AV387541 ( CM026c11_r )

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[1][TOP]
>UniRef100_A8HRP7 DNA-directed RNA polymerase II, 13.6 kDa polypeptide n=1
           Tax=Chlamydomonas reinhardtii RepID=A8HRP7_CHLRE
          Length = 115

 Score =  236 bits (601), Expect = 1e-60
 Identities = 115/115 (100%), Positives = 115/115 (100%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG
Sbjct: 1   MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
           YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH
Sbjct: 61  YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 115

[2][TOP]
>UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RYQ0_PHYPA
          Length = 137

 Score =  116 bits (290), Expect = 1e-24
 Identities = 56/106 (52%), Positives = 73/106 (68%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ D K+ +A TFT + EDHTIGN+LRMQLH D S +FAG
Sbjct: 1   MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTLQREDHTIGNILRMQLHRDPSVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  +VVK+QTN   S   A   A+ DL  E   +   F+
Sbjct: 61  YKLPHPLQYRVVVKIQTNSQSSPMQAYNLAITDLTKELDHLKATFE 106

[3][TOP]
>UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1
           Tax=Ricinus communis RepID=B9RVP3_RICCO
          Length = 156

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/126 (43%), Positives = 79/126 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHTIGN+LRMQLH D++ +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525
           YR+PHPL+  ++V++ T    S   A   A+ DL  E   +   F++ +         + 
Sbjct: 61  YRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEECLRPKGTK-KGSW 119

Query: 526 VTAEWR 543
            T+ WR
Sbjct: 120 YTSSWR 125

[4][TOP]
>UniRef100_Q6ZA50 Os07g0172500 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q6ZA50_ORYSJ
          Length = 120

 Score =  114 bits (284), Expect = 7e-24
 Identities = 52/106 (49%), Positives = 73/106 (68%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +AG+FT   EDHTIGN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V+V T    +   A   A+ DL  E   + + F+
Sbjct: 61  YKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFE 106

[5][TOP]
>UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays
           RepID=B4FJS1_MAIZE
          Length = 120

 Score =  114 bits (284), Expect = 7e-24
 Identities = 50/106 (47%), Positives = 72/106 (67%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHT+GN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V++ T    S   A   A+ DL  E   + + F+
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFE 106

[6][TOP]
>UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RFS8_PHYPA
          Length = 117

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/110 (50%), Positives = 72/110 (65%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ D K+ +A TFT   EDHT+GN++RMQLH D S +FAG
Sbjct: 1   MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTVEREDHTVGNVIRMQLHRDPSVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
           YR+PHPL+  +VVK+QT    S   A   A+ DL  E   +   F+   S
Sbjct: 61  YRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVFEHETS 110

[7][TOP]
>UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum
           bicolor RepID=C5YC44_SORBI
          Length = 117

 Score =  113 bits (282), Expect = 1e-23
 Identities = 50/106 (47%), Positives = 72/106 (67%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHTIGN++RMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V++ T    S   A   A+ DL  E   + + F+
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFE 106

[8][TOP]
>UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum
           bicolor RepID=C5X6I3_SORBI
          Length = 120

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/106 (47%), Positives = 72/106 (67%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHT+GN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V++ T    S   A   A+ DL  E   + + F+
Sbjct: 61  YKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAFE 106

[9][TOP]
>UniRef100_A7P675 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7P675_VITVI
          Length = 116

 Score =  112 bits (280), Expect = 2e-23
 Identities = 50/106 (47%), Positives = 72/106 (67%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHTIGN+LRMQLH D++ +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  +++++ T    S   A   A+ DL  E   +   F+
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 106

[10][TOP]
>UniRef100_A4S056 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S056_OSTLU
          Length = 115

 Score =  112 bits (279), Expect = 3e-23
 Identities = 54/111 (48%), Positives = 76/111 (68%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP R  +FVLPEGERK+ Y+ DTK+++AGTF  + EDHTIGNLLRM+LH +   VFAG
Sbjct: 1   MNQPSRADRFVLPEGERKLSYERDTKVENAGTFVLQREDHTIGNLLRMELHKNPDVVFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
           Y+ PHP +  +V+KV TN   +   A+  A+ +L  E   + ++F   ++A
Sbjct: 61  YKNPHPTDHRIVLKVHTNANTTPVQALRDAVTNLRAEVGDLSQQFADEINA 111

[11][TOP]
>UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis
           thaliana RepID=RPB11_ARATH
          Length = 116

 Score =  111 bits (277), Expect = 5e-23
 Identities = 51/113 (45%), Positives = 75/113 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+RY +FV+PEG +KV Y  DTK+ +A +FT   EDHTIGN++RMQLH D++ +FAG
Sbjct: 1   MNAPERYERFVVPEGTKKVSYDRDTKIINAASFTVEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
           Y++PHPL+  ++V++ T    S   A   A+ DL  E   +  +F+  V+  S
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFS 113

[12][TOP]
>UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR
          Length = 116

 Score =  110 bits (276), Expect = 6e-23
 Identities = 51/106 (48%), Positives = 71/106 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHTIGN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V++ T    S   A   A+ DL  E   +   F+
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106

[13][TOP]
>UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FGH5_MEDTR
          Length = 116

 Score =  110 bits (274), Expect = 1e-22
 Identities = 49/106 (46%), Positives = 71/106 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHTIGN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  +++++ T    S   A   ++ DL  E   +   F+
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 106

[14][TOP]
>UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SW39_SOYBN
          Length = 116

 Score =  108 bits (270), Expect = 3e-22
 Identities = 49/106 (46%), Positives = 71/106 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   E+HTIGN+LRMQLH D + +FAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  ++V++ T    S   A   ++ DL  E   +   F+
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFE 106

[15][TOP]
>UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NN58_PICSI
          Length = 120

