P ++VR++ FDN +QVQ + F+ +P
Sbjct: 151 PQSWVRIIGFDNVRQVQCISFIAHKP 176
[154][TOP]
>UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q9FUJ5_SOYBN
Length = 178
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 3e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[155][TOP]
>UniRef100_Q9FUJ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q9FUJ4_SOYBN
Length = 178
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 3e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[156][TOP]
>UniRef100_Q39832 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q39832_SOYBN
Length = 178
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 3e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[157][TOP]
>UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic
n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT
Length = 175
Score = 104 bits (260), Expect(2) = 3e-26
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ + A + +S+ P++ + + V+ + M VW K FET SYLP
Sbjct: 7 ASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLP
Sbjct: 67 PLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL E+ K +P
Sbjct: 120 MFGCTDATQVLNEVEEVKKEYP 141
Score = 38.1 bits (87), Expect(2) = 3e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 141 PDAYVRVIGFDNMRQVQCVSFIAFRP 166
[158][TOP]
>UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SDY9_9POAL
Length = 168
Score = 106 bits (265), Expect(2) = 3e-26
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + A + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 3e-26
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[159][TOP]
>UniRef100_Q9SAW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Secale cereale RepID=Q9SAW4_SECCE
Length = 165
Score = 105 bits (262), Expect(2) = 3e-26
Identities = 55/141 (39%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 3e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[160][TOP]
>UniRef100_Q9S7N3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Triticeae RepID=Q9S7N3_AEGLO
Length = 165
Score = 105 bits (262), Expect(2) = 3e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 3e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[161][TOP]
>UniRef100_P08474 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Cucumis sativus RepID=RBS_CUCSA
Length = 189
Score = 106 bits (264), Expect(2) = 4e-26
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Frame = +2
Query: 35 ARPARSS-VRPMAALKPA----------VNAAPVAAPAQANQMM-VWTPVNNKMFETFSY 178
A PA++S V P LK + V+ +A+ A Q M VW P+ + FET SY
Sbjct: 17 ASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSY 76
Query: 179 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 358
LP +S+EQ++ + DY++ NGW+PC+EF + +V E+ G +YD RYWTMWK
Sbjct: 77 LPDMSNEQLSKECDYLLRNGWVPCVEF-DIGSGFVYRENHRSPG-----FYDGRYWTMWK 130
Query: 359 LPMFGCREPMQVLREIVACTKAFP 430
LPMFGC + QV++EI K +P
Sbjct: 131 LPMFGCTDSSQVIQEIEEAKKEYP 154
Score = 36.2 bits (82), Expect(2) = 4e-26
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRPK 509
A + PDA++R++ FDN +QVQ + F+ +P+
Sbjct: 149 AKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQ 180
[162][TOP]
>UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot
esculenta RepID=Q9TLH3_MANES
Length = 184
Score = 109 bits (273), Expect(2) = 4e-26
Identities = 53/101 (52%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V
Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ KA P
Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHP 154
Score = 32.7 bits (73), Expect(2) = 4e-26
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PD + R++ FDN +QVQ + F+ +P
Sbjct: 154 PDGFARIIGFDNVRQVQCISFIAYKP 179
[163][TOP]
>UniRef100_P07689 Ribulose bisphosphate carboxylase small chain 3A, chloroplastic n=1
Tax=Pisum sativum RepID=RBS3_PEA
Length = 180
Score = 107 bits (268), Expect(2) = 4e-26
Identities = 50/101 (49%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E
Sbjct: 58 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFG + QVL+E+ A+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYP 152
Score = 34.7 bits (78), Expect(2) = 4e-26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A+VR++ FDN +QVQ + F+ P+S
Sbjct: 152 PQAFVRIIGFDNVRQVQCISFIAHTPES 179
[164][TOP]
>UniRef100_P00869 Ribulose bisphosphate carboxylase small chain 3C, chloroplastic n=1
Tax=Pisum sativum RepID=RBS2_PEA
Length = 180
Score = 107 bits (268), Expect(2) = 4e-26
Identities = 50/101 (49%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E
Sbjct: 58 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFG + QVL+E+ A+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYP 152
Score = 34.7 bits (78), Expect(2) = 4e-26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A+VR++ FDN +QVQ + F+ P+S
Sbjct: 152 PQAFVRIIGFDNVRQVQCISFIAHTPES 179
[165][TOP]
>UniRef100_C6T1Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6T1Y2_SOYBN
Length = 178
Score = 110 bits (275), Expect(2) = 4e-26
Identities = 52/101 (51%), Positives = 64/101 (63%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 32.0 bits (71), Expect(2) = 4e-26
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P+ ++R++ FDN +QVQ + F+ +P
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKP 175
[166][TOP]
>UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ5_WHEAT
Length = 175
Score = 105 bits (261), Expect(2) = 4e-26
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ S A + +S+ P++ + V+ + +M VW K FET SYLP
Sbjct: 7 ASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKLP
Sbjct: 67 PLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QV+ E+ K +P
Sbjct: 120 MFGCTDATQVINEVEEVKKEYP 141
Score = 37.4 bits (85), Expect(2) = 4e-26
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 141 PDAYVRIIGFDNMRQVQCVSFIAFKP 166
[167][TOP]
>UniRef100_Q36688 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
RepID=Q36688_ORYSA
Length = 169
Score = 104 bits (260), Expect(2) = 4e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ A + + V+ + M VW K FET SYLPP
Sbjct: 2 ASSATTVAPFQGLKSTAGMPVARRSNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPP 61
