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[1][TOP] >UniRef100_A8J907 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J907_CHLRE Length = 457 Score = 403 bits (1035), Expect = e-111 Identities = 185/185 (100%), Positives = 185/185 (100%) Frame = +3 Query: 3 DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 182 DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL Sbjct: 3 DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 62 Query: 183 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 362 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR Sbjct: 63 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 122 Query: 363 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 542 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK Sbjct: 123 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 182 Query: 543 WPGAR 557 WPGAR Sbjct: 183 WPGAR 187 Score = 107 bits (266), Expect = 8e-22 Identities = 71/184 (38%), Positives = 91/184 (49%), Gaps = 12/184 (6%) Frame = +3 Query: 36 GKPKK-KPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTG------- 191 G P++ P + K E W DG TEY++ Y EK +G PRA TG Sbjct: 222 GPPERFHPQQQTEKPEGWFDGVPSTEYRRHYVEK------EGGPQPRAGATTGASGTALP 275 Query: 192 -GPFEGVSSYTATYK---GPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRV 359 GPF G S+Y Y+ P ERA KPA KE+ PF TTY + KE PY+RV Sbjct: 276 KGPFAGTSTYATEYRPRTAPAYERA--GKPADDPKESGPFMGATTYGDSYVKKEAPYARV 333 Query: 360 RPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYR 539 +P H L + GPF DAT R + W + RA ++ G GPF+G S+YK D+ Sbjct: 334 KPTHALQASAGPFQDATEHRQCFQDWGTQPVARVGPNRAGNLATG-GPFDGASTYKTDFH 392 Query: 540 KWPG 551 K G Sbjct: 393 KMAG 396 [2][TOP] >UniRef100_A8J6L0 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6L0_CHLRE Length = 286 Score = 68.6 bits (166), Expect = 3e-10 Identities = 55/162 (33%), Positives = 76/162 (46%), Gaps = 1/162 (0%) Frame = +3 Query: 60 CKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTGGPFEGVSSYTATYKGP 239 C+ +++ W +G+L TEY +EY K P R+ P L PF G ++ A Y Sbjct: 48 CRAQRESKWLNGSLNTEYLREYPPKSVPLDRRRPGNP---LLDSAPFYGQTTNRADYTPK 104 Query: 240 QGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMR 419 QG RA + A + PF TTY ++ K+ R R A PFV ATT Sbjct: 105 QG-RAQSARRAEGPLASLPFDGRTTYNDEYIKKQADLDR-RAKGPDASWSAPFVGATTYN 162 Query: 420 TDYPGWMGAKPSTPAHGR-AVSVPRGVGPFEGLSSYKDDYRK 542 T+Y +P T GR VSV P++G S Y+D+Y K Sbjct: 163 TEYVP-RQVRPWTAEPGRPLVSV-----PWDGTSEYRDNYTK 198 [3][TOP] >UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus RepID=UPI000179CC90 Length = 2724 Score = 58.9 bits (141), Expect = 2e-07 Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%) Frame = +1 Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201 S+RRS + R ++ S S RRS R+ P T R+ PTR ++ P+ Sbjct: 1862 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1921 Query: 202 KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360 ++ TPP TR R S R RS P RR SRS P TR RR R+R Sbjct: 1922 RSRSRTPPVTRRRSRSRTSPIARRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1975 Query: 361 APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534 +P T RRR+ S TPP R +R +R+P R + R +A R S RTT Sbjct: 1976 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 2027 [4][TOP] >UniRef100_O62185 Protein F28D9.1, partially confirmed by transcript evidence n=1 Tax=Caenorhabditis elegans RepID=O62185_CAEEL Length = 601 Score = 57.8 bits (138), Expect = 6e-07 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 3/173 (1%) Frame = +1 Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*VAT 219 S +SP RRS Q++ +S +S P + R A S P AP +A + Sbjct: 309 SASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS 368 Query: 220 P-PPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396 PP R RR +S PR+RR+ +R P + PP R R A + +RA Sbjct: 369 KSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAK 428 Query: 397 SLT-PPPCVRTTRG-GWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTTTANGR 549 S + PP R R ++SP +R +P + A R R + +++ + R Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRR 481 [5][TOP] >UniRef100_UPI000057FEC5 PREDICTED: similar to