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[1][TOP]
>UniRef100_A8I4N7 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I4N7_CHLRE
Length = 109
Score = 238 bits (608), Expect = 2e-61
Identities = 109/109 (100%), Positives = 109/109 (100%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA
Sbjct: 1 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 60
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG
Sbjct: 61 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 109
[2][TOP]
>UniRef100_A9SIZ2 DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SIZ2_PHYPA
Length = 110
Score = 157 bits (398), Expect = 4e-37
Identities = 70/107 (65%), Positives = 82/107 (76%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTCAN+LLVE + LRYFC CPYVY +D+KISK L +K+VDDVLGGEDAWKN
Sbjct: 3 FCPTCANLLLVENPSMGRPLRYFCPTCPYVYVVDRKISKKLKLKKKEVDDVLGGEDAWKN 62
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
V +T TCP CSY QAYFM+IQ RSADEP T F+KC + C HRW+E
Sbjct: 63 VDRTTVTCPNCSYGQAYFMQIQIRSADEPMTTFYKCCNIDCNHRWKE 109
[3][TOP]
>UniRef100_C1MJC6 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MJC6_9CHLO
Length = 113
Score = 149 bits (377), Expect = 1e-34
Identities = 67/113 (59%), Positives = 84/113 (74%), Gaps = 4/113 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELT----EYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
M+T+CP+CANMLLV + S L+ CQ CPY Y++ K + P+ RK+VDDVLG
Sbjct: 1 MLTFCPSCANMLLVTTNAAGADASPCLKLICQTCPYAYDVTKTLRDDVPVTRKEVDDVLG 60
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
G+DAWKNV KT ATCPKC + QAYFM+IQ RSADEP + FFKCV+C ++WREG
Sbjct: 61 GDDAWKNVDKTAATCPKCDHGQAYFMQIQIRSADEPMSTFFKCVKCGNQWREG 113
[4][TOP]
>UniRef100_C1DZH6 DNA-directed RNA polymerase subunit n=1 Tax=Micromonas sp. RCC299
RepID=C1DZH6_9CHLO
Length = 109
Score = 146 bits (369), Expect = 9e-34
Identities = 65/109 (59%), Positives = 82/109 (75%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+++CP CANMLLV+ L+ +CQ CPY + I + I +ARKQVDDVLGG+DA
Sbjct: 1 MLSFCPHCANMLLVDHCPEGGGLKLYCQTCPYEHAITETIRDPIKIARKQVDDVLGGDDA 60
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
WKNV KT ATCPKC + QAYFM+IQ RSADEP + F+KC +CA++WREG
Sbjct: 61 WKNVDKTSATCPKCDHGQAYFMQIQIRSADEPMSTFYKCCKCANQWREG 109
[5][TOP]
>UniRef100_A7SWZ1 DNA-directed RNA polymerase subunit n=1 Tax=Nematostella vectensis
RepID=A7SWZ1_NEMVE
Length = 108
Score = 137 bits (344), Expect = 7e-31
Identities = 59/108 (54%), Positives = 78/108 (72%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+CAN+L+VE R+ CQ CPYV+NI KK+S K+VDDVLGG+ A
Sbjct: 1 MLLFCPSCANVLVVEEGTGPSAYRFACQTCPYVHNIAKKVSSKKYPKLKEVDDVLGGKSA 60
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W+NV T+ CPKC +++AYFM+IQTRSADEP T F+KC C +RW+E
Sbjct: 61 WENVDSTEERCPKCDHNRAYFMQIQTRSADEPMTTFYKCCSCGNRWKE 108
[6][TOP]
>UniRef100_Q8JH46 DNA-directed RNA polymerase subunit n=1 Tax=Sphoeroides nephelus
RepID=Q8JH46_9PERC
Length = 108
Score = 134 bits (337), Expect = 5e-30
Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K +R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T TCPKC + +AYFM+IQTRSADEP T F+KC QC HRWRE
Sbjct: 59 WENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRE 108
[7][TOP]
>UniRef100_UPI000186DC84 DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186DC84
Length = 108
Score = 134 bits (336), Expect = 6e-30
Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTCAN+L VE E + LR+ C CPY++NI +K+S K+VDDVLGG A
Sbjct: 1 MLLFCPTCANVLGVE--EGERSLRFACHTCPYIFNIARKVSSRYYPRLKEVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T+ CPKCS+ +AYFM+IQTRSADEP T F+KC +C HRWR+
Sbjct: 59 WENVDSTEERCPKCSHSRAYFMQIQTRSADEPMTTFYKCCNPECGHRWRD 108
[8][TOP]
>UniRef100_Q5FVV0 DNA-directed RNA polymerase subunit n=1 Tax=Xenopus (Silurana)
tropicalis RepID=Q5FVV0_XENTR
Length = 108
Score = 134 bits (336), Expect = 6e-30
Identities = 60/110 (54%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+N+++K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNVNRKVTSRKYPKLKEVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T TCPKC + +AYFM+IQTRSADEP T F+KC +QC HRWR+
Sbjct: 59 WENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108
[9][TOP]
>UniRef100_Q01CB3 RNA polymerase III subunit C11 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01CB3_OSTTA
Length = 117
Score = 134 bits (336), Expect = 6e-30
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 8/117 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEY--------SKELRYFCQCCPYVYNIDKKISKMAPLARKQVD 211
M+T+CPTCAN+LL+E +R C CPY Y++ + + RK VD
Sbjct: 1 MLTFCPTCANLLLIERESAVGTSSSGGGGGVRLRCAACPYAYDVVDGVRQRVKTTRKTVD 60
Query: 212 DVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
DVLGG++AW+NV KT TCP+C + +AYFM+IQ RSADEP ++F+KC +CAH+WREG
Sbjct: 61 DVLGGDEAWRNVDKTATTCPRCEHGEAYFMQIQIRSADEPMSVFYKCCECAHQWREG 117
[10][TOP]
>UniRef100_Q6P7G0 DNA-directed RNA polymerase subunit n=1 Tax=Xenopus laevis
RepID=Q6P7G0_XENLA
Length = 108
Score = 133 bits (334), Expect = 1e-29
Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+NI++K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNINRKVTSRKYPKLKEVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T TCPKC++ +AYFM+IQTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAETCPKCAHPRAYFMQIQTRSADEPMTTFYKCCNSQCGHRWRD 108
[11][TOP]
>UniRef100_Q4RHC2 DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4RHC2_TETNG
Length = 108
Score = 133 bits (334), Expect = 1e-29
Identities = 61/110 (55%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K +R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T TCPKC + +AYFM+IQTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
[12][TOP]
>UniRef100_A4RUS3 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RUS3_OSTLU
Length = 120
Score = 132 bits (332), Expect = 2e-29
Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 11/120 (9%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKE-----------LRYFCQCCPYVYNIDKKISKMAPLARK 202
M+T+CPTCAN+LL+E +R C CPY Y++ + + +K
Sbjct: 1 MLTFCPTCANLLLLERGAADASTSGAGAGVGGAVRLRCASCPYAYDVVDGVKQRVDARKK 60
Query: 203 QVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
VDDVLGG+DAW+NV KT ATCP C++ +AYFM+IQ RSADEP ++F+KCV+CA +WREG
Sbjct: 61 TVDDVLGGDDAWRNVDKTSATCPGCAHDEAYFMQIQIRSADEPMSVFYKCVKCARQWREG 120
[13][TOP]
>UniRef100_C3Y255 DNA-directed RNA polymerase subunit n=1 Tax=Branchiostoma floridae
RepID=C3Y255_BRAFL
Length = 108
Score = 132 bits (331), Expect = 2e-29
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTCAN+L+ E E K R+ CQ CPY+YNI KIS K+VDDVLGG +A
Sbjct: 1 MLLFCPTCANLLVAE--EGEKCYRFGCQTCPYIYNITHKISFKKYPKLKEVDDVLGGPEA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W NV T+ CPKC + +AYFM+IQTRSADEP T F+KC +C HRW++
Sbjct: 59 WANVDSTEEKCPKCEHPRAYFMQIQTRSADEPMTTFYKCCSAECGHRWKD 108
[14][TOP]
>UniRef100_UPI0000018387 UPI0000018387 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI0000018387
Length = 108
Score = 131 bits (329), Expect = 4e-29
Identities = 59/110 (53%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E + +R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQRCMRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T TCPKC + +A+FM+IQTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAETCPKCEHRRAFFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
[15][TOP]
>UniRef100_C3KJD5 DNA-directed RNA polymerase subunit n=1 Tax=Anoplopoma fimbria
RepID=C3KJD5_9PERC
Length = 108
Score = 130 bits (328), Expect = 5e-29
Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K +R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T TCPKC + +AYFM+IQTRSADEP T F+KC C HRWR+
Sbjct: 59 WENVDSTPETCPKCGHLRAYFMQIQTRSADEPMTTFYKCCSAPCGHRWRD 108
[16][TOP]
>UniRef100_B3S471 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S471_TRIAD
Length = 106
Score = 130 bits (328), Expect = 5e-29
Identities = 56/108 (51%), Positives = 77/108 (71%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP CAN L +E + + L + C CPY+Y + K I+ KQVDD+LGG+ A
Sbjct: 1 MLFFCPNCANALYME--KQGECLVFLCHTCPYLYKVTKTIASRNYPKLKQVDDILGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W+NV T+ATCPKC ++QA+FM+IQTRSADEP T+F+KC C HRW++
Sbjct: 59 WENVDSTEATCPKCDHNQAFFMQIQTRSADEPMTVFYKCCSCGHRWKD 106
[17][TOP]
>UniRef100_Q6DGU0 DNA-directed RNA polymerase subunit n=1 Tax=Danio rerio
RepID=Q6DGU0_DANRE
Length = 108
Score = 130 bits (327), Expect = 7e-29
Identities = 59/110 (53%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQRCFRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM+IQTRSADEP T F+KC +QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108
[18][TOP]
>UniRef100_C1BS50 DNA-directed RNA polymerase III subunit RPC10 n=1
Tax=Lepeophtheirus salmonis RepID=C1BS50_9MAXI
Length = 108
Score = 129 bits (324), Expect = 1e-28
Identities = 56/108 (51%), Positives = 72/108 (66%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L V +R+ C+ CPY N+ ++S K+VDDVLGG A
Sbjct: 1 MLMFCPNCGNILGVVEGVTDSCMRFACETCPYKRNVVSRLSDRVYPKLKEVDDVLGGSAA 60
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W+NV T+ TCP C +H+AYFM+IQTRSADEP T F+KCV C HRWRE
Sbjct: 61 WENVDSTEETCPNCDHHRAYFMQIQTRSADEPMTTFYKCVSCGHRWRE 108
[19][TOP]
>UniRef100_C1BZC8 DNA-directed RNA polymerase subunit n=1 Tax=Esox lucius
RepID=C1BZC8_ESOLU
Length = 108
Score = 128 bits (322), Expect = 3e-28
Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T CPKC + +AYFM+IQTRSADEP T F+KC +C HRWR+
Sbjct: 59 WENVDSTPEKCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNHECGHRWRD 108
[20][TOP]
>UniRef100_UPI00015B545C PREDICTED: similar to MGC68582 protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B545C
Length = 108
Score = 128 bits (321), Expect = 3e-28
Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L VE E + +R+ C CPY+ NI++++S K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLHVE--EGTVSMRFACNTCPYISNINRRVSSRTYPKLKEVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T+ CPKCS +AYFM+IQTRSADEP T F+KC QC H WRE
Sbjct: 59 WENVDSTEERCPKCSNMRAYFMQIQTRSADEPMTTFYKCCNPQCGHNWRE 108
[21][TOP]
>UniRef100_B7P467 DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Ixodes
scapularis RepID=B7P467_IXOSC
Length = 109
Score = 128 bits (321), Expect = 3e-28
Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Frame = +2
Query: 53 KMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGED 232
KM+ +CPTCAN+L+VE + + R+ C CPYV+NI K+S K VDDVLGG
Sbjct: 1 KMLLFCPTCANILIVE--QGLECFRFACNTCPYVHNIKAKMSNRKYPRLKDVDDVLGGAA 58
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
AW+NV T+ CPKC + +AYFM+IQTRSADEP T F+KC C H+WRE
Sbjct: 59 AWENVDSTEEKCPKCGHERAYFMQIQTRSADEPMTTFYKCCNQLCGHQWRE 109
[22][TOP]
>UniRef100_Q1RPU6 DNA-directed RNA polymerase subunit n=1 Tax=Ciona intestinalis
RepID=Q1RPU6_CIOIN
Length = 108
Score = 127 bits (320), Expect = 4e-28
Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L VE E ++ R+ C CPYV+NI +KIS K VDDVLGG A
Sbjct: 1 MLLFCPTCGNLLTVE--EGNQCYRFACPTCPYVHNITQKISSKKFPKLKAVDDVLGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W+NV T+ CPKC + +AYFM+IQTRSADEP T+F+KC C H+WRE
Sbjct: 59 WENVDSTEEKCPKCEHDRAYFMQIQTRSADEPMTIFYKCCSPTCGHQWRE 108
[23][TOP]
>UniRef100_UPI0000E49DF0 PREDICTED: similar to POLR3K n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E49DF0
Length = 107
Score = 127 bits (318), Expect = 7e-28
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTCAN+L+VE E K LR+ C CPYV+N+ +K++ K+VDDVLGG AW+N
Sbjct: 3 FCPTCANVLVVE--EGPKCLRFACNTCPYVHNVTRKLANRKYPRLKEVDDVLGGAAAWEN 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
V T CPKC + +AYFM++QTRSADEP T F+KC QC HRW E
Sbjct: 61 VDSTAEKCPKCEHPRAYFMQMQTRSADEPMTTFYKCCYQQCGHRWNE 107
[24][TOP]
>UniRef100_B5XDQ5 DNA-directed RNA polymerase subunit n=2 Tax=Salmoninae
RepID=B5XDQ5_SALSA
Length = 108
Score = 127 bits (318), Expect = 7e-28
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +A+FM+IQTRSADEP T F+KC +C HRWR+
Sbjct: 59 WENVDSTPEKCPKCEHPRAFFMQIQTRSADEPMTTFYKCCNYECGHRWRD 108
[25][TOP]
>UniRef100_Q17L91 DNA-directed RNA polymerase subunit n=1 Tax=Aedes aegypti
RepID=Q17L91_AEDAE
Length = 108
Score = 125 bits (315), Expect = 2e-27
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+LLVE E + LR+ C CPY+ I +KIS K+VD V+GG A
Sbjct: 1 MLMFCPTCGNLLLVE--EGTDSLRFSCNTCPYICKIKRKISTRIYPKLKEVDHVMGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W+NV TDA CP C++++AYFM++QTRSADEP T F+KC C H WRE
Sbjct: 59 WENVDSTDADCPACAHNRAYFMQMQTRSADEPMTTFYKCCNPTCGHNWRE 108
[26][TOP]
>UniRef100_B0X903 DNA-directed RNA polymerase subunit n=1 Tax=Culex quinquefasciatus
RepID=B0X903_CULQU
Length = 108
Score = 125 bits (314), Expect = 2e-27
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+LLVE E + LR+ C CPY+ I +KIS K+VD V+GG A
Sbjct: 1 MLMFCPTCGNLLLVE--EGTDSLRFSCNTCPYICKIKRKISTRIYPKLKEVDHVMGGSAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W+NV TDA CP C++++AYFM++QTRSADEP T F+KC C H WR+
Sbjct: 59 WENVDSTDADCPACAHNRAYFMQMQTRSADEPMTTFYKCANPVCGHNWRD 108
[27][TOP]
>UniRef100_Q6WCQ3 DNA-directed RNA polymerase subunit n=1 Tax=Ixodes scapularis
RepID=Q6WCQ3_IXOSC
Length = 108
Score = 125 bits (313), Expect = 3e-27
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTCAN+L+VE + + R+ C CPYV+NI K+S K VDDVLGG A
Sbjct: 1 MLLFCPTCANILIVE--QGLECFRFACNTCPYVHNIKAKMSNRKYPRLKDVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W+NV T+ CPKC + +AYFM+IQTRSADEP T F+KC C H+WR+
Sbjct: 59 WENVDSTEEKCPKCGHERAYFMQIQTRSADEPMTTFYKCCNQLCGHQWRD 108
[28][TOP]
>UniRef100_Q5KEF1 RNA polymerase III smallest subunit, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KEF1_CRYNE
Length = 132
Score = 124 bits (311), Expect = 5e-27
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP CAN L + E S + C CPY + I+++IS L RK+VDDVLGG++AW N
Sbjct: 3 FCPYCANSLTIGDREDSTDK--VCPTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWAN 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V KTD CPKC + +AYF ++Q RSADEP T F+KC +C H+WRE
Sbjct: 61 VDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCCECGHQWRE 105
[29][TOP]
>UniRef100_Q55P07 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q55P07_CRYNE
Length = 132
Score = 124 bits (311), Expect = 5e-27
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP CAN L + E S + C CPY + I+++IS L RK+VDDVLGG++AW N
Sbjct: 3 FCPYCANSLTIGDREDSTDK--VCPTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWAN 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V KTD CPKC + +AYF ++Q RSADEP T F+KC +C H+WRE
Sbjct: 61 VDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCCECGHQWRE 105
[30][TOP]
>UniRef100_B5X6F8 DNA-directed RNA polymerase subunit n=1 Tax=Salmo salar
RepID=B5X6F8_SALSA
Length = 108
Score = 124 bits (310), Expect = 6e-27
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +A+FM+IQTRSADE T F+KC +C HRWR+
Sbjct: 59 WENVDSTPEKCPKCEHPRAFFMQIQTRSADESMTTFYKCCNYECGHRWRD 108
[31][TOP]
>UniRef100_B3RF23 DNA-directed RNA polymerase subunit n=1 Tax=Sorex araneus
RepID=B3RF23_SORAR
Length = 108
Score = 124 bits (310), Expect = 6e-27
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPSCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCQHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
[32][TOP]
>UniRef100_UPI00005A1245 PREDICTED: similar to DNA-directed RNA polymerases III 12.5 kDa
polypeptide (RNA polymerase III C11 subunit) (HsC11p)
(hRPC11) n=1 Tax=Canis lupus familiaris
RepID=UPI00005A1245
Length = 132
Score = 123 bits (309), Expect = 8e-27
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 25 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAA 82
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T +CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 83 WENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 132
[33][TOP]
>UniRef100_Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 n=1 Tax=Homo sapiens
RepID=RPC10_HUMAN
Length = 108
Score = 123 bits (309), Expect = 8e-27
