AV389152 ( CM040c01_r )

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[1][TOP]
>UniRef100_A8J907 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8J907_CHLRE
          Length = 457

 Score =  403 bits (1035), Expect = e-111
 Identities = 185/185 (100%), Positives = 185/185 (100%)
 Frame = +3

Query: 3   DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 182
           DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL
Sbjct: 3   DTQPVLGMMTTGKPKKKPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANL 62

Query: 183 GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 362
           GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR
Sbjct: 63  GTGGPFEGVSSYTATYKGPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVR 122

Query: 363 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 542
           PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK
Sbjct: 123 PNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRK 182

Query: 543 WPGAR 557
           WPGAR
Sbjct: 183 WPGAR 187

 Score =  107 bits (266), Expect = 8e-22
 Identities = 71/184 (38%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
 Frame = +3

Query: 36  GKPKK-KPCCKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTG------- 191
           G P++  P  +  K E W DG   TEY++ Y EK      +G   PRA   TG       
Sbjct: 222 GPPERFHPQQQTEKPEGWFDGVPSTEYRRHYVEK------EGGPQPRAGATTGASGTALP 275

Query: 192 -GPFEGVSSYTATYK---GPQGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRV 359
            GPF G S+Y   Y+    P  ERA   KPA   KE+ PF   TTY   +  KE PY+RV
Sbjct: 276 KGPFAGTSTYATEYRPRTAPAYERA--GKPADDPKESGPFMGATTYGDSYVKKEAPYARV 333

Query: 360 RPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYR 539
           +P H L  + GPF DAT  R  +  W     +     RA ++  G GPF+G S+YK D+ 
Sbjct: 334 KPTHALQASAGPFQDATEHRQCFQDWGTQPVARVGPNRAGNLATG-GPFDGASTYKTDFH 392

Query: 540 KWPG 551
           K  G
Sbjct: 393 KMAG 396

[2][TOP]
>UniRef100_A8J6L0 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8J6L0_CHLRE
          Length = 286

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 55/162 (33%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
 Frame = +3

Query: 60  CKGRKKEPWTDGALLTEYQKEYWEKRAPYQRQGATYPRANLGTGGPFEGVSSYTATYKGP 239
           C+ +++  W +G+L TEY +EY  K  P  R+    P   L    PF G ++  A Y   
Sbjct: 48  CRAQRESKWLNGSLNTEYLREYPPKSVPLDRRRPGNP---LLDSAPFYGQTTNRADYTPK 104

Query: 240 QGERALPFKPAPTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMR 419
           QG RA   + A     + PF   TTY  ++  K+    R R     A    PFV ATT  
Sbjct: 105 QG-RAQSARRAEGPLASLPFDGRTTYNDEYIKKQADLDR-RAKGPDASWSAPFVGATTYN 162

Query: 420 TDYPGWMGAKPSTPAHGR-AVSVPRGVGPFEGLSSYKDDYRK 542
           T+Y      +P T   GR  VSV     P++G S Y+D+Y K
Sbjct: 163 TEYVP-RQVRPWTAEPGRPLVSV-----PWDGTSEYRDNYTK 198

[3][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus RepID=UPI000179CC90
          Length = 2724

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
 Frame = +1

Query: 40   SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201
            S+RRS +     R   ++  S  S RRS  R+ P T  R+    PTR ++     P+   
Sbjct: 1862 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1921

Query: 202  KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360
            ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR R+R  
Sbjct: 1922 RSRSRTPPVTRRRSRSRTSPIARRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1975

Query: 361  APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534
            +P T   RRR+ S TPP   R +R   +R+P   R  +  R  +A  R   S   RTT
Sbjct: 1976 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 2027

[4][TOP]
>UniRef100_O62185 Protein F28D9.1, partially confirmed by transcript evidence n=1
           Tax=Caenorhabditis elegans RepID=O62185_CAEEL
          Length = 601

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
 Frame = +1

Query: 40  SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*VAT 219
           S  +SP     RRS  Q++       +S  +S P  + R     A  S P AP +A   +
Sbjct: 309 SASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS 368

Query: 220 P-PPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396
             PP R RR     +S   PR+RR+   +R P  +   PP R R    A  +    +RA 
Sbjct: 369 KSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAK 428