 Score =  108 bits (270), Expect = 3e-22
 Identities = 49/106 (46%), Positives = 71/106 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY +FV+PEG +KV Y+ D K+ +A TF    EDHTIGN++RMQLH D + +FAG
Sbjct: 1   MNAPDRYEKFVVPEGTKKVSYERDMKIMNAATFVIEREDHTIGNIVRMQLHRDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPL+  +++++QT    S   A   A++DL  E   +   F+
Sbjct: 61  YKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFE 106

[16][TOP]
>UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
           RepID=C1EAB7_9CHLO
          Length = 101

 Score =  105 bits (261), Expect = 3e-21
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP R  +FVLP+G RK+ +  DTK+ +AGT+  + EDHT+GN++RMQLH D + VFAG
Sbjct: 1   MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTYVVQKEDHTLGNIVRMQLHRDPNVVFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANE 456
           Y++PHP +  +V+KV TN   S   AM  ++  L+ E
Sbjct: 61  YQVPHPSDNRIVIKVHTNKNSSPMQAMTESVNCLSEE 97

[17][TOP]
>UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium
           discoideum RepID=RPB11_DICDI
          Length = 120

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/109 (45%), Positives = 72/109 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  FVLP+G +KV    DTK+ +A  FT   EDHTIGNL+RMQL AD+  +FAG
Sbjct: 1   MNAPDRFELFVLPDGAKKVTMVRDTKIPNASMFTILKEDHTIGNLIRMQLIADQDIIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           YR+PHPLE  + +++QTN   +  + +  ++E L+ E+  +   F + V
Sbjct: 61  YRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSFIEQV 109

[18][TOP]
>UniRef100_A5BQX0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5BQX0_VITVI
          Length = 129

 Score =  103 bits (256), Expect = 1e-20
 Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 13/119 (10%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERK-------------VKYKADTKLKDAGTFTFRSEDHTIGNLLR 306
           MN PDRY +FV+PEG +K             V Y+ DTK+ +A +FT   EDHTIGN+LR
Sbjct: 1   MNAPDRYERFVVPEGTKKYIVFSLLSQKLSLVSYERDTKIINAASFTVEREDHTIGNILR 60

Query: 307 MQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           MQLH D++ +FAGY++PHPL+  +++++ T    S   A   A+ DL  E   +   F+
Sbjct: 61  MQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 119

[19][TOP]
>UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD
          Length = 117

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/109 (43%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    +  +A MHA+ DL  E  +  E F +A+
Sbjct: 61  YKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEERFKEAI 109

[20][TOP]
>UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes
           aegypti RepID=Q16IF1_AEDAE
          Length = 117

 Score =  102 bits (253), Expect = 3e-20
 Identities = 47/108 (43%), Positives = 71/108 (65%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           Y++PHPLE   V+++QT    S ++A M+A+ DL +E  +  E F +A
Sbjct: 61  YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFKEA 108

[21][TOP]
>UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS
          Length = 117

 Score =  102 bits (253), Expect = 3e-20
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    S ++A M+A+ DL  E  +  E F  A+
Sbjct: 61  YKVPHPLEHKFVIRIQTTAEYSPQEAFMNAITDLLAELSLFEERFKDAI 109

[22][TOP]
>UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila
           RepID=RPB11_DROME
          Length = 117

 Score =  102 bits (253), Expect = 3e-20
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    S ++A M+A+ DL  E  +  E F  A+
Sbjct: 61  YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAI 109

[23][TOP]
>UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5702A
          Length = 117

 Score =  101 bits (252), Expect = 4e-20
 Identities = 45/109 (41%), Positives = 73/109 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYDGEKKIIREQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    S ++A+M+++ DL +E  +  E F +A+
Sbjct: 61  YKVPHPLEHKFVLRIQTTSDYSPQEALMNSITDLISELSLFEERFKEAI 109

[24][TOP]
>UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex
           quinquefasciatus RepID=B0WDB4_CULQU
          Length = 117

 Score =  101 bits (252), Expect = 4e-20
 Identities = 47/108 (43%), Positives = 71/108 (65%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           Y++PHPLE   V+++QT    S ++A M+A+ DL +E  +  E F +A
Sbjct: 61  YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFREA 108

[25][TOP]
>UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001868C2E
          Length = 116

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/109 (44%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GNLLR QL  D   +FAG
Sbjct: 1   MNAPPTFESFLLFEGEKKITITKDTKVPNAALFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    S ++A  +A+ DL +E  ++ E F  AV
Sbjct: 61  YKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 109

[26][TOP]
>UniRef100_C8V407 DNA-directed RNA polymerase II subunit RPB11a, putative
           (AFU_orthologue; AFUA_7G03860) n=2 Tax=Emericella
           nidulans RepID=C8V407_EMENI
          Length = 129

 Score =  100 bits (250), Expect = 6e-20
 Identities = 47/114 (41%), Positives = 69/114 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY  FVL  GE KV+ + DT++  +  FTF  EDHT+GNL+R +L      +FA 
Sbjct: 1   MNAPDRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL P  +++VQT+G  S + A++ A  +L  +  I+  EF +      M
Sbjct: 61  YKVPHPLVPKFILRVQTDGDISPKQAVITACNELVRDLGILSREFTKEYELRKM 114

[27][TOP]
>UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186CAF7
          Length = 117

 Score =  100 bits (249), Expect = 8e-20
 Identities = 45/109 (41%), Positives = 72/109 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+  + D K+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLFDGEKKIVKELDQKVPNAAIFTINKEDHTLGNMIRDQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    + +DA+M+A+ DL +E  +  E F +A+
Sbjct: 61  YKVPHPLEHKFVLRIQTTSDYTPQDALMNAITDLLSELSLFEERFKEAI 109

[28][TOP]
>UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed)
           polypeptide J n=1 Tax=Ciona intestinalis
           RepID=UPI000180BEE7
          Length = 117