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFSCNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T +CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
[34][TOP]
>UniRef100_C1FXX2 DNA-directed RNA polymerase subunit n=1 Tax=Dasypus novemcinctus
RepID=C1FXX2_DASNO
Length = 108
Score = 122 bits (307), Expect = 1e-26
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTSRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
[35][TOP]
>UniRef100_A8NJC4 DNA-directed RNA polymerase subunit n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NJC4_COPC7
Length = 106
Score = 122 bits (307), Expect = 1e-26
Identities = 50/105 (47%), Positives = 77/105 (73%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTCAN+L++ ++ + ++ C CPY + I K+++ + KQVDDVLGG++ WK+
Sbjct: 3 FCPTCANILVI--SQETGVNKWACNTCPYEFPITKQMTSRTRMQLKQVDDVLGGDEMWKH 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+T A+CPKC++ +AYF ++Q RSADEP T F++CV CAH+WRE
Sbjct: 61 ADQTQASCPKCNFDKAYFYQLQIRSADEPMTTFYRCVNCAHQWRE 105
[36][TOP]
>UniRef100_Q9CQZ7 DNA-directed RNA polymerase III subunit RPC10 n=7 Tax=Eutheria
RepID=RPC10_MOUSE
Length = 108
Score = 122 bits (307), Expect = 1e-26
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
[37][TOP]
>UniRef100_UPI00005828F8 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6)
(RNA polymerase III subunit K). n=1 Tax=Bos taurus
RepID=UPI00005828F8
Length = 108
Score = 122 bits (306), Expect = 2e-26
Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+N+ +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNVTRKVTNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
[38][TOP]
>UniRef100_B8K127 DNA-directed RNA polymerase subunit n=1 Tax=Oryctolagus cuniculus
RepID=B8K127_RABIT
Length = 108
Score = 122 bits (306), Expect = 2e-26
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCSPQCGHRWRD 108
[39][TOP]
>UniRef100_B4ME99 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila virilis
RepID=B4ME99_DROVI
Length = 108
Score = 121 bits (304), Expect = 3e-26
Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CP++ I +KIS K+VD VLGG A
Sbjct: 1 MLFFCPSCGNILIIE--EDTSSHRFTCNTCPFISKIKRKISTKTYPRLKEVDHVLGGVAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC QC H WR+
Sbjct: 59 WENVDSTDAECPACSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
[40][TOP]
>UniRef100_B5G0B7 DNA-directed RNA polymerase subunit n=1 Tax=Taeniopygia guttata
RepID=B5G0B7_TAEGU
Length = 108
Score = 120 bits (302), Expect = 5e-26
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L+ E E + R+ C CPYV N+ +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPACGNVLVAE--EGPRCHRFACTTCPYVRNVTRKVTSRKYPRLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T CPKC + +AYFM+IQTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNPQCGHRWRD 108
[41][TOP]
>UniRef100_B4MPJ2 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila willistoni
RepID=B4MPJ2_DROWI
Length = 108
Score = 120 bits (302), Expect = 5e-26
Identities = 58/110 (52%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E S L C CPYV I KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNLLIIEEDTNSHHLS--CHTCPYVSKIRGKISTKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+++AYFM+IQTRSADEP T F+KC QC H WR+
Sbjct: 59 WENVDSTDAECPACSHNRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
[42][TOP]
>UniRef100_B4KR43 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila mojavensis
RepID=B4KR43_DROMO
Length = 108
Score = 120 bits (302), Expect = 5e-26
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CP++ I +KI+ K+VD VLGG A
Sbjct: 1 MLFFCPSCGNILIIE--EDTSSHRFTCNTCPFISKIKRKITTKTYPRLKEVDHVLGGVAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC QC H WR+
Sbjct: 59 WENVDSTDAECPSCSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
[43][TOP]
>UniRef100_Q8BU05 DNA-directed RNA polymerase subunit n=1 Tax=Mus musculus
RepID=Q8BU05_MOUSE
Length = 107
Score = 120 bits (301), Expect = 7e-26
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C N L+VE E + R+ C CPYV+NI +K++ K+VDDVLGG AW+N
Sbjct: 3 FCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAAWEN 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
V T CPKC + +AYFM++QTRSADEP T F+KC QC HRWR+
Sbjct: 61 VDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 107
[44][TOP]
>UniRef100_B0D7I7 DNA-directed RNA polymerase subunit n=1 Tax=Laccaria bicolor
S238N-H82 RepID=B0D7I7_LACBS
Length = 106
Score = 120 bits (300), Expect = 9e-26
Identities = 52/106 (49%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +2
Query: 65 YCPTCANMLLVEL-TEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWK 241
+CPTCAN+L++ T Y+K + C C Y + I K+++ L RKQVDDVLGG++ W
Sbjct: 3 FCPTCANLLVISSETGYNK---WACNTCAYEFPISKQMTSRTRLVRKQVDDVLGGDEMWA 59
Query: 242 NVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ +T A+C KC++ QAYF ++Q RSADEP T F++C CAH+WRE
Sbjct: 60 HADQTQASCDKCNHDQAYFYQLQIRSADEPMTTFYRCTSCAHQWRE 105
[45][TOP]
>UniRef100_B4PA35 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila yakuba
RepID=B4PA35_DROYA
Length = 108
Score = 119 bits (299), Expect = 1e-25
Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTNCHRFTCNTCPYISKIRRKISAKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC +C H WR+
Sbjct: 59 WENVDSTDAECPTCSHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
[46][TOP]
>UniRef100_B5KFS3 DNA-directed RNA polymerase subunit n=1 Tax=Taeniopygia guttata
RepID=B5KFS3_TAEGU
Length = 108
Score = 119 bits (297), Expect = 2e-25
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L+ E E + R+ C CPYV N+ +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPACGNVLVAE--EGPRCHRFACTTCPYVRNVTRKVTSRKYPRLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV T CPKC + +AYFM+ QTRSADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQTQTRSADEPMTTFYKCCNPQCGHRWRD 108
[47][TOP]
>UniRef100_B3NJW4 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila erecta
RepID=B3NJW4_DROER
Length = 108
Score = 118 bits (296), Expect = 3e-25
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTNCHRFTCNTCPYISKIRRKISAKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+ +AYFM++QTRSADEP T F+KC +C H WR+
Sbjct: 59 WENVDSTDAECPTCSHKRAYFMQMQTRSADEPMTTFYKCCNHECNHTWRD 108
[48][TOP]
>UniRef100_A1ZBX4 DNA-directed RNA polymerase subunit n=2 Tax=melanogaster subgroup
RepID=A1ZBX4_DROME
Length = 108
Score = 118 bits (295), Expect = 3e-25
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTNCHRFTCNTCPYISKIRRKISTKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP C + +AYFM+IQTRSADEP T F+KC +C H WR+
Sbjct: 59 WENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
[49][TOP]
>UniRef100_Q6BMC8 DNA-directed RNA polymerase subunit n=1 Tax=Debaryomyces hansenii
RepID=Q6BMC8_DEBHA
Length = 111
Score = 117 bits (294), Expect = 4e-25
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP CANML++ + R+FC CPY + ID ++ L+RK+VDDVLGGE
Sbjct: 1 MLSFCPYCANMLIMAQKDDGCN-RFFCSTCPYEFKIDGFQMYDRKKLSRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP C +AYF ++Q RSADEP T F+KCV+C+H+WRE
Sbjct: 60 AWDNVDQTLAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCSHQWRE 110
[50][TOP]
>UniRef100_C5M563 DNA-directed RNA polymerase subunit n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M563_CANTT
Length = 111
Score = 117 bits (294), Expect = 4e-25
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+T+CP C+NMLL+ T R++C CPYV+ I ++ L RK+VDDVLGGE
Sbjct: 1 MLTFCPNCSNMLLIN-TGNDGLNRFYCSTCPYVFKISGLQMYDRKKLHRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T A CP C +AYF ++Q RSADEP T F+KCV+C HRW+E
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWKE 110
[51][TOP]
>UniRef100_Q2M2S7 DNA-directed RNA polymerase III subunit RPC10 n=1 Tax=Bos taurus
RepID=RPC10_BOVIN
Length = 108
Score = 117 bits (294), Expect = 4e-25
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N L+VE E + R+ C CPYV+N+ +K++ K+VDD LGG A
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNVTRKVTNRKYPKLKEVDDELGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
W+NV T CPKC + +AYFM++QTR ADEP T F+KC QC HRWR+
Sbjct: 59 WENVDSTAEPCPKCEHPRAYFMQLQTRYADEPMTTFYKCCNAQCGHRWRD 108
[52][TOP]
>UniRef100_UPI000151ABB6 hypothetical protein PGUG_01395 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151ABB6
Length = 111
Score = 117 bits (293), Expect = 6e-25
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C+NMLLV L+E R +C CPY + I+ ++ L+RKQVDDVLGG+
Sbjct: 1 MLSFCPYCSNMLLVGLSEDGCN-RLYCTTCPYEFKINGLQMYDRKNLSRKQVDDVLGGDG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW+NV +T A CP C +AYF ++Q RSADEP T F+KCV+C H+WRE
Sbjct: 60 AWENVDQTAAQCPVDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCNHQWRE 110
[53][TOP]
>UniRef100_C4YKX9 DNA-directed RNA polymerase subunit n=1 Tax=Candida albicans
RepID=C4YKX9_CANAL
Length = 111
Score = 117 bits (293), Expect = 6e-25
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+T+CP C+NMLL+ + R++C CPY + I+ ++ L RKQVDDVLGGE
Sbjct: 1 MLTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKINGLQMYDRKKLNRKQVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T A CP C +AYF ++Q RSADEP T F+KCV+C HRW+E
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWKE 110
[54][TOP]
>UniRef100_UPI0000D554AC PREDICTED: similar to POLR3K n=1 Tax=Tribolium castaneum
RepID=UPI0000D554AC
Length = 108
Score = 117 bits (292), Expect = 8e-25
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L + T L + C+ CP + I KIS K VDDVLGGEDA
Sbjct: 1 MVVFCPFCGNLLFAQQT--CGRLGFACRICPVSFPIRGKISNRTYFQVKSVDDVLGGEDA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
WKN T TCP+CS+ AYF+++QTRSADEP T F++C +CAH WRE
Sbjct: 59 WKNCDVTAETCPECSHPHAYFLQVQTRSADEPMTNFYRCCNPECAHNWRE 108
[55][TOP]
>UniRef100_UPI00003BE0F5 hypothetical protein DEHA0F07216g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE0F5
Length = 111
Score = 117 bits (292), Expect = 8e-25
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP CANML++ + R+FC CPY + ID ++ L+RK+VDDVLGGE
Sbjct: 1 MLSFCPYCANMLIMAQKDDGCN-RFFCLTCPYEFKIDGFQMYDRKKLSRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP C +AYF ++Q RSADEP T F+KCV+C+H+WRE
Sbjct: 60 AWDNVDQTLAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCSHQWRE 110
[56][TOP]
>UniRef100_Q28ZP6 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q28ZP6_DROPS
Length = 335
Score = 116 bits (291), Expect = 1e-24
Identities = 57/118 (48%), Positives = 75/118 (63%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTDSHRFTCNTCPYISKITRKISTKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG*GVPAASTP 409
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC C H + V TP
Sbjct: 59 WENVDSTDADCPSCSHKRAYFMQIQTRSADEPMTTFYKC--CNHHTMQHQTVEKTKTP 114
[57][TOP]
>UniRef100_B4J958 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila grimshawi
RepID=B4J958_DROGR
Length = 108
Score = 116 bits (291), Expect = 1e-24
Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CP++ I +KI+ K+VD VLGG A
Sbjct: 1 MLFFCPSCGNILIIE--EDTSSHRFTCHTCPFISKIKRKITTKTFPRLKEVDHVLGGIAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC QC + WR+
Sbjct: 59 WENVDSTDAECPACSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGNTWRD 108
[58][TOP]
>UniRef100_B4GGZ5 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila persimilis
RepID=B4GGZ5_DROPE
Length = 335
Score = 116 bits (291), Expect = 1e-24
Identities = 57/118 (48%), Positives = 75/118 (63%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTDSHRFTCNTCPYISKITRKISTKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG*GVPAASTP 409
W+NV TDA CP CS+ +AYFM+IQTRSADEP T F+KC C H + V TP
Sbjct: 59 WENVDSTDADCPSCSHKRAYFMQIQTRSADEPMTTFYKC--CNHHTMQHQTVEKTKTP 114
[59][TOP]
>UniRef100_A8BG20 DNA-directed RNA polymerase subunit n=1 Tax=Giardia lamblia ATCC
50803 RepID=A8BG20_GIALA
Length = 105
Score = 116 bits (291), Expect = 1e-24
Identities = 48/105 (45%), Positives = 73/105 (69%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C N+LL+EL S +++++C+ C Y Y + +IS+ L RK VD VLGGE AW+
Sbjct: 3 FCPCCGNLLLIEL---SGDVQFYCKTCAYRYTLSGQISRSLTLTRKSVDPVLGGETAWQG 59
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
KT CP C++ A+++++Q RS+DEP + F++C QCAH+WRE
Sbjct: 60 ADKTQNPCPVCAFPDAFWIQMQIRSSDEPMSRFYRCCQCAHQWRE 104
[60][TOP]
>UniRef100_Q5A5N9 DNA-directed RNA polymerase subunit n=1 Tax=Candida albicans
RepID=Q5A5N9_CANAL
Length = 111
Score = 116 bits (290), Expect = 1e-24
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+T+CP C+NMLL+ + R++C CPY + I+ ++ L RK+VDDVLGGE
Sbjct: 1 MLTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKINGLQMYDRKKLNRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T A CP C +AYF ++Q RSADEP T F+KCV+C HRW+E
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWKE 110
[61][TOP]
>UniRef100_B9WCW5 DNA-directed RNA polymerase subunit n=1 Tax=Candida dubliniensis
CD36 RepID=B9WCW5_CANDC
Length = 111
Score = 116 bits (290), Expect = 1e-24
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+T+CP C+NMLL+ + R++C CPY + I+ ++ L RK+VDDVLGGE
Sbjct: 1 MLTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKINGLQMYDRKKLHRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T A CP C +AYF ++Q RSADEP T F+KCV+C HRW+E
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWKE 110
[62][TOP]
>UniRef100_Q9N4B7 DNA-directed RNA polymerase subunit n=1 Tax=Caenorhabditis elegans
RepID=Q9N4B7_CAEEL
Length = 108
Score = 115 bits (288), Expect = 2e-24
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+T+CP C +L +E E +R+ C CPYV + + ++ K +DDVLGG A
Sbjct: 1 MLTFCPECGCVLQIESGEQC--MRFSCPACPYVCPVTQTVTSRIYPKLKDIDDVLGGPGA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W N TD TCP CS+ +AYFM++QTRSADEP+T+F++C CAHRW++
Sbjct: 59 WANAQVTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWKD 108
[63][TOP]
>UniRef100_A5DDP4 DNA-directed RNA polymerase subunit n=1 Tax=Pichia guilliermondii
RepID=A5DDP4_PICGU
Length = 111
Score = 115 bits (287), Expect = 3e-24
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C+NMLLV +E R +C CPY + I+ ++ L+RKQVDDVLGG+
Sbjct: 1 MLSFCPYCSNMLLVGSSEDGCN-RLYCTTCPYEFKINGLQMYDRKNLSRKQVDDVLGGDG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW+NV +T A CP C +AYF ++Q RSADEP T F+KCV+C H+WRE
Sbjct: 60 AWENVDQTAAQCPVDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCNHQWRE 110
[64][TOP]
>UniRef100_C6LXC5 DNA-directed RNA polymerase subunit n=1 Tax=Giardia intestinalis
ATCC 50581 RepID=C6LXC5_GIALA
Length = 105
Score = 114 bits (286), Expect = 4e-24
Identities = 47/105 (44%), Positives = 73/105 (69%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C N+LL+EL + +++++C+ C Y Y + +IS+ L RK VD VLGGE AW+
Sbjct: 3 FCPCCGNLLLIEL---AGDVQFYCKTCSYRYTLSGQISRSLTLTRKSVDPVLGGETAWQG 59
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
KT CP C + +A+++++Q RS+DEP + F++C QCAH+WRE
Sbjct: 60 ADKTHNPCPICMFPEAFWIQMQIRSSDEPMSRFYRCCQCAHQWRE 104
[65][TOP]
>UniRef100_A8XIZ3 DNA-directed RNA polymerase subunit n=1 Tax=Caenorhabditis briggsae
RepID=A8XIZ3_CAEBR
Length = 108
Score = 114 bits (286), Expect = 4e-24
Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+T+CP C +L +E E ++ + C CPYV I IS K +DDVLGG A
Sbjct: 1 MLTFCPECGCVLQIETGEQCQQ--FSCSACPYVCPIVATISSRIYPKLKDIDDVLGGPGA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+N TD CP CS+ +AYFM++QTRSADEP T+F++C CAHRW+E
Sbjct: 59 WENAQVTDERCPLCSHERAYFMQLQTRSADEPMTIFYRCANNSCAHRWKE 108
[66][TOP]
>UniRef100_A3LW94 DNA-directed RNA polymerase subunit n=1 Tax=Pichia stipitis
RepID=A3LW94_PICST
Length = 111
Score = 114 bits (286), Expect = 4e-24
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C+NMLL+ + R++C CPY + I+ + + L RK+VDDVLGG+
Sbjct: 1 MLSFCPNCSNMLLISAGDDGCN-RFYCPTCPYEFKINGLSMFERKKLYRKEVDDVLGGDG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP C ++AYF ++Q RSADEP T F+KCV C H+W+E
Sbjct: 60 AWDNVDQTSAQCPVDSCGGNKAYFFQLQIRSADEPMTTFYKCVNCGHKWKE 110
[67][TOP]
>UniRef100_Q70W34 DNA-directed RNA polymerase subunit n=1 Tax=Kluyveromyces lactis
RepID=Q70W34_KLULA
Length = 112