Query: 397 SLT-PPPCVRTTRG-GWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTTTANGR 549
           S +  PP  R  R    ++SP  +R  +P +   A  R R  + +++ +   R
Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRR 481

[5][TOP]
>UniRef100_UPI000057FEC5 PREDICTED: similar to T08G11.3 n=1 Tax=Bos taurus
           RepID=UPI000057FEC5
          Length = 394

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
 Frame = +3

Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440
           KP+P  E+   PFS  T++++D+      ++  RP     P + P  D TT R D+ G +
Sbjct: 129 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 188

Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545
           G  AK   PAH R         PFEG + ++D ++ W
Sbjct: 189 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 221

[6][TOP]
>UniRef100_UPI000179D8AF UPI000179D8AF related cluster n=1 Tax=Bos taurus
           RepID=UPI000179D8AF
          Length = 451

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
 Frame = +3

Query: 264 KPAPT-EKENQPFSPWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWM 440
           KP+P  E+   PFS  T++++D+      ++  RP     P + P  D TT R D+ G +
Sbjct: 192 KPSPAVERSTIPFSCNTSHRLDYVPHRPEFNLARPKDSYKPPDQPLEDLTTHRCDFQGLV 251

Query: 441 G--AKPSTPAHGRAVSVPRGVGPFEGLSSYKDDYRKW 545
           G  AK   PAH R         PFEG + ++D ++ W
Sbjct: 252 GETAKICRPAHTRVAQ----DAPFEGSTEFRDSFQAW 284

[7][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
            Tax=Monodelphis domestica RepID=UPI0000F2DB84
          Length = 2785

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 63/180 (35%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQT----ELSLQSTRRSIGRS-APPTSVR--------APPTRA 174
            R+  R +   RGG   H ++    E S  S+RR  GRS  PPTS +        AP  R+
Sbjct: 1815 RSRSRLTRRRRGGSGYHSRSPTRQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWNRS 1874

Query: 175  QT-SEPAAPLKA*VATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
            ++ + PA   ++   TPP TR      R RS   P  RR SRS   P TR     RR R+
Sbjct: 1875 RSRASPATHRRSRSRTPPVTR-----RRSRSRTSPVSRRRSRSRTSPVTR-----RRSRS 1924

Query: 352  RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRT 531
            R  +P     RRR+ S TPP   R +R   +R+P  +R        V   RSR   P  T
Sbjct: 1925 R-ASPV---NRRRSRSRTPPVTRRRSR---SRTPANRRRSRSRTPPVTRRRSRSRTPPVT 1977

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 65/181 (35%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPP----TSVRAPPT---RAQTSEPA 192
            R+  R SP +R  RRS  +T  S  + RRS  R++P     +  R PP    R+++  PA
Sbjct: 1897 RSRSRTSPVSR--RRSRSRT--SPVTRRRSRSRASPVNRRRSRSRTPPVTRRRSRSRTPA 1952

Query: 193  APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
               ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR R+
Sbjct: 1953 NRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 2007

Query: 352  RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPP----RQRMGAPCRFRVAWGRSRGSA 519
            R  +P T   RRR+ S T P   R +R   +R+PP    R R   P   R    RSR  +
Sbjct: 2008 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPVIRRRSRSRTPLLTR---KRSRTRS 2057

Query: 520  P 522
            P
Sbjct: 2058 P 2058

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 59/188 (31%), Positives = 75/188 (39%), Gaps = 13/188 (6%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213
            R  + RSP  RG  RS  +   S     +  GRS   ++ R   +R+++           
Sbjct: 529  RWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSR--SAARRGRSRSRS----------- 575

Query: 214  ATPPPTRGRRES------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVCAPTTN 375
               P TRGR  S      GR RS    R+R  SR+     +R   P RR R+R   P   
Sbjct: 576  ---PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARR 632

Query: 376  WRRRRAP----SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRV---AWGRSRGSAPTRTT 534
              R R+P    S T  P     RGG +RS    R G   R R      GRSR   P R  
Sbjct: 633  RSRTRSPVRRRSRTRSP---ARRGGRSRSRTPARRGGRSRSRTPARRGGRSRSRTPARRG 689

