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[1][TOP]
>UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE
Length = 115
Score = 231 bits (589), Expect = 3e-59
Identities = 115/115 (100%), Positives = 115/115 (100%)
Frame = +2
Query: 47 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 226
MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL
Sbjct: 1 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 60
Query: 227 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL
Sbjct: 61 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 115
[2][TOP]
>UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp.
RCC299 RepID=C1FIQ5_9CHLO
Length = 118
Score = 78.2 bits (191), Expect = 5e-13
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Frame = +2
Query: 77 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 250
VAAKP +R AR A V KAT ++ V KK A+LS L A PA A+VDER+NGD
Sbjct: 12 VAAKPAARKVARKAT--VAKATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGD 68
Query: 251 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 391
GTG G+ND +LG++LL + +++ +F QKD G E+ D GL L
Sbjct: 69 GTGLILGINDEILGFILLTIPALVFSQFFYAQKDDGIAAGGENDDSGLSL 118
[3][TOP]
>UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1
Tax=Spinacia oleracea RepID=PSBW_SPIOL
Length = 137
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +2
Query: 140 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 319
TT + + ++L+ A ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG
Sbjct: 56 TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115
Query: 320 MWAIWFIGQKDLGDFEDADDGLKL 391
+WA++F+ L ED + GL L
Sbjct: 116 IWALYFVYASGLE--EDEESGLSL 137
[4][TOP]
>UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SYI0_SOYBN
Length = 132
Score = 74.7 bits (182), Expect = 5e-12
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Frame = +2
Query: 65 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKK----------VAMLSTLPATLAAH 211
RA V +PV S + + + KA VR + +K ++L+ A +
Sbjct: 15 RAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMSS 74
Query: 212 PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL L
Sbjct: 75 PAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASTLE--EDEESGLSL 132
[5][TOP]
>UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHC2_MEDTR
Length = 136
Score = 73.9 bits (180), Expect = 9e-12
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +2
Query: 161 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 340
A +A +S ATL++ A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI
Sbjct: 64 ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121
Query: 341 GQKDLGDFEDADDGLKL 391
L ED D GL L
Sbjct: 122 YASSLD--EDEDSGLSL 136
[6][TOP]
>UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T2W3_SOYBN
Length = 133
Score = 72.8 bits (177), Expect = 2e-11
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Frame = +2
Query: 65 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKKVAMLSTL-----------PATLAA 208
R V +PV S + + + KA VR + +K + S L AT+++
Sbjct: 15 RTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMGASLLAAAAAATMSS 74
Query: 209 HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 388
A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL
Sbjct: 75 PAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLE--EDEESGLS 132
Query: 389 L 391
L
Sbjct: 133 L 133
[7][TOP]
>UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWM3_SOYBN
Length = 136
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Frame = +2
Query: 41 IKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--- 211
++ ++L +P + + + G R + ++ K ++V+ + + M ++L A +A
Sbjct: 19 VQKRSLGFSSPVLGLPAMGKVG-RVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMS 77
Query: 212 -PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 388
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL
Sbjct: 78 GPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLE--EDEESGLS 135
Query: 389 L 391
L
Sbjct: 136 L 136
[8][TOP]
>UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum
bicolor RepID=C5XLL1_SORBI
Length = 126
Score = 72.4 bits (176), Expect = 3e-11
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Frame = +2