Score = 113 bits (282), Expect = 1e-23
Identities = 56/112 (50%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C NMLLV + S + C CPY + ID ++ L RK+VDDVLGGE
Sbjct: 1 MLSFCPLCNNMLLVSKAD-SGLYKLACGSCPYQFLIDGIEVYDRKNLPRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCP---KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP +C+ +AYF ++Q RSADEP T F+KCV C H+WRE
Sbjct: 60 AWDNVDQTAAQCPNHDQCAGERAYFFQLQIRSADEPMTTFYKCVNCGHKWRE 111
[68][TOP]
>UniRef100_B0ENS7 DNA-directed RNA polymerase III subunit RPC10, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0ENS7_ENTDI
Length = 107
Score = 112 bits (281), Expect = 1e-23
Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M +C C N+L+VE EL + C CPY + +KKI + L RKQ+D VLG E+
Sbjct: 1 MTFFCANCGNLLVVER---GTELYFKCSTCPYKFTFNKKIVYESELKRKQIDAVLG-EEQ 56
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWREG 382
WKN KT+ C KC Y+ AYFM+IQ RSADEP T F+KC C ++WR+G
Sbjct: 57 WKNAQKTEIICEKCGYNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
[69][TOP]
>UniRef100_A9QVW4 DNA-directed RNA polymerase subunit n=1 Tax=Caenorhabditis brenneri
RepID=A9QVW4_CAEBE
Length = 108
Score = 112 bits (281), Expect = 1e-23
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+T+CP C L +E + R+ C CPYV + +S K +DDVLGG A
Sbjct: 1 MLTFCPECGCTLQIEQGDQCN--RFSCPACPYVCPVTHSVSSRIYPKLKDIDDVLGGPGA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
W+N TD CP CS+ +AYFM++QTRSADEP T+F++C CAHRW+E
Sbjct: 59 WENAQITDERCPVCSHERAYFMQLQTRSADEPMTIFYRCANNACAHRWKE 108
[70][TOP]
>UniRef100_B3MIT9 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila ananassae
RepID=B3MIT9_DROAN
Length = 342
Score = 112 bits (279), Expect = 2e-23
Identities = 52/104 (50%), Positives = 72/104 (69%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KI+ K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTSCHRFTCNTCPYISKIKRKITAKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAH 367
W+NV TDA CP+CS+ +AYFM++QTRSADEP T F+KC C H
Sbjct: 59 WENVDSTDAECPQCSHKRAYFMQLQTRSADEPMTTFYKC--CNH 100
[71][TOP]
>UniRef100_C4Y9I4 DNA-directed RNA polymerase subunit n=1 Tax=Clavispora lusitaniae
ATCC 42720 RepID=C4Y9I4_CLAL4
Length = 111
Score = 112 bits (279), Expect = 2e-23
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C+NMLLV E + R +C CPY + I ++ + L RK VDDVLGG+
Sbjct: 1 MLSFCPYCSNMLLVSQGEDNCN-RLYCPTCPYEFRISGFQMFERKMLPRKDVDDVLGGDG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP C +AYF ++Q RSADEP T F+KC +C+H+WRE
Sbjct: 60 AWDNVDQTAAQCPIDSCGNDKAYFFQLQIRSADEPMTTFYKCTKCSHQWRE 110
[72][TOP]
>UniRef100_B5Y459 RNA polymerase C subunit 11 kDa n=1 Tax=Phaeodactylum tricornutum
CCAP 1055/1 RepID=B5Y459_PHATR
Length = 111
Score = 110 bits (276), Expect = 5e-23
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELR---YFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
+CP +L V++ + ++C CPY +ID + P RK VDD+LGG A
Sbjct: 3 FCPLDGTLLQVQIRSGAVPAENSFFYCSTCPYSCSIDAPRTVKTPTKRKVVDDILGGAAA 62
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W+NV +T A CP C++++AYFM++Q RSADEP ++F+KCVQC+H+W +
Sbjct: 63 WENVDRTMAVCPACNHNEAYFMQMQIRSADEPMSIFYKCVQCSHQWND 110
[73][TOP]
>UniRef100_C4M8P1 RNA polymerase III subunit, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M8P1_ENTHI
Length = 107
Score = 110 bits (276), Expect = 5e-23
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M +C C N+L+VE EL + C CPY + +KKI + L RKQ+D VLG E+
Sbjct: 1 MTFFCANCGNLLVVER---GTELYFKCNTCPYKFTFNKKIVYESELKRKQIDAVLG-EEQ 56
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWREG 382
WKN KT+ C KC ++ AYFM+IQ RSADEP T F+KC C ++WR+G
Sbjct: 57 WKNAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
[74][TOP]
>UniRef100_B6K8S3 DNA-directed RNA polymerase subunit n=3 Tax=Toxoplasma gondii
RepID=B6K8S3_TOXGO
Length = 106
Score = 110 bits (274), Expect = 9e-23
Identities = 51/108 (47%), Positives = 67/108 (62%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M +CPTC NMLLV +++ C+ CPYV+NI +K+++ PL K+ D+ L
Sbjct: 1 MALFCPTCHNMLLVR---QEVTMQFHCRTCPYVFNIKEKLTRKMPLTPKKADEPLDESQE 57
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AK A+CPKCS+ +AYF EIQ RSADEP T F+ C C RWRE
Sbjct: 58 AARGAKAPASCPKCSHTEAYFYEIQIRSADEPMTAFYCCCNCRFRWRE 105
[75][TOP]
>UniRef100_Q750C6 DNA-directed RNA polymerase subunit n=1 Tax=Eremothecium gossypii
RepID=Q750C6_ASHGO
Length = 112
Score = 107 bits (268), Expect = 5e-22
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C NML V + S R C CPY + I+ +I L RK+VDDVLGGE
Sbjct: 1 MLSFCPYCNNMLPVSKGD-SGVYRLGCPSCPYEFPIEGVEIYDRRNLPRKEVDDVLGGEG 59
Query: 233 AWKNVAKTDATCPK---CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T CP+ C +AYF ++Q RSADEP T F+KCV C H+WRE
Sbjct: 60 AWDNVDQTAVQCPQHETCGGEKAYFFQLQIRSADEPMTTFYKCVTCGHKWRE 111
[76][TOP]
>UniRef100_Q6C866 DNA-directed RNA polymerase subunit n=1 Tax=Yarrowia lipolytica
RepID=Q6C866_YARLI
Length = 110
Score = 107 bits (267), Expect = 6e-22
Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 8/116 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNI-------DKKISKMAPLARKQVDD 214
M+T+CPTC NML L+ +R+ C+ CPY Y + D+K+ L +K+VD
Sbjct: 1 MLTFCPTCTNMLT--LSTSGNGMRFECRTCPYEYYLQDGTIVYDRKV-----LEKKKVDS 53
Query: 215 VLGGEDAWKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
VLGGE+AW+NV K + CPKCS AYF +Q RSADEP T F +C C H+WRE
Sbjct: 54 VLGGENAWENVDKDPGSQCPKCSNMGAYFYMLQIRSADEPMTKFCRCTACFHQWRE 109
[77][TOP]
>UniRef100_C4R616 DNA-directed RNA polymerase subunit n=1 Tax=Pichia pastoris GS115
RepID=C4R616_PICPG
Length = 111
Score = 107 bits (266), Expect = 8e-22
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNI-DKKISKMAPLARKQVDDVLGGED 232
M+ +CP C NML V S R+ C CPY + I ++ + L+RKQVDDVLGG
Sbjct: 1 MLMFCPNCQNMLTVTKAADSIN-RFNCPTCPYEFPIVGMQMYERKDLSRKQVDDVLGGAG 59
Query: 233 AWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AW NV +T A CP C +AYF ++Q RSADEP T F KC +C H+WRE
Sbjct: 60 AWDNVDQTGAQCPIDSCGGDKAYFFQLQIRSADEPMTTFLKCCKCGHQWRE 110
[78][TOP]
>UniRef100_Q0U901 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U901_PHANO
Length = 118
Score = 106 bits (265), Expect = 1e-21
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 10/118 (8%)
Frame = +2
Query: 56 MITYCPTCANMLLVEL-------TEYSK-ELRYFCQCCPYVYNIDKKISKMAPLARKQVD 211
M+ +CPTC+N+L V TE + E R+ C CPY + I+K+ + + +K+V+
Sbjct: 1 MLLFCPTCSNVLRVSKVPPGDPNTEMNVGENRFECLTCPYQFVINKRYFERKYMKKKEVE 60
Query: 212 DVLGGEDAWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
D+LGG+ AW NV KT CP KC +AY+ ++Q RSADEP T F+KC +CA WRE
Sbjct: 61 DILGGKGAWDNVDKTQVQCPNEKCRNDEAYWYQLQIRSADEPMTAFYKCTKCAKEWRE 118
[79][TOP]
>UniRef100_B4HQM8 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila sechellia
RepID=B4HQM8_DROSE
Length = 325
Score = 106 bits (264), Expect = 1e-21
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+C N+L++E E + R+ C CPY+ I +KIS K+VD VLGG+ A
Sbjct: 1 MLFFCPSCGNILIIE--EDTNCHRFTCNTCPYISKIRRKISTKTFPRLKEVDHVLGGKAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ 358
W+NV TDA CP C + +AYFM+IQTRSADEP T F+ +Q
Sbjct: 59 WENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYNRMQ 99
[80][TOP]
>UniRef100_A8QFI6 DNA-directed RNA polymerase subunit n=1 Tax=Brugia malayi
RepID=A8QFI6_BRUMA
Length = 108
Score = 106 bits (264), Expect = 1e-21
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C + L +E E S ++ C CPYV I K I K +D+VLGG A
Sbjct: 1 MLLFCPECGSSLQIE--EGSNCYQFACHNCPYVQPITKLIRSRHYPKLKDLDEVLGGPGA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
W+N T+ CP+C+ +AYFM++QTRSADEP T+F++C +CAHRW+E
Sbjct: 59 WENAQITNERCPRCAGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWKE 108
[81][TOP]
>UniRef100_Q4P5F3 DNA-directed RNA polymerase subunit n=1 Tax=Ustilago maydis
RepID=Q4P5F3_USTMA
Length = 111
Score = 106 bits (264), Expect = 1e-21
Identities = 45/90 (50%), Positives = 66/90 (73%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTCAN L+++L ++ ++ C CPY + I ++++ L RKQVDDV+GGE++WKN
Sbjct: 3 FCPTCANCLIIQLDDHGNN-KWSCHTCPYEFPIVRQMTTRQHLKRKQVDDVMGGEESWKN 61
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPA 334
V TDA CPKC +A+FM++Q RSADEP+
Sbjct: 62 VDSTDAPCPKCENPKAFFMQLQIRSADEPS 91
[82][TOP]
>UniRef100_C0NUV3 DNA-directed RNA polymerase subunit n=2 Tax=Ajellomyces capsulatus
RepID=C0NUV3_AJECG
Length = 117
Score = 106 bits (264), Expect = 1e-21
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + S R+ C+ CPY Y +D+ + + RK+V DVLG
Sbjct: 3 LTFCPNCSNALTISRADPSPRYPLGVNRFECRTCPYQYILDRTYYERTEMKRKEVSDVLG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G+D WKN CP C +AYF ++Q RSADEP T FFKC C RWRE
Sbjct: 63 GKDEWKNADSQGTQCPAEGCDGDRAYFYQLQIRSADEPMTTFFKCTTCGARWRE 116
[83][TOP]
>UniRef100_UPI0000EB34E7 DNA-directed RNA polymerase III subunit RPC10 (RNA polymerase III
subunit C10) (DNA-directed RNA polymerase III subunit K)
(RNA polymerase III subunit C11) (RPC11) (HsC11p)
(hRPC11) (DNA-directed RNA polymerases III 12.5 kDa
polypeptide). n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB34E7
Length = 109
Score = 105 bits (262), Expect = 2e-21
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLAR-KQVDDVLGGED 232
M+ +CP C N L+VE E + R+ C CPYV+NI +K+ + K+VDDVLGG
Sbjct: 1 MLLFCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVVTNRKYPKLKEVDDVLGGAA 58
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRW 373
AW+NV T +CPKC + +AYFM++QTRSADEP T F+K H W
Sbjct: 59 AWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYK---SCHSW 102
[84][TOP]
>UniRef100_Q2KF11 DNA-directed RNA polymerase subunit n=2 Tax=Magnaporthe grisea
RepID=Q2KF11_MAGGR
Length = 110
Score = 105 bits (262), Expect = 2e-21
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP+CAN+L V E K R C+ CPY + I++ + ARK+ +DV GG A
Sbjct: 1 MLLFCPSCANVLTVSAMETGKN-RLECRTCPYEFAINEPLFSRKEFARKEREDVFGGPGA 59
Query: 236 WKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W N K CP C +A F ++Q RSADEP T F+KC+ C HRWRE
Sbjct: 60 WDNAQKGRVQCPADNCDGEEAAFFQVQIRSADEPMTSFYKCMTCGHRWRE 109
[85][TOP]
>UniRef100_C6T364 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T364_SOYBN
Length = 111
Score = 104 bits (259), Expect = 5e-21
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGEDAW 238
+CPTC NML EL + R+FC CPYV I+ + I + L K+++ + ED
Sbjct: 3 FCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFS-EDDM 61
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWREG 382
N A T+ATCP C + +A F E QTRSAD PATLF+KC+ +C +WREG
Sbjct: 62 TNAASTEATCPFCGHGKAAFKEFQTRSADGPATLFYKCLNNECKKQWREG 111
[86][TOP]
>UniRef100_C5K7H8 DNA-directed RNA polymerase subunit n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5K7H8_9ALVE
Length = 594
Score = 103 bits (257), Expect = 9e-21
Identities = 44/102 (43%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
+ +CPTC N+L+++ + ++Y+C+ CPY++ I +K+++ L ++ V+DVLGG DAW
Sbjct: 360 VLFCPTCGNLLVLQAGHDT--MKYWCRTCPYLFPISEKLTQKEILHKEVVEDVLGGPDAW 417
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQ 358
K+V +T+A CP C ++AYF ++Q RSADEP T F++CV+
Sbjct: 418 KDVQQTEAVCPADGCDSNRAYFKQMQIRSADEPMTTFYRCVK 459
[87][TOP]
>UniRef100_B2VRT8 Putative uncharacterized protein n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2VRT8_PYRTR
Length = 108
Score = 103 bits (257), Expect = 9e-21
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 107 EYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKTDATCP--KCS 280
+Y + R+ C CPY + I+ + + + +K VDDV+GG+DAW NV KT+ CP KC
Sbjct: 16 DYVDKNRFVCLTCPYQFVIEGRYFERKYMKKKDVDDVIGGKDAWANVDKTEVQCPNEKCR 75
Query: 281 YHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
H+AY+ ++Q RSADEP T F+KC QCA WRE
Sbjct: 76 NHEAYWYQLQIRSADEPMTAFYKCTQCAKEWRE 108
[88][TOP]
>UniRef100_UPI0000ECAA73 DNA-directed RNA polymerase III subunit RPC10 (RNA polymerase III
subunit C10) (DNA-directed RNA polymerase III subunit K)
(RNA polymerase III subunit C11) (RPC11) (HsC11p)
(hRPC11) (DNA-directed RNA polymerases III 12.5 kDa
polypeptide). n=1 Tax=Gallus gallus RepID=UPI0000ECAA73
Length = 99
Score = 103 bits (256), Expect = 1e-20
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L+ E E + R+ C CPYV N+ +K+S K+VDDVLGG A
Sbjct: 1 MLLFCPACGNVLVAE--EGPRCHRFACTTCPYVRNVTRKVSSRKYPRLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC 352
W+NV T CPKC + +AYFM+IQTRS D A F+KC
Sbjct: 59 WENVDSTAEPCPKCEHSRAYFMQIQTRSPDSRANTFYKC 97
[89][TOP]
>UniRef100_B8CB14 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8CB14_THAPS
Length = 113
Score = 102 bits (255), Expect = 1e-20
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELR-----YFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGG 226
+CP +L V S + C CPY I +I K P+ RK+VDD+LGG
Sbjct: 3 FCPLDGTLLQVITATSSASTSPSTNIFACTTCPYSQPITTPQIQKSFPI-RKKVDDILGG 61
Query: 227 EDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
E AW+NV +T A CP CS+ +AYFM++Q RSADEP ++F+KCV+C+H+W +
Sbjct: 62 EKAWENVDRTAAVCPGCSFGEAYFMQMQIRSADEPMSVFYKCVKCSHQWND 112
[90][TOP]
>UniRef100_C5L7A3 DNA-directed RNA polymerase subunit n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5L7A3_9ALVE
Length = 327
Score = 102 bits (255), Expect = 1e-20
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
+ +CPTC N+L+++ + ++Y+C+ CPY++ I +K+++ L K+V+DVLGG DAW
Sbjct: 4 VLFCPTCGNLLVLQAGHDT--MKYWCRTCPYLFPISEKLTQKEIL-HKEVEDVLGGPDAW 60
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K+V +T+A CP C ++AYF ++Q RSADEP T F++CV+ + R
Sbjct: 61 KDVQQTEAVCPADGCDSNRAYFKQMQIRSADEPMTTFYRCVKSQEQTR 108
[91][TOP]
>UniRef100_C5DU35 DNA-directed RNA polymerase subunit n=1 Tax=Zygosaccharomyces
rouxii CBS 732 RepID=C5DU35_ZYGRC
Length = 110
Score = 102 bits (254), Expect = 2e-20
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C NMLL+ ++ S C+ CPY + I+ ++ L RK+VDDVLGG
Sbjct: 1 MLSFCPLCNNMLLIASSD-SGIYTLTCKSCPYEFPIEGIEVYDRKKLPRKEVDDVLGG-- 57
Query: 233 AWKNVAKTDATCP---KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T CP KC+ AYF ++Q RSADEP T FFKCV C +RW+E
Sbjct: 58 GWDNVDQTKVQCPNYDKCAGESAYFFQLQIRSADEPMTTFFKCVNCGNRWKE 109
[92][TOP]
>UniRef100_Q04307 DNA-directed RNA polymerase III subunit RPC10 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC10_YEAST
Length = 110
Score = 102 bits (253), Expect = 3e-20
Identities = 52/112 (46%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP+C NMLL+ + S C+ CPY + I+ +I L RK+VDDVLGG
Sbjct: 1 MLSFCPSCNNMLLITSGD-SGVYTLACRSCPYEFPIEGIEIYDRKKLPRKEVDDVLGG-- 57
Query: 233 AWKNVAKTDATCPK---CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T CP C AYF ++Q RSADEP T F+KCV C HRW+E
Sbjct: 58 GWDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKE 109
[93][TOP]
>UniRef100_C5Y1A6 Putative uncharacterized protein Sb04g032090 n=1 Tax=Sorghum
bicolor RepID=C5Y1A6_SORBI
Length = 166
Score = 101 bits (252), Expect = 3e-20
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +2
Query: 47 RLKMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGG 226
R + + +CP C +L ++ S LR FC CPYV I KI K A L +K+V+ +
Sbjct: 53 RGRAMEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQNKIVKKARLVKKEVEPIFST 112
Query: 227 EDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
D K+ KT TC +C++ +AYF ++Q RSADEP T ++C +C H WRE
Sbjct: 113 ADEMKSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRE 165
[94][TOP]
>UniRef100_UPI000023DFAF hypothetical protein FG08551.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023DFAF
Length = 110
Score = 101 bits (251), Expect = 4e-20
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP CAN+L V LT ++ R C+ CP+ ++I + + R + +DV GG A
Sbjct: 1 MLLFCPHCANILTVSLTS-TRTNRLECRTCPFEHHITEPVFSRRLYERVEREDVFGGPGA 59
Query: 236 WKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W N K A CP C +A F ++Q RSADEP T FFKC+ C HRWRE
Sbjct: 60 WDNAQKGPAQCPADGCDGEEAAFFQVQIRSADEPMTSFFKCMSCGHRWRE 109
[95][TOP]
>UniRef100_Q6EU09 DNA-directed RNA polymerase subunit n=1 Tax=Oryza sativa Japonica
Group RepID=Q6EU09_ORYSJ
Length = 110
Score = 101 bits (251), Expect = 4e-20
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +L ++ LR++C CPYV + KI K A L +K+V+ + DA KN