 Score =  100 bits (249), Expect = 8e-20
 Identities = 47/109 (43%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+    DTK+ +A  FT   EDHT+GN+LR QL  D   +FAG
Sbjct: 1   MNAPPAFETFLLFDGEKKISITKDTKVPNAAHFTVNKEDHTLGNILRTQLLKDPKVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   +++VQT G  S ++A  +A+ DL +E  ++ E F   V
Sbjct: 61  YKVPHPLEHKFILRVQTTGDYSPQEAFTNAITDLISEISLLEERFKATV 109

[29][TOP]
>UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1
           Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG
          Length = 117

 Score =  100 bits (249), Expect = 8e-20
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLMKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[30][TOP]
>UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B4993
          Length = 117

 Score =  100 bits (248), Expect = 1e-19
 Identities = 46/109 (42%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    +  +A M+A+ DL  E  +  E F +A+
Sbjct: 61  YKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVTDLIAELSLFEERFKEAI 109

[31][TOP]
>UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI0000019E7A
          Length = 117

 Score =  100 bits (248), Expect = 1e-19
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[32][TOP]
>UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri
           RepID=Q69G41_BRABE
          Length = 135

 Score =  100 bits (248), Expect = 1e-19
 Identities = 48/105 (45%), Positives = 67/105 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GNLLR QL  D   +FAG
Sbjct: 1   MNAPPTFESFLLFEGEKKITITKDTKVPNAAIFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE   V++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEVSLLEERF 105

[33][TOP]
>UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Triatoma infestans RepID=A6YPS3_TRIIF
          Length = 117

 Score =  100 bits (248), Expect = 1e-19
 Identities = 44/109 (40%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE KV  + DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPTFDSFLLYDGEHKVIREMDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPKVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPL+P  V+++QT   ++ +  + +A+ DL +E  +  E F +A+
Sbjct: 61  YKVPHPLDPKFVIRIQTTNDETPQSVLKNAITDLISELSLFEERFKEAI 109

[34][TOP]
>UniRef100_A2R179 Contig An13c0010, complete genome n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R179_ASPNC
          Length = 129

 Score =  100 bits (248), Expect = 1e-19
 Identities = 50/128 (39%), Positives = 74/128 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY  FVL  GE KV+ + DT++  +  FTF  EDHT+GNL+R +L      +FA 
Sbjct: 1   MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525
           Y++PHPL P   ++VQT+G  + +DA++ A  +L  +  I+  EF +      M      
Sbjct: 61  YKVPHPLVPNFQLRVQTDGDITPKDAVIAACHELVRDLGILSREFTKEYELRKM----VG 116

Query: 526 VTAEWRGG 549
            TA+ + G
Sbjct: 117 ATAQQQNG 124

[35][TOP]
>UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis
           RepID=B7PS85_IXOSC
          Length = 117

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 45/109 (41%), Positives = 71/109 (65%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITIEKDTKVPNAAIFTVNKEDHTLGNMIRAQLLKDPCVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   +++VQT    + ++A  +A+ DL +E  ++ E F ++V
Sbjct: 61  YKVPHPLEHKFILRVQTTPDSTPQEAFTNAITDLISELSLLEERFKESV 109

[36][TOP]
>UniRef100_A1DC50 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Neosartorya fischeri NRRL 181 RepID=A1DC50_NEOFI
          Length = 167

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 47/113 (41%), Positives = 70/113 (61%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           +QP  +  FVL  GE KV+ +ADT++  +  FTF  EDHT+GNLLR +L  +   +FAGY
Sbjct: 40  DQPRSFESFVLSPGEEKVEVEADTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGY 99

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           ++PHPL P   ++VQT+G  + +DA++ A  DL  +  I+  EF +      M
Sbjct: 100 KVPHPLVPKFELRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 152

[37][TOP]
>UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE
          Length = 117

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[38][TOP]
>UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BJJ1_OSMMO
          Length = 117

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[39][TOP]
>UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus
            familiaris RepID=UPI00005A0EE3
          Length = 1108

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 49/125 (39%), Positives = 75/125 (60%)
 Frame = +1

Query: 118  CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297
            CGF      G    + MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN
Sbjct: 982  CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 1035

Query: 298  LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
            +++ QL  D   +FAGY++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E 
Sbjct: 1036 IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 1095

Query: 478  FDQAV 492
            F  A+
Sbjct: 1096 FRVAI 1100

[40][TOP]
>UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA
          Length = 117

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHTIGN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[41][TOP]
>UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei
           RepID=B5XEX2_SALSA
          Length = 117

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[42][TOP]
>UniRef100_B4I598 GM17133 n=1 Tax=Drosophila sechellia RepID=B4I598_DROSE
          Length = 105

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 45/103 (43%), Positives = 68/103 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDHNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLE 474
           Y++PHPLE   V+++QT    S ++A M+A+ DL  E+ +  E
Sbjct: 61  YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAEFSLFEE 103

[43][TOP]
>UniRef100_Q4WG57 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Aspergillus fumigatus RepID=Q4WG57_ASPFU
          Length = 167

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 55/151 (36%), Positives = 82/151 (54%)
 Frame = +1

Query: 55  PTLIDNHCAKIQVARCFHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKA 234
           P ++ N  A    AR  H T  G    +   S+     +QP  +  FVL  GE KV+ + 
Sbjct: 6   PFMLPNEMA---YARWIHATG-GSRNHNAFHSSINLDNDQPRSFESFVLSPGEEKVEIET 61

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
           DT++  +  FTF  EDHT+GNLLR +L  +   +FAGY++PHPL P   ++VQT+G  + 
Sbjct: 62  DTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGYKVPHPLVPKFELRVQTDGEITP 121

Query: 415 EDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           +DA++ A  DL  +  I+  EF +      M
Sbjct: 122 KDALLAACHDLVKDLGILSREFTKEYELRKM 152

[44][TOP]
>UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001923CF4
          Length = 117

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 47/109 (43%), Positives = 68/109 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+ +  F+L +GE+K+    DTK+ +A  FT   EDHT+GNL+R QL  D   +FAG
Sbjct: 1   MNAPESFEPFLLLDGEKKINIVKDTKVPNAAHFTVMKEDHTLGNLIRSQLLKDPQVIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           YR+PHPLE    V++QT    S ++A   A+ DL +E  ++ E F  A+
Sbjct: 61  YRVPHPLEHKFNVRIQTTPDYSPQEAFTSAITDLLSEISLLEERFKSAL 109