T08G11.3 n=1 Tax=Bos taurus RepID=UPI000057FEC5 Length = 394 Score = 57.0 bits (136), Expect = 9e-07 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Frame = +3 Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440 KP+P E+ PFS T++++D+ ++ RP P + P D TT R D+ G + Sbjct: 129 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 188 Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545 G AK PAH R PFEG + ++D ++ W Sbjct: 189 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 221 [6][TOP] >UniRef100_UPI000179D8AF UPI000179D8AF related cluster n=1 Tax=Bos taurus RepID=UPI000179D8AF Length = 451 Score = 57.0 bits (136), Expect = 9e-07 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Frame = +3 Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440 KP+P E+ PFS T++++D+ ++ RP P + P D TT R D+ G + Sbjct: 192 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 251 Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545 G AK PAH R PFEG + ++D ++ W Sbjct: 252 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 284 [7][TOP] >UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1 Tax=Monodelphis domestica RepID=UPI0000F2DB84 Length = 2785 Score = 57.0 bits (136), Expect = 9e-07 Identities = 63/180 (35%), Positives = 82/180 (45%), Gaps = 14/180 (7%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQT----ELSLQSTRRSIGRS-APPTSVR--------APPTRA 174 R+ R + RGG H ++ E S S+RR GRS PPTS + AP R+ Sbjct: 1815 RSRSRLTRRRRGGSGYHSRSPTRQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWNRS 1874 Query: 175 QT-SEPAAPLKA*VATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351 ++ + PA ++ TPP TR R RS P RR SRS P TR RR R+ Sbjct: 1875 RSRASPATHRRSRSRTPPVTR-----RRSRSRTSPVSRRRSRSRTSPVTR-----RRSRS 1924 Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRT 531 R +P RRR+ S TPP R +R +R+P +R V RSR P T Sbjct: 1925 R-ASPV---NRRRSRSRTPPVTRRRSR---SRTPANRRRSRSRTPPVTRRRSRSRTPPVT 1977 Score = 54.7 bits (130), Expect = 5e-06 Identities = 65/181 (35%), Positives = 84/181 (46%), Gaps = 18/181 (9%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPP----TSVRAPPT---RAQTSEPA 192 R+ R SP +R RRS +T S + RRS R++P + R PP R+++ PA Sbjct: 1897 RSRSRTSPVSR--RRSRSRT--SPVTRRRSRSRASPVNRRRSRSRTPPVTRRRSRSRTPA 1952 Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351 ++ TPP TR R S R RS P RR SRS P TR RR R+ Sbjct: 1953 NRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 2007 Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPP----RQRMGAPCRFRVAWGRSRGSA 519 R +P T RRR+ S T P R +R +R+PP R R P R RSR + Sbjct: 2008 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPVIRRRSRSRTPLLTR---KRSRTRS 2057 Query: 520 P 522 P Sbjct: 2058 P 2058 Score = 53.9 bits (128), Expect = 8e-06 Identities = 59/188 (31%), Positives = 75/188 (39%), Gaps = 13/188 (6%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213 R + RSP RG RS + S + GRS ++ R +R+++ Sbjct: 529 RWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSR--SAARRGRSRSRS----------- 575 Query: 214 ATPPPTRGRRES------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTN 375 P TRGR S GR RS R+R SR+ +R P RR R+R P Sbjct: 576 ---PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARR 632 Query: 376 WRRRRAP----SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRV---AWGRSRGSAPTRTT 534 R R+P S T P RGG +RS R G R R GRSR P R Sbjct: 633 RSRTRSPVRRRSRTRSP---ARRGGRSRSRTPARRGGRSRSRTPARRGGRSRSRTPARRG 689 Query: 535 TANGRVPA 558 + R PA Sbjct: 690 RSRSRTPA 697 [8][TOP] >UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus RepID=UPI0000484FB6 Length = 2703 Score = 56.6 bits (135), Expect = 1e-06 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Frame = +1 Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192 R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++ Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902 Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342 P+ ++ TPP TR R S R RS P RR SRS P TR RR Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957 Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519 R+R +P T RRR+ S TPP R +R P R R +P R RSR Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010 