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWKLPM
Sbjct: 62 LTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHK-------SPGYYDGRYWTMWKLPM 114
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL+E+ KA+P
Sbjct: 115 FGCTDATQVLKELEEAKKAYP 135
Score = 37.7 bits (86), Expect(2) = 4e-26
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 130 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 160
[168][TOP]
>UniRef100_Q9SAX5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops speltoides RepID=Q9SAX5_AEGSP
Length = 165
Score = 105 bits (261), Expect(2) = 4e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLSEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 4e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[169][TOP]
>UniRef100_Q9SAW7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum turgidum subsp. dicoccoides
RepID=Q9SAW7_TRITU
Length = 165
Score = 104 bits (259), Expect(2) = 4e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 38.1 bits (87), Expect(2) = 4e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAYRP 161
[170][TOP]
>UniRef100_Q2PW45 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Coffea arabica RepID=Q2PW45_COFAR
Length = 117
Score = 108 bits (270), Expect(2) = 5e-26
Identities = 49/98 (50%), Positives = 64/98 (65%)
Frame = +2
Query: 143 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 322
P K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G
Sbjct: 1 PRGLKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG---- 55
Query: 323 LYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGC 436
YYD RYWTMWKLPM+GC + QVL E+ C K +P C
Sbjct: 56 -YYDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNC 92
Score = 33.9 bits (76), Expect(2) = 5e-26
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPK 509
P+ +VR++ FDN +QVQ + F+ +PK
Sbjct: 90 PNCWVRIIGFDNVRQVQCISFIAAKPK 116
[171][TOP]
>UniRef100_Q42915 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Manihot esculenta RepID=RBS_MANES
Length = 182
Score = 107 bits (266), Expect(2) = 6e-26
Identities = 53/101 (52%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW + K FET SYLPPL+ EQ+A++V+Y++ +GWIPCLEF E + V E A
Sbjct: 60 MKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEF-ELEHGLVYREHARVP 118
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ K P
Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHP 154
Score = 35.0 bits (79), Expect(2) = 6e-26
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PD Y R++ FDN +QVQ + FL +P
Sbjct: 154 PDGYARIIGFDNVRQVQCISFLAYKP 179
[172][TOP]
>UniRef100_Q43874 Ribulose bisphosphate carboxylase small chain n=1 Tax=Phaseolus
vulgaris RepID=Q43874_PHAVU
Length = 180
Score = 108 bits (269), Expect(2) = 6e-26
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
+ VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E
Sbjct: 58 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL+E+ A P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHP 152
Score = 33.9 bits (76), Expect(2) = 6e-26
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PD ++R++ FDN +QVQ + F+ +P
Sbjct: 152 PDGFIRIIGFDNVRQVQCISFIAYKP 177
[173][TOP]
>UniRef100_A7YVW5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia
deliciosa RepID=A7YVW5_ACTDE
Length = 176
Score = 105 bits (261), Expect(2) = 6e-26
Identities = 48/101 (47%), Positives = 63/101 (62%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ + FET SYLPPL + + Q+DY++ +GWIPC+EF + +V E
Sbjct: 52 MQVWPPLGKRKFETLSYLPPLPVDALLKQIDYLIRSGWIPCIEFTVGE-GFVYREHHHSP 110
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPM+GC + QVL E+ A K +P
Sbjct: 111 G-----YYDGRYWTMWKLPMYGCTDSTQVLAEVEANKKEYP 146
Score = 37.0 bits (84), Expect(2) = 6e-26
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P++Y+R++ FDN++QVQ + F+V P S
Sbjct: 146 PNSYIRIIGFDNKRQVQCVSFIVHTPPS 173
[174][TOP]
>UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FEE4_WHEAT
Length = 174
Score = 104 bits (260), Expect(2) = 6e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 7 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 67 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 120 FGCTDATQVLNEVEEVKKEYP 140
Score = 37.4 bits (85), Expect(2) = 6e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 140 PDAYVRVIGFDNLRQVQCVSFIAFRP 165
[175][TOP]
>UniRef100_Q575T3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
turgidum subsp. durum RepID=Q575T3_TRITU
Length = 170
Score = 104 bits (260), Expect(2) = 6e-26
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ S A + +S+ P++ + + V+ + M VW K FET SYLP
Sbjct: 2 ASSATSVAPFQGLKSTDGLPISRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLP 61
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLP
Sbjct: 62 PLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLP 114
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL E+ K +P
Sbjct: 115 MFGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 6e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[176][TOP]
>UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SDY8_9POAL
Length = 168
Score = 105 bits (263), Expect(2) = 6e-26
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + A + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 6e-26
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[177][TOP]
>UniRef100_Q9ZWG6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Hordeum vulgare RepID=Q9ZWG6_HORVU
Length = 165
Score = 104 bits (259), Expect(2) = 6e-26
Identities = 53/141 (37%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+ E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.7 bits (86), Expect(2) = 6e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRIIGFDNLRQVQCVSFIAFRP 161
[178][TOP]
>UniRef100_Q7DM38 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Phaseolus vulgaris RepID=Q7DM38_PHAVU
Length = 135
Score = 108 bits (269), Expect(2) = 6e-26
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
+ VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E
Sbjct: 13 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 67
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL+E+ A P