Query: 47 MQALSARAPR--VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-------- 196
M +SA A VA ++R A + ++ VR AK A +S A
Sbjct: 1 MATVSAAAATTVVARAAIARPNALGLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAA 60
Query: 197 ---TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 367
T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ + DL E
Sbjct: 61 GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLD--E 118
Query: 368 DADDGLKL 391
D + GL L
Sbjct: 119 DEESGLSL 126
[9][TOP]
>UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUM2_VITVI
Length = 135
Score = 72.4 bits (176), Expect = 3e-11
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Frame = +2
Query: 71 PRVAAKP----VSRSGARSAVTVVCKATTVRSEVAKK-------------VAMLSTLPAT 199
PRV +P V S A + V+ K V + +K ++++ A
Sbjct: 14 PRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKMGMGASLMAAACAA 73
Query: 200 LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADD 379
+ PA ALVDERM+ +GTG PFG+++ LGW+L GVFG +WA++F+ L ED +
Sbjct: 74 TMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFVYTATLE--EDEES 131
Query: 380 GLKL 391
GL L
Sbjct: 132 GLSL 135
[10][TOP]
>UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B4FUI4_MAIZE
Length = 127
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Frame = +2
Query: 77 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 223
VA ++R A + ++ VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 224 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ GL L
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127
[11][TOP]
>UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9S4T1_RICCO
Length = 132
Score = 71.2 bits (173), Expect = 6e-11
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +2
Query: 149 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 328
RS ++++++ + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+
Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113
Query: 329 IWFIGQKDLGDFEDADDGLKL 391
+ + L D D D GL L
Sbjct: 114 FYTVYTSTLDD--DEDSGLSL 132
[12][TOP]
>UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TM37_MAIZE
Length = 127
Score = 71.2 bits (173), Expect = 6e-11
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Frame = +2
Query: 77 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 223
VA ++R A + + VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 224 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ GL L
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127
[13][TOP]
>UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QVP6_VITVI
Length = 135
Score = 71.2 bits (173), Expect = 6e-11
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = +2
Query: 11 TSLRRANSTNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTL 190
TSL RA+ + + +S+ P + +++ G V + + S++ ++M ++L
Sbjct: 11 TSLVRASVASKGLNGISS--PVLGLPAMAKKGR---VRCMSEEKPCGSDMGSSISMGASL 65
Query: 191 PATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 355
A AA PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F L
Sbjct: 66 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 125
Query: 356 GDFEDADDGLKL 391
ED + GL L
Sbjct: 126 E--EDDESGLSL 135
[14][TOP]
>UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SEQ6_PHYPA
Length = 142
Score = 70.9 bits (172), Expect = 7e-11
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Frame = +2
Query: 74 RVAAKPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDE 235
R AA+PV+ + +VC S ++A T AT+A AHP FALVDE
Sbjct: 32 RAAARPVAGVPVLAMPRIVCSLEKKESNKGDVNGLPQLAAAVTSAATMAYAHPVFALVDE 91
Query: 236 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
R++ +GTG GV++P L W+L+GV +WA++F L + +D D GL L
Sbjct: 92 RLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGLSL 142
[15][TOP]
>UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SZ65_RICCO
Length = 134
Score = 70.5 bits (171), Expect = 1e-10
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2
Query: 152 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 331
S VA VA S + AT A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF +W++
Sbjct: 59 SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116