[45][TOP]
>UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED
          Length = 191

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 45/110 (40%), Positives = 71/110 (64%)
 Frame = +1

Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
           +MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FA
Sbjct: 74  SMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 133

Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           GY++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 134 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 183

[46][TOP]
>UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1
           Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR
          Length = 117

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 46/109 (42%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHTIGN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[47][TOP]
>UniRef100_A7SGE2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SGE2_NEMVE
          Length = 117

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 47/109 (43%), Positives = 68/109 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+ +  F+L +G++K+    DTK+ +A  F    EDHT+GNLLR QL  D   +FAG
Sbjct: 1   MNAPEPFEPFLLLDGDKKITITKDTKVPNAAHFVVNKEDHTLGNLLREQLLKDPQVIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++ HPLE   V++VQT    S ++A  HA+ DL +E  ++ E F  AV
Sbjct: 61  YKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERFKAAV 109

[48][TOP]
>UniRef100_Q1DQC2 DNA-directed RNA polymerase II n=1 Tax=Coccidioides immitis
           RepID=Q1DQC2_COCIM
          Length = 128

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 46/114 (40%), Positives = 69/114 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  FVL  GE+KV+ + DT++     FTF  EDHT+GNL+R QL   +   FAG
Sbjct: 1   MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRAQLLKSQHVQFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL    +++VQT+G  + +DA++ A  +L  +   +  EF +      M
Sbjct: 61  YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114

[49][TOP]
>UniRef100_C5PBJ9 RNA polymerase Rpb3/Rpb11 dimerization domain containing protein
           n=1 Tax=Coccidioides posadasii C735 delta SOWgp
           RepID=C5PBJ9_COCP7
          Length = 128

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 46/114 (40%), Positives = 69/114 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  FVL  GE+KV+ + DT++     FTF  EDHT+GNL+R QL   +   FAG
Sbjct: 1   MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL    +++VQT+G  + +DA++ A  +L  +   +  EF +      M
Sbjct: 61  YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114

[50][TOP]
>UniRef100_B8NFM6 DNA-directed RNA polymerase II subunit RPB11a, putative n=2
           Tax=Aspergillus RepID=B8NFM6_ASPFN
          Length = 129

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 46/114 (40%), Positives = 69/114 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY  FVL  GE KV+ + DT++  +  FTF  EDHT+GNL+R +L      +FA 
Sbjct: 1   MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL P   ++VQT+G  + ++A++ A  +L  +  I+  EF +      M
Sbjct: 61  YKVPHPLVPKFELRVQTDGEITPKEAVIAACHELVRDLGILSREFTKEYELRKM 114

[51][TOP]
>UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus
           RepID=RPB11_MOUSE
          Length = 117

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 45/109 (41%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRGAI 109

[52][TOP]
>UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota
           RepID=RPB11_HUMAN
          Length = 117

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 45/109 (41%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[53][TOP]
>UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles
           gambiae RepID=RPB11_ANOGA
          Length = 117

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 46/109 (42%), Positives = 70/109 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+  + D K+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V+++QT    S  +A M+A+ DL +E  +  E F +A+
Sbjct: 61  YKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERFREAM 109

[54][TOP]
>UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI0000EB32C9
          Length = 129

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 48/121 (39%), Positives = 73/121 (60%)
 Frame = +1

Query: 118 CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297
           CGF      G    + MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN
Sbjct: 4   CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 57

Query: 298 LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
           +++ QL  D   +FAGY++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E 
Sbjct: 58  IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 117

Query: 478 F 480
           F
Sbjct: 118 F 118

[55][TOP]
>UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BLH2_OSMMO
          Length = 117

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 46/105 (43%), Positives = 68/105 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLSKEDHTLGNIIRSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  +V++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[56][TOP]
>UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1
           Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS
          Length = 124

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+R   F+L + E K++Y+ DTK+ +AGTFTF  EDHT+ NLLRMQL  D +  FAG
Sbjct: 1   MNAPERSSAFLLDDDEEKIEYQPDTKVSNAGTFTFNKEDHTVANLLRMQLLRDPAVKFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y  PHPL   + +K+QT  ++ +  + +  A+EDL+NE   +L +   A+
Sbjct: 61  YMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHLLTQVTDAI 110

[57][TOP]
>UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1
           Tax=Monodelphis domestica RepID=UPI00005EC058
          Length = 128

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[58][TOP]
>UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus
           musculus RepID=UPI00001F2CA1
          Length = 111

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[59][TOP]
>UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3S6B1_TRIAD
          Length = 116

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 47/109 (43%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L   E+K+    DTK+ +A  FT   EDHT+GN++R QL  D   +FAG
Sbjct: 1   MNAPAPFEHFLLLPDEKKITITKDTKVPNACHFTIAKEDHTLGNIIRAQLLKDPQVIFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  +V++VQT    S E+A  +AL DL +E +++ + F  AV
Sbjct: 61  YKVPHPLEYDVVIRVQTTSNYSPEEAFSNALTDLISELNVLDDRFKAAV 109

[60][TOP]
>UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN
          Length = 127

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[61][TOP]
>UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens
           RepID=A6NK79_HUMAN
          Length = 116

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[62][TOP]
>UniRef100_A1CD73 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Aspergillus clavatus RepID=A1CD73_ASPCL
          Length = 165

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 46/113 (40%), Positives = 67/113 (59%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           +QP  +  FVL  GE KV+ + DT++     FTF  EDHT+GNLLR +L      +FAGY
Sbjct: 38  DQPHSFESFVLSPGEEKVEVQTDTRIPSTAIFTFNKEDHTLGNLLRSRLLQSPHVLFAGY 97

