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[1][TOP]
>UniRef100_A8J907 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J907_CHLRE
Length = 457
Score = 403 bits (1035), Expect = e-111
Identities = 185/185 (100%), Positives = 185/185 (100%)
Frame = +3
Query: 3 DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 182
DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL
Sbjct: 3 DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 62
Query: 183 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 362
GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR
Sbjct: 63 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 122
Query: 363 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 542
PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK
Sbjct: 123 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 182
Query: 543 WPGAR 557
WPGAR
Sbjct: 183 WPGAR 187
Score = 107 bits (266), Expect = 8e-22
Identities = 71/184 (38%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Frame = +3
Query: 36 GKPKK-KPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTG------- 191
G P++ P + K E W DG TEY++ Y EK +G PRA TG
Sbjct: 222 GPPERFHPQQQTEKPEGWFDGVPSTEYRRHYVEK------EGGPQPRAGATTGASGTALP 275
Query: 192 -GPFEGVSSYTATYK---GPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRV 359
GPF G S+Y Y+ P ERA KPA KE+ PF TTY + KE PY+RV
Sbjct: 276 KGPFAGTSTYATEYRPRTAPAYERA--GKPADDPKESGPFMGATTYGDSYVKKEAPYARV 333
Query: 360 RPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYR 539
+P H L + GPF DAT R + W + RA ++ G GPF+G S+YK D+
Sbjct: 334 KPTHALQASAGPFQDATEHRQCFQDWGTQPVARVGPNRAGNLATG-GPFDGASTYKTDFH 392
Query: 540 KWPG 551
K G
Sbjct: 393 KMAG 396
[2][TOP]
>UniRef100_A8J6L0 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J6L0_CHLRE
Length = 286
Score = 68.6 bits (166), Expect = 3e-10
Identities = 55/162 (33%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Frame = +3
Query: 60 CKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTGGPFEGVSSYTATYKGP 239
C+ +++ W +G+L TEY +EY K P R+ P L PF G ++ A Y
Sbjct: 48 CRAQRESKWLNGSLNTEYLREYPPKSVPLDRRRPGNP---LLDSAPFYGQTTNRADYTPK 104
Query: 240 QGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMR 419
QG RA + A + PF TTY ++ K+ R R A PFV ATT
Sbjct: 105 QG-RAQSARRAEGPLASLPFDGRTTYNDEYIKKQADLDR-RAKGPDASWSAPFVGATTYN 162
Query: 420 TDYPGWMGAKPSTPAHGR-AVSVPRGVGPFEGLSSYKDDYRK 542
T+Y +P T GR VSV P++G S Y+D+Y K
Sbjct: 163 TEYVP-RQVRPWTAEPGRPLVSV-----PWDGTSEYRDNYTK 198
[3][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus RepID=UPI000179CC90
Length = 2724
Score = 58.9 bits (141), Expect = 2e-07
Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Frame = +1
Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201
S+RRS + R ++ S S RRS R+ P T R+ PTR ++ P+
Sbjct: 1862 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1921
Query: 202 KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360
++ TPP TR R S R RS P RR SRS P TR RR R+R
Sbjct: 1922 RSRSRTPPVTRRRSRSRTSPIARRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1975
Query: 361 APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534
+P T RRR+ S TPP R +R +R+P R + R +A R S RTT
Sbjct: 1976 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 2027
[4][TOP]
>UniRef100_O62185 Protein F28D9.1, partially confirmed by transcript evidence n=1
Tax=Caenorhabditis elegans RepID=O62185_CAEEL
Length = 601
Score = 57.8 bits (138), Expect = 6e-07
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Frame = +1
Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*VAT 219
S +SP RRS Q++ +S +S P + R A S P AP +A +
Sbjct: 309 SASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS 368
Query: 220 P-PPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396
PP R RR +S PR+RR+ +R P + PP R R A + +RA