Sbjct: 68 -NKSPGYYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHP 107
Score = 33.9 bits (76), Expect(2) = 6e-26
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PD ++R++ FDN +QVQ + F+ +P
Sbjct: 107 PDGFIRIIGFDNVRQVQCISFIAYKP 132
[179][TOP]
>UniRef100_Q41373 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Saccharum sp. RepID=RBS_SACHY
Length = 168
Score = 120 bits (302), Expect = 7e-26
Identities = 63/149 (42%), Positives = 84/149 (56%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ +AA + +S+ A + + A V+ + M VW NK FET SYLPP
Sbjct: 7 ASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPP 66
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L+ EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKLPM
Sbjct: 67 LTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKLPM 119
Query: 368 FGCREPMQVLREIVACTKAFPGCLRAPAG 454
FGC + QV +E+ ++P LRA G
Sbjct: 120 FGCTDASQVYKELQEAIASYPE-LRAILG 147
[180][TOP]
>UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic
n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT
Length = 174
Score = 104 bits (259), Expect(2) = 8e-26
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAV----------NAAPVAAPAQANQMMVWTPVNNKMFET 169
++ AV + ++V P LK + V+ + M VW K FET
Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFET 60
Query: 170 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 349
SYLPPLS E ++ QVDY++ + W+PCLEF++ + + S S YYD RYWT
Sbjct: 61 LSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWT 113
Query: 350 MWKLPMFGCREPMQVLREIVACTKAFP 430
MWKLPMFGC + QVL E+ K +P
Sbjct: 114 MWKLPMFGCTDATQVLNEVEEVKKEYP 140
Score = 37.4 bits (85), Expect(2) = 8e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 140 PDAYVRVIGFDNLRQVQCVSFIAFRP 165
[181][TOP]
>UniRef100_Q9SAW9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops tauschii RepID=Q9SAW9_AEGTA
Length = 165
Score = 104 bits (259), Expect(2) = 8e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGIVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 8e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[182][TOP]
>UniRef100_Q9SAW8 Ribulose bisphosphate carboxylase small chain (Fragment) n=7
Tax=Triticeae RepID=Q9SAW8_TRITI
Length = 165
Score = 104 bits (259), Expect(2) = 8e-26
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 8e-26
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[183][TOP]
>UniRef100_A4SA23 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4SA23_OSTLU
Length = 177
Score = 120 bits (301), Expect = 9e-26
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +2
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCL 325
+ +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++
Sbjct: 43 SRRMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAG 102
Query: 326 YYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGCLRAPAG 454
YYDNRYW MWKLPM+GC+ P +V+ EI C K FP C AG
Sbjct: 103 YYDNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPDCYVRVAG 145
[184][TOP]
>UniRef100_Q9FRZ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ4_WHEAT
Length = 175
Score = 103 bits (258), Expect(2) = 1e-25
Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Frame = +2
Query: 20 VSAAVARPARSSVRPMAALKPAV--------NAAPVAAPAQANQ---MMVWTPVNNKMFE 166
++ AV + +SV P LK N A + + + + M VW K FE
Sbjct: 1 MAPAVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 60
Query: 167 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 346
T SYLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYW
Sbjct: 61 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYW 113
Query: 347 TMWKLPMFGCREPMQVLREIVACTKAFP 430
TMWKLPMFGC + QV+ E+ K +P
Sbjct: 114 TMWKLPMFGCTDATQVINEVEEVKKEYP 141
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 141 PDAYVRIIGFDNMRQVQCVSFIAFKP 166
[185][TOP]
>UniRef100_Q9SNZ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena maroccana RepID=Q9SNZ6_9POAL
Length = 168
Score = 105 bits (261), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV+RE+ K +P
Sbjct: 116 FGCTDASQVIREVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 1e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[186][TOP]
>UniRef100_Q9ZWG7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Secale cereale RepID=Q9ZWG7_SECCE
Length = 165
Score = 103 bits (258), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGNVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[187][TOP]
>UniRef100_Q9SAX6 Ribulose bisphosphate carboxylase small chain (Fragment) n=3
Tax=Triticeae RepID=Q9SAX6_WHEAT
Length = 165
Score = 103 bits (258), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[188][TOP]
>UniRef100_Q9SAX1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops bicornis RepID=Q9SAX1_AEGBI
Length = 164
Score = 103 bits (258), Expect(2) = 1e-25
Identities = 55/141 (39%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTGGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD+RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDSRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[189][TOP]
>UniRef100_Q9AXP2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Citrus reticulata RepID=Q9AXP2_CITRE
Length = 118
Score = 111 bits (277), Expect(2) = 1e-25
Identities = 52/101 (51%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E
Sbjct: 2 MQVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVYREHHSSP 60
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPM+GC + QVL+E+ K +P
Sbjct: 61 G-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYP 96
Score = 30.0 bits (66), Expect(2) = 1e-25
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFL 494
P ++VR++ FDN++QVQ + F+
Sbjct: 96 PHSFVRIIGFDNKRQVQCISFI 117
[190][TOP]
>UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum
tuberosum RepID=A9YTZ8_SOLTU
Length = 181
Score = 120 bits (300), Expect = 1e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ C K++P
Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYP 153
[191][TOP]
>UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS1_SOLLC
Length = 181
Score = 120 bits (300), Expect = 1e-25