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           +IPHPL P   +++QT+G  + +DA++ A  DL  +  I+  EF +      M
Sbjct: 98  KIPHPLVPKFELRIQTDGEVTPKDALLAACHDLVKDLGILSREFTKEFELRKM 150

[63][TOP]
>UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus
           RepID=Q3TYI2_MOUSE
          Length = 117

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 44/109 (40%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +F G
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFVG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[64][TOP]
>UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB
          Length = 117

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/106 (42%), Positives = 68/106 (64%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN    +  F+L +GE+K+  + DTK+ +A  FT   EDHT+GN+LR QL  D   +FAG
Sbjct: 1   MNAAPTFESFILFDGEKKITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++PHPLE   V++VQT    S ++A  +A+ DL +E  ++ E F+
Sbjct: 61  YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERFN 106

[65][TOP]
>UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus
           mykiss RepID=C1BF62_ONCMY
          Length = 117

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 45/109 (41%), Positives = 68/109 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIKQQLLKDPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE   V++VQT    S ++A  + + DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERFRVAI 109

[66][TOP]
>UniRef100_C1MHV3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MHV3_9CHLO
          Length = 152

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP R  +FVLP+G RK+ +  DTK+ +AGTF  + EDHT+GN +RMQLH D   VF+G
Sbjct: 1   MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTFVVQKEDHTLGNAVRMQLHRDPEVVFSG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKS 411
           Y++PHP +  +V+KV+    +S
Sbjct: 61  YQVPHPSDNRIVIKVRAASAQS 82

[67][TOP]
>UniRef100_B7G3C7 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7G3C7_PHATR
          Length = 125

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPE--GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
           MN P+R   F+L E  GERK+ Y  DTK+ +AGTF    EDHT+ NLLRMQL  D    F
Sbjct: 1   MNAPERASSFLLDEDSGERKIVYTTDTKVTNAGTFRLNKEDHTVLNLLRMQLLRDPGVRF 60

Query: 340 AGYRIPHPLEPVMVVKVQTNGT-KSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           AGY  PHPL   M +KVQTN +  S  + + +A+EDL +E   +L+E   A+
Sbjct: 61  AGYIHPHPLINYMELKVQTNSSHTSPTEVLSNAIEDLGSETDHLLKEVQNAM 112

[68][TOP]
>UniRef100_B6HNK8 Pc21g05130 protein n=1 Tax=Penicillium chrysogenum Wisconsin
           54-1255 RepID=B6HNK8_PENCW
          Length = 128

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 45/105 (42%), Positives = 64/105 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDRY   +L  GE K+  + DT+L  A  FTF  EDHT+GN+LR +L      +FA 
Sbjct: 1   MNAPDRYEAILLAPGENKIDVEVDTRLPSAAIFTFHKEDHTLGNMLRQRLLKTAHVIFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           YR+PHPL P   ++VQT+G  +   A+++A + L  +  I+  EF
Sbjct: 61  YRVPHPLTPEFQLRVQTDGEITPRQAVINASQALIKDLGILSREF 105

[69][TOP]
>UniRef100_C5G7X6 DNA-directed RNA polymerase II polypeptide n=2 Tax=Ajellomyces
           dermatitidis RepID=C5G7X6_AJEDR
          Length = 128

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 42/114 (36%), Positives = 70/114 (61%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+R+  FVL  GE+KV+ + DT++     FTF  EDHT+GN++R +L      +F+G
Sbjct: 1   MNAPERFESFVLLPGEKKVEVEVDTRIPSTAIFTFHKEDHTLGNMIRSRLINSSHVLFSG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL P  +++VQT+G  + ++A++ A  +L  +   +  EF +      M
Sbjct: 61  YKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLGSLSREFTKEYELRKM 114

[70][TOP]
>UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE
          Length = 119

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 43/94 (45%), Positives = 62/94 (65%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PD +  F L +GE K+ Y+ D+K+ +AGTF    EDHT+GNLL  QL  D   +FAG
Sbjct: 1   MNAPDPFESFRLEDGEAKITYEPDSKVPNAGTFRMNREDHTVGNLLASQLAKDPRVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           Y++PHPLE  ++++V T    S ++A+  AL D+
Sbjct: 61  YKVPHPLEHYILLRVHTTAQYSPKEALKQALHDV 94

[71][TOP]
>UniRef100_C1FZC5 DNA-directed RNA polymerase II n=2 Tax=Paracoccidioides
           brasiliensis RepID=C1FZC5_PARBD
          Length = 128

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 42/114 (36%), Positives = 70/114 (61%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+R+  FVL  GE+KV+ + DT++     FTF  EDHT+GN++R +L      +F+G
Sbjct: 1   MNAPERFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKEDHTLGNMIRSRLLNSSHVLFSG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPL P  +++VQT+G  + ++A++ A  +L  +   +  EF +      M
Sbjct: 61  YKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLGALSREFTKEYELRKM 114

[72][TOP]
>UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI
          Length = 117

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/109 (39%), Positives = 69/109 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYDGEKKIVKEVDTKVTNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y+ PHPLE    +++QT    + +DA+ +++ DL  E  +  E F +A+
Sbjct: 61  YKQPHPLEHKFELRIQTTSDYTPQDALTNSITDLLAELSLFEERFKEAL 109

[73][TOP]
>UniRef100_UPI0000E21436 PREDICTED: similar to MGC13098 protein n=1 Tax=Pan troglodytes
           RepID=UPI0000E21436
          Length = 398

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 42/106 (39%), Positives = 68/106 (64%)
 Frame = +1

Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
           +MN P  +  F+L EGE+K+    D K+ +A  FT   EDHT+GN+++ QL  D   +FA
Sbjct: 239 SMNAPPAFESFLLFEGEKKISINKDFKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 298

Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           GY++PHPLE  ++++ QT    S ++A+ +A+ DL +E  ++ E F
Sbjct: 299 GYKVPHPLERKIIIEXQTTPDYSPQEALPNAIADLISELSLLEERF 344