Query: 535  TANGRVPA 558
             +  R PA
Sbjct: 690  RSRSRTPA 697

[8][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
            RepID=UPI0000484FB6
          Length = 2703

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
            R+  R SP +R   RS      ++  S  S RRS  R+ P T  R+    PTR ++    
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902

Query: 193  APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
             P+   ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957

Query: 343  CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
             R+R  +P T   RRR+ S TPP   R +R      P  R R  +P   R    RSR   
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010

Query: 520  P 522
            P
Sbjct: 2011 P 2011

[9][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Mus
            musculus RepID=Q8BTI8-3
          Length = 2603

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
            R+  R SP +R   RS      ++  S  S RRS  R+ P T  R+    PTR ++    
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902

Query: 193  APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
             P+   ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957

Query: 343  CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
             R+R  +P T   RRR+ S TPP   R +R      P  R R  +P   R    RSR   
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010

Query: 520  P 522
            P
Sbjct: 2011 P 2011

[10][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
            RepID=SRRM2_MOUSE
          Length = 2703

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 63/181 (34%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRS----HGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPA 192
            R+  R SP +R   RS      ++  S  S RRS  R+ P T  R+    PTR ++    
Sbjct: 1843 RSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRT 1902

Query: 193  APL---KA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRR 342
             P+   ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR
Sbjct: 1903 PPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR-----RR 1957

Query: 343  CRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRGSA 519
             R+R  +P T   RRR+ S TPP   R +R      P  R R  +P   R    RSR   
Sbjct: 1958 SRSRT-SPVT---RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRSRT 2010

Query: 520  P 522
            P
Sbjct: 2011 P 2011

[11][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
            splicing factor-related nuclear matrix protein of 300
            kDa) (Ser/Arg- related nuclear matrix protein)
            (SR-related nuclear matrix protein of 300 kDa) (Splicing
            coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
            familiaris RepID=UPI000184A2B2
          Length = 2682

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
 Frame = +1

Query: 40   SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA---PPTRAQTSEPAAPL--- 201
            S+RRS +     R   ++  S  S RRS  R+ P T  R+    PTR ++     P+   
Sbjct: 1820 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRR 1879

Query: 202  KA*VATPPPTRGRRESG-------RCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRTRVC 360
            ++   TPP TR RR          R RS   P  RR SRS   P TR     RR R+R  
Sbjct: 1880 RSRSRTPPVTR-RRSRSRTSITRRRSRSRTSPVTRRRSRSRTSPVTR-----RRSRSRT- 1932

Query: 361  APTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTRTT 534
            +P T   RRR+ S TPP   R +R   +R+P   R  +  R  +A  R   S   RTT
Sbjct: 1933 SPVT---RRRSRSRTPPAIRRRSR---SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTT 1984

[12][TOP]
>UniRef100_O60382 KIAA0324 (Fragment) n=1 Tax=Homo sapiens RepID=O60382_HUMAN
          Length = 1791

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
            R+  R SP +R  RRS  +T ++    RRS  R++P +  R+    PP    R+++  P 
Sbjct: 919  RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 973

Query: 193  APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336
               ++   TPP TR R  S        R RS   P  RR SRS   P TR      T P 
Sbjct: 974  TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 1033

Query: 337  RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513
             R R+R  + T+   RRR+ S TPP   R +R      P  R R  +P   R    RSR 
Sbjct: 1034 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 1088

Query: 514  SAPTRTTTANGR 549
              P    TA G+
Sbjct: 1089 RTP---RTARGK 1097

[13][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo
            sapiens RepID=Q9UQ35-2
          Length = 2334

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 66/199 (33%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
            R+  R SP +R  RRS  +T ++    RRS  R++P +  R+    PP    R+++  P 
Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941

Query: 193  APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
               ++   TPP TR R  S        R RS   P  RR SRS   P TR     RR R+
Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTR-----RRSRS 1996

Query: 352  RVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSPPRQ---RMGAPCRFR----------- 489
            R  +P T   RRR+ S T P   R +R   +R+PP Q   R   P  F            
Sbjct: 1997 RT-SPVT---RRRSRSRTSPVTRRRSR---SRTPPAQDQPRSPVPSAFSDQSRCLIAQTT 2049