Identities = 53/101 (52%), Positives = 71/101 (70%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E+++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNSSP 117
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 153
[192][TOP]
>UniRef100_Q106Z3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa
acuminata RepID=Q106Z3_MUSAC
Length = 181
Score = 109 bits (273), Expect(2) = 1e-25
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 15/154 (9%)
Frame = +2
Query: 14 SSVSAAVAR--PARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPV 148
SS +A V+R PA+SS V P LK + +A PV A A+ M VW
Sbjct: 8 SSAAAVVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKVWPIE 66
Query: 149 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 328
K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Y
Sbjct: 67 GKKKFETLSYLPTLVDEVLLKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG-----Y 119
Query: 329 YDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YD RYWTMWKLPMFGC + QV +E+ C K +P
Sbjct: 120 YDGRYWTMWKLPMFGCTDATQVAKELEECKKEYP 153
Score = 31.2 bits (69), Expect(2) = 1e-25
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A+V ++ FDN +QVQ + F+ +P
Sbjct: 153 PRAFVGIIGFDNNRQVQCISFIAHKP 178
[193][TOP]
>UniRef100_A5JPN4 Ribulose bisphosphate carboxylase small chain n=2 Tax=Musa
acuminata RepID=A5JPN4_MUSAC
Length = 180
Score = 107 bits (267), Expect(2) = 1e-25
Identities = 64/152 (42%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPVNN 154
S+ + A PA+SS V P LK A +A PV A+ M VW
Sbjct: 9 SAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGL 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLP L DE + Q++Y++ + WIPCLEF K +V E+ G YYD
Sbjct: 68 KKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG-----YYD 120
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + +QV +E+ C K +P
Sbjct: 121 GRYWTMWKLPMFGCTDAVQVAKEVEECKKEYP 152
Score = 33.5 bits (75), Expect(2) = 1e-25
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 152 PHAFIRIIGFDNNRQVQCISFIAYKP 177
[194][TOP]
>UniRef100_Q42823 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Glycine tabacina RepID=RBS_GLYTA
Length = 178
Score = 106 bits (264), Expect(2) = 1e-25
Identities = 51/101 (50%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHHRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 34.7 bits (78), Expect(2) = 1e-25
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+A++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNAFIRIIGFDNVRQVQCISFIAYKPPS 177
[195][TOP]
>UniRef100_Q2QTJ1 Ribulose bisphosphate carboxylase small chain n=2 Tax=Oryza sativa
RepID=Q2QTJ1_ORYSJ
Length = 175
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 48 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 104 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
[196][TOP]
>UniRef100_A2ZJQ0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
Indica Group RepID=A2ZJQ0_ORYSI
Length = 175
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 48 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 104 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
[197][TOP]
>UniRef100_P18566 Ribulose bisphosphate carboxylase small chain A, chloroplastic n=3
Tax=Oryza sativa RepID=RBS2_ORYSJ
Length = 175
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 48 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 104 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
[198][TOP]
>UniRef100_Q0INY7 Ribulose bisphosphate carboxylase small chain, chloroplastic n=3
Tax=Oryza sativa RepID=RBS1_ORYSJ
Length = 175
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 48 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 104 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 141
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
[199][TOP]
>UniRef100_Q9ZRS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale
cereale RepID=Q9ZRS6_SECCE
Length = 175
Score = 102 bits (255), Expect(2) = 1e-25
Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ + A + +S+ P+ + + V+ + M VW K FET SYLP
Sbjct: 7 ASSATTVAPFQGLKSTAGLPVGRRSGSAGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + QVDY++ + W+PCLEF++ + + + S YYD RYWTMWKLP
Sbjct: 67 PLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNN-------SPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QVL E+ K +P
Sbjct: 120 MFGCTDATQVLNEVEEVKKEYP 141
Score = 38.1 bits (87), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 141 PDAYVRVIGFDNMRQVQCVSFIAFRP 166
[200][TOP]
>UniRef100_Q9ZWG9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum timopheevii subsp. armeniacum
RepID=Q9ZWG9_TRITI
Length = 165
Score = 103 bits (257), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLSEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[201][TOP]
>UniRef100_Q9ZWG3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum urartu RepID=Q9ZWG3_9POAL
Length = 165
Score = 103 bits (257), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLNEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[202][TOP]
>UniRef100_Q9SAX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Aegilops speltoides RepID=Q9SAX3_AEGSP
Length = 165
Score = 103 bits (257), Expect(2) = 1e-25
Identities = 54/141 (38%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVGRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLSEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[203][TOP]
>UniRef100_A6N149 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Oryza sativa Indica Group RepID=A6N149_ORYSI
Length = 157
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 30 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 85
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 86 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 123
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 118 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 148
[204][TOP]
>UniRef100_Q2QTK0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QTK0_ORYSJ
Length = 128
Score = 103 bits (256), Expect(2) = 1e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 1 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 56