Sbjct: 3 FCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKNKIVKKARLVKKEVEPIFSDSDAMKN 62
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
KT TCP+C +AY+ ++Q RSADEP + F+KC +C WRE
Sbjct: 63 APKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRE 109
[96][TOP]
>UniRef100_C5DE90 DNA-directed RNA polymerase subunit n=1 Tax=Lachancea
thermotolerans CBS 6340 RepID=C5DE90_LACTC
Length = 127
Score = 101 bits (251), Expect = 4e-20
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Frame = +2
Query: 53 KMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGE 229
KM+++CP C NML++ + S C CPY + I+ ++ L RK+VDDVLGG
Sbjct: 17 KMLSFCPHCHNMLVISQAD-SGAYALQCGACPYAFPIEGVEVYDRKTLPRKEVDDVLGG- 74
Query: 230 DAWKNVAKTDATCP---KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T CP +C +AYF ++Q RSADEP T F+KCV C +RWRE
Sbjct: 75 -GWDNVDQTAVQCPNYDECGGERAYFFQLQIRSADEPMTTFYKCVSCGNRWRE 126
[97][TOP]
>UniRef100_A7TL36 DNA-directed RNA polymerase subunit n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TL36_VANPO
Length = 110
Score = 101 bits (251), Expect = 4e-20
Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGED 232
M+++CP C NMLLV ++ S C+ CPY + I+ +I L RK++DDVLGG
Sbjct: 1 MLSFCPLCNNMLLVATSD-SGIYNLSCRSCPYEFPIENVEIYDRKELERKEIDDVLGG-- 57
Query: 233 AWKNVAKTDATCPK---CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W NV +T CP C+ AYF ++Q RSADEP T F+KCV C +RW+E
Sbjct: 58 GWDNVDQTKVQCPNYDNCAGESAYFFQLQIRSADEPMTTFYKCVNCGNRWKE 109
[98][TOP]
>UniRef100_C5FE71 DNA-directed RNA polymerase subunit n=1 Tax=Microsporum canis CBS
113480 RepID=C5FE71_NANOT
Length = 117
Score = 100 bits (250), Expect = 6e-20
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + R+ C+ CPY Y +D+ + + RK+V DV+G
Sbjct: 3 LTFCPNCSNALTISKAPPTSRYPAGVNRFECRTCPYQYALDRTYYERTEMKRKEVADVMG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G+D WKN A CP C +A+F ++Q RSADEP T F+KC C RWRE
Sbjct: 63 GKDEWKNADSMPAQCPAEGCEGDRAFFYQLQIRSADEPMTTFYKCSVCGTRWRE 116
[99][TOP]
>UniRef100_B6K2W2 DNA-directed RNA polymerase subunit n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K2W2_SCHJY
Length = 109
Score = 100 bits (249), Expect = 7e-20
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTC N L+V + E + C+ CPY + I + A+KQVDDVLGG++AW++
Sbjct: 3 FCPTCGNHLIVSVDENGTNT-FDCRTCPYRFPISILMYHRHEFAQKQVDDVLGGKEAWES 61
Query: 245 VAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+TD C C +AYF ++Q RSADEP + F++C +C ++WRE
Sbjct: 62 NQQTDIPCENKNCDNRRAYFFQLQIRSADEPMSTFYRCTECGYQWRE 108
[100][TOP]
>UniRef100_O13896 DNA-directed RNA polymerase III subunit RPC10 n=1
Tax=Schizosaccharomyces pombe RepID=RPC10_SCHPO
Length = 109
Score = 100 bits (249), Expect = 7e-20
Identities = 45/107 (42%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTC N L+V + E + + C+ CPY + I + A+K+VDDVLGGE+A+++
Sbjct: 3 FCPTCGNHLIVAVDEEGRNA-FDCRTCPYHFPISTFLYSRHEFAQKEVDDVLGGEEAFES 61
Query: 245 VAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+T+ TC KC ++AYF ++Q RSADEP + F++C +C +WRE
Sbjct: 62 NQQTEVTCENTKCDNNRAYFFQLQIRSADEPMSTFYRCTKCKFQWRE 108
[101][TOP]
>UniRef100_B6AHL8 DNA-directed RNA polymerase III subunit RPC10, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AHL8_9CRYT
Length = 106
Score = 100 bits (248), Expect = 1e-19
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+LL+ E + FCQ CP++ ++K+I K+ L K+ ++ G +
Sbjct: 1 MVQFCPHCHNILLIR--EIDERTALFCQTCPFIQKLNKQIVKVTELTPKKPEEAQGDMNE 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ AK A CPKCS +AYF ++Q RSADEP T F+ CV+C H+W+E
Sbjct: 59 IAS-AKVMAVCPKCSNTEAYFFQLQIRSADEPMTSFYTCVKCEHKWKE 105
[102][TOP]
>UniRef100_C1GU30 DNA-directed RNA polymerases III 12.5 kDa polypeptide n=1
Tax=Paracoccidioides brasiliensis Pb01
RepID=C1GU30_PARBA
Length = 128
Score = 99.8 bits (247), Expect = 1e-19
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
I+ CP C+N L + E + R+ C+ CPY Y +D+ + + RK+V DVLG
Sbjct: 14 ISVCPNCSNALTISRAEPTSRYPLGVNRFECRTCPYQYILDRTYYERTEMKRKEVADVLG 73
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G+D WKN CP C +A+F ++Q RSADEP T F KC C RWRE
Sbjct: 74 GKDEWKNADSIGTQCPAEGCDGDRAFFYQLQIRSADEPMTTFLKCTTCGARWRE 127
[103][TOP]
>UniRef100_UPI0001986315 PREDICTED: similar to Os02g0672700 n=1 Tax=Vitis vinifera
RepID=UPI0001986315
Length = 111
Score = 99.4 bits (246), Expect = 2e-19
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGEDAW 238
+CPTC N L EL + R+FC CPYV +I+ K I + L +K+++ + +D
Sbjct: 3 FCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDDM- 61
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
KN TDATCP C++ +A F ++QTRSADEP + F+ C+ C +WRE
Sbjct: 62 KNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRE 110
[104][TOP]
>UniRef100_UPI0001792CC5 PREDICTED: similar to GA17233-PA n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792CC5
Length = 97
Score = 99.4 bits (246), Expect = 2e-19
Identities = 46/107 (42%), Positives = 63/107 (58%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
I +CP C+N+L L EY E+R CQ ++D VLGG++AW
Sbjct: 14 IDFCPNCSNIL--HLDEYLGEMRQKCQ---------------------EIDSVLGGKNAW 50
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+NV D C C++ +AYF+++QTRSADEP T+F+KC C HRWRE
Sbjct: 51 ENVDSIDVVCNSCNHGRAYFLQVQTRSADEPMTVFYKCCNCGHRWRE 97
[105][TOP]
>UniRef100_Q6MUM9 DNA-directed RNA polymerase subunit n=1 Tax=Neurospora crassa
RepID=Q6MUM9_NEUCR
Length = 112
Score = 99.4 bits (246), Expect = 2e-19
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
I +CP CAN+L++ + R C+ CPY + IDK I RK+ +DV GG AW
Sbjct: 3 IVFCPFCANLLILSRADTGGN-RLECRTCPYEHPIDKPIYSRKNFPRKEKEDVFGGPGAW 61
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N K C C+ ++A F ++Q RSADEP T F+KC+ C HRWR+
Sbjct: 62 DNAQKGKVQCDSGTCNGNEAAFFQVQIRSADEPMTTFYKCMTCGHRWRD 110
[106][TOP]
>UniRef100_Q1E154 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1E154_COCIM
Length = 117
Score = 98.6 bits (244), Expect = 3e-19
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + + R+ C+ CPY Y +D+ + + RK+V DV+G
Sbjct: 3 LTFCPNCSNALTISKGPPTSQYPLGVNRFECRTCPYQYVLDRTYFERTEMKRKEVADVMG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G+D WKN CP C +A+F ++Q RSADEP T F KC C RWRE
Sbjct: 63 GKDEWKNADSMATQCPAEGCDGDRAFFYQLQIRSADEPMTTFLKCTTCGARWRE 116
[107][TOP]
>UniRef100_C5P9J4 DNA-directed RNA polymerase III subunit RPC10, putative n=1
Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5P9J4_COCP7
Length = 117
Score = 98.6 bits (244), Expect = 3e-19
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + + R+ C+ CPY Y +D+ + + RK+V DV+G
Sbjct: 3 LTFCPNCSNALTISRGPPTSQYPLGVNRFECRTCPYQYVLDRTYFERTEMKRKEVADVMG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G+D WKN CP C +A+F ++Q RSADEP T F KC C RWRE
Sbjct: 63 GKDEWKNADSMATQCPAEGCDGDRAFFYQLQIRSADEPMTTFLKCTTCGARWRE 116
[108][TOP]
>UniRef100_A2EBM6 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis G3
RepID=A2EBM6_TRIVA
Length = 109
Score = 97.8 bits (242), Expect = 5e-19
Identities = 46/107 (42%), Positives = 66/107 (61%)
Frame = +2
Query: 62 TYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWK 241
++CP C N+LLV+ + +L+ C+ C +V + + APL V ++ +DA
Sbjct: 5 SFCPACGNLLLVDTSGDRTQLK--CRACNFVMGFVGRTVQSAPLNPLDVKALITNDDAMS 62
Query: 242 NVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
KT A C KC +++A+F EIQ RSADEPATLFFKC +C + WREG
Sbjct: 63 FQNKTQARCDKCGHNEAFFTEIQIRSADEPATLFFKCCKCGNTWREG 109
[109][TOP]
>UniRef100_C9SAW1 DNA-directed RNA polymerase III subunit RPC10 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SAW1_9PEZI
Length = 110
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP CAN+L V S R C+ CP+ + I I RK+ +DV GG
Sbjct: 1 MLVFCPNCANILTVSAVG-SVRNRLECRTCPFEHPITAPIYSRREFERKEREDVFGGPGE 59
Query: 236 WKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W N K A CPK C+ +A F ++Q RSADEP T FFKC+ C +RWRE
Sbjct: 60 WDNADKARAQCPKEGCNGDEAAFFQVQIRSADEPMTTFFKCMACGNRWRE 109
[110][TOP]
>UniRef100_B4FDM3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FDM3_MAIZE
Length = 110
Score = 97.4 bits (241), Expect = 6e-19
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +L ++ S LR FC CPYV I KI K A L +K+V+ + D K+
Sbjct: 3 FCPVCGILLQIDPGTGSHRLRLFCPVCPYVCPILNKIVKKARLVKKEVEPISSTADEMKS 62
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
KT TC +C++ +AYF ++Q RSADEP T ++C +C H WRE
Sbjct: 63 APKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRE 109
[111][TOP]
>UniRef100_Q2H571 DNA-directed RNA polymerase subunit n=1 Tax=Chaetomium globosum
RepID=Q2H571_CHAGB
Length = 111
Score = 97.4 bits (241), Expect = 6e-19
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
I +CP CAN+L++ + R C+ CPY + I+ I RK+ +DV GG AW
Sbjct: 3 ILFCPYCANLLILSRMDTGGN-RLECRTCPYQHAIEMPIYSRKNFPRKEKEDVFGGPGAW 61
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N K CP C+ +A F ++Q RSADEP T F+KC+ C HRWRE
Sbjct: 62 DNAQKGRVQCPTPDCNGDEAAFFQVQIRSADEPMTTFYKCMTCGHRWRE 110
[112][TOP]
>UniRef100_UPI000187D2C9 hypothetical protein MPER_04676 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187D2C9
Length = 92
Score = 96.3 bits (238), Expect = 1e-18
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 65 YCPTCANMLLVEL-TEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWK 241
+CPTCAN+L+V T ++K + C CPY + I K+ L RK+VDDVLGG++ WK
Sbjct: 3 FCPTCANLLVVSSETGFNK---WACNTCPYEFPITKQARSSTKLKRKEVDDVLGGDEMWK 59
Query: 242 NVAKTDATCPKCSYHQAYFMEIQTRSADEPAT 337
+ T A+CP+C+ QAYF ++Q RSADEP T
Sbjct: 60 HADSTAASCPRCNNGQAYFYQLQIRSADEPMT 91
[113][TOP]
>UniRef100_Q98TK0 RNA polymerase III smallest subunit (Fragment) n=1 Tax=Platichthys
flesus RepID=Q98TK0_PLAFE
Length = 87
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +2
Query: 83 NMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKTDA 262
N+L+VE E K +R+ C CPYV++I +K++ K+VDDVLGG AW+NV T
Sbjct: 1 NVLIVE--EGQKCMRFACNTCPYVHSITRKVNYRKFPKLKEVDDVLGGAKAWENVDSTPE 58
Query: 263 TCPKCSYHQAYFMEIQTRSADEPATLFFK 349
TCP C + +AYFM+IQTRSADEP T F++
Sbjct: 59 TCPTCGHLRAYFMQIQTRSADEPMTTFYR 87
[114][TOP]
>UniRef100_B9SBZ2 DNA-directed RNA polymerase III, putative n=1 Tax=Ricinus communis
RepID=B9SBZ2_RICCO
Length = 112
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK--KISKMAPLARKQVDDVLGGEDAW 238
+CPTC +L EL + R++C CPYV +I+ KI + L +K+++ V +D
Sbjct: 3 FCPTCGVLLRYELPNMGQSARFYCSTCPYVCSIESRVKIKRKQQLIKKEIEPVFTLDDMM 62
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
K ++T+ATCP C++ +A F +Q RSADEPAT F+ C+ +C+ WRE
Sbjct: 63 KGGSETEATCPHCNFGRARFQSLQIRSADEPATTFYFCLNEKCSRVWRE 111
[115][TOP]
>UniRef100_B9I5C8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I5C8_POPTR
Length = 112
Score = 96.3 bits (238), Expect = 1e-18
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK--KISKMAPLARKQVDDVLGGEDAW 238
+CPTC +L E + R++C CPY +I+ KI + LA+K+++ + ED
Sbjct: 3 FCPTCGMLLRYETPNMGQAARFYCPTCPYFASIESRVKIKRKQKLAKKEIEPIFTLEDMK 62
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
A+TDATCP C++ +A F +IQ RSADEPAT F+ C+ +C WRE
Sbjct: 63 TGGAETDATCPHCNFGRACFQQIQIRSADEPATTFYFCLNEKCGRMWRE 111
[116][TOP]
>UniRef100_A2RAZ1 Complex: hRPC11 is a small n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2RAZ1_ASPNC
Length = 117
Score = 96.3 bits (238), Expect = 1e-18
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + E + R+ C+ CPY Y +D+ + P+ +K+V+DV G
Sbjct: 3 LTFCPNCSNALTISRAEPTTRHPLGVNRFECRTCPYQYALDQSWFEKTPMKQKEVEDVFG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G++ + N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 63 GKEEFANADSMATQCPAEDCNGDRAYFFQLQIRSADEPMTTFLKCTTCGARWRE 116
[117][TOP]
>UniRef100_Q54K02 RNA polymerase III subunit n=1 Tax=Dictyostelium discoideum
RepID=Q54K02_DICDI
Length = 111
Score = 95.9 bits (237), Expect = 2e-18
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVD-DVLGGEDAWK 241
+CP CANMLL++ ++ RYFCQ CPY+++I K+ PL RK +D DV GGE+AWK
Sbjct: 3 FCPLCANMLLIDPD--LQDTRYFCQTCPYIFHIKNKVVTKVPLQRKIIDSDVFGGEEAWK 60
Query: 242 NVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
+ + C C Y +A +EIQ +P T +++C C ++W++
Sbjct: 61 SADVVEVECQVCRYRRASLIEIQVDPIGQPKTSYYRCKNPGCENQWQK 108
[118][TOP]
>UniRef100_B6H1G4 DNA-directed RNA polymerase subunit n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6H1G4_PENCW
Length = 116
Score = 95.9 bits (237), Expect = 2e-18
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVL 220
M+ +CP C+N L + E S R+ C+ CPY ++K + + +K+VDDV
Sbjct: 1 MLVFCPNCSNALTISKAESSTRFPAGVNRFECRVCPYEAPLEKNYFEKKAMKQKEVDDVF 60
Query: 221 GGEDAWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
GG++ + N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 61 GGKEEFANADSVATQCPAESCNGERAYFFQLQIRSADEPMTTFLKCTSCGARWRE 115
[119][TOP]
>UniRef100_Q9ZQC0 DNA-directed RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q9ZQC0_ARATH
Length = 106
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGEDAW 238
+CPTC N+L E S R+FC CPYV NI+++ I K L +K ++ V+ +D
Sbjct: 3 FCPTCGNLLRYEGGGSS---RFFCSTCPYVANIERRVEIKKKQLLVKKSIEPVVTKDDI- 58
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A+T+A CP+C + +AYF +Q RSADEP + F++C++C WRE
Sbjct: 59 PTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWRE 105
[120][TOP]
>UniRef100_B9F1L5 DNA-directed RNA polymerase subunit n=2 Tax=Oryza sativa
RepID=B9F1L5_ORYSJ
Length = 106
Score = 94.7 bits (234), Expect = 4e-18
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +L ++ LR++C CPYV I KK A L +K+V+ + DA KN
Sbjct: 3 FCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPIVKK----ARLVKKEVEPIFSDSDAMKN 58
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
KT TCP+C +AY+ ++Q RSADEP + F+KC +C WRE
Sbjct: 59 APKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRE 105
[121][TOP]
>UniRef100_C7YMJ1 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YMJ1_NECH7
Length = 126
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
+ CP CAN+L V T ++ R C+ CP+ ++I + + R + +DV GG AW
Sbjct: 18 LAVCPHCANILTVSFTN-TRTNRLECRTCPFEHHITEPVFSRRMYERVEKEDVFGGPGAW 76
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N K CP C+ +A F ++Q RSADEP T F+KC+ C HRWRE
Sbjct: 77 DNAQKGRVQCPNDGCNGDEAAFFQVQIRSADEPMTSFYKCMTCGHRWRE 125
[122][TOP]
>UniRef100_UPI000187D4AA hypothetical protein MPER_05318 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187D4AA
Length = 70
Score = 94.0 bits (232), Expect = 7e-18
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +2
Query: 191 LARKQVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHR 370
L RK+VDDVLGGE+ WK+ T A+CPKC+ QAYF ++Q RSADEP T F++C CAH+
Sbjct: 7 LKRKEVDDVLGGEEMWKHADSTAASCPKCNNGQAYFYQLQIRSADEPMTTFYRCTACAHQ 66
Query: 371 WRE 379
WRE
Sbjct: 67 WRE 69
[123][TOP]
>UniRef100_UPI0000E8102D PREDICTED: hypothetical protein n=1 Tax=Gallus gallus
RepID=UPI0000E8102D
Length = 98
Score = 92.4 bits (228), Expect = 2e-17
Identities = 43/90 (47%), Positives = 58/90 (64%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N+L+ E E + R+ C CPYV N+ +K+S K+VDDVLGG A
Sbjct: 1 MLLFCPACGNVLVAE--EGPRCHRFACTTCPYVRNVTRKVSSRKYPRLKEVDDVLGGAAA 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSAD 325
W+NV T CPKC + +AYFM+IQTRS +
Sbjct: 59 WENVDSTAEPCPKCEHSRAYFMQIQTRSPE 88
[124][TOP]
>UniRef100_B0XPK1 RNA polymerase III subunit C11, putative n=2 Tax=Aspergillus
fumigatus RepID=B0XPK1_ASPFC
Length = 116
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVL 220
M+T+CP C N L + E ++E R+ C+ CPY + + + + +K+V+DV
Sbjct: 1 MLTFCPNCGNSLTISRGEPTREYPLGVNRFECRTCPYQHLLKHGRQEKTTMKQKEVEDVF 60
Query: 221 GGEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
GG++ + N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 61 GGKEEFANADSMATQCPAEDCNGDRAYFFQLQIRSADEPMTTFLKCTTCGARWRE 115
[125][TOP]
>UniRef100_A1CR48 RNA polymerase III subunit C11, putative n=1 Tax=Aspergillus
clavatus RepID=A1CR48_ASPCL
Length = 116
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVL 220
M+T+CP C N L + E +++ R+ C+ CPY + + + + +K+V+DVL
Sbjct: 1 MLTFCPNCGNSLTISRGEPTRDYPLGVNRFECRTCPYQHILKNGRQEKTIMKQKEVEDVL 60
Query: 221 GGEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