Query: 490  -VAWGRSRGSAPTRTTTAN 543
             VA  +S  S    TTT++
Sbjct: 2050 PVAGSQSLSSGAVATTTSS 2068

[14][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
            RepID=SRRM2_HUMAN
          Length = 2752

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 65/192 (33%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRA----PPT---RAQTSEPA 192
            R+  R SP +R  RRS  +T ++    RRS  R++P +  R+    PP    R+++  P 
Sbjct: 1887 RSRSRTSPVSR--RRSRSRTSVT---RRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPT 1941

Query: 193  APLKA*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTR-----WTFPP 336
               ++   TPP TR R  S        R RS   P  RR SRS   P TR      T P 
Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 2001

Query: 337  RRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRGGWARSP-PRQRMGAPCRFRVAWGRSRG 513
             R R+R  + T+   RRR+ S TPP   R +R      P  R R  +P   R    RSR 
Sbjct: 2002 TRRRSR--SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR---RRSRS 2056

Query: 514  SAPTRTTTANGR 549
              P    TA G+
Sbjct: 2057 RTP---RTARGK 2065

[15][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
            Tax=Rattus norvegicus RepID=UPI0000DA333B
          Length = 2707

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 54/173 (31%), Positives = 69/173 (39%), Gaps = 8/173 (4%)
 Frame = +1

Query: 34   RASQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTRAQTSEPAAPLKA*V 213
            +   R  P  R  R S   T  +  S R     S+P T  R PP R ++          V
Sbjct: 1638 KTKSRTPPRRRSSRSSPELTRKARVSRRSRSASSSPETRSRTPPRRRRSPS--------V 1689

Query: 214  ATPPPTRGRRESGRCRSNQHPRKRRTSRSARGPPTRWTFPPR---RCRTRVCAPTTNWRR 384
            ++P PT   R S R RS   PR + TSR  R P  +    PR   R R+R     T   R
Sbjct: 1690 SSPEPTEKSRSSRRRRSVSSPRNKTTSRRGRSPSPK----PRGLQRSRSRSRREKTRTTR 1745

Query: 385  RRAPSLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGS-----APTR 528
            RR             R G ++S  R+R  +  R RV   R  GS     +PTR
Sbjct: 1746 RR------------DRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPTR 1786

[16][TOP]
>UniRef100_UPI000179EADD hypothetical protein LOC539526 n=1 Tax=Bos taurus
           RepID=UPI000179EADD
          Length = 474

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
 Frame = +3

Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
           PFE ++++  +Y+G  GE A   KP A     + PFS  T ++  + A   P    +P  
Sbjct: 233 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 292

Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
              P E      TT++T Y    GA    PA     A+SV +G G FEG ++ K+DY++W
Sbjct: 293 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 347

Query: 546 PGAR 557
              R
Sbjct: 348 ASTR 351

[17][TOP]
>UniRef100_UPI000179EADC Notchless homolog 1. n=1 Tax=Bos taurus RepID=UPI000179EADC
          Length = 477

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
 Frame = +3

Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
           PFE ++++  +Y+G  GE A   KP A     + PFS  T ++  + A   P    +P  
Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295

Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
              P E      TT++T Y    GA    PA     A+SV +G G FEG ++ K+DY++W
Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350

Query: 546 PGAR 557
              R
Sbjct: 351 ASTR 354

[18][TOP]
>UniRef100_Q32KR7 Hypothetical LOC539526 n=1 Tax=Bos taurus RepID=Q32KR7_BOVIN
          Length = 477

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
 Frame = +3

Query: 195 PFEGVSSYTATYKGPQGERALPFKP-APTEKENQPFSPWTTYKVDFPAKEVPYSRVRPNH 371
           PFE ++++  +Y+G  GE A   KP A     + PFS  T ++  + A   P    +P  
Sbjct: 236 PFESLTTHKESYRGLMGEPAKSLKPPARPYGLDTPFSNTTEFRDKYQAWPTPQVFSKPPS 295