Sbjct: 369 KSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAK 428
Query: 397 SLT-PPPCVRTTRG-GWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTTTANGR 549
S + PP R R ++SP +R +P + A R R + +++ + R
Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRR 481
[5][TOP]
>UniRef100_UPI000057FEC5 PREDICTED: similar to T08G11.3 n=1 Tax=Bos taurus
RepID=UPI000057FEC5
Length = 394
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +3
Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440
KP+P E+ PFS T++++D+ ++ RP P + P D TT R D+ G +
Sbjct: 129 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 188
Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545
G AK PAH R PFEG + ++D ++ W
Sbjct: 189 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 221
[6][TOP]
>UniRef100_UPI000179D8AF UPI000179D8AF related cluster n=1 Tax=Bos taurus
RepID=UPI000179D8AF
Length = 451
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +3
Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440
KP+P E+ PFS T++++D+ ++ RP P + P D TT R D+ G +
Sbjct: 192 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 251
Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545
G AK PAH R PFEG + ++D ++ W
Sbjct: 252 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 284
[7][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 57.0 bits (136), Expect = 9e-07
Identities = 63/180 (35%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQT----ELSLQSTRRSIGRS-APPTSVR--------APPTRA 174
R+ R + RGG H ++ E S S+RR GRS PPTS + AP R+
Sbjct: 1815 RSRSRLTRRRRGGSGYHSRSPTRQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWNRS 1874
Query: 175 QT-SEPAAPLKA*VATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
++ + PA ++ TPP TR R RS P RR SRS P TR RR R+
Sbjct: 1875 RSRASPATHRRSRSRTPPVTR-----RRSRSRTSPVSRRRSRSRTSPVTR-----RRSRS 1924
Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRT 531
R +P RRR+ S TPP R +R +R+P +R V RSR P T
Sbjct: 1925 R-ASPV---NRRRSRSRTPPVTRRRSR---SRTPANRRRSRSRTPPVTRRRSRSRTPPVT 1977
Score = 54.7 bits (130), Expect = 5e-06
Identities = 65/181 (35%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPP----TSVRAPPT---RAQTSEPA 192
R+ R SP +R RRS +T S + RRS R++P + R PP R+++ PA
Sbjct: 1897 RSRSRTSPVSR--RRSRSRT--SPVTRRRSRSRASPVNRRRSRSRTPPVTRRRSRSRTPA 1952
Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
++ TPP TR R S R RS P RR SRS P TR RR R+
Sbjct: 1953 NRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 2007
Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPP----RQRMGAPCRFRVAWGRSRGSA 519
R +P T RRR+ S T P R +R +R+PP R R P R RSR +
Sbjct: 2008 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPVIRRRSRSRTPLLTR---KRSRTRS 2057
Query: 520 P 522
P
Sbjct: 2058 P 2058
Score = 53.9 bits (128), Expect = 8e-06
Identities = 59/188 (31%), Positives = 75/188 (39%), Gaps = 13/188 (6%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213
R + RSP RG RS + S + GRS ++ R +R+++
Sbjct: 529 RWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSR--SAARRGRSRSRS----------- 575
Query: 214 ATPPPTRGRRES------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTN 375
P TRGR S GR RS R+R SR+ +R P RR R+R P
Sbjct: 576 ---PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARR 632
Query: 376 WRRRRAP----SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRV---AWGRSRGSAPTRTT 534
R R+P S T P RGG +RS R G R R GRSR P R
Sbjct: 633 RSRTRSPVRRRSRTRSP---ARRGGRSRSRTPARRGGRSRSRTPARRGGRSRSRTPARRG 689
Query: 535 TANGRVPA 558
+ R PA
Sbjct: 690 RSRSRTPA 697
[8][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
RepID=UPI0000484FB6
Length = 2703
Score = 56.6 bits (135), Expect = 1e-06
Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Frame = +1
Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902
Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
P+ ++ TPP TR R S R RS P RR SRS P TR RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957
Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
R+R +P T RRR+ S TPP R +R P R R +P R RSR
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010
Query: 520 P 522
P
Sbjct: 2011 P 2011
[9][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Mus
musculus RepID=Q8BTI8-3
Length = 2603
Score = 56.6 bits (135), Expect = 1e-06
Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Frame = +1
Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902
Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
P+ ++ TPP TR R S R RS P RR SRS P TR RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957
Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
R+R +P T RRR+ S TPP R +R P R R +P R RSR
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010
Query: 520 P 522
P
Sbjct: 2011 P 2011
[10][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
RepID=SRRM2_MOUSE
Length = 2703
Score = 56.6 bits (135), Expect = 1e-06
Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Frame = +1
Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902
Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
P+ ++ TPP TR R S R RS P RR SRS P TR RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957
Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
R+R +P T RRR+ S TPP R +R P R R +P R RSR
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010
Query: 520 P 522
P
Sbjct: 2011 P 2011
[11][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 56.2 bits (134), Expect = 2e-06
Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Frame = +1
Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201
S+RRS + R ++ S S RRS R+ P T R+ PTR ++ P+
Sbjct: 1820 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1879
Query: 202 KA*VATPPPTRGRRESG-------RCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360
++ TPP TR RR R RS P RR SRS P TR RR R+R
Sbjct: 1880 RSRSRTPPVTR-RRSRSRTSITRRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1932
Query: 361 APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534
+P T RRR+ S TPP R +R +R+P R + R +A R S RTT
Sbjct: 1933 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 1984
[12][TOP]
>UniRef100_O60382 KIAA0324 (Fragment) n=1 Tax=Homo sapiens RepID=O60382_HUMAN
Length = 1791
Score = 56.2 bits (134), Expect = 2e-06
Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P
Sbjct: 919 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 973
Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336
++ TPP TR R S R RS P RR SRS P TR T P
Sbjct: 974 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 1033
Query: 337 RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513
R R+R + T+ RRR+ S TPP R +R P R R +P R RSR
Sbjct: 1034 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 1088
Query: 514 SAPTRTTTANGR 549
P TA G+
Sbjct: 1089 RTP---RTARGK 1097
[13][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo
sapiens RepID=Q9UQ35-2
Length = 2334
Score = 56.2 bits (134), Expect = 2e-06
Identities = 66/199 (33%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P
Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941
Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
++ TPP TR R S R RS P RR SRS P TR RR R+
Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 1996
Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQ---RMGAPCRFR----------- 489
R +P T RRR+ S T P R +R +R+PP Q R P F
Sbjct: 1997 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPAQDQPRSPVPSAFSDQSRCLIAQTT 2049
Query: 490 -VAWGRSRGSAPTRTTTAN 543
VA +S S TTT++
Sbjct: 2050 PVAGSQSLSSGAVATTTSS 2068
[14][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 56.2 bits (134), Expect = 2e-06
Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P
Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941
Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336
++ TPP TR R S R RS P RR SRS P TR T P
Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 2001
Query: 337 RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513
R R+R + T+ RRR+ S TPP R +R P R R +P R RSR
Sbjct: 2002 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 2056
Query: 514 SAPTRTTTANGR 549
P TA G+
Sbjct: 2057 RTP---RTARGK 2065
[15][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 55.8 bits (133), Expect = 2e-06
Identities = 54/173 (31%), Positives = 69/173 (39%), Gaps = 8/173 (4%)
Frame = +1
Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213
+ R P R R S T + S R S+P T R PP R ++ V
Sbjct: 1638 KTKSRTPPRRRSSRSSPELTRKARVSRRSRSASSSPETRSRTPPRRRRSPS--------V 1689
Query: 214 ATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPR---RCRTRVCAPTTNWRR 384
++P PT R S R RS PR + TSR R P + PR R R+R T R
Sbjct: 1690 SSPEPTEKSRSSRRRRSVSSPRNKTTSRRGRSPSPK----PRGLQRSRSRSRREKTRTTR 1745
Query: 385 RRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGS-----APTR 528
RR R G ++S R+R + R RV R GS +PTR
Sbjct: 1746 RR------------DRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPTR 1786
[16][TOP]
>UniRef100_UPI000179EADD hypothetical protein LOC539526 n=1 Tax=Bos taurus
RepID=UPI000179EADD
Length = 474
Score = 55.5 bits (132), Expect = 3e-06
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P
Sbjct: 233 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 292
Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W
Sbjct: 293 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 347
Query: 546 PGAR 557
R
Sbjct: 348 ASTR 351
[17][TOP]
>UniRef100_UPI000179EADC Notchless homolog 1. n=1 Tax=Bos taurus RepID=UPI000179EADC
Length = 477
Score = 55.5 bits (132), Expect = 3e-06
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P
Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295
Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W
Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350
Query: 546 PGAR 557
R
Sbjct: 351 ASTR 354
[18][TOP]
>UniRef100_Q32KR7 Hypothetical LOC539526 n=1 Tax=Bos taurus RepID=Q32KR7_BOVIN
Length = 477
Score = 55.5 bits (132), Expect = 3e-06
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P
Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295
Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W
Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350
Query: 546 PGAR 557
R
Sbjct: 351 ASTR 354
[19][TOP]
>UniRef100_UPI000180CD30 PREDICTED: similar to CDKN1A interacting zinc finger protein 1 n=1
Tax=Ciona intestinalis RepID=UPI000180CD30
Length = 753
Score = 55.5 bits (132), Expect = 3e-06
Identities = 54/164 (32%), Positives = 68/164 (41%), Gaps = 4/164 (2%)
Frame = +1
Query: 49 RSPAARGGRRSHGQTELSLQSTRRSIG-RSAPPTSVRAPPTRAQTSEPAAPLKA*VATPP 225
RSP RSH +RS R+ T+ R P R + PA+P + PP
Sbjct: 102 RSPPRNIPPRSHSPNRAPSPDHKRSNSPRNDRSTNQRVPSPRQE--RPASPRERMPPRPP 159
Query: 226 -PTRGRRESGRCRSNQHPRKRR--TSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396
P R R S R PR+ R + R R P R PP R R +P +WRRR
Sbjct: 160 SPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPRSPP-DWRRR--- 215
Query: 397 SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTR 528
+P P R W RSPP +P R+ G RG +P R
Sbjct: 216 --SPGPYYRGPPSDWRRSPPHWARRSPPRY----GPPRGRSPPR 253
[20][TOP]
>UniRef100_A8JAN6 Flagellar associated protein (Fragment) n=1 Tax=Chlamydomonas
reinhardtii RepID=A8JAN6_CHLRE
Length = 173
Score = 55.1 bits (131), Expect = 4e-06
Identities = 43/138 (31%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 129 EKRAPYQ-RQGATYPRANLGTGGPFEGVSSYTATYKGPQGERALPFKPAPTEK-ENQPFS 302
+ RA YQ R+ + + N G F G SSY + G E PF P F