Query: 332 WFIGQKDLGDFEDADDGLKL 391
+ + L ED D L L
Sbjct: 117 YTVYTSTLD--EDDDSALSL 134
[16][TOP]
>UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana
RepID=Q41908_ARATH
Length = 133
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +2
Query: 68 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 247
AP + P+ + ++ K T +S A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKKETSQSWGPGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 248 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
+GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL L
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSTLE--EDEESGLSL 133
[17][TOP]
>UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9GS65_POPTR
Length = 134
Score = 69.7 bits (169), Expect = 2e-10
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 143 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 316
TV E +K ++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF
Sbjct: 52 TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111
Query: 317 TMWAIWFIGQKDLGDFEDADDGLKL 391
+W+++F+ L ED D G+ L
Sbjct: 112 FIWSLYFVYTSSLD--EDEDSGMSL 134
[18][TOP]
>UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6T2W4_MAIZE
Length = 131
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Frame = +2
Query: 26 ANSTNIKMQALSARAPRVA------AKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLST 187
A T + AL AR+ RV A PVS GA +++ A T
Sbjct: 23 ALGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTA------------- 69
Query: 188 LPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 367
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D +
Sbjct: 70 -----SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DED 123
Query: 368 DADDGLKL 391
+ GL L
Sbjct: 124 EESGGLSL 131
[19][TOP]
>UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6SMK2_MAIZE
Length = 130
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Frame = +2
Query: 35 TNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA----TL 202
T I +A AR P P R+ + K + V+ K A S L A T
Sbjct: 10 TTIVARAAIAR-PNALGLPALRARSERVRCSYAKDAKNAAPVSTKGAGASLLAAAGAVTA 68
Query: 203 AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 382
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ G
Sbjct: 69 SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGG 127
Query: 383 LKL 391
L L
Sbjct: 128 LSL 130
[20][TOP]
>UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center
n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM
Length = 133
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +2
Query: 56 LSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDE 235
++ AP + P+ + ++ K V + A A + + ++PA ALVD+
Sbjct: 24 VAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVMSNPAMALVDD 83
Query: 236 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
RM+ +GTG PFG+++ +LGW+LLGVFG +W +F L ED + GL L
Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD--EDEESGLSL 133
[21][TOP]
>UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=PSBW_ARATH
Length = 133
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/108 (35%), Positives = 58/108 (53%)
Frame = +2
Query: 68 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 247
AP + P+ + ++ K V A A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 248 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
+GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL L
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE--EDEESGLSL 133
[22][TOP]
>UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans
RepID=Q7XYI4_BIGNA
Length = 147
Score = 68.6 bits (166), Expect = 4e-10
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +2
Query: 32 STNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRS-EVAKKVAMLSTLPATLAA 208
S+ + L A A R PVS A T K + ++ + +K + L A A
Sbjct: 24 SSALSSSNLGATAIRSRVSPVSSVRAGRMATFAQKPSMKQNMQNFQKTMGAAGLAAVGAL 83
Query: 209 H--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 382
H PA ALVD R+NGDG G P G+ND L ++L GVF T+W ++ K + D +D D G
Sbjct: 84 HQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVYATSVKGISDNDDEDSG 143
Query: 383 LKL 391
+ L
Sbjct: 144 MGL 146
[23][TOP]