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 57 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYP 94
Score = 37.7 bits (86), Expect(2) = 1e-25
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ F+ +P
Sbjct: 89 AKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 119
[205][TOP]
>UniRef100_A4SA21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA21_OSTLU
Length = 134
Score = 119 bits (299), Expect = 1e-25
Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = +2
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCLYY 331
+MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++ YY
Sbjct: 2 RMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYY 61
Query: 332 DNRYWTMWKLPMFGCREPMQVLREIVACTKAFPGCLRAPAG 454
DNRYW MWKLPM+GC+ P +V+ EI C K FP C AG
Sbjct: 62 DNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPECYVRVAG 102
[206][TOP]
>UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR
Length = 182
Score = 119 bits (299), Expect = 1e-25
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPV----------AAPAQANQMMVWTPVNNK 157
A ++++AA + V P LK +++A PV A+ Q MVW P+ K
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMK 67
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYDG 121
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC +P QV+ E+ KA+P
Sbjct: 122 RYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 152
[207][TOP]
>UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS4_LEMGI
Length = 177
Score = 119 bits (299), Expect = 1e-25
Identities = 66/155 (42%), Positives = 88/155 (56%), Gaps = 16/155 (10%)
Frame = +2
Query: 14 SSVSAAVAR--PARSSVRPMAALKPAVNAAPVAAPAQANQ--------------MMVWTP 145
+S +AAVAR PA++++ P A + +V P A +AN M VW P
Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSV---PFPATRKANNDLSTLPSNGGRVSCMQVWPP 63
Query: 146 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 325
K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S
Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116
Query: 326 YYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYWTMWKLPMFGC + QV+ E+ KA+P
Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYP 151
[208][TOP]
>UniRef100_O24045 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Musa acuminata RepID=RBS_MUSAC
Length = 180
Score = 107 bits (266), Expect(2) = 2e-25
Identities = 63/152 (41%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPVNN 154
S+ + A PA+SS V P LK A +A PV A+ M VW
Sbjct: 9 SAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGV 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLP + DE + Q++Y++ + WIPCLEF K +V E+ G YYD
Sbjct: 68 KKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG-----YYD 120
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC + +QV +E+ C K +P
Sbjct: 121 GRYWTMWKLPMFGCTDAVQVAKEVEECKKEYP 152
Score = 33.5 bits (75), Expect(2) = 2e-25
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 152 PHAFIRIIGFDNNRQVQCISFIAYKP 177
[209][TOP]
>UniRef100_Q42815 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine soja
RepID=Q42815_GLYSO
Length = 178
Score = 107 bits (267), Expect(2) = 2e-25
Identities = 52/101 (51%), Positives = 63/101 (62%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD R WTMWKLPMFGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRCWTMWKLPMFGCTDASQVLKELQEAKTAYP 150
Score = 33.1 bits (74), Expect(2) = 2e-25
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+ ++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKPPS 177
[210][TOP]
>UniRef100_Q9ZSS0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9ZSS0_9POAL
Length = 168
Score = 104 bits (259), Expect(2) = 2e-25
Identities = 52/141 (36%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 2e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[211][TOP]
>UniRef100_Q9SNZ8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SNZ8_9POAL
Length = 168
Score = 104 bits (259), Expect(2) = 2e-25
Identities = 53/141 (37%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + A + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSASSLGNVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 2e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[212][TOP]
>UniRef100_Q9SNZ7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Avena RepID=Q9SNZ7_9POAL
Length = 168
Score = 104 bits (259), Expect(2) = 2e-25
Identities = 53/141 (37%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQELKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 2e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[213][TOP]
>UniRef100_Q9SAW6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum aestivum RepID=Q9SAW6_WHEAT
Length = 165
Score = 103 bits (256), Expect(2) = 2e-25
Identities = 54/141 (38%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKLPM
Sbjct: 63 LSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QVL E+ K +P
Sbjct: 116 FGCTDATQVLIEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 2e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[214][TOP]
>UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum
tuberosum RepID=A9YTZ7_SOLTU
Length = 181
Score = 119 bits (298), Expect = 2e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ C K++P
Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDTTQVLAEVQECKKSYP 153
[215][TOP]
>UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBS1_SOLTU
Length = 181
Score = 119 bits (298), Expect = 2e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ C K++P
Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYP 153
[216][TOP]
>UniRef100_Q9SP00 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena agadiriana RepID=Q9SP00_9POAL
Length = 168
Score = 103 bits (258), Expect(2) = 2e-25
Identities = 54/141 (38%), Positives = 78/141 (55%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E +GS YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFRE----YGSTPG-YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 2e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[217][TOP]
>UniRef100_Q9SDY7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Avena RepID=Q9SDY7_9POAL