[74][TOP]
>UniRef100_B6Q8P4 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Penicillium marneffei ATCC 18224 RepID=B6Q8P4_PENMQ
          Length = 128

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 45/114 (39%), Positives = 67/114 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR   F+L EGE+K++ KADT+      FT   EDH++GNLLR +L  ++   FA 
Sbjct: 1   MNAPDRTESFILGEGEKKIEEKADTRTPSTSIFTINKEDHSVGNLLRGRLLQNRHVTFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y+IPHPL   + ++VQT+G  + +DA++ A  D   +   +  EF +      M
Sbjct: 61  YKIPHPLVHKLELRVQTDGEITPKDALLAACHDTVRDLGTLSREFTKEFELRKM 114

[75][TOP]
>UniRef100_UPI0000E2C133 conserved hypothetical protein n=1 Tax=Aspergillus terreus NIH2624
           RepID=UPI0000E2C133
          Length = 1608

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 43/104 (41%), Positives = 65/104 (62%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N   RY  FVL  GE KV+ + DT++  +  FTF  EDHT+GNLL  +L      +FA Y
Sbjct: 39  NDLPRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLLSSRLLQSSHVLFAAY 98

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           ++PHPL+P  +++VQT+G  + +DA++ A  +L  +  I+  EF
Sbjct: 99  KVPHPLDPKFLLRVQTDGEITPKDAVIAACHELVRDLGILSREF 142

[76][TOP]
>UniRef100_C1H7F3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Paracoccidioides brasiliensis Pb01
           RepID=C1H7F3_PARBA
          Length = 169

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 47/149 (31%), Positives = 80/149 (53%)
 Frame = +1

Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
           F  +A  + ++ C     R  ++   R+  FVL  GE+KV+ + DT++     FTF  ED
Sbjct: 21  FDSSAASYRQNPCRTKV-RPHLDNVSRFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKED 79

Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
           HT+GN++R +L      +F+GY++PHPL P  +++VQT+G  + ++A++ A  +L  +  
Sbjct: 80  HTLGNMIRSRLLNSSHVLFSGYKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLG 139

Query: 463 IMLEEFDQAVSAASMH*DAAAVTAEWRGG 549
            +  EF +      M          WRGG
Sbjct: 140 ALSREFTKEYELRKMEPGQG-----WRGG 163

[77][TOP]
>UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0001AE70B6
          Length = 180

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 44/106 (41%), Positives = 68/106 (64%)
 Frame = +1

Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
           +MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FA
Sbjct: 22  SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80

Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           GY++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 81  GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 126

[78][TOP]
>UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0000163C17
          Length = 158

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/105 (41%), Positives = 67/105 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[79][TOP]
>UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens
           RepID=Q8TDE6_HUMAN
          Length = 158

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/105 (41%), Positives = 67/105 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[80][TOP]
>UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens
           RepID=Q59FR2_HUMAN
          Length = 180

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/106 (41%), Positives = 67/106 (63%)
 Frame = +1

Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
           +MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FA
Sbjct: 22  SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80

Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           GY++PHPLE  ++++VQT    S ++A  +A+ DL  E  ++ E F
Sbjct: 81  GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLIRELSLLEERF 126

[81][TOP]
>UniRef100_C4K042 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Uncinocarpus reesii 1704 RepID=C4K042_UNCRE
          Length = 125

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/109 (40%), Positives = 66/109 (60%)
 Frame = +1

Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360
           R+  FVL  GE+KV+ + DT+L     FTF  EDHT+GNL+R QL   +   FAGY++PH
Sbjct: 3   RFESFVLGPGEKKVEMEPDTRLPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAGYKVPH 62

Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           PL    +++VQT+GT + +DA++ A  +L  +   +  EF +      M
Sbjct: 63  PLVHKFMLRVQTDGTITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 111

[82][TOP]
>UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo
           sapiens RepID=RPB1C_HUMAN
          Length = 115

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/105 (41%), Positives = 67/105 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[83][TOP]
>UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo
           sapiens RepID=RPB1B_HUMAN
          Length = 115

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/105 (41%), Positives = 67/105 (63%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[84][TOP]
>UniRef100_UPI0001792BF8 PREDICTED: similar to GA19897-PA n=1 Tax=Acyrthosiphon pisum
           RepID=UPI0001792BF8
          Length = 119

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+  + DTK+ +A  FT   EDHT+GN++R QL  D + +FAG
Sbjct: 1   MNAPPTFESFLLYDGEKKIVQELDTKVVNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE    +++QT+  + + +DA+ ++L DL  E  +  E F  A+
Sbjct: 61  YKLPHPLEHKFELRIQTSCPEYTPQDALTNSLTDLLAELSLFEERFKDAL 110

[85][TOP]
>UniRef100_C4Q8A9 DNA-directed rna polymerase II 13.3 kD polypeptide, putative n=1
           Tax=Schistosoma mansoni RepID=C4Q8A9_SCHMA
          Length = 110

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 43/108 (39%), Positives = 67/108 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L +GE+K+ ++ DT++ +A  FT   EDHT+GN++  QL  D   +FAG
Sbjct: 1   MNAPASFEPFLLADGEKKISFEKDTQVPNAAIFTLNREDHTVGNMITCQLLKDPRVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           Y+ PHPLE  +V++V T    +  D  + AL+DL +E   + E+F  A
Sbjct: 61  YKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQFRMA 108

[86][TOP]
>UniRef100_UPI000155D3C2 PREDICTED: similar to RNA polymerase II n=1 Tax=Ornithorhynchus
           anatinus RepID=UPI000155D3C2
          Length = 117

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 42/109 (38%), Positives = 67/109 (61%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ QL  D   +   
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLLQE 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109

[87][TOP]
>UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo
           sapiens RepID=UPI000020F7F2
          Length = 115

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/105 (41%), Positives = 66/105 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+  A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[88][TOP]
>UniRef100_Q8IH32 GM15177p n=1 Tax=Drosophila melanogaster RepID=Q8IH32_DROME
          Length = 136