Query: 372 QLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHG--RAVSVPRGVGPFEGLSSYKDDYRKW 545
              P E      TT++T Y    GA    PA     A+SV +G G FEG ++ K+DY++W
Sbjct: 296 MYVPPEEKMDLLTTVQTHYTYPKGA----PAESCRPALSVKKG-GRFEGSTTTKEDYKQW 350

Query: 546 PGAR 557
              R
Sbjct: 351 ASTR 354

[19][TOP]
>UniRef100_UPI000180CD30 PREDICTED: similar to CDKN1A interacting zinc finger protein 1 n=1
           Tax=Ciona intestinalis RepID=UPI000180CD30
          Length = 753

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 54/164 (32%), Positives = 68/164 (41%), Gaps = 4/164 (2%)
 Frame = +1

Query: 49  RSPAARGGRRSHGQTELSLQSTRRSIG-RSAPPTSVRAPPTRAQTSEPAAPLKA*VATPP 225
           RSP      RSH          +RS   R+   T+ R P  R +   PA+P +     PP
Sbjct: 102 RSPPRNIPPRSHSPNRAPSPDHKRSNSPRNDRSTNQRVPSPRQE--RPASPRERMPPRPP 159

Query: 226 -PTRGRRESGRCRSNQHPRKRR--TSRSARGPPTRWTFPPRRCRTRVCAPTTNWRRRRAP 396
            P R R  S R      PR+ R  + R  R P  R   PP   R R  +P  +WRRR   
Sbjct: 160 SPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPPSPRRERPRSPP-DWRRR--- 215

Query: 397 SLTPPPCVRTTRGGWARSPPRQRMGAPCRFRVAWGRSRGSAPTR 528
             +P P  R     W RSPP     +P R+    G  RG +P R
Sbjct: 216 --SPGPYYRGPPSDWRRSPPHWARRSPPRY----GPPRGRSPPR 253

[20][TOP]
>UniRef100_A8JAN6 Flagellar associated protein (Fragment) n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8JAN6_CHLRE
          Length = 173

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 43/138 (31%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
 Frame = +3

Query: 129 EKRAPYQ-RQGATYPRANLGTGGPFEGVSSYTATYKGPQGERALPFKPAPTEK-ENQPFS 302
           + RA YQ R+   + + N G    F G SSY   + G   E   PF P          F 
Sbjct: 9   DARAHYQGREIQLHGQPNAG----FAGQSSYKQDFPGHIPEPRQPFAPNQQYAGSGAAFD 64

Query: 303 PWTTYKVDFPAKEVPYSRVRPNHQLAPAEGPFVDATTMRTDYPGWMGAKPSTPAHGRAVS 482
             ++YK DFPA  +      P  Q  P   PF   +  R +Y G          H    +
Sbjct: 65  GHSSYKQDFPAHPIEPRPPAPGGQYQPNTAPFDGTSAYRDNYRGHNIDPSQYARHTGRPT 124

Query: 483 VPRGVGPFEGLSSYKDDY 536
            P    PF+G SSYK DY
Sbjct: 125 GPLSTAPFDGASSYKQDY 142

[21][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
           n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
          Length = 2677

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 60/198 (30%), Positives = 83/198 (41%), Gaps = 28/198 (14%)
 Frame = +1

Query: 49  RSPAARGGRRSHGQTELSLQSTRRSIGRSAP-PTSVRAPPTRAQTSEPAAPLKA*VATPP 225
           ++PA     R    ++   ++ R S   S+P P S +AP  R  +S P +P K     PP
Sbjct: 272 KAPAEPSPPRGRSPSKSPEKAPRSSSSESSPAPQSTKAP--RRASSSPDSPPK---PAPP 326

Query: 226 P----------------TRGRRESGRCRSNQHPRKRRTSRS---ARGPPTRWTFPPRRCR 348
           P                +RGR +  + RS    R+   SRS    R   +R   P R+ R
Sbjct: 327 PVTRREISPSPTTKSSRSRGRAKRDKSRSRSPSRRVGRSRSPATTRRGRSRSRTPARKGR 386

Query: 349 TRVCAPTTNWRRRRAP-----SLTPPPCVRT---TRGGWARSPPRQRMGAPCRFRVAWGR 504
           +R  + T  WRR R+P     S +P    R+    R GW+RS   QR G   R     GR
Sbjct: 387 SR--SRTPQWRRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGR-SRSTARRGR 443