>UniRef100_Q10NF9 Retrotransposon protein, putative, unclassified, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q10NF9_ORYSJ
Length = 840
Score = 68.6 bits (166), Expect = 4e-10
Identities = 63/173 (36%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Frame = -1
Query: 593 HTTPQLHRRAADKAVEDSTAPGRFKRALPLPH--------PHPPLHRRLRTAKNRGHCSS 438
H +P HRR+ + +P ++ P PH P P R R+ + R SS
Sbjct: 278 HRSPSPHRRSHIRR----KSPPFVRQRSPSPHHRRSPGRAPRSPSPARHRSPRRR---SS 330
Query: 437 HDYEAAKKGSTTKPFTASGHRRRPRSRPGPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGG 258
D + +P + S RRRPRS P P R R P+ RRRP PSPGR R R
Sbjct: 331 LDRHWSPSPGRRRPRSPSPGRRRPRS-PSPGRRRPRSPSPGRRRPRSPSPGR-RRPRSPS 388
Query: 257 QCRRRSCAHRPGRRRGGQP-G*PAGCSAWRPSWPPRCGRWWPCTPRSRQSERR 102
RRR + PGRRR P G P S RP R P +PRSR + RR
Sbjct: 389 PGRRRPRSRSPGRRRSPSPRGSPRLRSPKRP-------RRSPISPRSRSANRR 434
[24][TOP]
>UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla
CCMP1545 RepID=C1N1F2_9CHLO
Length = 119
Score = 68.6 bits (166), Expect = 4e-10
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Frame = +2
Query: 77 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 250
+ AKP++R ++ VV KAT +++ K A+LS +LAA PA A+VDER+NGD
Sbjct: 12 LVAKPLARK-VQARKAVVSKATVAKAQAPTK-AVLSAAVVSLAAQALPALAVVDERLNGD 69
Query: 251 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 391
GTG G+ND +LG+VLL + +++ ++ QKD G ++ D GL L
Sbjct: 70 GTGLILGLNDELLGFVLLTIPTLIFSQFYAAQKDEGIEAGGKNDDSGLSL 119
[25][TOP]
>UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJA9_9ROSI
Length = 133
Score = 68.6 bits (166), Expect = 4e-10
Identities = 34/113 (30%), Positives = 61/113 (53%)
Frame = +2
Query: 53 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 232
++ + V P + + ++ K T ++++ + A + PA ALVD
Sbjct: 23 SVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVD 82
Query: 233 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
ER++ +GTG PFG+++ +L W+LLGVF +W+++F+ L ED D G+ L
Sbjct: 83 ERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYTSSLD--EDEDSGMSL 133
[26][TOP]
>UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ET99_ORYSJ
Length = 107
Score = 68.2 bits (165), Expect = 5e-10
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Frame = +2
Query: 107 ARSAVTVVCKATT--------VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGR 262
A +A +VV +A +R+ +++ A S L A PA ALVDERM+ +GTG
Sbjct: 6 AAAATSVVARAVLAGPLGLPQMRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGL 65
Query: 263 PFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
G+++ +LGW+LLGVFG +W+++ I DL + E++ GL L
Sbjct: 66 SLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 107
[27][TOP]
>UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C3A9_VITVI
Length = 70
Score = 68.2 bits (165), Expect = 5e-10
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +2
Query: 176 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 355
M + +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F L
Sbjct: 1 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 60
Query: 356 GDFEDADDGLKL 391
ED + GL L
Sbjct: 61 E--EDDESGLSL 70
[28][TOP]
>UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXP0_PHYPA
Length = 109
Score = 67.8 bits (164), Expect = 6e-10
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Frame = +2
Query: 86 KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDERMNG 247
+PVS A +VC A S+ + ++A T ATLA AHP FALVDER++
Sbjct: 2 EPVSGLPALRMPKIVCSAEKKESQTEELSGFPQLAAAVTSAATLAYAHPVFALVDERLST 61
Query: 248 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
+GTG G+++ L W+L+GV +WA++F D+G GL L
Sbjct: 62 EGTGLGLGISNTKLTWILVGVTALIWALYFFVLLDVGQRVTMTSGLDL 109
[29][TOP]
>UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3
Tax=Oryza sativa RepID=PSBW_ORYSJ
Length = 124
Score = 67.8 bits (164), Expect = 6e-10
Identities = 40/107 (37%), Positives = 61/107 (57%)
Frame = +2
Query: 71 PRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGD 250
P++ A+ R + A V+ A +AM +T A PA ALVDERM+ +
Sbjct: 25 PQMRARRSERVRCNYSKEAATPAAAVKGAGASLLAMAAT------AAPAMALVDERMSTE 78
Query: 251 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
GTG G+++ +LGW+LLGVFG +W+++ I DL + E++ GL L
