AV389410 ( CM041b04_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV389410  CM041b04_r
         (552 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q93WD2 Chlorophyll a-b binding protein CP29 n=2 Tax=Ch...   351   2e-95
UniRef100_A2SY49 Light-harvesting chlorophyll-a/b binding protei...   322   9e-87
UniRef100_A4QPJ4 Chloroplast light-harvesting protein CP29 Lhcb4...   219   8e-56
UniRef100_Q7XYQ5 Chlorophyll a/b-binding protein CP29 n=1 Tax=Bi...   179   2e-43
UniRef100_B5A4H8 Chlorophyll a/b binding protein CP29 n=1 Tax=Gy...   173   7e-42
UniRef100_A4S8L5 Possibly CP29, chlorophyll a/b binding n=1 Tax=...   154   4e-36
UniRef100_A9T2F8 Predicted protein n=1 Tax=Physcomitrella patens...   149   1e-34
UniRef100_A9U3M1 Predicted protein n=1 Tax=Physcomitrella patens...   146   9e-34
UniRef100_B9SLN2 Chlorophyll A/B binding protein, putative n=1 T...   146   1e-33
UniRef100_A9P071 Putative uncharacterized protein n=1 Tax=Picea ...   144   4e-33
UniRef100_A9NYR8 Putative uncharacterized protein n=1 Tax=Picea ...   144   4e-33
UniRef100_A9NKX0 Putative uncharacterized protein n=1 Tax=Picea ...   144   4e-33
UniRef100_Q3B9U8 CP29-like light-harvesting chlorophyll a/b bind...   142   1e-32
UniRef100_Q9S7W1 Chlorophyll a-b binding protein CP29.3, chlorop...   142   1e-32
UniRef100_Q07473 Chlorophyll a-b binding protein CP29.1, chlorop...   142   1e-32
UniRef100_C1K5D1 Chloroplast chlorophyll A-B binding protein n=1...   142   2e-32
UniRef100_A7PP40 Chromosome chr8 scaffold_23, whole genome shotg...   142   2e-32
UniRef100_B7SB30 LHCB4 n=1 Tax=Bambusa oldhamii RepID=B7SB30_BAMOL    141   3e-32
UniRef100_Q9XQB2 Chlorophyll a/b binding protein CP29 n=1 Tax=Vi...   141   4e-32
UniRef100_B9HHN0 Light-harvesting complex II protein Lhcb8 n=1 T...   141   4e-32
UniRef100_B7FIZ5 Putative uncharacterized protein n=1 Tax=Medica...   141   4e-32
UniRef100_B9SQ36 Chlorophyll A/B binding protein, putative n=1 T...   140   5e-32
UniRef100_A9PK34 Putative uncharacterized protein n=1 Tax=Populu...   140   5e-32
UniRef100_B7SAW1 Chloroplast chlorophyll a/b binding protein cab...   140   6e-32
UniRef100_B1N8L8 Chloroplast chlorophyll a/b-binding protein (Fr...   140   8e-32
UniRef100_O24561 Putative uncharacterized protein n=1 Tax=Zea ma...   139   1e-31
UniRef100_C5XBI9 Putative uncharacterized protein Sb02g036260 n=...   138   2e-31
UniRef100_B4FJG1 Putative uncharacterized protein n=1 Tax=Zea ma...   138   2e-31
UniRef100_C1N6G9 Chlorophyll a/b-binding protein CP29, chloropla...   138   3e-31
UniRef100_Q6Z411 Os07g0558400 protein n=3 Tax=Oryza sativa RepID...   137   4e-31
UniRef100_Q0PWS7 Chloroplast pigment-binding protein CP29 n=1 Ta...   137   5e-31
UniRef100_Q9XF88 Chlorophyll a-b binding protein CP29.2, chlorop...   137   5e-31
UniRef100_C6TDC5 Putative uncharacterized protein n=1 Tax=Glycin...   137   7e-31
UniRef100_B9HCM1 Light-harvesting complex II protein Lhcb4 n=2 T...   135   9e-31
UniRef100_C0HF02 Putative uncharacterized protein n=1 Tax=Zea ma...   136   1e-30
UniRef100_B9IG87 Predicted protein n=1 Tax=Populus trichocarpa R...   135   2e-30
UniRef100_A9PJF0 Putative uncharacterized protein n=1 Tax=Populu...   135   2e-30