GG++ + N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 61 GGKEEFANADSMATQCPAEDCNGDRAYFFQLQIRSADEPMTTFLKCTTCGARWRE 115
[126][TOP]
>UniRef100_Q8LE40 DNA-directed RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q8LE40_ARATH
Length = 106
Score = 91.7 bits (226), Expect = 3e-17
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGEDAW 238
+CPTC N+L E S R+FC CPYV I+++ I K L +K ++ V+ +D
Sbjct: 3 FCPTCGNLLRYEGGGSS---RFFCSTCPYVAYIERRVEIKKKQLLVKKSIEPVVTKDDI- 58
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A+T+A CP+C + +AYF +Q RSADEP + F++C++C WRE
Sbjct: 59 PTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWRE 105
[127][TOP]
>UniRef100_B8NLF0 DNA-directed RNA polymerase subunit n=2 Tax=Aspergillus
RepID=B8NLF0_ASPFN
Length = 117
Score = 91.7 bits (226), Expect = 3e-17
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + + R+ C+ CPY Y +++ + + +K+V+DV G
Sbjct: 3 LTFCPNCSNALTISRADPTPRHPLGVNRFECRTCPYQYVLEQSYFEKTEMKQKEVEDVFG 62
Query: 224 GEDAWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
G++ + N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 63 GKEEFANADSMATQCPAENCNGDRAYFFQLQIRSADEPMTTFLKCTSCGARWRE 116
[128][TOP]
>UniRef100_A5KBL4 Transcription factor, putative n=1 Tax=Plasmodium vivax
RepID=A5KBL4_PLAVI
Length = 106
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI---------SKMAPLARKQV 208
M +CP C N++LV + + ++C+ C + Y I KI +K PL V
Sbjct: 1 MAFFCPNCHNIVLVHV---ENGVYFYCKTCNFKYKIRNKIFNKFDCKEYNKTIPLDAVDV 57
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ KN++KT A CPKC++ +AYF +Q RSADEP+TLF+ CV+C H W+E
Sbjct: 58 NN--------KNMSKTQAVCPKCTHDEAYFYSLQIRSADEPSTLFYICVKCNHHWKE 106
[129][TOP]
>UniRef100_Q9LNK0 DNA-directed RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q9LNK0_ARATH
Length = 106
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGEDAW 238
+CPTC N+L E S R+FC CPYV I ++ I K L +K ++ V+ +D
Sbjct: 3 FCPTCGNLLRYEGGGNS---RFFCSTCPYVAYIQRQVEIKKKQLLVKKSIEAVVTKDDI- 58
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A+T+A CP+C + +AYF +Q RSADEP + F++C++C WRE
Sbjct: 59 PTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWRE 105
[130][TOP]
>UniRef100_Q6FRH9 DNA-directed RNA polymerase subunit n=1 Tax=Candida glabrata
RepID=Q6FRH9_CANGA
Length = 100
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 134 CQCCPYVYNIDK-KISKMAPLARKQVDDVLGGEDAWKNVAKTDATCPK---CSYHQAYFM 301
C+ CPY + I+ +I L RK+VDDVLGG W NV +T CP C AYF
Sbjct: 16 CRSCPYEFPIESIEIYDRKKLPRKEVDDVLGG--GWDNVDQTKVQCPNYDTCGGESAYFF 73
Query: 302 EIQTRSADEPATLFFKCVQCAHRWRE 379
++Q RSADEP T F+KCV CAHRW+E
Sbjct: 74 QLQIRSADEPMTTFYKCVNCAHRWKE 99
[131][TOP]
>UniRef100_C1G1F3 Putative uncharacterized protein n=1 Tax=Paracoccidioides
brasiliensis Pb18 RepID=C1G1F3_PARBD
Length = 137
Score = 90.1 bits (222), Expect = 1e-16
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +2
Query: 125 RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKTDATCPK--CSYHQAYF 298
R+ C+ CPY Y +D+ + + RK+V DVLGG+D WKN CP C +A+F
Sbjct: 50 RFECRTCPYQYILDRTYYERTEMKRKEVADVLGGKDEWKNADSIGTQCPAEGCDGDRAFF 109
Query: 299 MEIQTRSADEPATLFFKCVQCAHRWRE 379
++Q RSADEP T F KC C RWRE
Sbjct: 110 YQLQIRSADEPMTTFLKCTTCGARWRE 136
[132][TOP]
>UniRef100_C4V7E3 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4V7E3_NOSCE
Length = 105
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C N+L ++ + + + + C CPY Y I+ +K A VD VLG ED +K
Sbjct: 3 FCPLCTNILAID--KLNIQTAFICNTCPYQYKINMVFNKSARNNVIAVDKVLG-EDEYKY 59
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ + C KC ++A FME+QTRSADEP T+F++CV C W+E
Sbjct: 60 ASTCEKKCIKCDSNKALFMELQTRSADEPMTIFYECVLCKTNWKE 104
[133][TOP]
>UniRef100_O96159 Transcription factor, putative n=1 Tax=Plasmodium falciparum 3D7
RepID=O96159_PLAF7
Length = 106
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI---------SKMAPLARKQV 208
M +CP C N++LV + K + ++C+ C Y Y I KI +K PL +
Sbjct: 1 MAFFCPNCHNIVLVHI---EKGVYFYCKSCNYKYKIKNKIYNKFDCQQFNKTIPLDAVDI 57
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ KN++KT A CPKC+ +AYF +Q RSADEP+T+F+ CV+C + W+E
Sbjct: 58 NN--------KNMSKTQAVCPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE 106
[134][TOP]
>UniRef100_B3L0T6 Transcription factor, putative n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L0T6_PLAKH
Length = 106
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI---------SKMAPLARKQV 208
M +CP C N++LV + + ++C+ C + Y I KI +K PL +
Sbjct: 1 MAFFCPNCHNIVLVNI---ENGVYFYCKTCNFKYKIKNKIFNKFDCRDLNKTIPLDAVDM 57
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ KN++KT A CPKC++ +AYF +Q RSADEP+TLF+ C++C H W+E
Sbjct: 58 NN--------KNMSKTQAVCPKCTHDEAYFYSMQIRSADEPSTLFYICIKCNHHWKE 106
[135][TOP]
>UniRef100_B2ATA0 DNA-directed RNA polymerase subunit n=1 Tax=Podospora anserina
RepID=B2ATA0_PODAN
Length = 111
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
I +CP CANML++ + R C+ CPY + I+K + + +D+ GG DAW
Sbjct: 3 ILFCPYCANMLILSRMDTGGN-RVECRTCPYQHAIEKPYYSRKVFPKVEKEDLFGGPDAW 61
Query: 239 KNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N K C +CS +A F ++Q RSADEP T F++C+ C WRE
Sbjct: 62 ANAQKQKVQCSSAECSGGEAAFFQVQIRSADEPMTTFYRCLTCGKNWRE 110
[136][TOP]
>UniRef100_C5JU87 DNA-directed RNA polymerase subunit n=1 Tax=Ajellomyces
dermatitidis SLH14081 RepID=C5JU87_AJEDS
Length = 111
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + + R+ C+ CPY Y +D+ + + RK+V DVLG
Sbjct: 3 LTFCPNCSNALTISRADPTPRYPLGVNRFECRTCPYQYVLDRTYYERTEMKRKEVADVLG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFK 349
G+D WKN CP C +AYF ++Q RSADEP T FFK
Sbjct: 63 GKDEWKNADSQGTQCPAEGCDGDRAYFYQLQIRSADEPMTTFFK 106
[137][TOP]
>UniRef100_B5X7W8 DNA-directed RNA polymerase III subunit RPC10 n=1 Tax=Salmo salar
RepID=B5X7W8_SALSA
Length = 93
Score = 87.8 bits (216), Expect = 5e-16
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = +2
Query: 200 KQVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRW 373
K+VDDVLGG AW+NV T CPKC + +A+FM+IQTRSADEP T F+KC +C HRW
Sbjct: 32 KEVDDVLGGAAAWENVDSTPEKCPKCEHPRAFFMQIQTRSADEPMTTFYKCCNYECGHRW 91
Query: 374 RE 379
R+
Sbjct: 92 RD 93
[138][TOP]
>UniRef100_B8M829 RNA polymerase III subunit C11, putative n=1 Tax=Talaromyces
stipitatus ATCC 10500 RepID=B8M829_TALSN
Length = 116
Score = 87.8 bits (216), Expect = 5e-16
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L V E S R+ C+ CPY + ID+ + L +K+V+ V
Sbjct: 3 LTFCPHCSNALTVSRAEPSTTYPMGVNRFQCRTCPYQFVIDRLYVEEKVLKQKEVEVVFN 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
E+ +KN K CP C+ AYF ++Q RSADEP T F +C CA WR+
Sbjct: 63 DEEMFKNADKLPVQCPSDTCNGEYAYFYQLQIRSADEPMTTFLRCTTCAKTWRD 116
[139][TOP]
>UniRef100_C0S3L8 DNA-directed RNA polymerase subunit n=1 Tax=Paracoccidioides
brasiliensis Pb03 RepID=C0S3L8_PARBP
Length = 134
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + +E + R+ C+ CPY Y +D+ + + RK+V DVLG
Sbjct: 3 LTFCPNCSNALTISRSEPTSRYPLGVNRFECRTCPYQYILDRTYYERTEMKRKEVADVLG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFK 349
G+D WKN CP C +A+F ++Q RSADEP T F K
Sbjct: 63 GKDEWKNADSIGTQCPAEGCDGDRAFFYQLQIRSADEPMTTFLK 106
[140][TOP]
>UniRef100_B6Q634 RNA polymerase III subunit C11, putative n=1 Tax=Penicillium
marneffei ATCC 18224 RepID=B6Q634_PENMQ
Length = 116
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L V + S R+ C+ CPY + ID+ + L +K+V+ V
Sbjct: 3 LTFCPHCSNALTVSRADPSTAYPMGVNRFQCRTCPYQFVIDRLYVEEKVLKQKEVEVVFN 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
E+ +KN K CP C+ AYF ++Q RSADEP T F +C CA WR+
Sbjct: 63 DEEMFKNADKLPVQCPSDTCNGEYAYFYQLQIRSADEPMTTFLRCTTCAKTWRD 116
[141][TOP]
>UniRef100_A9UWA6 DNA-directed RNA polymerase subunit n=1 Tax=Monosiga brevicollis
RepID=A9UWA6_MONBE
Length = 109
Score = 86.3 bits (212), Expect = 1e-15
Identities = 38/110 (34%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYF--CQCCPYVYNIDKK--ISKMAPLARKQVDDVLGGED 232
+CP C NML+++ + + YF C CPY + + + ++ + ++ D++ GG+
Sbjct: 3 FCPLCGNMLIMQSSLHG----YFFGCNTCPYKHELGEHRVTARRSMHHDERADEIYGGDS 58
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWREG 382
A + + T+A CPKC +++A +++ QTRSADEP+T+F+ C +C H+W +G
Sbjct: 59 AKEMMDMTEADCPKCHHNRASYVQQQTRSADEPSTVFYCCEKCNHKWNDG 108
[142][TOP]
>UniRef100_A1D3Y9 RNA polymerase III subunit C11, putative (Fragment) n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1D3Y9_NEOFI
Length = 116
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Frame = +2
Query: 68 CPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGED 232
CP C N L + E ++E R+ C+ CPY + + + + +K+V+DV GG++
Sbjct: 5 CPNCGNSLTISRGEPTREYPLGVNRFECRTCPYQHLLKHGRQEKTTMKQKEVEDVFGGKE 64
Query: 233 AWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ N CP C+ +AYF ++Q RSADEP T F KC C RWRE
Sbjct: 65 EFANADSMATQCPAEDCNGDRAYFFQLQIRSADEPMTTFLKCTTCGARWRE 115
[143][TOP]
>UniRef100_Q9Y1T9 Transcription factor IIS homolog (Fragment) n=1 Tax=Giardia
intestinalis RepID=Q9Y1T9_GIALA
Length = 70
Score = 85.1 bits (209), Expect = 3e-15
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2
Query: 173 ISKMAPLARKQVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC 352
IS+ L RK VD VLGGE AW+ KT CP C++ A+++++Q RS+DEP + F++C
Sbjct: 1 ISRSLTLTRKSVDPVLGGETAWQGADKTQNPCPVCAFPDAFWIQMQIRSSDEPMSRFYRC 60
Query: 353 VQCAHRWRE 379
QCAH+WRE
Sbjct: 61 CQCAHQWRE 69
[144][TOP]
>UniRef100_Q4YPC3 Transcription factor, putative n=1 Tax=Plasmodium berghei
RepID=Q4YPC3_PLABE
Length = 106
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI---------SKMAPLARKQV 208
M +CP C N++LV + + +C+ C + Y I KI +K PL +
Sbjct: 1 MAFFCPNCHNIVLVHV---ENGVYLYCKTCNFKYKIKNKIYNKYDCKEFNKTIPLDAVDM 57
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ KN++KT A CPKC++ +AYF +Q RSADEP+TLF+ CV C + W+E
Sbjct: 58 NN--------KNMSKTQAICPKCTHDEAYFYSLQIRSADEPSTLFYICVNCNYHWKE 106
[145][TOP]
>UniRef100_Q4Y0E1 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4Y0E1_PLACH
Length = 106
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI---------SKMAPLARKQV 208
M +CP C N++LV + + +C+ C + Y I KI +K PL +
Sbjct: 1 MAFFCPNCHNIVLVHV---ENGVYLYCKTCNFKYKIKNKIYNKYDCTEFNKTIPLDAVDM 57
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ KN++KT A CPKC++ +AYF +Q RSADEP+TLF+ CV C + W+E
Sbjct: 58 NN--------KNMSKTQAICPKCTHDEAYFYSLQIRSADEPSTLFYICVNCNYHWKE 106
[146][TOP]
>UniRef100_Q15ES4 DNA-directed RNA polymerase , putative n=1 Tax=Schistosoma mansoni
RepID=Q15ES4_SCHMA
Length = 115
Score = 85.1 bits (209), Expect = 3e-15
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI-----SKMAPLARKQVDDVLG 223
+ +CP C ++L++E + + L C Y + + + + + R + D V
Sbjct: 3 VLFCPLCHSLLMIEESAHCYSLNCSAPICSYRWFVTQPLVLEHKPRQDVRLRLEEDAVFS 62
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
ED + + A+TD CPKCS+ +AYF+++QTRSADEP+T+ + C++C H W E
Sbjct: 63 VEDEYSSSAQTDEKCPKCSHTRAYFVQMQTRSADEPSTIKYSCIKCHHIWTE 114
[147][TOP]
>UniRef100_A7EJA6 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7EJA6_SCLS1
Length = 123
Score = 83.6 bits (205), Expect = 9e-15
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKEL------------RYFCQCCPYVYNIDKKISKMAPLAR 199
M+ +CP+C+N+L V +T +S R C CPY Y + + I R
Sbjct: 1 MLLFCPSCSNILTVSVTPHSSTPTPTSTQDLSGANRLECLTCPYQYILTRSIYDRKTFVR 60
Query: 200 KQVDDVLGGEDAWKNVAKTDATCP--KCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRW 373
++ +DV GG+DAW N C +C+ A +Q RSADEP T F++C+ CA++W
Sbjct: 61 EEKEDVFGGKDAWANADTYPKQCANSECNGMVAAARFVQIRSADEPMTGFYRCMTCANQW 120
Query: 374 RE 379
RE
Sbjct: 121 RE 122
[148][TOP]
>UniRef100_A2BN99 DNA-directed RNA polymerase subunit M n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=A2BN99_HYPBU
Length = 114
Score = 83.6 bits (205), Expect = 9e-15
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD-------VLG 223
+CP C +++ + T + + C C Y + + + RK++ V+
Sbjct: 3 FCPRCGSLMTLRRT--NDRTVWVCPSCGYTEELSQASEAQLAVLRKEIKHSEKERIVVVD 60
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
WK + KT A CP+C YH+AY +QTR ADEP T FFKCV C + WRE
Sbjct: 61 PNVNWKAMPKTKAVCPRCGYHEAYVWVVQTRRADEPPTRFFKCVSCGYVWRE 112
[149][TOP]
>UniRef100_A8Q173 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q173_MALGO
Length = 68
Score = 83.2 bits (204), Expect = 1e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +2
Query: 191 LARKQVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFK 349
L RKQVDDV+GGED+WKNV TDATCPKC +AYFM++Q RSADEP+T +
Sbjct: 3 LERKQVDDVMGGEDSWKNVDSTDATCPKCDNGRAYFMQLQIRSADEPSTFLIR 55
[150][TOP]
>UniRef100_UPI000155C09B PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus
anatinus RepID=UPI000155C09B
Length = 68
Score = 82.8 bits (203), Expect = 2e-14
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +2
Query: 200 KQVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRW 373
K+VDDVLGG AW+NV T + PKC + +AYFM+IQTRSADEP T F+KC VQC HRW
Sbjct: 10 KEVDDVLGGAAAWENVDST-SRAPKCEHPRAYFMQIQTRSADEPMTTFYKCCNVQCGHRW 68
[151][TOP]
>UniRef100_Q8SSB3 DNA-DIRECTED RNA POLYMERASE III 12.5kDa SUBUNIT n=1
Tax=Encephalitozoon cuniculi RepID=Q8SSB3_ENCCU
Length = 104
Score = 82.8 bits (203), Expect = 2e-14
Identities = 38/105 (36%), Positives = 64/105 (60%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C++ML+V+ EL C+ C Y+Y I ++IS+ + K+ + + +++ K
Sbjct: 3 FCPLCSSMLVVKKQAIGNELS--CKMCGYLYAISEEISRTVGMTPKKSEGFVDEDESLKF 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V K C +C + F+E+QTRSADEP T+F+KC++C W+E
Sbjct: 61 VTKCGKRC-ECGSEEVSFVELQTRSADEPMTIFYKCIRCKKVWKE 104
[152][TOP]
>UniRef100_Q5DC18 SJCHGC03725 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DC18_SCHJA
Length = 115
Score = 82.0 bits (201), Expect = 3e-14
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI-----SKMAPLARKQVDDVLG 223
+ +CP C ++L++E + + L C Y + + + + + R + D V
Sbjct: 3 VLFCPNCHSLLMIEESAHCYSLNCSAPMCSYRWFVTQPLVLEHKPRQDIRLRLEEDAVFS 62
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
ED + + A+ D CPKCS+ +AYF+++QTRSADEP+T+ + C++C H W E
Sbjct: 63 VEDEYSSSAQIDEKCPKCSHTRAYFVQMQTRSADEPSTIKYSCMKCHHIWTE 114
[153][TOP]
>UniRef100_Q7SF80 DNA-directed RNA polymerase subunit n=1 Tax=Neurospora crassa
RepID=Q7SF80_NEUCR
Length = 111
Score = 80.5 bits (197), Expect = 8e-14
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
I +CP CAN+L++ + R C+ CPY + IDK I RK+ +DV GG AW
Sbjct: 3 IVFCPFCANLLILSRADTGGN-RLECRTCPYEHPIDKPIYSRKNFPRKEKEDVFGGPGAW 61
Query: 239 KNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFK 349
N K C C+ ++A F ++Q RSADEP T F+K
Sbjct: 62 DNAQKGKVQCDSGTCNGNEAAFFQVQIRSADEPMTTFYK 100
[154][TOP]
>UniRef100_Q4TTY9 DNA-dependent RNA polymerase subunit M n=1 Tax=Thermococcus
thioreducens RepID=Q4TTY9_9EURY
Length = 110
Score = 79.0 bits (193), Expect = 2e-13
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD-----VLGGE 229
+CP C N++L + K+ + C+ C Y D+K + + +++V+ ++ E
Sbjct: 3 FCPKCGNLMLPD----RKKKVWVCRSCGYEEPFDEKKDREKTVIKQKVEHKPDEGIIVVE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K + T TCPKC AY+ E+QTR+ DEP+T+F++C +C H WR
Sbjct: 59 QDVKTLPTTKITCPKCGNDTAYWWEMQTRAGDEPSTIFYRCTKCGHTWR 107
[155][TOP]
>UniRef100_C5G9Y2 DNA-directed RNA polymerase III polypeptide n=1 Tax=Ajellomyces
dermatitidis ER-3 RepID=C5G9Y2_AJEDR
Length = 143
Score = 78.2 bits (191), Expect = 4e-13
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 125 RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKTDATCPK--CSYHQAYF 298
R+ C+ CPY Y +D+ + + RK+V DVLGG+D WKN CP C +AYF
Sbjct: 24 RFECRTCPYQYVLDRTYYERTEMKRKEVADVLGGKDEWKNADSQGTQCPAEGCDGDRAYF 83
Query: 299 MEIQTRSADEPATLFFK 349
++Q RSADEP T FFK
Sbjct: 84 YQLQIRSADEPMTTFFK 100
[156][TOP]
>UniRef100_Q9UYX7 Tfs archaeal transcription factor S n=1 Tax=Pyrococcus abyssi
RepID=Q9UYX7_PYRAB
Length = 110
Score = 78.2 bits (191), Expect = 4e-13
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNID----KKISKMAPLARKQVDDVLG 223
M+ +CP C ++++ + K + C+ C Y I+ K + + K + V+
Sbjct: 1 MVKFCPKCGSIMIPD----KKRGVFVCRRCGYEEPINPEDAKAYKRTEEVKHKPDEGVIV 56
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
E + + TCPKC YH+A++ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 57 VEQDFSTLPTAKVTCPKCGYHEAWYWELQTRAGDEPSTIFYKCKRCGYVWR 107