Sbjct: 79 GTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 124
[30][TOP]
>UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWZ8_SOYBN
Length = 133
Score = 67.0 bits (162), Expect = 1e-09
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +2
Query: 173 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 352
++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+
Sbjct: 63 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTST 122
Query: 353 LGDFEDADDGLKL 391
L + E++ GL L
Sbjct: 123 LEEGEES--GLSL 133
[31][TOP]
>UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PEP9_POPTR
Length = 134
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/113 (32%), Positives = 59/113 (52%)
Frame = +2
Query: 53 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 232
+L V P R + ++ K + ++++ + A + PA ALVD
Sbjct: 24 SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVD 83
Query: 233 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
ERM+ +GTG PFG+++ +L W+LLGVF +WA++F L ED + GL L
Sbjct: 84 ERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYTATLE--EDEESGLSL 134
[32][TOP]
>UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam
RepID=Q8W536_9FABA
Length = 96
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 176 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 355
M + A + PA ALVDER++ +GTG PFG+++ +LGW+L VFG +W +FI L
Sbjct: 27 MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSL 86
Query: 356 GDFEDADDGLKL 391
ED + GL L
Sbjct: 87 E--EDEESGLSL 96
[33][TOP]
>UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora
stellata RepID=B5A4J5_GYMST
Length = 147
Score = 65.5 bits (158), Expect = 3e-09
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 89 PVSRSGARSAVTVVCKATTVRSEVAKKVAMLST---LPATLAAH--PAFALVDERMNGDG 253
P +R AR T V + +E K L AT A H PA ALVD R+NGDG
Sbjct: 41 PATRMMARQGRTAVYAKKGLNTESLKNFQRNMAAVGLSATAALHQLPAEALVDARLNGDG 100
Query: 254 TGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 391
G P G+ND L ++L GVF +WA + K + + +D D GL +
Sbjct: 101 AGIPLGINDSRLFFILAGVFTLVWAAYSTSVKGISNNDDDDSGLSI 146
[34][TOP]
>UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TMB3_MAIZE
Length = 127
Score = 63.9 bits (154), Expect = 9e-09
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = +2
Query: 173 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 352
++L+ + + P ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ +
Sbjct: 57 SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTST 116
Query: 353 LGDFEDADDGLKL 391
L ED D GL L
Sbjct: 117 LD--EDDDSGLSL 127
[35][TOP]
>UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SEQ5_PHYPA
Length = 64
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 206 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 385
AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F L + +D D GL
Sbjct: 4 AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGL 62
Query: 386 KL 391
L
Sbjct: 63 SL 64
[36][TOP]
>UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PQQ7_PICSI
Length = 149
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +2
Query: 197 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 376
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D
Sbjct: 87 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 144
Query: 377 DGLKL 391
GL L
Sbjct: 145 SGLSL 149
[37][TOP]
>UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NLC2_PICSI
Length = 146
Score = 63.2 bits (152), Expect = 2e-08
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +2
Query: 197 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 376
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F G ED D
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYS--GVKEDED 141
Query: 377 DGLKL 391
GL L
Sbjct: 142 SGLSL 146
[38][TOP]
>UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NL01_PICSI
Length = 146
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +2
Query: 197 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 376
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 141
Query: 377 DGLKL 391
GL L
Sbjct: 142 SGLSL 146
[39][TOP]
>UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU
Length = 162
Score = 62.4 bits (150), Expect = 3e-08
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +2
Query: 119 VTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWV 298
+ +V + T E+ K+VA L + + PA A+VD+R+NGDGTG P G+ND LG +
Sbjct: 68 IRLVTMSATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGII 127
Query: 299 LLGVFGTMWAIWFIGQKD----LGDFEDADDGLKL 391
L V ++ ++FI K + +D D GL L
Sbjct: 128 LATVPLAIFGLYFIAGKQDASIVAGGKDDDSGLSL 162
[40][TOP]
>UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1
Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA
Length = 156
Score = 61.6 bits (148), Expect = 5e-08
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +2
Query: 23 RANSTNIKMQALSARAPRVAAKPVSRSGARSAVT----VVCKATTVRSEVAKKVAMLSTL 190
R S+ I + LS+ +P P R+G R A V +AT E K+V S L
Sbjct: 28 RDKSSTIMLTILSSLSPICNLSP-RRAGPRQASNQRHGVTVRATP--QEAGKQVFGTSML 84
Query: 191 PATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI-GQKDLG-- 358
+++ PA A+VD+R+NGDGTG P G+ND LG +L V +++++FI G++D G
Sbjct: 85 ISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASVPLAIFSLYFIAGKQDAGIE 144
Query: 359 -DFEDADDGLKL 391
++ D GL L
Sbjct: 145 NGGKNDDSGLSL 156
[41][TOP]
>UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens
RepID=Q9AXN9_PHYPA
Length = 69
Score = 60.8 bits (146), Expect = 8e-08
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +2
Query: 194 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 370
ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F L + +D
Sbjct: 4 ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYFSYSSTLPEGDD 63
Query: 371 ADDGLKL 391
D GL L
Sbjct: 64 -DSGLDL 69
[42][TOP]
>UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXN8_PHYPA
Length = 158
Score = 58.5 bits (140), Expect = 4e-07
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Frame = +2
Query: 32 STNIKMQALSARAPRVAA--KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTL 190
+T + +L++ + AA KPV+ A VVC A S+ + ++A T
Sbjct: 21 ATRLATTSLASSSSGFAATLKPVAGLPALRMPKVVCAAERSESKAERVNGVAQLAAAVTS 80
Query: 191 PATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 340
ATLA +HP ALVDER++ +GTG G+++ L W+L+GV +W ++ +
Sbjct: 81 AATLAYSHPVLALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWTLYLL 131
[43][TOP]
>UniRef100_A4X9E5 Putative uncharacterized protein n=1 Tax=Salinispora tropica
CNB-440 RepID=A4X9E5_SALTO
Length = 328
Score = 56.2 bits (134), Expect = 2e-06
Identities = 54/174 (31%), Positives = 62/174 (35%)
Frame = -1
Query: 572 RRAADKAVEDSTAPGRFKRALPLPHPHPPLHRRLRTAKNRGHCSSHDYEAAKKGSTTKPF 393
RRA++ P R R P P P P R A N S A + P
Sbjct: 118 RRASEPPAPAGARPAR-PRPPPPPSPGSPAAGRTAAATNHRQPSGPVRSACPPSTRPAPL 176
Query: 392 TASGHRRRPRSRPGPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGGQCRRRSCAHRPGRRR 213
RR R P P GR P G PGR R RR G+ RRS HRPGR
Sbjct: 177 P-----RRRRGPPHPCGRAAGRSAGAGTPPPGTRPGRSRRARRAGRAARRS--HRPGRLT 229
Query: 212 GGQPG*PAGCSAWRPSWPPRCGRWWPCTPRSRQSERRSGSRAWQPRGGRERTGP 51
G+ TP R+S R+G R+ QP ER GP
Sbjct: 230 AGR------------------------TPAGRRSTDRAGRRSPQP---SERPGP 256
[44][TOP]
>UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Tax=Mesostigma viride
RepID=A2SY30_MESVI
Length = 128
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/107 (35%), Positives = 58/107 (54%)
Frame = +2
Query: 50 QALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALV 229
Q L AR P+ AA+ V AR AV VC+A + VA A +++ A A PA A++
Sbjct: 22 QRLVARKPQAAAR-VPAKCARKAV--VCQAQKNEAAVAVSAAAIASSVAFAA--PAQAII 76
Query: 230 DERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 370
++ M +G G G+N LG+V+LG F +W+++ + L ED
Sbjct: 77 EDAMYTEGAGIALGLNSGALGFVMLGAFTLVWSLYSSYTRSLDSSED 123
[45][TOP]
>UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC
Length = 1279
Score = 54.7 bits (130), Expect = 6e-06
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -2
Query: 343 ADEPDSPHGAEDAQQDPAQDGVVHAEGAASAVAVHALIDQGEGGVGSQGSRQGAQHGDLL 164
A E + G+ A D + G +A GA A G G G GS GA+ G +
Sbjct: 251 ASEDRTGSGSGPAPGDGSAPGAAYASGAGHAPG------DGTGPGGGYGS--GARPGPGV 302
Query: 163 GHLAADGGGLAHHGHGRASAGAAHGLGSHAGGASG 59
GH+ DG G H GR + GA H GS AGGA+G
Sbjct: 303 GHVPGDGAGAGHVPGGRTAPGAGHAPGSGAGGAAG 337