Sbjct: 9 DARAHYQGREIQLHGQPNAG----FAGQSSYKQDFPGHIPEPRQPFAPNQQYAGSGAAFD 64
Query: 303 PWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVS 482
++YK DFPA + P Q P PF + R +Y G H +
Sbjct: 65 GHSSYKQDFPAHPIEPRPPAPGGQYQPNTAPFDGTSAYRDNYRGHNIDPSQYARHTGRPT 124
Query: 483 VPRGVGPFEGLSSYKDDY 536
P PF+G SSYK DY
Sbjct: 125 GPLSTAPFDGASSYKQDY 142
[21][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 54.7 bits (130), Expect = 5e-06
Identities = 60/198 (30%), Positives = 83/198 (41%), Gaps = 28/198 (14%)
Frame = +1
Query: 49 RSPAARGGRRSHGQTELSLQSTRRSIGRSAP-PTSVRAPPTRAQTSEPAAPLKA*VATPP 225
++PA R ++ ++ R S S+P P S +AP R +S P +P K PP
Sbjct: 272 KAPAEPSPPRGRSPSKSPEKAPRSSSSESSPAPQSTKAP--RRASSSPDSPPK---PAPP 326
Query: 226 P----------------TRGRRESGRCRSNQHPRKRRTSRS---ARGPPTRWTFPPRRCR 348
P +RGR + + RS R+ SRS R +R P R+ R
Sbjct: 327 PVTRREISPSPTTKSSRSRGRAKRDKSRSRSPSRRVGRSRSPATTRRGRSRSRTPARKGR 386
Query: 349 TRVCAPTTNWRRRRAP-----SLTPPPCVRT---TRGGWARSPPRQRMGAPCRFRVAWGR 504
+R + T WRR R+P S +P R+ R GW+RS QR G R GR
Sbjct: 387 SR--SRTPQWRRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGR-SRSTARRGR 443
Query: 505 SRGSAPTRTTTANGRVPA 558
SR P + R PA
Sbjct: 444 SRSKTPATRGRSRSRTPA 461
[22][TOP]
>UniRef100_UPI00015C36A1 pre-mRNA splicing factor cwc22 n=1 Tax=Neurospora crassa OR74A
RepID=UPI00015C36A1
Length = 795
Score = 54.3 bits (129), Expect = 6e-06
Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Frame = +1
Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207
S R+P RG RS+ +T +S RS RS + R+PP R ++ P+ P +
Sbjct: 533 SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 592
Query: 208 -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
+P +R R S R RS R R SRS PP R P R R
Sbjct: 593 RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 650
Query: 352 RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501
V A + +RRR S + PPP R RG ++RS R R P R G
Sbjct: 651 PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 708
Query: 502 RSRGSA 519
R G A
Sbjct: 709 RDTGRA 714
[23][TOP]
>UniRef100_Q7RX84 Pre-mRNA-splicing factor cwc-22 n=1 Tax=Neurospora crassa
RepID=CWC22_NEUCR
Length = 1010
Score = 54.3 bits (129), Expect = 6e-06
Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Frame = +1
Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207
S R+P RG RS+ +T +S RS RS + R+PP R ++ P+ P +
Sbjct: 748 SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 807
Query: 208 -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
+P +R R S R RS R R SRS PP R P R R
Sbjct: 808 RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 865
Query: 352 RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501
V A + +RRR S + PPP R RG ++RS R R P R G
Sbjct: 866 PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 923
Query: 502 RSRGSA 519
R G A
Sbjct: 924 RDTGRA 929
[24][TOP]
>UniRef100_C9SVF0 Pre-mRNA-splicing factor cwc22 n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9SVF0_9PEZI
Length = 845
Score = 53.9 bits (128), Expect = 8e-06
Identities = 60/204 (29%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Frame = +1
Query: 40 SQRRSPAARGGR-RSHGQTELSLQS-------------TRRSIGRSAPPTSVRAPPTRAQ 177
S+ RSP +R GR RSH + S +S RR S P+ R +
Sbjct: 512 SRSRSPESRSGRKRSHSRGNSSSRSRSYTRSPSPPGRRARRDDSYSRSPSPKRGRRQSSY 571
Query: 178 TSEPAAPLK------A*VATPPPTRGRRESGRCRSNQHPRKRRT------------SRSA 303
+ P+ P + + +PPP R RR S ++ P +R SR A
Sbjct: 572 SRSPSPPARNAPRDRSLTRSPPPARRRRNSSSVSRSRSPAPKRAAAREPARSLSPYSRRA 631
Query: 304 RGPPTRWTFPPRRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRG--GWARSPPRQRMGAP 477
G R PP R R P RR PS + P R G G ARSPP R+ AP
Sbjct: 632 AGLAARPRSPPAREPARREPP------RREPSRSLSPYSRRAAGLVGRARSPPPARVPAP 685
Query: 478 CRFRVAWGRSRGSAPTRTTTANGR 549
R + GSAP + + R
Sbjct: 686 PPGRRRESSAGGSAPRKKPRYDSR 709