[157][TOP]
>UniRef100_O58397 110aa long hypothetical transcription-associated protein n=1
Tax=Pyrococcus horikoshii RepID=O58397_PYRHO
Length = 110
Score = 78.2 bits (191), Expect = 4e-13
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNID----KKISKMAPLARKQVDDVLG 223
M+ +CP C ++++ + K + C+ C Y I+ K + + K + V+
Sbjct: 1 MVKFCPRCGSIMIPD----KKRGVFVCRKCGYEEPINPEDAKAYRRTEEIKHKPDEGVIV 56
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
E + + TCPKC YH+A++ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 57 IEQDFSTLPTAKVTCPKCGYHEAWYWEVQTRAGDEPSTIFYKCKRCGYVWR 107
[158][TOP]
>UniRef100_Q56254 DNA-directed RNA polymerase subunit M n=1 Tax=Thermococcus celer
RepID=RPOM_THECE
Length = 110
Score = 78.2 bits (191), Expect = 4e-13
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQV-----DDVLGGE 229
+CP C N++L + K + C+ C Y D++ + + +++V + ++ E
Sbjct: 3 FCPKCGNLMLPD----RKRKVWVCRSCGYEEPFDEEKDREKTVIKQEVKHKPDEGIVVIE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K + T TCPKC AY+ E+QTR+ DEP+T+F+KC +C H WR
Sbjct: 59 QDLKTLPTTKITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 107
[159][TOP]
>UniRef100_B5IU63 Transcription factor S n=1 Tax=Thermococcus barophilus MP
RepID=B5IU63_9EURY
Length = 109
Score = 77.8 bits (190), Expect = 5e-13
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK---QVDDVLGG 226
M+ +CP C +++L + K + C+ C Y ++ + +K L +K +V+D+
Sbjct: 1 MVKFCPKCGSIMLPD----RKREVFVCRKCGYEEPLNPEAAKAYRLTQKVEHKVEDIPII 56
Query: 227 EDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
E + K TCPKC +AY+ E+QTR+ DEP+T+F++C +C + WR
Sbjct: 57 EQDLATLPKVKITCPKCGNDEAYWWELQTRAGDEPSTIFYRCTKCGYTWR 106
[160][TOP]
>UniRef100_Q4U9E5 RNA polymerase small subunit, putative n=1 Tax=Theileria annulata
RepID=Q4U9E5_THEAN
Length = 108
Score = 77.4 bits (189), Expect = 7e-13
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLAR-KQVDDVLGGED 232
M +CP C ++L E EY+ + C C Y + K K K+ L +
Sbjct: 1 MSLFCPLCHSILYFESKEYNNS-SFSCLRCSYNLPVTKNYYKETVCTNVKEAGKTLFEAN 59
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+++ + A CP C+ +AYFM IQTRSADEP T FF C C RW+E
Sbjct: 60 EFQHAPRIPAVCPSCNNKEAYFMSIQTRSADEPMTQFFVCTGCLKRWKE 108
[161][TOP]
>UniRef100_Q5JF34 Archaeal transcription factor S n=1 Tax=Thermococcus kodakarensis
RepID=Q5JF34_PYRKO
Length = 110
Score = 77.0 bits (188), Expect = 9e-13
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVD-----DVLGGE 229
+CP C N++L + K + C+ C Y D++ + K+V+ +++ E
Sbjct: 3 FCPKCGNLMLPD----RKRKVWVCRSCGYEEPFDEEKDREKTKITKKVEHKPDEEIIVVE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K + T TCPKC AY+ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 59 QDLKTLPTTKVTCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGYTWR 107
[162][TOP]
>UniRef100_C8V4B3 RNA polymerase III subunit C11, putative (AFU_orthologue;
AFUA_1G06380) n=2 Tax=Emericella nidulans
RepID=C8V4B3_EMENI
Length = 108
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + S + R+ C+ CPY Y +++ + P+ +K+V+ V G
Sbjct: 3 LTFCPNCSNALTISRADPSPKYPLGINRFECRTCPYQYALEQAWFEKTPMKQKEVEAVFG 62
Query: 224 GEDAWKNVAKTDATCPK--CSYHQAYFMEIQTRSADEPATLFFK 349
G+ ++N CP C+ +AYF ++Q RSADEP T F K
Sbjct: 63 GKAEFENADSMATQCPAEGCNGDRAYFFQLQIRSADEPMTTFLK 106
[163][TOP]
>UniRef100_Q4N244 Putative uncharacterized protein n=1 Tax=Theileria parva
RepID=Q4N244_THEPA
Length = 108
Score = 75.1 bits (183), Expect = 3e-12
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLAR-KQVDDVLGGED 232
M +CP C ++L E +K + C C Y + K K K+ L +
Sbjct: 1 MSLFCPLCHSILYFEQKPENKS-SFSCLRCTYNLPVTKDYHKETVCTNVKEAGKTLFEAN 59
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+K+ + A CP C+ +AYFM IQTRSADEP T FF C C RW+E
Sbjct: 60 EFKHAPRIPAVCPACNNKEAYFMSIQTRSADEPMTQFFVCTACLKRWKE 108
[164][TOP]
>UniRef100_B6YVY9 DNA-directed RNA polymerase subunit M n=1 Tax=Thermococcus
onnurineus NA1 RepID=B6YVY9_THEON
Length = 110
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD-----VLGGE 229
+CP C N++L + K + C+ C Y D++ + ++V+ ++ E
Sbjct: 3 FCPECGNLMLPD----RKRKVWVCRKCGYEEPFDEEKDREKTRITQKVEHKPDEGIIVVE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
+ K TCPKC +AY+ E+QTR+ DEP+T+F+KC +C H WR
Sbjct: 59 QDLATLPKVKITCPKCGNDEAYWWELQTRAGDEPSTIFYKCTKCGHVWR 107
[165][TOP]
>UniRef100_A7ASV0 Transcription factor S-II protein, putative n=1 Tax=Babesia bovis
RepID=A7ASV0_BABBO
Length = 109
Score = 73.9 bits (180), Expect = 7e-12
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLAR--KQVDDVLGGE 229
M +CP C ++L + + C C Y I ++ K + K++
Sbjct: 1 MALFCPLCHSVLFFSCNP-PQTSTFSCMRCVYELPISRRYHKSTVYTQFEKEIPRSPHSV 59
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ +++ K A CP C +AYFM IQTRSADEP T FF C C HRW+E
Sbjct: 60 NEFEHAPKIIAVCPSCHNKEAYFMSIQTRSADEPMTQFFVCTACRHRWKE 109
[166][TOP]
>UniRef100_C5A5N8 Transcription elongation factor S (TFS_arch) n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=C5A5N8_THEGJ
Length = 110
Score = 73.9 bits (180), Expect = 7e-12
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD-----VLGGE 229
+CP C N++L + K + C+ C Y D++ + ++V+ ++ E
Sbjct: 3 FCPKCGNLMLPD----RKRKVWVCRSCGYEEPFDEEKDREKTRITQKVEHKPDEGIIVVE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K + T TCPKC AY+ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 59 QDLKTLPTTKVTCPKCGNDTAYWWELQTRAGDEPSTIFYKCTKCGYVWR 107
[167][TOP]
>UniRef100_B7R0T6 Transcription factor S n=1 Tax=Thermococcus sp. AM4
RepID=B7R0T6_9EURY
Length = 110
Score = 73.6 bits (179), Expect = 1e-11
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD-----VLGGE 229
+CP C N++L + K + C+ C Y D++ + ++V+ ++ E
Sbjct: 3 FCPKCGNLMLPD----RKRKVWVCRSCGYEEPFDEEKDREKTRITQKVEHRPDEGIIVVE 58
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K + T TCPKC AY+ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 59 QDVKTLPTTKVTCPKCGNDTAYWWELQTRAGDEPSTIFYKCTKCGYVWR 107
[168][TOP]
>UniRef100_C6A1Y3 DNA-directed RNA polymerase subunit m n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A1Y3_THESM
Length = 108
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK---QVDDVLGGEDA 235
+CP C N++L + K + C+ C Y +D + + + +K +D+ E
Sbjct: 3 FCPKCGNIMLPD----KKRGVFVCRKCGYEEPLDLETASKYKITQKIKHDREDIPVIEQD 58
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
+ K TCPKC +AY+ E+QTR+ DEP+T+F++C +C + WR
Sbjct: 59 VATLPKVKITCPKCGNDEAYWWELQTRAGDEPSTIFYRCTKCGYTWR 105
[169][TOP]
>UniRef100_B1L5R4 DNA-directed RNA polymerase, subunit M n=1 Tax=Candidatus
Korarchaeum cryptofilum OPF8 RepID=B1L5R4_KORCO
Length = 108
Score = 72.4 bits (176), Expect = 2e-11
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK-ISKMAPLARKQVDDVLGGEDAWK 241
+CP C +L + + K L Y+C C Y K S++ + DV+ E++ K
Sbjct: 2 FCPKCGTLLRPK--KAGKRLIYYCPSCGYESESPPKGNSQVITKVTSESGDVIIEEESEK 59
Query: 242 NVAKT-DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A +A CPKC +AYF +QTR+ADEP T +KC +C + WRE
Sbjct: 60 ISAPVVEARCPKCGNDKAYFQIVQTRAADEPPTRIYKCTKCGYSWRE 106
[170][TOP]
>UniRef100_C7P7U4 Transcription termination factor Tfs n=1 Tax=Methanocaldococcus
fervens AG86 RepID=C7P7U4_METFA
Length = 108
Score = 71.6 bits (174), Expect = 4e-11
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLA-----RKQVDDVL 220
M+ +CP C N++L K+ + C C Y + SK RK+ V+
Sbjct: 1 MVKFCPKCKNLML------PKDGKLKCVVCGYEEETGSEGSKEYEYKEHLENRKEKITVI 54
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
GE + + T CPKC +++AY+ QTR ADEP T F+KC +C H WRE
Sbjct: 55 EGEGV-ETLPTTRVECPKCGHNEAYWWLQQTRCADEPETRFYKCKKCGHTWRE 106
[171][TOP]
>UniRef100_UPI0000E47A79 PREDICTED: similar to POLR3K, partial n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E47A79
Length = 65
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CPTCAN+L+VE E K LR+ C CPYV+N+ +K++ K+VDDVLGG AW+N
Sbjct: 3 FCPTCANVLVVE--EGPKCLRFACNTCPYVHNVTRKLANRKYPRLKEVDDVLGGAAAWEN 60
Query: 245 VAKT 256
V T
Sbjct: 61 VDST 64
[172][TOP]
>UniRef100_C9RF97 Transcription termination factor Tfs n=1 Tax=Methanocaldococcus
vulcanius M7 RepID=C9RF97_9EURY
Length = 107
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPY---VYNIDKKISKMAPLARKQVDDVLGG 226
M+ +CP C N++L K+ + C C Y + + L K+ + +
Sbjct: 1 MVKFCPKCKNLML------PKDGKLKCAVCGYEEETAEVSNEYEYKEHLEPKKKEITVIE 54
Query: 227 EDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++ + + T CPKC + +AY+ QTR ADEP T F+KC +C H WRE
Sbjct: 55 DEGLETLPTTRIECPKCGHTEAYWWLQQTRCADEPETRFYKCKKCGHTWRE 105
[173][TOP]
>UniRef100_C5U6A7 Transcription termination factor Tfs n=1 Tax=Methanocaldococcus
infernus ME RepID=C5U6A7_9EURY
Length = 104
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK-ISKMAPLARKQVDDVLGGED 232
M+ +CP C N+LL E + C C Y +K+ L RK+ V+ G +
Sbjct: 1 MVKFCPKCNNVLL------PSEGKLKCPVCGYTEEGEKEGYEYKEKLKRKEEIAVIEGNE 54
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ + CPKC + +AY+ QTR ADEP T F++C +C H WRE
Sbjct: 55 I-ETLPTIKIECPKCGHTEAYWWLQQTRCADEPETRFYRCKKCGHTWRE 102
[174][TOP]
>UniRef100_Q07271 DNA-directed RNA polymerase subunit M n=1 Tax=Sulfolobus
acidocaldarius RepID=RPOM_SULAC
Length = 111
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD---VLGGEDA 235
+CP C +M++ E K + Y C C Y+ ++K +K+ + + + VL +
Sbjct: 3 FCPKCGSMMMPR-KENGKTV-YKCSKCGYIDTENQKEAKITTVIKHSAKEKTLVLESDMP 60
Query: 236 WKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V T +CP C +AYF +QTRSADEPAT F+KC +C WRE
Sbjct: 61 KTGVQLTRGISCPSCGNDEAYFWILQTRSADEPATRFYKCTKCGKVWRE 109
[175][TOP]
>UniRef100_Q58548 DNA-directed RNA polymerase subunit M n=1 Tax=Methanocaldococcus
jannaschii RepID=RPOM_METJA
Length = 108
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISK----MAPLARKQVDDVLG 223
M+ +CP C N++L K+ + C C Y + SK L K+ +
Sbjct: 1 MVKFCPKCNNLML------PKDGKLKCAVCGYEEETTAEGSKEYEYKEHLENKKEKITVI 54
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ + + T CPKC +++AY+ QTR ADEP T F+KC +C H WRE
Sbjct: 55 ESEGLETLPTTRIECPKCGHNEAYWWLQQTRCADEPETRFYKCKKCGHTWRE 106
[176][TOP]
>UniRef100_Q8U264 DNA-directed RNA polymerase subunit m n=1 Tax=Pyrococcus furiosus
RepID=Q8U264_PYRFU
Length = 110
Score = 67.8 bits (164), Expect = 5e-10
Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNID----KKISKMAPLARKQVDDVLG 223
M+ +CP C ++++ + + + C+ C Y I+ K + + + + V+
Sbjct: 1 MVKFCPKCGSIMIPD----RRRGVFVCRKCGYEEPINPEDTKAYRRTEEVKHRPDEGVVV 56
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
E + TCPKC +++A++ E+QTR+ DEP+T+F+KC +C + WR
Sbjct: 57 IEQEVSTLPTAKVTCPKCGHNEAWWWELQTRAGDEPSTIFYKCKKCGYVWR 107
[177][TOP]
>UniRef100_Q6L0M3 DNA-directed RNA polymerase subunit M n=1 Tax=Picrophilus torridus
RepID=Q6L0M3_PICTO
Length = 101
Score = 67.4 bits (163), Expect = 7e-10
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD--VLGGEDAW 238
+CP C +++ +Y C+ C Y + K K + K D ++ ++
Sbjct: 2 FCPKCGSLMT------PSNGKYICRSCGY--EMSKGAEKSTKIVNKSSDKEIIMIEKEVN 53
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
++A CPKC + AY++ QTRSADEP T F+ C C +RWRE
Sbjct: 54 AEPLDSEAVCPKCHHVGAYYLLKQTRSADEPETKFYTCAACGYRWRE 100
[178][TOP]
>UniRef100_B8D6L3 DNA-directed RNA polymerase subunit M n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6L3_DESK1
Length = 75
Score = 67.0 bits (162), Expect = 9e-10
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2
Query: 257 DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ TCPKC +H+AY+ IQTR+ADEP T FFKC +C + WRE
Sbjct: 33 EVTCPKCGWHEAYYWVIQTRAADEPPTRFFKCTKCGYTWRE 73
[179][TOP]
>UniRef100_A5UMY1 DNA-directed RNA polymerase subunit M, RpoM n=2
Tax=Methanobrevibacter smithii RepID=A5UMY1_METS3
Length = 104
Score = 67.0 bits (162), Expect = 9e-10
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYV------YNIDKKISKMAPLARKQVDDVLGG 226
+CP C +MLL TE EL+ C + YN+++KI + + K G
Sbjct: 3 FCPECGSMLLP--TE-DNELKCSCGYTKKLSKDKSEYNVNEKIKENDSVIEK-------G 52
Query: 227 EDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
ED + T A CP+C + +A + QTRSADE T FFKC++C H WRE
Sbjct: 53 EDV-NTLPTTKAVCPECGHTEASWWLQQTRSADEAETRFFKCLKCGHTWRE 102
[180][TOP]
>UniRef100_A0CQT2 Chromosome undetermined scaffold_24, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0CQT2_PARTE
Length = 104
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/106 (33%), Positives = 56/106 (52%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
+ +CP C+N L +E E S R C C Y + + K++ K+ + +
Sbjct: 1 MNFCPICSNFLSLE-NESSTGYRLKCPGCVYYHPL-KEMRLTKTFQSKEPAPITYPQ--- 55
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
+N TD C KC +A+F E QTR ADE +T+ F+C++C H+W+
Sbjct: 56 QNKQITDEQCDKCGCLKAFFWEFQTRGADEQSTISFECIKCGHKWK 101
[181][TOP]
>UniRef100_A8MBQ2 Transcription termination factor Tfs n=1 Tax=Caldivirga
maquilingensis IC-167 RepID=A8MBQ2_CALMQ
Length = 115
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGED-- 232
I +CP C +++ + ++ + C C YV + S PL + V + E
Sbjct: 7 IKFCPKCGSIM--KPYRNGNKVTWRCPKCGYV----EDSSTTVPLVERTVIEHKPDEKPV 60
Query: 233 ----AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A N+ K TCP+C ++AYF QTR+ADEP T F++C +C + WRE
Sbjct: 61 VLTKANDNLPKVKVTCPRCGNNEAYFWIQQTRAADEPPTRFYRCTRCGYTWRE 113
[182][TOP]
>UniRef100_C1BL61 DNA-directed RNA polymerases III 12.5 kDa polypeptide n=1
Tax=Osmerus mordax RepID=C1BL61_OSMMO
Length = 90
Score = 66.2 bits (160), Expect = 2e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CPTC N+L+VE E K R+ C CPYV+NI +K++ K+VDDVLGG A
Sbjct: 1 MLLFCPTCGNVLIVE--EGQKCYRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGAKA 58
Query: 236 WKNV 247
W+ +
Sbjct: 59 WETL 62
[183][TOP]
>UniRef100_Q2NE53 RpoM1 n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NE53_METST
Length = 105
Score = 66.2 bits (160), Expect = 2e-09
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK--QVDDVLGGEDAW 238
+CP C +L + K+ ++ C C Y + ++ K +A K + D V+ +
Sbjct: 3 FCPECGKVL------FPKDGKFTCDACGYEKGVTEESKKQYEVAEKVDKEDTVIVTDGNV 56
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K + CPKC A++ QTRSADE T FF+C +C + WRE
Sbjct: 57 KTLPTIKVICPKCGNKLAFWWLQQTRSADESETRFFRCTECDYTWRE 103
[184][TOP]
>UniRef100_A6UTI3 Transcription termination factor Tfs n=1 Tax=Methanococcus aeolicus
Nankai-3 RepID=A6UTI3_META3
Length = 103
Score = 66.2 bits (160), Expect = 2e-09
Identities = 35/108 (32%), Positives = 51/108 (47%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M+ +CP C N++L KE C C + ++K S + +++ ED
Sbjct: 1 MVKFCPKCNNIML------PKEDNLVCTVCGFEEELEKTESYELKEKLETKQEIVVIEDV 54
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ T CP C + Y+ QTR ADEP T F+KC +C H WRE
Sbjct: 55 -NTLPTTRIECPNCGNMEVYWWLQQTRCADEPETRFYKCTKCGHTWRE 101
[185][TOP]
>UniRef100_A3DM83 DNA-directed RNA polymerase, subunit M n=1 Tax=Staphylothermus
marinus F1 RepID=A3DM83_STAMF
Length = 104
Score = 66.2 bits (160), Expect = 2e-09
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 152 VYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKT-DATCPKCSYHQAYFMEIQTRSADE 328
+Y I KI + K+ V+ E+ + + T + TCPKC YH+AY+ +QTR+ADE
Sbjct: 30 LYRISVKIEH----SNKEKTVVVDEEERLRGLPITREVTCPKCGYHEAYYWIVQTRAADE 85
Query: 329 PATLFFKCVQCAHRWRE 379
P T F+KC +C + WRE
Sbjct: 86 PPTRFYKCRRCGYVWRE 102
[186][TOP]
>UniRef100_B5ID90 Transcription factor S n=1 Tax=Aciduliprofundum boonei T469
RepID=B5ID90_9EURY
Length = 94
Score = 66.2 bits (160), Expect = 2e-09
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +2
Query: 110 YSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGEDAWKNVAKTDAT-CPKCSY 283
+ K+ ++ C C Y IDK K ++ A+++ V+ E+ K + ++ CPKC +
Sbjct: 2 HPKDGKWVCSSCGYEMPIDKDKSQEIVAEAKEKEMIVISSEEELKALPYDESVICPKCGH 61
Query: 284 HQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A++M QTR+ADEP T F+ C +C HRWRE
Sbjct: 62 AGAHWMLQQTRAADEPETRFYICPKCGHRWRE 93
[187][TOP]
>UniRef100_A8AAT2 DNA-directed RNA polymerase, subunit M n=1 Tax=Ignicoccus
hospitalis KIN4/I RepID=A8AAT2_IGNH4
Length = 113
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLAR-----KQVDDVLGGE 229
+CP C ++++ L+ C C Y + S + + K+ V+
Sbjct: 3 FCPKCGSLMVARRVGGKTILK--CMRCGYEMEVTGAQSTLRTAKKIRHSVKEKTVVIDNN 60
Query: 230 DAWKNVAKT-DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ + KT D CPKC + +AY+ +QTR+ DEP T F+KC +C H WRE