Length = 168
Score = 103 bits (258), Expect(2) = 2e-25
Identities = 53/141 (37%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 2e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[218][TOP]
>UniRef100_Q9SAX7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops speltoides RepID=Q9SAX7_AEGSP
Length = 165
Score = 102 bits (255), Expect(2) = 2e-25
Identities = 49/101 (48%), Positives = 61/101 (60%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPLS E + QVDY++ + W+PCLEF++ + + S
Sbjct: 43 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS---- 98
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL E+ K +P
Sbjct: 99 ---SPGYYDGRYWTMWKLPMFGCTDATQVLSEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 2e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[219][TOP]
>UniRef100_Q9S800 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops speltoides RepID=Q9S800_AEGSP
Length = 165
Score = 102 bits (255), Expect(2) = 2e-25
Identities = 49/101 (48%), Positives = 61/101 (60%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPLS E + QVDY++ + W+PCLEF++ + + S
Sbjct: 43 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS---- 98
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL E+ K +P
Sbjct: 99 ---SPGYYDGRYWTMWKLPMFGCTDATQVLSEVEEVKKEYP 136
Score = 37.4 bits (85), Expect(2) = 2e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFIAFRP 161
[220][TOP]
>UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Spinacia oleracea RepID=RBS2_SPIOL
Length = 180
Score = 119 bits (297), Expect = 3e-25
Identities = 67/151 (44%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Frame = +2
Query: 23 SAAVARPAR-----SSVRPMAALKPAVN----------AAPVAAPAQANQMMVWTPVNNK 157
SAAVA +R S V P LK V + + + M VW N K
Sbjct: 8 SAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMK 67
Query: 158 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 337
+ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G YYD
Sbjct: 68 RYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-----YYDG 121
Query: 338 RYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC +P QVL E+ C K +P
Sbjct: 122 RYWTMWKLPMFGCTDPAQVLNELEECKKEYP 152
[221][TOP]
>UniRef100_Q9ZRS5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale
cereale RepID=Q9ZRS5_SECCE
Length = 175
Score = 102 bits (254), Expect(2) = 3e-25
Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVR-PMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
A S+ S A + +S+ P++ + V+ + M VW K FET SYLP
Sbjct: 7 ASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLP 66
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PL+ E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKLP
Sbjct: 67 PLTTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLP 119
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QV+ E+ K +P
Sbjct: 120 MFGCTDATQVINEVEEVKKEYP 141
Score = 37.4 bits (85), Expect(2) = 3e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 141 PDAYVRIIGFDNMRQVQCVSFIAFKP 166
[222][TOP]
>UniRef100_Q9ZSS5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena sterilis subsp. ludoviciana RepID=Q9ZSS5_9POAL
Length = 168
Score = 103 bits (257), Expect(2) = 3e-25
Identities = 51/141 (36%), Positives = 77/141 (54%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L++E + Q+D+++ + W+PCLEF++ ++ E G YYD RYWTMWKLPM
Sbjct: 63 LTEEALLKQIDFLIRSKWVPCLEFSQG--GFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 3e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[223][TOP]
>UniRef100_Q9ZWG2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Bromus catharticus RepID=Q9ZWG2_BROCA
Length = 164
Score = 103 bits (256), Expect(2) = 3e-25
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Frame = +2
Query: 32 VARPARSSVRPMAALKP---------AVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 184
V + +SV P LK + V++ + M VW K FET SYLP
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSTGLGSVSSGGRIRCMQVWPIEGIKKFETLSYLP 60
Query: 185 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 364
PLS E + Q+DY++ + W+PCLEF++ + R + S YYD RYWTMWKLP
Sbjct: 61 PLSTEALLKQIDYLIRSKWVPCLEFSKVGFVF-------REHNASPGYYDGRYWTMWKLP 113
Query: 365 MFGCREPMQVLREIVACTKAFP 430
MFGC + QV++E+ K +P
Sbjct: 114 MFGCTDASQVIKELEEVKKEYP 135
Score = 36.6 bits (83), Expect(2) = 3e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 135 PDAYVRIIGFDNLRQVQCVSFIAFKP 160
[224][TOP]
>UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
tauri RepID=Q00SG3_OSTTA
Length = 191
Score = 118 bits (296), Expect = 3e-25
Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 24/132 (18%)
Frame = +2
Query: 113 AQANQMMVWTPVNNK-----------------------MFETFSYLPPLSDEQIAAQVDY 223
A A MM+W P NK MFETFS+LPPLSD +IA Q Y
Sbjct: 22 ANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAEIAKQCQY 81
Query: 224 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCREPMQVLR 400
++ NGW PC+EF +++ AY S++ LYYDNRYW MWKLPM+GC+ +VL
Sbjct: 82 LLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLA 141
Query: 401 EIVACTKAFPGC 436
E+ K FP C
Sbjct: 142 EVNMAKKCFPDC 153
[225][TOP]
>UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR
Length = 183
Score = 118 bits (296), Expect = 3e-25
Identities = 64/152 (42%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAP-----------AQANQMMVWTPVNN 154
A ++++AA + V P LK +V+A PV + M VW P+
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC +P QV+ E+ KA+P
Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 153
[226][TOP]
>UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS3B_SOLLC
Length = 180
Score = 118 bits (296), Expect = 3e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152
[227][TOP]
>UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic
n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC
Length = 180
Score = 118 bits (296), Expect = 3e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152
[228][TOP]
>UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS2A_SOLLC
Length = 180
Score = 118 bits (296), Expect = 3e-25
Identities = 53/101 (52%), Positives = 71/101 (70%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152