UniRef100_Q9XF88-2 Isoform 2 of Chlorophyll a-b binding protein ...   134   6e-30
UniRef100_C1EHQ9 Chlorophyll a/b-binding protein CP29, chloropla...   130   5e-29
UniRef100_A2SY24 Chloroplast light-harvesting complex protein CP...   125   2e-27
UniRef100_A4QPH7 Chloroplast light-harvesting protein CP29 Lhcb4...   123   1e-26
UniRef100_A3BL40 Putative uncharacterized protein n=1 Tax=Oryza ...   102   1e-20
UniRef100_C0PRU3 Putative uncharacterized protein n=1 Tax=Picea ...    96   2e-18
UniRef100_C0PHS5 Putative uncharacterized protein n=1 Tax=Zea ma...    92   2e-17
UniRef100_B4FXB0 Chlorophyll a-b binding protein CP24 n=1 Tax=Ze...    78   4e-13
UniRef100_P36494 Chlorophyll a-b binding protein CP24, chloropla...    76   2e-12
UniRef100_B9MT12 Light-harvesting complex I protein Lhca6 n=1 Ta...    64   6e-09
UniRef100_A9PJQ2 Putative uncharacterized protein n=1 Tax=Populu...    64   6e-09
UniRef100_A9NLZ0 Putative uncharacterized protein n=1 Tax=Picea ...    64   7e-09
UniRef100_C6TLU9 Putative uncharacterized protein n=1 Tax=Glycin...    64   1e-08
UniRef100_P13869 Chlorophyll a-b binding protein, chloroplastic ...    64   1e-08
UniRef100_UPI000198429C PREDICTED: hypothetical protein n=1 Tax=...    63   2e-08
UniRef100_A7PDT5 Chromosome chr11 scaffold_13, whole genome shot...    63   2e-08
UniRef100_A5BBT6 Putative uncharacterized protein n=1 Tax=Vitis ...    63   2e-08
UniRef100_Q41038 Type II chlorophyll a/b binding protein from ph...    62   2e-08
UniRef100_C6T8S8 Putative uncharacterized protein n=1 Tax=Glycin...    62   2e-08
UniRef100_B9GML1 Light-harvesting complex I protein Lhca2 n=1 Ta...    62   2e-08
UniRef100_A9PGU3 Putative uncharacterized protein n=1 Tax=Populu...    62   2e-08
UniRef100_B9RR76 Chlorophyll A/B binding protein, putative n=1 T...    62   4e-08
UniRef100_B4YYB1 ST49-6 (Fragment) n=1 Tax=Thellungiella halophi...    62   4e-08
UniRef100_Q9SYW8 Lhca2 protein n=1 Tax=Arabidopsis thaliana RepI...    61   5e-08
UniRef100_Q9M320 Lhca2 protein n=1 Tax=Arabidopsis thaliana RepI...    61   5e-08
UniRef100_B6SMV5 Chlorophyll a-b binding protein n=1 Tax=Zea may...    61   5e-08
UniRef100_A4URF4 LhCa2 protein n=1 Tax=Brassica juncea RepID=A4U...    61   5e-08
UniRef100_UPI0001982B54 PREDICTED: hypothetical protein n=1 Tax=...    60   8e-08
UniRef100_C6TKB2 Putative uncharacterized protein n=1 Tax=Glycin...    60   8e-08
UniRef100_A7QP61 Chromosome chr1 scaffold_136, whole genome shot...    60   8e-08
UniRef100_A5B4F0 Putative uncharacterized protein n=1 Tax=Vitis ...    60   1e-07
UniRef100_A9TV00 Predicted protein (Fragment) n=1 Tax=Physcomitr...    59   2e-07
UniRef100_Q9IGT7 163R* (Fragment) n=1 Tax=Porcine adenovirus 3 R...    56   2e-06
UniRef100_UPI000186B3FA hypothetical protein BRAFLDRAFT_112557 n...    55   3e-06
UniRef100_C5XEJ9 Putative uncharacterized protein Sb03g029150 n=...    55   3e-06
UniRef100_C1MVU7 Predicted protein n=1 Tax=Micromonas pusilla CC...    55   3e-06
UniRef100_A7P9F6 Chromosome chr3 scaffold_8, whole genome shotgu...    55   3e-06
UniRef100_A4QPI5 Chloroplast light-harvesting complex I protein ...    55   3e-06
UniRef100_B4VDS7 Putative uncharacterized protein n=1 Tax=Strept...    55   4e-06