Sbjct: 61 IKVETLPKTRDVICPKCGHDEAYYWFVQTRAGDEPPTRFYKCTRCGHVWRE 111
[188][TOP]
>UniRef100_Q9HJG3 Probable transcription-associated protein TFIIS n=1
Tax=Thermoplasma acidophilum RepID=Q9HJG3_THEAC
Length = 100
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +++ +Y C C Y + +K+ K+ + + + ++ E+
Sbjct: 2 FCPKCGSLMT------PVNGKYVCPSCGYEISKNKETIKIVSKSADK-ETIMIKEEVSAE 54
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+DA CP+C + A ++ QTRSADEP T F+ C +C +RWRE
Sbjct: 55 PLDSDAVCPRCHHKGARYVLKQTRSADEPETKFYTCEECGYRWRE 99
[189][TOP]
>UniRef100_UPI0000164DC6 DNA-directed RNA polymerase subunit M n=1 Tax=Thermoplasma
volcanium GSS1 RepID=UPI0000164DC6
Length = 100
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/105 (31%), Positives = 54/105 (51%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +++ RY C C Y + K+ K+ + + + ++ E+
Sbjct: 2 FCPKCGSLMT------PVNGRYVCPSCGYEVSKKKEDLKIVNKSNDK-ETIMIREEVSAE 54
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+DA CP+C + A ++ QTRSADEP T F+ C +C +RWRE
Sbjct: 55 PLDSDAICPRCHHKGARYVLKQTRSADEPETKFYTCEECGYRWRE 99
[190][TOP]
>UniRef100_Q5CYY8 RNA polymerase III subunit C11 (Fragment) n=1 Tax=Cryptosporidium
parvum Iowa II RepID=Q5CYY8_CRYPV
Length = 62
Score = 64.7 bits (156), Expect = 4e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
W ++ K A CPKCS+ +AYF ++Q RSADEP T F+ CV+C +W+E
Sbjct: 14 WCSLFKLLAVCPKCSFSEAYFFQLQIRSADEPMTSFYTCVKCDFKWKE 61
[191][TOP]
>UniRef100_Q97AQ6 Transcription factor [TFIIS/RPB9] n=1 Tax=Thermoplasma volcanium
RepID=Q97AQ6_THEVO
Length = 106
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/105 (31%), Positives = 54/105 (51%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C +++ RY C C Y + K+ K+ + + + ++ E+
Sbjct: 8 FCPKCGSLMT------PVNGRYVCPSCGYEVSKKKEDLKIVNKSNDK-ETIMIREEVSAE 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+DA CP+C + A ++ QTRSADEP T F+ C +C +RWRE
Sbjct: 61 PLDSDAICPRCHHKGARYVLKQTRSADEPETKFYTCEECGYRWRE 105
[192][TOP]
>UniRef100_C1BNL8 DNA-directed RNA polymerase subunit n=1 Tax=Caligus rogercresseyi
RepID=C1BNL8_9MAXI
Length = 127
Score = 63.9 bits (154), Expect = 8e-09
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 16 IRFCLECNNMLYPKEDKENKALMYACRNCDYKQLADNNCIYVNKIMHEVDEVTNIVSDVI 75
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
G ++ D CPKC + +A F + ++R AD+ L++ C QCAHRW E
Sbjct: 76 GDPTLPRS---EDHPCPKCKHKEAVFFQSESRKADDEMRLYYVCTYPQCAHRWTE 127
[193][TOP]
>UniRef100_A8WJ33 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae
AF16 RepID=A8WJ33_CAEBR
Length = 315
Score = 63.9 bits (154), Expect = 8e-09
Identities = 25/40 (62%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Frame = +2
Query: 266 CPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
CP CS+ +AYFM++QTRSADEP T+F++C CAHRW+E
Sbjct: 276 CPLCSHERAYFMQLQTRSADEPITIFYRCANNSCAHRWKE 315
[194][TOP]
>UniRef100_A6SAU7 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SAU7_BOTFB
Length = 186
Score = 63.9 bits (154), Expect = 8e-09
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKEL------------RYFCQCCPYVYNIDKKISKMAPLARKQV 208
+CP+C+N+L V +T +S R C CPY Y + + I R++
Sbjct: 10 FCPSCSNILTVSVTPHSSTPTPTSTQDLTGANRLECLTCPYQYILTRSIFDRKTFVREEK 69
Query: 209 DDVLGGEDAWKNVAKTDATC--PKCSYHQAYFMEIQTRSADEPATLFFK 349
+DV GG+DAW N C +C+ A +Q RSADEP T F++
Sbjct: 70 EDVFGGKDAWANADTYPKQCANSECNGMVAAARFVQIRSADEPMTGFYR 118
[195][TOP]
>UniRef100_Q9YEZ3 Archaeal transcription factor S n=1 Tax=Aeropyrum pernix
RepID=Q9YEZ3_AERPE
Length = 118
Score = 63.9 bits (154), Expect = 8e-09
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKE--LRYF--CQCCPYVYNI---DKKISKMAPLARKQVDDV 217
I +CP C +++ Y K RY C+ C Y D + +M K D
Sbjct: 5 IKFCPRCGSIM------YPKRDGARYLLVCKSCGYSEEASREDHQAYRMRVTVEKGPRDK 58
Query: 218 LGGED----AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ D V K TCPKC + + YF +QTRSADEP T F++C +C + WRE
Sbjct: 59 IVVIDDETPVGAQVLKGSVTCPKCGHDEVYFWMMQTRSADEPMTRFYRCKRCRYTWRE 116
[196][TOP]
>UniRef100_B9ZDH0 Transcription termination factor Tfs n=1 Tax=Natrialba magadii ATCC
43099 RepID=B9ZDH0_NATMA
Length = 107
Score = 63.5 bits (153), Expect = 1e-08
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+C C +M++ E + R C C D++ Q DD + D N
Sbjct: 3 FCDDCGSMMMAE------DDRMVCTNCGAASERDREREDEFVTTESQTDDEVIESDENAN 56
Query: 245 VA----KTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
TD C +C +A++ QT SADEP T FFKC +C HRWR
Sbjct: 57 FEGKPKATDVVCDECGTQEAWYTLKQTASADEPPTRFFKCTECGHRWR 104
[197][TOP]
>UniRef100_UPI00006CB60F hypothetical protein TTHERM_00444250 n=1 Tax=Tetrahymena
thermophila RepID=UPI00006CB60F
Length = 108
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAW 238
+ +CP CAN L+++ R+ C+ C Y Y + KKI + +R DD +
Sbjct: 1 MNFCPLCANALIIQ--NVGGNNRFSCRTCTYFYPLLKKIETVT-YSRMVKDDTIHDISLQ 57
Query: 239 KNVAKTDAT--CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K +TD CP C AY Q RS DE T + C C+H W++
Sbjct: 58 KESLQTDKDMICPACEKRGAYIRLEQDRSLDEGQTQHYICKNCSHTWKD 106
[198][TOP]
>UniRef100_B4JS70 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila grimshawi
RepID=B4JS70_DROGR
Length = 129
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKDNKTLMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[199][TOP]
>UniRef100_A3MUU7 DNA-directed RNA polymerase, subunit M n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=A3MUU7_PYRCJ
Length = 124
Score = 62.4 bits (150), Expect = 2e-08
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +2
Query: 20 RGTSFRQSERLKMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI-----SKM 184
RGTS R +CP ++L+ LR C C Y + +++ SK
Sbjct: 11 RGTSVR---------FCPNDKSLLIPVKKGDRTVLR--CPKCGYEEEVSQEVRGRYQSKS 59
Query: 185 APLARKQVDDVLGGEDAWKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQC 361
A + Q+ V D N+ K CPKC + +AYF QTR+ADEP T F+KC +C
Sbjct: 60 AVENKNQLIVVA---DNAVNLPKVKTRGCPKCGHDEAYFWVQQTRAADEPPTRFYKCTKC 116
Query: 362 AHRWRE 379
H WRE
Sbjct: 117 GHVWRE 122
[200][TOP]
>UniRef100_UPI0000D56411 PREDICTED: similar to GA17176-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56411
Length = 130
Score = 61.6 bits (148), Expect = 4e-08
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK--QVDDVLGGED 232
I +C C NML + + +K L Y C+ C Y + D K + + + ++ ++
Sbjct: 19 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQHADSKCIYVNKIMHEIDELTHIVPDVI 78
Query: 233 AWKNVAKT-DATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ + +T D CP+C++ +A F + QTR A+E L++ C CAHRW E
Sbjct: 79 SDPTLPRTEDHHCPECNHREAVFFQAQTRRAEEEMRLYYVCTNPMCAHRWTE 130
[201][TOP]
>UniRef100_UPI000038E298 DNA-directed RNA polymerase subunit M n=1 Tax=Ferroplasma
acidarmanus fer1 RepID=UPI000038E298
Length = 101
Score = 61.6 bits (148), Expect = 4e-08
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +2
Query: 125 RYFCQCC----PYVYNIDKKISKMAPLARKQVDDVLGGEDAWKNVAKTDATCPKCSYHQA 292
+Y C C P D+KI ++ + K++ ++ ++ +DA CP C + A
Sbjct: 16 KYICNSCGNEIPKAGTADQKI--ISKSSDKEI--IMVAKEVNAEPLDSDAVCPVCHHTGA 71
Query: 293 YFMEIQTRSADEPATLFFKCVQCAHRWRE 379
Y++ QTRSADEP T F+ C C HRWRE
Sbjct: 72 YYLLKQTRSADEPETKFYTCESCGHRWRE 100
[202][TOP]
>UniRef100_P36958 DNA-directed RNA polymerase II subunit RPB9 n=6 Tax=melanogaster
subgroup RepID=RPB9_DROME
Length = 129
Score = 61.6 bits (148), Expect = 4e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[203][TOP]
>UniRef100_B4NAN1 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila willistoni
RepID=B4NAN1_DROWI
Length = 129
Score = 61.6 bits (148), Expect = 4e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[204][TOP]
>UniRef100_B4MBD3 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila virilis
RepID=B4MBD3_DROVI
Length = 129
Score = 61.6 bits (148), Expect = 4e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKDNKILMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[205][TOP]
>UniRef100_Q299B2 DNA-directed RNA polymerase subunit n=2 Tax=pseudoobscura subgroup
RepID=Q299B2_DROPS
Length = 129
Score = 61.6 bits (148), Expect = 4e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[206][TOP]
>UniRef100_B3LZX4 DNA-directed RNA polymerase subunit n=1 Tax=Drosophila ananassae
RepID=B3LZX4_DROAN
Length = 129
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + +K L Y C+ C Y D KI V DV+
Sbjct: 18 IRFCQECNNMLYPKEDKDNKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ D CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 78 SDPTLPRT---EDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
[207][TOP]
>UniRef100_Q980K2 DNA-directed RNA polymerase, subunit M (RpoM-1) n=1 Tax=Sulfolobus
solfataricus RepID=Q980K2_SULSO
Length = 114
Score = 61.2 bits (147), Expect = 5e-08
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD---VLGG 226
++ +CP C N ++V K + Y C C Y + + + + + + VL
Sbjct: 3 VVKFCPKC-NSMMVPKKSNGKNV-YRCTKCGYEKEVPETTIVVTSKVKHSIKEKTLVLEE 60
Query: 227 EDAWKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
E+ K CP C +AYF +QTR ADEP T F+KC +C WRE
Sbjct: 61 EEMPSGAQKIKGVLCPSCKNDEAYFWILQTRRADEPPTRFYKCTKCGKVWRE 112
[208][TOP]
>UniRef100_A8TE75 Transcription termination factor Tfs n=1 Tax=Methanococcus voltae
A3 RepID=A8TE75_METVO
Length = 105
Score = 61.2 bits (147), Expect = 5e-08
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISK--MAPLARKQVDDVLGGE 229
M+ +CP C N++L KE C C + +++ K ++ + DV E
Sbjct: 1 MVEFCPKCNNIML------PKEGILKCVVCGFESSLENNKDKYELSEKIESKSQDVTVIE 54
Query: 230 DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ + CP C +AY+ QTR ADEP T F+KC +C+H WRE
Sbjct: 55 NV-NTLPSIRIECPSCGNMEAYWWLQQTRCADEPETRFYKCKKCSHTWRE 103
[209][TOP]
>UniRef100_Q8PX24 DNA-directed RNA polymerase subunit M n=1 Tax=Methanosarcina mazei
RepID=Q8PX24_METMA
Length = 107
Score = 60.8 bits (146), Expect = 6e-08
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD----VLG 223
++ +C C +M+ + K+ Y C+ C I+ +++ ++DD VL
Sbjct: 3 LMQFCTKCKSMM------FPKDGNYHCRKCGSTIPIESDAKNF--VSKAKIDDHEVVVLE 54
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
GE + T+A CP+C + A + Q RSADE T FFKC +C + WRE
Sbjct: 55 GEQT-SGLPTTNAKCPECGNNTAAWWLRQLRSADESETRFFKCTKCGYTWRE 105
[210][TOP]
>UniRef100_A6RGN0 Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus
NAm1 RepID=A6RGN0_AJECN
Length = 140
Score = 60.5 bits (145), Expect = 8e-08
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + S R+ C+ CPY Y +D+ + + RK+V DVLG
Sbjct: 3 LTFCPNCSNALTISRADPSPRYPLGVNRFECRTCPYQYILDRTYYERTEMKRKEVSDVLG 62
Query: 224 GEDAWKN 244
G+D WKN
Sbjct: 63 GKDEWKN 69
[211][TOP]
>UniRef100_Q5V537 DNA-directed RNA-polymerase subunit M n=1 Tax=Haloarcula
marismortui RepID=Q5V537_HALMA
Length = 107
Score = 60.5 bits (145), Expect = 8e-08
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+C C +M+ + E CQ C D+ + +Q DD L + N
Sbjct: 3 FCDDCGSMMHADGDEM------VCQSCGARVAKDEDRAAAFVSTDEQSDDELIETEEGSN 56
Query: 245 V----AKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
D TC +C + +A++ QT SADEP T FFKC +C HRWRE
Sbjct: 57 FEGKPTADDVTCEECGHGKAWYTIKQTGSADEPPTRFFKCQECGHRWRE 105
[212][TOP]
>UniRef100_A9A2X5 Transcription termination factor Tfs n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A2X5_NITMS
Length = 105
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG--GEDAW 238
+CP C V+L + + L C C Y ++K +K +Q + +L G +
Sbjct: 3 FCPKCE----VKLKKGTSGLE--CSKCGYTEGAEEKQTKKTVETEEQEESILAFEGNEGE 56
Query: 239 KNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
++ C KC + +A + +QTRSADEP T F++C +C + WR
Sbjct: 57 ESHPTIKIECEKCGHDEAIWWMLQTRSADEPTTQFYRCTKCQYTWR 102
[213][TOP]
>UniRef100_A4WLS3 DNA-directed RNA polymerase, subunit M n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=A4WLS3_PYRAR
Length = 110
Score = 60.5 bits (145), Expect = 8e-08
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKI-----SKMAPLARKQVDDVLGGE 229
+CP ++L+ + + + C C Y + + SKM + V V G E
Sbjct: 3 FCPNDRSILVPK--KKGDKTVLVCPKCGYEEEASQDVKSRYQSKMTVENKNPVVVVAGNE 60
Query: 230 DAWKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N+ K CPKC + +AYF QTR+ADEP T F++C +C H WRE
Sbjct: 61 ---VNLPKVKTRGCPKCGHDEAYFWVQQTRAADEPPTRFYRCTKCGHTWRE 108
[214][TOP]
>UniRef100_A0RXH6 DNA-directed RNA polymerase, subunit M/Transcription elongation
factor TFIIS n=1 Tax=Cenarchaeum symbiosum
RepID=A0RXH6_CENSY
Length = 103
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/104 (30%), Positives = 49/104 (47%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP C + L C C Y + + +K P +VL G K
Sbjct: 3 FCPKCEDRLR------KNGDASVCPKCGYTESAARGPTKAKPAEGTPEINVLDGPVDEKL 56
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
++ C KC + +A + +QTRSADEP T F++C++C+H WR
Sbjct: 57 LSTIKIECEKCGHGEAVWWMLQTRSADEPTTQFYRCIKCSHTWR 100
[215][TOP]
>UniRef100_Q9P9I8 Archaeal transcription factor S n=1 Tax=Methanothermococcus
thermolithotrophicus RepID=Q9P9I8_METTL
Length = 105
Score = 60.5 bits (145), Expect = 8e-08
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYV---------YNIDKKISKMAPLARKQV 208
M+ +CP C N++L K R C C + Y + +KI A+KQ
Sbjct: 1 MVEFCPKCNNIML------PKNGRLKCTVCGFEEELGNRTEEYELKEKIE-----AKKQE 49
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V+ D + T CP C +A + QTR ADEP T F+KC +C H WRE
Sbjct: 50 VTVIEDVDT---LPTTRIECPSCGNMEASWWLQQTRCADEPETRFYKCKKCGHTWRE 103
[216][TOP]
>UniRef100_Q7Q4H0 DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Anopheles
gambiae RepID=Q7Q4H0_ANOGA
Length = 128
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK--QVDDVLGGED 232
I +C C NML + + +K L Y C+ C Y D + + + ++ ++
Sbjct: 17 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 76
Query: 233 AWKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ + +T+ CPKCS+ +A F + QTR A+E L++ C C HRW E
Sbjct: 77 SDPTLPRTEEHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNSSCCHRWTE 128
[217][TOP]
>UniRef100_B7PRG9 DNA-directed RNA polymerase subunit n=1 Tax=Ixodes scapularis
RepID=B7PRG9_IXOSC
Length = 129
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK------KISKMAPLARKQVDDVL 220
I +C C NML + + ++ L Y C+ C Y D KI+ + V DV+
Sbjct: 18 IKFCQECNNMLYPKEDKENRVLLYACRNCDYQQVADNNCIYVNKITHEVDELTQIVSDVV 77
Query: 221 GGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
+ D TCPKCS+ +A F + Q+R A++ L++ C C HRW E
Sbjct: 78 HDPTLPRT---EDHTCPKCSHREAVFFQAQSRRAEDEMRLYYVCTNTNCTHRWTE 129
[218][TOP]
>UniRef100_A8XD45 DNA-directed RNA polymerase subunit n=1 Tax=Caenorhabditis briggsae
RepID=A8XD45_CAEBR
Length = 144
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCP----------YVYNIDKKISKMAPLARKQV 208
I +CP C NML + S+ L Y C+ C YV + +I ++ + +
Sbjct: 35 IKFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVADII 94
Query: 209 DDVLGGEDAWKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
D + KT+ +CPKC+ +A F + QT+ A+E L++ C+ C RW E
Sbjct: 95 HD--------PTLPKTEEHSCPKCTKRKAVFFQAQTKKAEEEMRLYYVCMYCQFRWTE 144
[219][TOP]
>UniRef100_Q96YA8 112aa long hypothetical DNA-directed RNA polymerase subunit M n=1
Tax=Sulfolobus tokodaii RepID=Q96YA8_SULTO
Length = 112
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPY----VYNIDKKISKMAPLARKQVDDVLGGE- 229
+CP C ++++ + + + + Y C C Y + KI + + K+ V+ G+
Sbjct: 3 FCPKCGSIMVPK--KDNGKTMYKCPKCGYEEESTSSGSMKIKTVVKHSIKEKTLVVDGDA 60
Query: 230 -DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
A + K TCP C +AYF +QTR ADEP T F+KC +C WRE
Sbjct: 61 PPAGAQITK-GVTCPACGNDEAYFWILQTRRADEPPTRFYKCTKCGKVWRE 110
[220][TOP]
>UniRef100_C3NFY6 Transcription termination factor Tfs n=1 Tax=Sulfolobus islandicus
Y.N.15.51 RepID=C3NFY6_SULIN
Length = 111
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD---VLGGEDA 235
+CP C N ++V K + Y C C Y + + + + + + +L E+
Sbjct: 3 FCPKC-NSMMVPKKSNGKNI-YRCTKCGYEEEVPETTIVVTSKVKHSIKEKTLILEEEEM 60
Query: 236 WKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K CP C +AYF +QTR ADEP T F+KC +C WRE
Sbjct: 61 PSGAQKIKGVLCPSCKNDEAYFWILQTRRADEPPTRFYKCTKCGKVWRE 109
[221][TOP]
>UniRef100_Q4QDH9 RNA polymerase III C11 subunit, putative n=1 Tax=Leishmania major
RepID=Q4QDH9_LEIMA
Length = 151
Score = 59.7 bits (143), Expect = 1e-07