Query: 505 SRGSAPTRTTTANGRVPA 558
           SR   P     +  R PA
Sbjct: 444 SRSKTPATRGRSRSRTPA 461

[22][TOP]
>UniRef100_UPI00015C36A1 pre-mRNA splicing factor cwc22 n=1 Tax=Neurospora crassa OR74A
            RepID=UPI00015C36A1
          Length = 795

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
 Frame = +1

Query: 40   SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207
            S  R+P  RG  RS+ +T    +S  RS  RS   +  R+PP R   ++  P+ P +   
Sbjct: 533  SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 592

Query: 208  -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
                    +P  +R R  S        R RS    R R  SRS   PP R    P R R 
Sbjct: 593  RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 650

Query: 352  RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501
             V     A   + +RRR  S +      PPP  R  RG ++RS  R R   P R     G
Sbjct: 651  PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 708

Query: 502  RSRGSA 519
            R  G A
Sbjct: 709  RDTGRA 714

[23][TOP]
>UniRef100_Q7RX84 Pre-mRNA-splicing factor cwc-22 n=1 Tax=Neurospora crassa
            RepID=CWC22_NEUCR
          Length = 1010

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 59/186 (31%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
 Frame = +1

Query: 40   SQRRSPAARGGRRSHGQTELSLQSTRRSIGRSAPPTSVRAPPTR--AQTSEPAAPLKA-- 207
            S  R+P  RG  RS+ +T    +S  RS  RS   +  R+PP R   ++  P+ P +   
Sbjct: 748  SLSRTPPRRGRGRSYSRTPSRSRSRSRSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRG 807

Query: 208  -----*VATPPPTRGRRES-------GRCRSNQHPRKRRTSRSARGPPTRWTFPPRRCRT 351
                    +P  +R R  S        R RS    R R  SRS   PP R    P R R 
Sbjct: 808  RSYDRYSRSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPPARGY--PTRGRA 865

Query: 352  RVC----APTTNWRRRRAPSLT------PPPCVRTTRGGWARSPPRQRMGAPCRFRVAWG 501
             V     A   + +RRR  S +      PPP  R  RG ++RS  R R   P R     G
Sbjct: 866  PVSNNDRAAAASGKRRREGSYSASRSPHPPPQQRLRRGSYSRS--RSRSPIPIRGNGPAG 923

Query: 502  RSRGSA 519
            R  G A
Sbjct: 924  RDTGRA 929

[24][TOP]
>UniRef100_C9SVF0 Pre-mRNA-splicing factor cwc22 n=1 Tax=Verticillium albo-atrum
            VaMs.102 RepID=C9SVF0_9PEZI
          Length = 845

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 60/204 (29%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
 Frame = +1

Query: 40   SQRRSPAARGGR-RSHGQTELSLQS-------------TRRSIGRSAPPTSVRAPPTRAQ 177
            S+ RSP +R GR RSH +   S +S              RR    S  P+  R     + 
Sbjct: 512  SRSRSPESRSGRKRSHSRGNSSSRSRSYTRSPSPPGRRARRDDSYSRSPSPKRGRRQSSY 571

Query: 178  TSEPAAPLK------A*VATPPPTRGRRESGRCRSNQHPRKRRT------------SRSA 303
            +  P+ P +      +   +PPP R RR S     ++ P  +R             SR A
Sbjct: 572  SRSPSPPARNAPRDRSLTRSPPPARRRRNSSSVSRSRSPAPKRAAAREPARSLSPYSRRA 631

Query: 304  RGPPTRWTFPPRRCRTRVCAPTTNWRRRRAPSLTPPPCVRTTRG--GWARSPPRQRMGAP 477
             G   R   PP R   R   P      RR PS +  P  R   G  G ARSPP  R+ AP
Sbjct: 632  AGLAARPRSPPAREPARREPP------RREPSRSLSPYSRRAAGLVGRARSPPPARVPAP 685

Query: 478  CRFRVAWGRSRGSAPTRTTTANGR 549
               R     + GSAP +    + R
Sbjct: 686  PPGRRRESSAGGSAPRKKPRYDSR 709