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 19/128 (14%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309
           MN P  +  F+L EGE+K+  + DTK+ +A  FT   EDHT+GN++R             
Sbjct: 1   MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRKYVGQQARLITHE 60

Query: 310 -------QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIM 468
                  QL  D + +FAGY++PHPLE   V+++QT    S ++A M+A+ DL  E  + 
Sbjct: 61  ICILACSQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLF 120

Query: 469 LEEFDQAV 492
            E F  A+
Sbjct: 121 EERFKDAI 128

[89][TOP]
>UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens
           RepID=A6NFM0_HUMAN
          Length = 158

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/105 (41%), Positives = 66/105 (62%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE K+    DTK+  A  FT   EDHT+GN+++ QL  D   +FAG
Sbjct: 1   MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 60  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[90][TOP]
>UniRef100_UPI000187D7E2 hypothetical protein MPER_11952 n=1 Tax=Moniliophthora perniciosa
           FA553 RepID=UPI000187D7E2
          Length = 151

 Score = 90.5 bits (223), Expect = 9e-17
 Identities = 41/90 (45%), Positives = 60/90 (66%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP+RY  FVL +GER V+   DTK+ +AGT     +DHT+  +LR QL +    +FAG
Sbjct: 1   MNQPNRYELFVLDDGERPVEVTEDTKIPNAGTIKIVKQDHTLAGMLRAQLLSMPQVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435
           Y++PHPL P  ++K+QT+G+ + E  +  A
Sbjct: 61  YKVPHPLHPYFIIKIQTDGSITPEAILEQA 90

[91][TOP]
>UniRef100_C0NWN5 Polymerase II polypeptide J n=2 Tax=Ajellomyces capsulatus
           RepID=C0NWN5_AJECG
          Length = 168

 Score = 90.5 bits (223), Expect = 9e-17
 Identities = 43/135 (31%), Positives = 76/135 (56%)
 Frame = +1

Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
           F  +A  + ++ C     R  ++   R+  FVL  GE+KV+ + DT++     FTF  ED
Sbjct: 21  FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79

Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
           HT+GN++R +L      +F+GY++PHPL P  +++VQT+G  + ++A++ A  +L  +  
Sbjct: 80  HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139

Query: 463 IMLEEFDQAVSAASM 507
            +  EF +      M
Sbjct: 140 SLSREFTKEYELRKM 154

[92][TOP]
>UniRef100_A6R7X6 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Ajellomyces capsulatus NAm1 RepID=A6R7X6_AJECN
          Length = 168

 Score = 90.5 bits (223), Expect = 9e-17
 Identities = 43/135 (31%), Positives = 76/135 (56%)
 Frame = +1

Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
           F  +A  + ++ C     R  ++   R+  FVL  GE+KV+ + DT++     FTF  ED
Sbjct: 21  FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79

Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
           HT+GN++R +L      +F+GY++PHPL P  +++VQT+G  + ++A++ A  +L  +  
Sbjct: 80  HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139

Query: 463 IMLEEFDQAVSAASM 507
            +  EF +      M
Sbjct: 140 SLSREFTKEYELRKM 154

[93][TOP]
>UniRef100_A8PVS2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
           7966 RepID=A8PVS2_MALGO
          Length = 159

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 38/93 (40%), Positives = 62/93 (66%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N PDR+  F+L  GE++++ + D ++ +A TF F  EDHT+GN+LR  + A    +F GY
Sbjct: 3   NAPDRFTLFLLQPGEQRIEVQEDMRIPNAATFIFNKEDHTLGNMLRHAVLAQPGVLFCGY 62

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           ++PHPLEP ++VK+QT+G+ +  + +  A   L
Sbjct: 63  KVPHPLEPRVLVKIQTDGSLTPAEVLQQACTKL 95

[94][TOP]
>UniRef100_UPI000013CAF5 UPI000013CAF5 related cluster n=1 Tax=Homo sapiens
           RepID=UPI000013CAF5
          Length = 117

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLH-ADKSTVFA 342
           +N P  +  F+L EGE+K+    DTK+ +A  FT   EDHT+GN+++ Q    D   +FA
Sbjct: 1   VNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFA 60

Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           GY++PHPLE  ++++VQT    S ++A  +A+ DL +E  ++ E F
Sbjct: 61  GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 106

[95][TOP]
>UniRef100_Q4PC39 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4PC39_USTMA
          Length = 145

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 40/93 (43%), Positives = 63/93 (67%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N P+R+  F+L   E++V+   DTK+ +A TF F  EDHT+GN+LR  + A+ + +F GY
Sbjct: 3   NAPNRFDLFILGPDEKRVEIVEDTKIPNAATFWFNKEDHTLGNMLRHAVLANPAVLFCGY 62

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           ++PHPLEP + VK+QT+G+ +  DA+    + L
Sbjct: 63  KVPHPLEPKVFVKIQTDGSLTPTDALKQGSQKL 95

[96][TOP]
>UniRef100_A8NBN7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8NBN7_COPC7
          Length = 144

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 45/110 (40%), Positives = 68/110 (61%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P RY  FVL +GE+ V+   D+K+ +A T     +DHT+GN+LR QL A    +FAG
Sbjct: 1   MNAPARYELFVLEDGEKPVEVIEDSKIPNAATIKVVKQDHTLGNMLRSQLLAMPEVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
           Y++PHPL P  +VKVQT+G+ + + A+  A   L    + + ++F +  S
Sbjct: 61  YKVPHPLHPYFIVKVQTDGSITPQAAVEAACTKLIATINTVAQKFKREFS 110

[97][TOP]
>UniRef100_B0DBT6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0DBT6_LACBS
          Length = 150

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 42/110 (38%), Positives = 67/110 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P+RY  +VL +GE+ V+   DTK+ +A T     +DHT+GN+LR QL +    +FAG
Sbjct: 1   MNAPNRYELYVLEDGEKPVEITEDTKIPNAATIKIVKQDHTLGNMLRAQLLSMPQILFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
           Y++PHPL P  ++K+QT+GT + +  +  A   L      +  +F++  S
Sbjct: 61  YKVPHPLHPYFLIKIQTDGTITPQAILHQACTKLIGTMSSLETKFNREFS 110