Query: 520 P 522 P Sbjct: 2011 P 2011 [9][TOP] >UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Mus musculus RepID=Q8BTI8-3 Length = 2603 Score = 56.6 bits (135), Expect = 1e-06 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Frame = +1 Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192 R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++ Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902 Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342 P+ ++ TPP TR R S R RS P RR SRS P TR RR Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957 Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519 R+R +P T RRR+ S TPP R +R P R R +P R RSR Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010 Query: 520 P 522 P Sbjct: 2011 P 2011 [10][TOP] >UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus RepID=SRRM2_MOUSE Length = 2703 Score = 56.6 bits (135), Expect = 1e-06 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Frame = +1 Query: 34 RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192 R+ R SP +R RS ++ S S RRS R+ P T R+ PTR ++ Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902 Query: 193 APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342 P+ ++ TPP TR R S R RS P RR SRS P TR RR Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957 Query: 343 CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519 R+R +P T RRR+ S TPP R +R P R R +P R RSR Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010 Query: 520 P 522 P Sbjct: 2011 P 2011 [11][TOP] >UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa) (Ser/Arg- related nuclear matrix protein) (SR-related nuclear matrix protein of 300 kDa) (Splicing coactivator subunit SRm300) (30 n=1 Tax=Canis lupus familiaris RepID=UPI000184A2B2 Length = 2682 Score = 56.2 bits (134), Expect = 2e-06 Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%) Frame = +1 Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201 S+RRS + R ++ S S RRS R+ P T R+ PTR ++ P+ Sbjct: 1820 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1879 Query: 202 KA*VATPPPTRGRRESG-------RCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360 ++ TPP TR RR R RS P RR SRS P TR RR R+R Sbjct: 1880 RSRSRTPPVTR-RRSRSRTSITRRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1932 Query: 361 APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534 +P T RRR+ S TPP R +R +R+P R + R +A R S RTT Sbjct: 1933 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 1984 [12][TOP] >UniRef100_O60382 KIAA0324 (Fragment) n=1 Tax=Homo sapiens RepID=O60382_HUMAN Length = 1791 Score = 56.2 bits (134), Expect = 2e-06 Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192 R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P Sbjct: 919 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 973 Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336 ++ TPP TR R S R RS P RR SRS P TR T P Sbjct: 974 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 1033 Query: 337 RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513 R R+R + T+ RRR+ S TPP R +R P R R +P R RSR Sbjct: 1034 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 1088 Query: 514 SAPTRTTTANGR 549 P TA G+ Sbjct: 1089 RTP---RTARGK 1097 [13][TOP] >UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=Q9UQ35-2 Length = 2334 Score = 56.2 bits (134), Expect = 2e-06 Identities = 66/199 (33%), Positives = 89/199 (44%), Gaps = 29/199 (14%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192 R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941 Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351 ++ TPP TR R S R RS P RR SRS P TR RR R+ Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 1996 Query: 352 RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQ---RMGAPCRFR----------- 489 R +P T RRR+ S T P R +R +R+PP Q R P F Sbjct: 1997 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPAQDQPRSPVPSAFSDQSRCLIAQTT 2049 Query: 490 -VAWGRSRGSAPTRTTTAN 543 VA +S S TTT++ Sbjct: 2050 PVAGSQSLSSGAVATTTSS 2068 [14][TOP] >UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=SRRM2_HUMAN Length = 2752 Score = 56.2 bits (134), Expect = 2e-06 Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192 R+ R SP +R RRS +T ++ RRS R++P + R+ PP R+++ P Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941 Query: 193 APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336 ++ TPP TR R S R RS P RR SRS P TR T P Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 2001 Query: 337 RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513 R R+R + T+ RRR+ S TPP R +R P R R +P R RSR Sbjct: 2002 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 2056 Query: 514 SAPTRTTTANGR 549 P TA G+ Sbjct: 2057 RTP---RTARGK 2065 [15][TOP] >UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1 Tax=Rattus norvegicus RepID=UPI0000DA333B Length = 2707 Score = 55.8 bits (133), Expect = 2e-06 Identities = 54/173 (31%), Positives = 69/173 (39%), Gaps = 8/173 (4%) Frame = +1 Query: 34 RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213 + R P R R S T + S R S+P T R PP R ++ V Sbjct: 1638 KTKSRTPPRRRSSRSSPELTRKARVSRRSRSASSSPETRSRTPPRRRRSPS--------V 1689 Query: 214 ATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPR---RCRTRVCAPTTNWRR 384 ++P PT R S R RS PR + TSR R P + PR R R+R T R Sbjct: 1690 SSPEPTEKSRSSRRRRSVSSPRNKTTSRRGRSPSPK----PRGLQRSRSRSRREKTRTTR 1745 Query: 385 RRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGS-----APTR 528 RR R G ++S R+R + R RV R GS +PTR Sbjct: 1746 RR------------DRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPTR 1786 [16][TOP] >UniRef100_UPI000179EADD hypothetical protein LOC539526 n=1 Tax=Bos taurus RepID=UPI000179EADD Length = 474 Score = 55.5 bits (132), Expect = 3e-06 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Frame = +3 Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371 PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P Sbjct: 233 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 292 Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545 P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W Sbjct: 293 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 347 Query: 546 PGAR 557 R Sbjct: 348 ASTR 351 [17][TOP] >UniRef100_UPI000179EADC Notchless homolog 1. n=1 Tax=Bos taurus RepID=UPI000179EADC Length = 477 Score = 55.5 bits (132), Expect = 3e-06 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Frame = +3 Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371 PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295 Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545 P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350 Query: 546 PGAR 557 R Sbjct: 351 ASTR 354 [18][TOP] >UniRef100_Q32KR7 Hypothetical LOC539526 n=1 Tax=Bos taurus RepID=Q32KR7_BOVIN Length = 477 Score = 55.5 bits (132), Expect = 3e-06 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Frame = +3 Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371 PFE ++++ +Y+G GE A KP A + PFS T ++ + A P +P Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295 Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545 P E TT++T Y GA PA A+SV +G G FEG ++ K+DY++W Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350 Query: 546 PGAR 557 R Sbjct: 351 ASTR 354 [19][TOP] >UniRef100_UPI000180CD30 PREDICTED: similar to CDKN1A interacting zinc finger protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180CD30 Length = 753 Score = 55.5 bits (132), Expect = 3e-06 Identities = 54/164 (32%), Positives = 68/164 (41%), Gaps = 4/164 (2%) Frame = +1 Query: 49 RSPAARGGRRSHGQTELSLQSTRRSIG-RSAPPTSVRAPPTRAQTSEPAAPLKA*VATPP 225 RSP RSH +RS R+ T+ R P R + PA+P + PP Sbjct: 102 RSPPRNIPPRSHSPNRAPSPDHKRSNSPRNDRSTNQRVPSPRQE--RPASPRERMPPRPP 159 Query: 226 -PTRGRRESGRCRSNQHPRKRR--TSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396 P R R S R PR+ R + R R P R PP R R +P +WRRR Sbjct: 160 SPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPRSPP-DWRRR--- 215 Query: 397 SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTR 528 +P P R W RSPP +P R+ G RG +P R Sbjct: 216 --SPGPYYRGPPSDWRRSPPHWARRSPPRY----GPPRGRSPPR 253 [20][TOP] >UniRef100_A8JAN6 Flagellar associated protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JAN6_CHLRE Length = 173 Score = 55.1 bits (131), Expect = 4e-06 Identities = 43/138 (31%), Positives = 55/138 (39%), Gaps = 2/138 (1%) Frame = +3 Query: 129 EKRAPYQ-RQGATYPRANLGTGGPFEGVSSYTATYKGPQGERALPFKPAPTEK-ENQPFS 302 + RA YQ R+ + + N G F G SSY + G E PF P F Sbjct: 9 DARAHYQGREIQLHGQPNAG----FAGQSSYKQDFPGHIPEPRQPFAPNQQYAGSGAAFD 64 Query: 303 PWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVS 482 ++YK DFPA + P Q P PF + R +Y G H + Sbjct: 65 GHSSYKQDFPAHPIEPRPPAPGGQYQPNTAPFDGTSAYRDNYRGHNIDPSQYARHTGRPT 124 Query: 483 VPRGVGPFEGLSSYKDDY 536 P PF+G SSYK DY Sbjct: 125 GPLSTAPFDGASSYKQDY 142 [21][TOP] >UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9 Length = 2677 Score = 54.7 bits (130), Expect = 5e-06 Identities = 60/198 (30%), Positives = 83/198 (41%), Gaps = 28/198 (14%) Frame = +1 Query: 49 RSPAARGGRRSHGQTELSLQSTRRSIGRSAP-PTSVRAPPTRAQTSEPAAPLKA*VATPP 225 ++PA R ++ ++ R S S+P P S +AP R +S P +P K PP Sbjct: 272 KAPAEPSPPRGRSPSKSPEKAPRSSSSESSPAPQSTKAP--RRASSSPDSPPK---PAPP 326 Query: 226 P----------------TRGRRESGRCRSNQHPRKRRTSRS---ARGPPTRWTFPPRRCR 348 P +RGR + + RS R+ SRS R +R P R+ R Sbjct: 327 PVTRREISPSPTTKSSRSRGRAKRDKSRSRSPSRRVGRSRSPATTRRGRSRSRTPARKGR 386 Query: 349 TRVCAPTTNWRRRRAP-----SLTPPPCVRT---TRGGWARSPPRQRMGAPCRFRVAWGR 504 +R + T WRR R+P S +P R+ R GW+RS QR G R GR Sbjct: 387 SR--SRTPQWRRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGR-SRSTARRGR 443 Query: 505 SRGSAPTRTTTANGRVPA 558 SR P + R PA Sbjct: 444 SRSKTPATRGRSRSRTPA 461 [22][TOP] >UniRef100_UPI00015C36A1 pre-mRNA splicing factor cwc22 n=1 Tax=Neurospora crassa OR74A RepID=UPI00015C36A1 Length = 795 Score = 54.3 bits (129), Expect = 6e-06 Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%) Frame = +1 Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207 S R+P RG RS+ +T +S RS RS + R+PP R ++ P+ P + Sbjct: 533 SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 592 Query: 208 -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351 +P +R R S R RS R R SRS PP R P R R Sbjct: 593 RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 650 Query: 352 RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501 V A + +RRR S + PPP R RG ++RS R R P R G Sbjct: 651 PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 708 Query: 502 RSRGSA 519 R G A Sbjct: 709 RDTGRA 714 [23][TOP] >UniRef100_Q7RX84 Pre-mRNA-splicing factor cwc-22 n=1 Tax=Neurospora crassa RepID=CWC22_NEUCR Length = 1010 Score = 54.3 bits (129), Expect = 6e-06 Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%) Frame = +1 Query: 40 SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207 S R+P RG RS+ +T +S RS RS + R+PP R ++ P+ P + Sbjct: 748 SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 807 Query: 208 -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351 +P +R R S R RS R R SRS PP R P R R Sbjct: 808 RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 865 Query: 352 RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501 V A + +RRR S + PPP R RG ++RS R R P R G Sbjct: 866 PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 923 Query: 502 RSRGSA 519 R G A Sbjct: 924 RDTGRA 929 [24][TOP] >UniRef100_C9SVF0 Pre-mRNA-splicing factor cwc22 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SVF0_9PEZI Length = 845 Score = 53.9 bits (128), Expect = 8e-06 Identities = 60/204 (29%), Positives = 79/204 (38%), Gaps = 34/204 (16%) Frame = +1 Query: 40 SQRRSPAARGGR-RSHGQTELSLQS-------------TRRSIGRSAPPTSVRAPPTRAQ 177 S+ RSP +R GR RSH + S +S RR S P+ R + Sbjct: 512 SRSRSPESRSGRKRSHSRGNSSSRSRSYTRSPSPPGRRARRDDSYSRSPSPKRGRRQSSY 571 Query: 178 TSEPAAPLK------A*VATPPPTRGRRESGRCRSNQHPRKRRT------------SRSA 303 + P+ P + + +PPP R RR S ++ P +R SR A Sbjct: 572 SRSPSPPARNAPRDRSLTRSPPPARRRRNSSSVSRSRSPAPKRAAAREPARSLSPYSRRA 631 Query: 304 RGPPTRWTFPPRRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRG--GWARSPPRQRMGAP 477 G R PP R R P RR PS + P R G G ARSPP R+ AP Sbjct: 632 AGLAARPRSPPAREPARREPP------RREPSRSLSPYSRRAAGLVGRARSPPPARVPAP 685 Query: 478 CRFRVAWGRSRGSAPTRTTTANGR 549 R + GSAP + + R Sbjct: 686 PPGRRRESSAGGSAPRKKPRYDSR 709