[229][TOP]
>UniRef100_Q9ZWG4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena sativa RepID=Q9ZWG4_AVESA
Length = 165
Score = 103 bits (256), Expect(2) = 4e-25
Identities = 53/141 (37%), Positives = 75/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVGRRSNAGLGNVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 4e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[230][TOP]
>UniRef100_Q9ZRI4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Pisum sativum RepID=Q9ZRI4_PEA
Length = 139
Score = 104 bits (260), Expect(2) = 4e-25
Identities = 49/101 (48%), Positives = 65/101 (64%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+ K FET SYLPPL+ +Q+ +V+Y++ W+PCLEF E +K +V E
Sbjct: 17 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKPWVPCLEF-ELEKGFVYREH---- 71
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFG + QVL+E+ A+P
Sbjct: 72 -NKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYP 111
Score = 34.7 bits (78), Expect(2) = 4e-25
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P A+VR++ FDN +QVQ + F+ P+S
Sbjct: 111 PQAFVRIIGFDNVRQVQCISFIAHTPES 138
[231][TOP]
>UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSC_SOLTU
Length = 180
Score = 118 bits (295), Expect = 4e-25
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152
[232][TOP]
>UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSB_SOLTU
Length = 180
Score = 118 bits (295), Expect = 4e-25
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152
[233][TOP]
>UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSA_SOLTU
Length = 180
Score = 118 bits (295), Expect = 4e-25
Identities = 54/101 (53%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152
[234][TOP]
>UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBS3_SOLTU
Length = 181
Score = 118 bits (295), Expect = 4e-25
Identities = 54/101 (53%), Positives = 69/101 (68%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 153
[235][TOP]
>UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP
Length = 180
Score = 118 bits (295), Expect = 4e-25
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW PV K FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF E + +V E+
Sbjct: 58 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEF-ELEHPFVYRENHRSP 116
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G Y D RYWTMWKLPM+GC +P QVL E+ KA+P
Sbjct: 117 G-----YQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYP 152
[236][TOP]
>UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR
Length = 180
Score = 118 bits (295), Expect = 4e-25
Identities = 68/152 (44%), Positives = 87/152 (57%), Gaps = 14/152 (9%)
Frame = +2
Query: 17 SVSAAVAR--PARSS-VRPMAALKPAVNAAPVAAPA-----------QANQMMVWTPVNN 154
S +A V R PA++S V P LK +V+A PV + + M VW P+
Sbjct: 6 SNAAVVGRTTPAQASMVAPFTGLK-SVSAFPVTKKSNDITSIASNGGRVQCMQVWPPLGK 64
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 65 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 118
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC +P QV+ E+ KA+P
Sbjct: 119 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 150
[237][TOP]
>UniRef100_Q106Z5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa
acuminata AAA Group RepID=Q106Z5_MUSAC
Length = 180
Score = 105 bits (262), Expect(2) = 5e-25
Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Frame = +2
Query: 14 SSVSAAVARPARSS-VRPMAALKPAVNAAPVAAPAQANQ------------MMVWTPVNN 154
S+ + A PA+SS V P LK A +A PV A+ M VW
Sbjct: 9 SAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGV 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLP L DE + Q++Y++ + WIPCLEF K +V E+ G YYD
Sbjct: 68 KKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG-----YYD 120
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMW LPMFGC + +QV +E+ C K +P
Sbjct: 121 GRYWTMWNLPMFGCTDAVQVAKEVEECKKEYP 152
Score = 33.5 bits (75), Expect(2) = 5e-25
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
P A++R++ FDN +QVQ + F+ +P
Sbjct: 152 PHAFIRIIGFDNNRQVQCVSFIAYKP 177
[238][TOP]
>UniRef100_Q9ZSK0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena vaviloviana RepID=Q9ZSK0_9POAL
Length = 168
Score = 102 bits (255), Expect(2) = 5e-25
Identities = 52/141 (36%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ + A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATTVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 5e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[239][TOP]
>UniRef100_Q9SBU5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena sterilis subsp. ludoviciana RepID=Q9SBU5_9POAL
Length = 168
Score = 102 bits (255), Expect(2) = 5e-25
Identities = 52/141 (36%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
L++E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKLPM
Sbjct: 63 LTEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 5e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[240][TOP]
>UniRef100_Q9ZWH4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops speltoides RepID=Q9ZWH4_AEGSP
Length = 165
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 49/101 (48%), Positives = 61/101 (60%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPLS E + QVDY++ + W+PCLEF++ + + S
Sbjct: 43 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS---- 98
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL E+ K +P
Sbjct: 99 ---SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYP 136
Score = 35.8 bits (81), Expect(2) = 5e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F RP
Sbjct: 136 PDAYVRVIGFDNLRQVQCVSFSAFRP 161
[241][TOP]
>UniRef100_Q84LN2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Citrus limon RepID=Q84LN2_CITLI
Length = 119
Score = 112 bits (279), Expect(2) = 5e-25
Identities = 53/101 (52%), Positives = 66/101 (65%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E
Sbjct: 7 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLLRSGWIPCLEF-ELEKGWVYREHHRSP 65
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLPMFGC + QVL+E+ K +P
Sbjct: 66 G-----YYDGRYWTMWKLPMFGCTDATQVLKEVGEVQKEYP 101
Score = 26.9 bits (58), Expect(2) = 5e-25