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 275 CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
C +AYF++IQ RSADEPAT+FFKCV+C H+WR+
Sbjct: 116 CQSTKAYFIQIQMRSADEPATVFFKCVECGHQWRQ 150
[222][TOP]
>UniRef100_A8BBB2 DNA-directed RNA polymerase I 13.1 kDa polypeptide n=1 Tax=Giardia
lamblia ATCC 50803 RepID=A8BBB2_GIALA
Length = 103
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/107 (32%), Positives = 51/107 (47%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDA 235
M ++C CA +L + Y +C C Y ++ + Q V E
Sbjct: 1 MPSFCQECAT-ILETMGPYD-----YCALCQKKYERARQGDVVTSEVHLQTHYV-AQERM 53
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
+N D TCPKC + QAY+ +Q RSADE T+FF+C C H++R
Sbjct: 54 TENRPVIDETCPKCHHGQAYYASMQMRSADEGQTIFFECCSCGHKYR 100
[223][TOP]
>UniRef100_A4HY64 RNA polymerase III C11 subunit, putative n=1 Tax=Leishmania
infantum RepID=A4HY64_LEIIN
Length = 151
Score = 59.7 bits (143), Expect = 1e-07
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 275 CSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
C +AYF++IQ RSADEPAT+FFKCV+C H+WR+
Sbjct: 116 CQSTKAYFIQIQMRSADEPATVFFKCVECGHQWRQ 150
[224][TOP]
>UniRef100_B9LMI0 Transcription factor TFIIS n=1 Tax=Halorubrum lacusprofundi ATCC
49239 RepID=B9LMI0_HALLT
Length = 108
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +2
Query: 203 QVDDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+V DV ED K + KT A CP+C +AY+ Q RSADE T FF C +C H+WRE
Sbjct: 49 EVIDVSDAED--KGLPKTTAHCPECGNDRAYWYMQQIRSADESETRFFVCTECEHKWRE 105
[225][TOP]
>UniRef100_C7NVK8 Transcription termination factor Tfs n=1 Tax=Halorhabdus utahensis
DSM 12940 RepID=C7NVK8_HALUD
Length = 107
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVL--GGEDAW 238
+C C +M+ + E CQ C Y D+ ++ + Q DD L EDA
Sbjct: 3 FCEECGSMMHADGEEM------VCQSCGYREAKDQDLADDFVSTQDQTDDDLIETEEDAN 56
Query: 239 KNVAKT--DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
T D C +C + A++ QT SADEP T FFKC +C HRWR
Sbjct: 57 FEGKPTADDVVCDECGHGVAWYTIKQTGSADEPPTRFFKCKECGHRWR 104
[226][TOP]
>UniRef100_UPI00003C0AF7 PREDICTED: similar to RNA polymerase II 15kD subunit CG3284-PA n=1
Tax=Apis mellifera RepID=UPI00003C0AF7
Length = 130
Score = 59.3 bits (142), Expect = 2e-07
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCP----------YVYNIDKKISKMAPLARKQV 208
I +C C NML + + +K L Y C+ C YV I +I ++ + +
Sbjct: 19 IRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYVNKIMHEIDELTHIVADVI 78
Query: 209 DDVLGGEDAWKNVAKT-DATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
D + +T D CPKC++ +A F + QTR A+E L++ C C HRW E
Sbjct: 79 SD--------PTLPRTEDHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCTNQHCCHRWTE 130
[227][TOP]
>UniRef100_Q1HRD6 DNA-directed RNA polymerase subunit n=1 Tax=Aedes aegypti
RepID=Q1HRD6_AEDAE
Length = 128
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK--QVDDVLGGED 232
I +C C NML + + +K L Y C+ C Y D + + + ++ ++
Sbjct: 17 IRFCQECNNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 76
Query: 233 AWKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKCVQ--CAHRWRE 379
+ + +T+ CPKC++ +A F + QTR A+E L++ C C HRW E
Sbjct: 77 SDPTLPRTEEHACPKCTHREAVFFQAQTRRAEEEMRLYYVCTNPGCCHRWTE 128
[228][TOP]
>UniRef100_B0W4J8 DNA-directed RNA polymerase subunit n=1 Tax=Culex quinquefasciatus
RepID=B0W4J8_CULQU
Length = 127
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARK--QVDDVLGGED 232
I +C C NML + + +K L Y C+ C Y D + + + ++ ++
Sbjct: 16 IRFCQECNNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 75
Query: 233 AWKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 379
+ + +T+ CPKC++ +A F + QTR A+E L++ C C HRW E
Sbjct: 76 SDPTLPRTEEHACPKCAHREAVFFQAQTRRAEEEMRLYYVCTNPNCCHRWTE 127
[229][TOP]
>UniRef100_C3MRD3 Transcription factor S n=5 Tax=Sulfolobus islandicus
RepID=C3MRD3_SULIL
Length = 111
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD---VLGGEDA 235
+CP C +M++ + + R C C Y + + + + + + +L E+
Sbjct: 3 FCPKCNSMMVPKKSNGKNTYR--CTKCGYEEEVPETTIVVTSKVKHSIKEKTLILEEEEM 60
Query: 236 WKNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K CP C +AYF +QTR ADEP T F+KC +C WRE
Sbjct: 61 PSGAQKIKGVLCPSCKNDEAYFWILQTRRADEPPTRFYKCTKCGKVWRE 109
[230][TOP]
>UniRef100_Q9LU97 Similarity to transcription-associated zinc ribbon protein n=1
Tax=Arabidopsis thaliana RepID=Q9LU97_ARATH
Length = 119
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Frame = +2
Query: 35 RQSERLKMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYN----IDKKISKM--APLA 196
R+SE L +C C ML+++ T+Y++ C C N IDK+I+ A
Sbjct: 5 RESEFL----FCNLCGTMLVLKSTKYAE-----CPHCKTTRNAKDIIDKEIAYTVSAEDI 55
Query: 197 RKQVDDVLGGE--DAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHR 370
R+++ L GE A + K C KC + + + QTRSADE T ++ C CAHR
Sbjct: 56 RRELGISLFGEKTQAEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHR 115
Query: 371 WREG 382
+ EG
Sbjct: 116 FTEG 119
[231][TOP]
>UniRef100_Q4DC35 DNA-directed RNA polymerase subunit n=1 Tax=Trypanosoma cruzi
RepID=Q4DC35_TRYCR
Length = 167
Score = 58.9 bits (141), Expect = 2e-07
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Frame = +2
Query: 8 RAVDRGTSFRQ--SERLKMITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNI------ 163
R+ RG R+ S R + +CP C +LL+E + R+ C C YV I
Sbjct: 27 RSRKRGPPRREQWSRRRSAMFFCPFCGTLLLIE--PHHPTNRFACSSCTYVAPIPSTHLL 84
Query: 164 ---------DKKISKMAPLARKQV----DDVLGGEDAWKNVAKTDATCPKCSYHQAYFME 304
+K + A + + ++V GG+ + C ++A++++
Sbjct: 85 TVNHSLLKFNKTVEDDANVKANGIKTKNEEVDGGQLITVRCQNDEKF---CDGNRAHYVQ 141
Query: 305 IQTRSADEPATLFFKCVQCAHRWRE 379
IQ RSADEPAT FFKC++C +W++
Sbjct: 142 IQMRSADEPATTFFKCLKCGFQWKQ 166
[232][TOP]
>UniRef100_C4JZF5 DNA-directed RNA polymerases III 12.5 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JZF5_UNCRE
Length = 116
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKEL-----RYFCQCCPYVYNIDKKISKMAPLARKQVDDVLG 223
+T+CP C+N L + + + R+ C+ CPY Y +D+ + + RK+V DV+G
Sbjct: 3 LTFCPNCSNALTISRGPSTSQYPLGVNRFECRTCPYQYILDRTYFERTEMKRKEVADVMG 62
Query: 224 GEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEP 331
G+D WKN + S + + + +S +P
Sbjct: 63 GKDEWKNADNMRVHYLRGSLERKLISDFEPKSKPQP 98
[233][TOP]
>UniRef100_A6UQ74 Transcription termination factor Tfs n=1 Tax=Methanococcus
vannielii SB RepID=A6UQ74_METVS
Length = 105
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Frame = +2
Query: 56 MITYCPTCANMLLVELTEYSKELRYFCQCCPYV---------YNIDKKISKMAPLARKQV 208
M+ +CP C N++L K + C C + Y + +KI +KQ
Sbjct: 1 MVEFCPKCNNIML------PKNGKLKCVVCKHEEDIGDANKSYELKEKIE-----TKKQE 49
Query: 209 DDVLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V+ D + T CP C +A++ QTR ADEP T F+KC +C+H WRE
Sbjct: 50 VTVIENIDT---MPITRIECPSCGNMEAFWWLQQTRCADEPETRFYKCKKCSHTWRE 103
[234][TOP]
>UniRef100_O27369 DNA-directed RNA polymerase subunit M n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOM_METTH
Length = 104
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKIS---KMAPLARKQVDDVLGGEDA 235
+CP C ++ + E ++ CQC Y +I K+ +++ + + G+D
Sbjct: 3 FCPKCGAVM------FPSEGKFKCQC-GYEKDITDKLKDKYRVSEEVEAKETIIFTGDDV 55
Query: 236 WKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ T CPKC +A++ QTR ADE T FF+C +C H WRE
Sbjct: 56 -NTLPTTRVECPKCGNMEAFWWLQQTRRADESETRFFRCTRCKHTWRE 102
[235][TOP]
>UniRef100_O29033 DNA-directed RNA polymerase subunit M n=1 Tax=Archaeoglobus
fulgidus RepID=RPOM_ARCFU
Length = 103
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVD-DVLGGEDAWK 241
+CP C ++++ + + C+ C Y D + + R + D V+ GE+ K
Sbjct: 3 FCPKCKSLMIYQGD------KLVCRKCGYEKEADDSEELVIKVERNKEDVPVIEGENL-K 55
Query: 242 NVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ T A CP C +++A++ Q R+ADE FF+C +C WRE
Sbjct: 56 TLPTTKAICPACGHNEAFWWLRQLRAADESEVRFFRCTKCGKTWRE 101
[236][TOP]
>UniRef100_Q387Z6 RNA polymerase III C11 subunit, putative n=2 Tax=Trypanosoma brucei
RepID=Q387Z6_9TRYP
Length = 126
Score = 58.2 bits (139), Expect = 4e-07
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKK----ISKMAPLARKQVDD--VLGG 226
+CP C +LL+E R+ C C YV I + I+ K VDD G
Sbjct: 3 FCPFCGTLLLIEPAYPCN--RFSCSSCRYVVPIQSRRPLTINHSFLKYNKVVDDDDEKGS 60
Query: 227 EDAWKNVAKTDATCP--------------KCSYHQAYFMEIQTRSADEPATLFFKCVQCA 364
+ K K + +C +A++++IQ RSADEPAT FFKC++C
Sbjct: 61 SNTVKRGVKEEEEVDGGQVITVRCQNDEKQCDGDRAHYVQIQMRSADEPATTFFKCLKCG 120
Query: 365 HRWRE 379
+W++
Sbjct: 121 FQWKQ 125
[237][TOP]
>UniRef100_Q8ZTX9 DNA-directed RNA polymerase subunit M n=1 Tax=Pyrobaculum
aerophilum RepID=Q8ZTX9_PYRAE
Length = 110
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISK--MAPLARKQVDDVLGGEDAW 238
+CP ++L+ LR C C Y + + + + A + + V+ D
Sbjct: 3 FCPNDKSLLIPVRKGNVTVLR--CPKCGYEEEVSQDVKNRYQSKTAVESRNSVIVVADTT 60
Query: 239 KNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N+ K CPKC + +AY QTR+ADEP T F++C +C + WRE
Sbjct: 61 PNLPKVKTRGCPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGYTWRE 108
[238][TOP]
>UniRef100_Q6LXC3 Transcription factor TFIIS:DNA-directed RNA polymerase, M/15 kDa
subunit n=1 Tax=Methanococcus maripaludis
RepID=Q6LXC3_METMP
Length = 105
Score = 58.2 bits (139), Expect = 4e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVE-------LTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD 214
M+ +CP C N++L + + ++ +EL Q Y + +KI ++KQ
Sbjct: 1 MVEFCPKCNNIMLPKGGVLKCVVCKHEEELGDANQ----EYALKEKIE-----SKKQDVT 51
Query: 215 VLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V+ D + T CP C +A++ QTR ADEP T F+KC +C+H WRE
Sbjct: 52 VIENVDT---LPTTRIECPNCGNMEAFWWLQQTRCADEPETRFYKCKKCSHTWRE 103
[239][TOP]
>UniRef100_C1V4K5 DNA-directed RNA polymerase, subunit M n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V4K5_9EURY
Length = 107
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVD-DVLGGEDAWK 241
+C C +M+ ++++ + C C D ++ Q D DV+ E+
Sbjct: 3 FCDECGSMM------HNQDGQMVCSSCGATQEQDSDLASEFVSTEAQDDSDVIETEEGAN 56
Query: 242 NVAK---TDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWR 376
K TD TC C + +A++ QT SADEP T FFKC C RWR
Sbjct: 57 FEGKPTATDVTCEDCGHGEAWYTIKQTGSADEPPTRFFKCKNCGRRWR 104
[240][TOP]
>UniRef100_B7XPV1 Putative uncharacterized protein n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XPV1_ENTBH
Length = 95
Score = 57.8 bits (138), Expect = 5e-07
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2
Query: 266 CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
CP+C + +A F E+QTRSADE T+F++CV C H WR+
Sbjct: 57 CPRCGHGRALFKEVQTRSADEATTVFYQCVLCEHNWRQ 94
[241][TOP]
>UniRef100_B7XNQ4 Putative uncharacterized protein n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XNQ4_ENTBH
Length = 89
Score = 57.8 bits (138), Expect = 5e-07
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2
Query: 266 CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
CP+C + +A F E+QTRSADE T+F++CV C H WR+
Sbjct: 51 CPRCGHGRALFKEVQTRSADEATTVFYQCVLCEHNWRQ 88
[242][TOP]
>UniRef100_Q46E40 DNA-directed RNA polymerase, subunit M n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46E40_METBF
Length = 104
Score = 57.8 bits (138), Expect = 5e-07
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD----VLGGED 232
+CP C +M+ + K + C+ C + I K + + +++ ++DD VL GE
Sbjct: 3 FCPKCKSMM------FPKNGNFECRKCGNIIPI--KSDEKSFVSKDKIDDHEIVVLEGEQ 54
Query: 233 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
+ T CP+C + A + Q RSADE T FFKC +C WRE
Sbjct: 55 I-SGLPTTSVKCPECGNNTAAWWLRQLRSADESETRFFKCTKCGFTWRE 102
[243][TOP]
>UniRef100_A7I6R8 Transcription termination factor Tfs n=1 Tax=Candidatus
Methanoregula boonei 6A8 RepID=A7I6R8_METB6
Length = 104
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD---VLGGEDA 235
+CP C ++L+ S + C+ C Y+ I+ KM + RK+ ++ ++ ED
Sbjct: 2 FCPECKSLLM------SSGGQLKCRKCGYIRKIESN-DKMT-MERKRTENEITIVDDEDE 53
Query: 236 WKNVAKT-DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N T CPKC + A++ Q R+ADE FF+C +C H WR+
Sbjct: 54 KVNTMPTIQIKCPKCENNLAFWWLRQLRAADESEVRFFRCTECGHTWRQ 102
[244][TOP]
>UniRef100_A6VH15 Transcription termination factor Tfs n=2 Tax=Methanococcus
maripaludis RepID=A6VH15_METM7
Length = 105
Score = 57.8 bits (138), Expect = 5e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVE-------LTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD 214
M+ +CP C N++L + + ++ +EL Q Y + +KI ++KQ
Sbjct: 1 MVEFCPKCNNIMLPKAGVLKCVVCKHEEELGDANQ----EYALKEKIE-----SKKQDVT 51
Query: 215 VLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V+ D + T CP C +A++ QTR ADEP T F+KC +C+H WRE
Sbjct: 52 VIENVDT---LPTTRIECPACGNMEAFWWLQQTRCADEPETRFYKCKKCSHTWRE 103
[245][TOP]
>UniRef100_A4FW95 DNA-directed RNA polymerase, subunit M n=1 Tax=Methanococcus
maripaludis C5 RepID=A4FW95_METM5
Length = 105
Score = 57.8 bits (138), Expect = 5e-07
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +2
Query: 56 MITYCPTCANMLLVE-------LTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDD 214
M+ +CP C N++L + + ++ +EL Q Y + +KI ++KQ
Sbjct: 1 MVEFCPKCNNIMLPKGGVLKCVVCKHEEELGDANQ----EYALKEKIE-----SKKQDVT 51
Query: 215 VLGGEDAWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
V+ D + T CP C +A++ QTR ADEP T F+KC +C+H WRE
Sbjct: 52 VIENVDT---LPTTRIECPACGNMEAFWWLQQTRCADEPETRFYKCKKCSHTWRE 103
[246][TOP]
>UniRef100_C7P305 Transcription termination factor Tfs n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7P305_HALMD
Length = 107
Score = 57.8 bits (138), Expect = 5e-07
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK-KISKMAPLARKQVDDVLGGEDAWK 241
+C C +M+ + E C+ C D + ++ A + DDV+ E+
Sbjct: 3 FCDDCGSMMHTDGDEM------VCKSCGSRVQKDADRAAEFVSTAAQSDDDVIETEEGAN 56
Query: 242 NVAKT---DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K D TC C + +A++ QT SADEP T FFKC C +RWRE
Sbjct: 57 FEGKPTAEDVTCADCGHGKAWYTIKQTGSADEPPTRFFKCQDCGNRWRE 105
[247][TOP]
>UniRef100_Q18FG8 DNA-directed RNA polymerase subunit M2 n=2 Tax=Halobacteriaceae
RepID=Q18FG8_HALWD
Length = 106
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+C C +M+ + + C C Y + D I ++ +D++ E+ +
Sbjct: 3 FCDECGSMMK------KRNEQMVCGSCGYQTDQDSAIGNFVSTQKQTDEDIIETEEGAEF 56
Query: 245 VAKT---DATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
K + C +C + A++ QT SADEP T FFKC +C +RWR+
Sbjct: 57 EGKPTDDNVICDECEHTVAWYTIKQTGSADEPPTRFFKCKECGYRWRD 104
[248][TOP]
>UniRef100_Q74N12 NEQ377 n=1 Tax=Nanoarchaeum equitans RepID=Q74N12_NANEQ
Length = 106
Score = 57.4 bits (137), Expect = 7e-07
Identities = 27/105 (25%), Positives = 54/105 (51%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDKKISKMAPLARKQVDDVLGGEDAWKN 244
+CP ++L+ + + + C C Y + + K ++++ + ++ +
Sbjct: 3 FCPKDGSILIPK--KEGDKTYLVCPVCGYKKEVTSLVIKEEVKKKEELGKGIAEKETIYS 60
Query: 245 VAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
AK CPKCS + + +QTR++DE T+F+KC++C + WRE
Sbjct: 61 KAK-GVKCPKCSSEEVVYFTLQTRASDEAETIFYKCLKCGYTWRE 104
[249][TOP]
>UniRef100_B1YAF4 Transcription termination factor Tfs n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=B1YAF4_THENV
Length = 110
Score = 57.4 bits (137), Expect = 7e-07
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 65 YCPTCANMLLVELTEYSKELRYFCQCCPYVYNI--DKKISKMAPLARKQVDDVLGGEDAW 238
+CP ++L+ LR C C Y D K + A + + V+ D
Sbjct: 3 FCPNDRSLLVPVKRGDKTVLR--CPKCGYEEEASGDVKSRYQSKAAVENKNPVIVVADNP 60
Query: 239 KNVAKTDAT-CPKCSYHQAYFMEIQTRSADEPATLFFKCVQCAHRWRE 379
N+ K CPKC + +AY QTR+ADEP T F++C +C H WRE
Sbjct: 61 VNLPKAKTRGCPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGHTWRE 108
[250][TOP]
>UniRef100_UPI00015B430F PREDICTED: similar to ENSANGP00000019703 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B430F
Length = 131
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Frame = +2
Query: 59 ITYCPTCANMLLVELTEYSKELRYFCQCCP----------YVYNIDKKISKMAPLARKQV 208
I +C C NML + + +K L Y C+ C YV I +I ++ + +
Sbjct: 20 IKFCQECNNMLYPKEDKENKVLMYACRNCDFKTLADSSCIYVNKIMHEIDELTHIVADVI 79
Query: 209 DDVLGGEDAWKNVAKTDA-TCPKCSYHQAYFMEIQTRSADEPATLFFKC--VQCAHRWRE 379
D + +T+ CPKC++ ++ F + QTR A+E L++ C C HRW E
Sbjct: 80 SD--------PTLPRTEEHPCPKCNHRESVFFQAQTRRAEEEMRLYYVCTNAHCTHRWTE 131