UniRef100_C4RPE1 Hsp70-like protein n=1 Tax=Micromonospora sp. A...    54   6e-06
UniRef100_UPI0001925155 PREDICTED: hypothetical protein, partial...    54   8e-06
UniRef100_B3M6C2 GF24314 n=1 Tax=Drosophila ananassae RepID=B3M6...    54   8e-06
UniRef100_Q090T6 Putative uncharacterized protein n=1 Tax=Stigma...    54   1e-05
UniRef100_B8BPE3 Putative uncharacterized protein n=1 Tax=Oryza ...    54   1e-05
graphical overview:
alignment
UniRef100_Q93WD2 UniRef100_Q93WD2 UniRef100_A2SY49 UniRef100_A2SY49 UniRef100_A4QPJ4 UniRef100_A4QPJ4 UniRef100_Q7XYQ5 UniRef100_Q7XYQ5 UniRef100_B5A4H8 UniRef100_B5A4H8 UniRef100_A4S8L5 UniRef100_A4S8L5 UniRef100_A9T2F8 UniRef100_A9T2F8 UniRef100_A9U3M1 UniRef100_A9U3M1 UniRef100_B9SLN2 UniRef100_B9SLN2 UniRef100_A9P071 UniRef100_A9P071 UniRef100_A9NYR8 UniRef100_A9NYR8 UniRef100_A9NKX0 UniRef100_A9NKX0 UniRef100_Q3B9U8 UniRef100_Q3B9U8 UniRef100_Q9S7W1 UniRef100_Q9S7W1 UniRef100_Q07473 UniRef100_Q07473 UniRef100_C1K5D1 UniRef100_C1K5D1 UniRef100_A7PP40 UniRef100_A7PP40 UniRef100_B7SB30 UniRef100_B7SB30 UniRef100_Q9XQB2 UniRef100_Q9XQB2 UniRef100_B9HHN0 UniRef100_B9HHN0 UniRef100_B7FIZ5 UniRef100_B7FIZ5 UniRef100_B9SQ36 UniRef100_B9SQ36 UniRef100_A9PK34 UniRef100_A9PK34 UniRef100_B7SAW1 UniRef100_B7SAW1 UniRef100_B1N8L8 UniRef100_B1N8L8 UniRef100_O24561 UniRef100_O24561 UniRef100_C5XBI9 UniRef100_C5XBI9 UniRef100_B4FJG1 UniRef100_B4FJG1 UniRef100_C1N6G9 UniRef100_C1N6G9 UniRef100_Q6Z411 UniRef100_Q6Z411 UniRef100_Q0PWS7 UniRef100_Q0PWS7 UniRef100_Q9XF88 UniRef100_Q9XF88 UniRef100_C6TDC5 UniRef100_C6TDC5 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_C0HF02 UniRef100_C0HF02 UniRef100_B9IG87 UniRef100_B9IG87 UniRef100_A9PJF0 UniRef100_A9PJF0 UniRef100_Q9XF88-2 UniRef100_Q9XF88-2 UniRef100_C1EHQ9 UniRef100_C1EHQ9 UniRef100_A2SY24 UniRef100_A2SY24 UniRef100_A4QPH7 UniRef100_A4QPH7 UniRef100_A3BL40 UniRef100_A3BL40 UniRef100_C0PRU3 UniRef100_C0PRU3 UniRef100_C0PHS5 UniRef100_C0PHS5 UniRef100_B4FXB0 UniRef100_B4FXB0 UniRef100_P36494 UniRef100_P36494 UniRef100_B9MT12 UniRef100_B9MT12 UniRef100_A9PJQ2 UniRef100_A9PJQ2 UniRef100_A9NLZ0 UniRef100_A9NLZ0 UniRef100_C6TLU9 UniRef100_C6TLU9 UniRef100_P13869 UniRef100_P13869 UniRef100_UPI000198429C UniRef100_UPI000198429C UniRef100_A7PDT5 UniRef100_A7PDT5 UniRef100_A5BBT6 UniRef100_A5BBT6 UniRef100_Q41038 UniRef100_Q41038 UniRef100_C6T8S8 UniRef100_C6T8S8 UniRef100_B9GML1 UniRef100_B9GML1 UniRef100_A9PGU3 UniRef100_A9PGU3 UniRef100_B9RR76 UniRef100_B9RR76 UniRef100_B4YYB1 UniRef100_B4YYB1 UniRef100_Q9SYW8 UniRef100_Q9SYW8 UniRef100_Q9M320 UniRef100_Q9M320 UniRef100_B6SMV5 UniRef100_B6SMV5 UniRef100_A4URF4 UniRef100_A4URF4 UniRef100_UPI0001982B54 UniRef100_UPI0001982B54 UniRef100_C6TKB2 UniRef100_C6TKB2 UniRef100_A7QP61 UniRef100_A7QP61 UniRef100_A5B4F0 UniRef100_A5B4F0 UniRef100_A9TV00 UniRef100_A9TV00 UniRef100_Q9IGT7 UniRef100_Q9IGT7 UniRef100_UPI000186B3FA UniRef100_UPI000186B3FA UniRef100_C5XEJ9 UniRef100_C5XEJ9 UniRef100_C1MVU7 UniRef100_C1MVU7 UniRef100_A7P9F6 UniRef100_A7P9F6 UniRef100_A4QPI5 UniRef100_A4QPI5 UniRef100_B4VDS7 UniRef100_B4VDS7 UniRef100_C4RPE1 UniRef100_C4RPE1 UniRef100_UPI0001925155 UniRef100_UPI0001925155 UniRef100_B3M6C2 UniRef100_B3M6C2 UniRef100_Q090T6 UniRef100_Q090T6