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQ 479
P ++VR++ FDN++QVQ
Sbjct: 101 PHSFVRIIGFDNKRQVQ 117
[242][TOP]
>UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia
oleracea RepID=O20253_SPIOL
Length = 180
Score = 117 bits (294), Expect = 6e-25
Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Frame = +2
Query: 26 AAVAR-PARSS-VRPMAALKPAVN----------AAPVAAPAQANQMMVWTPVNNKMFET 169
A V+R PA++S V P LK V + + + M VW N K +ET
Sbjct: 12 ATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYET 71
Query: 170 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 349
SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G YYD RYWT
Sbjct: 72 LSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-----YYDGRYWT 125
Query: 350 MWKLPMFGCREPMQVLREIVACTKAFP 430
MWKLPMFGC +P QVL E+ C K +P
Sbjct: 126 MWKLPMFGCTDPAQVLNELEECKKEYP 152
[243][TOP]
>UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NXP2_PICSI
Length = 188
Score = 117 bits (294), Expect = 6e-25
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 16/155 (10%)
Frame = +2
Query: 14 SSVSAAVARPARSSVRPMAALKPAVNAAPVAAPA----------------QANQMMVWTP 145
SS +A P ++ V+ +A+ A+N + A + + M VW P
Sbjct: 11 SSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGSRVHCMQVWPP 70
Query: 146 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 325
+NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF + +N G +
Sbjct: 71 INNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN------GVMVPG 124
Query: 326 YYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
YYD RYW++WKLPMFGC QVL E+ C KA+P
Sbjct: 125 YYDGRYWSLWKLPMFGCTNSAQVLSELEECKKAYP 159
[244][TOP]
>UniRef100_Q42822 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Glycine tomentella RepID=RBS_GLYTO
Length = 178
Score = 105 bits (262), Expect(2) = 6e-25
Identities = 50/101 (49%), Positives = 63/101 (62%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E+
Sbjct: 56 MQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYRENHRSP 114
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
G YYD RYWTMWKLP+FGC + QVL+E+ A+P
Sbjct: 115 G-----YYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYP 150
Score = 33.1 bits (74), Expect(2) = 6e-25
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRPKS 512
P+ ++R++ FDN +QVQ + F+ +P S
Sbjct: 150 PNGFIRIIGFDNVRQVQCISFIAYKPPS 177
[245][TOP]
>UniRef100_O22487 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
RepID=O22487_ORYSA
Length = 175
Score = 102 bits (255), Expect(2) = 6e-25
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPL+ E + Q++Y++ + W+PCLEF++ Y N
Sbjct: 48 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR---- 103
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL+E+ KA+P
Sbjct: 104 ---SPGYYDGRYWTMWKLPMFGCTDATQVLKELEDAKKAYP 141
Score = 35.8 bits (81), Expect(2) = 6e-25
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 414 APRPSPDAYVRLLAFDNQKQVQIMGFLVQRP 506
A + PDA+VR++ FDN +QVQ++ + +P
Sbjct: 136 AKKAYPDAFVRIIGFDNVRQVQLISLIANKP 166
[246][TOP]
>UniRef100_Q9FRZ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ3_WHEAT
Length = 173
Score = 103 bits (256), Expect(2) = 6e-25
Identities = 49/101 (48%), Positives = 61/101 (60%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW K FET SYLPPLS E + QVDY++ + W+PCLEF++ + + S
Sbjct: 46 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS---- 101
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
S YYD RYWTMWKLPMFGC + QVL E+ K +P
Sbjct: 102 ---SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYP 139
Score = 35.4 bits (80), Expect(2) = 6e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR+ FDN +QVQ + F+ RP
Sbjct: 139 PDAYVRVNGFDNLRQVQCVSFIAFRP 164
[247][TOP]
>UniRef100_Q9SNW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SNW4_9POAL
Length = 168
Score = 102 bits (254), Expect(2) = 6e-25
Identities = 51/141 (36%), Positives = 76/141 (53%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAPAQANQMMVWTPVNNKMFETFSYLPP 187
A S+ S A + +S+ + + V+ + M VW K FET SYLPP
Sbjct: 3 ASSATSVAPFQGLKSTAGLAVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 62
Query: 188 LSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPM 367
LS+E + Q+D+++ + W+PCLEF++ + R + YYD RYWTMWKLPM
Sbjct: 63 LSEEALLKQIDFLIRSKWVPCLEFSKVGFIF-------RVHGSTPGYYDGRYWTMWKLPM 115
Query: 368 FGCREPMQVLREIVACTKAFP 430
FGC + QV++E+ K +P
Sbjct: 116 FGCTDASQVIKEVEEVKKEYP 136
Score = 36.2 bits (82), Expect(2) = 6e-25
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 429 PDAYVRLLAFDNQKQVQIMGFLVQRP 506
PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 136 PDAYVRIIGFDNIRQVQCVSFIAFKP 161
[248][TOP]
>UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR
Length = 183
Score = 117 bits (293), Expect = 7e-25
Identities = 63/152 (41%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Frame = +2
Query: 8 AKSSVSAAVARPARSSVRPMAALKPAVNAAPVAAP-----------AQANQMMVWTPVNN 154
A ++++AA + V P LK +++A PV + M VW P+
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67
Query: 155 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 334
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121
Query: 335 NRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
RYWTMWKLPMFGC +P QV+ E+ KA+P
Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 153
[249][TOP]
>UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic
n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY
Length = 181
Score = 117 bits (293), Expect = 7e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEF-ETEHGFVYREN---- 113
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 114 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 153
[250][TOP]
>UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2
Tax=Nicotiana RepID=RBS1_NICSY
Length = 180
Score = 117 bits (293), Expect = 7e-25
Identities = 53/101 (52%), Positives = 70/101 (69%)
Frame = +2
Query: 128 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 307
M VW P+N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 308 GSVSCLYYDNRYWTMWKLPMFGCREPMQVLREIVACTKAFP 430
+ S YYD RYWTMWKLPMFGC + QVL E+ KA+P
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152