[98][TOP]
>UniRef100_A7ELB7 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
           1980 UF-70 RepID=A7ELB7_SCLS1
          Length = 124

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 40/113 (35%), Positives = 67/113 (59%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N P+R+  F+L +GE+K   +ADT+  ++  FTF  EDHT+ N+LR  L  D   +F+GY
Sbjct: 3   NAPERFELFILGDGEKKCTEEADTRTPNSSIFTFNKEDHTLANMLRAHLLKDPHVIFSGY 62

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           +IPHPL     +++QT+G  + ++A++    +L +E  +   EF +      M
Sbjct: 63  KIPHPLFSKFELRIQTDGEITPKEALVACCRNLVSELEVFSREFTKEFELRKM 115

[99][TOP]
>UniRef100_A3BH10 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=A3BH10_ORYSJ
          Length = 135

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 41/90 (45%), Positives = 59/90 (65%)
 Frame = +1

Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393
           R V Y+ DTK+ +AG+FT   EDHTIGN+LRMQLH D + +FAGY++PHPL+  ++V+V 
Sbjct: 32  RWVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILVRVH 91

Query: 394 TNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           T    +   A   A+ DL  E   + + F+
Sbjct: 92  TANQSTPTQAYTQAINDLDKELENLKQAFE 121

[100][TOP]
>UniRef100_A8PTP7 RNA polymerase II., putative n=1 Tax=Brugia malayi
           RepID=A8PTP7_BRUMA
          Length = 133

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309
           MN P  +  F++ +GE+K+  + DTK+ +A  FT   EDHTIGNLL+             
Sbjct: 1   MNAPAPFESFLVFDGEKKIAIEKDTKVPNAAIFTVNKEDHTIGNLLKQFAAKIFHKSYFG 60

Query: 310 ----QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
               QL  D   +FAGY+ PHPLE   +++VQT    + EDA+  A+ DL  E  +  E 
Sbjct: 61  TFCSQLLKDPQVLFAGYKCPHPLEHKFILRVQTTSDTTPEDALTSAITDLMAELSLFEER 120

Query: 478 FDQAV 492
           F +A+
Sbjct: 121 FREAI 125

[101][TOP]
>UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR
          Length = 122

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 43/117 (36%), Positives = 69/117 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L + ++K+  + DTK+ +A  FT   EDHT+GN+L++QL  D   +FAG
Sbjct: 1   MNAPAAFESFLLLD-DKKIYIEKDTKVPNAAIFTINKEDHTLGNMLKIQLLKDPEVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516
           Y+ PHPLE  ++++VQT    +  DA+  A+ DL  E  ++    D A+   +   D
Sbjct: 60  YKNPHPLEHKILLRVQTTNATTPADALTTAITDLVGELSLLEHRIDSAIKKCTQSTD 116

[102][TOP]
>UniRef100_C5FYD6 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Microsporum
           canis CBS 113480 RepID=C5FYD6_NANOT
          Length = 161

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 41/109 (37%), Positives = 66/109 (60%)
 Frame = +1

Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360
           R+  FVL  GE+KV+ + DT++     FTF  EDHT+GN++R +L   +  +FAGY+IPH
Sbjct: 39  RFESFVLGPGEKKVEIEVDTRVPSTAIFTFNKEDHTLGNMIRARLLQSQHVLFAGYKIPH 98

Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           PL   ++++VQT+G  + +DA++ A  +L  +      EF +      M
Sbjct: 99  PLVHKVLLRVQTDGQITPKDAVLTACHELVKDLGTFSREFTKEYELRKM 147

[103][TOP]
>UniRef100_Q6CUB7 KLLA0C06160p n=1 Tax=Kluyveromyces lactis RepID=Q6CUB7_KLULA
          Length = 121

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/106 (39%), Positives = 63/106 (59%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LPEGE K+K + DTK   A   TF  EDHT+GNL+R +L  D+  +FA 
Sbjct: 1   MNAPDRFELFLLPEGESKLKVEQDTKASSAIIVTFEKEDHTLGNLIRAELLEDEGVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL     +++QT      +DA+ +A   + N+   +   F+
Sbjct: 61  YKVEHPLFAKFKMRIQTVEGYDPKDALKNACNSIINKLAQLQSNFE 106

[104][TOP]
>UniRef100_B8LZG9 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Talaromyces stipitatus ATCC 10500 RepID=B8LZG9_TALSN
          Length = 156

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/120 (36%), Positives = 69/120 (57%)
 Frame = +1

Query: 148 SA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
           SA   A+N P +   F+L EGE+K++ KADT+      FT   EDH++GNLLR +L  ++
Sbjct: 23  SAPPPAVNVPRKTESFILGEGEKKIEEKADTRTPSTSIFTLNKEDHSVGNLLRGRLLQNR 82

Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
              FA Y+IPHPL   + ++VQT+G  + ++A++ A  D   +   +  EF +      M
Sbjct: 83  HVTFAAYKIPHPLVHKVELRVQTDGEITPKEALLAACHDTVRDLGTLSREFTKEFELRKM 142

[105][TOP]
>UniRef100_B5X6K5 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Salmo salar
           RepID=B5X6K5_SALSA
          Length = 128

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/105 (38%), Positives = 61/105 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L EGE+K++ K  + + +   F    EDHT+GNLL   L A  +   AG
Sbjct: 1   MNAPDRFELFLLSEGEKKIEEKVYSGMSNTSDFVLNKEDHTLGNLLAEHLKAHPNVYMAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++ HP  P + +++QT+GTK+  D      E L N+   + +EF
Sbjct: 61  YKLGHPNVPQLFIRLQTDGTKTPRDVFTSVCEKLINQLESLHQEF 105

[106][TOP]
>UniRef100_Q6BLX4 DEHA2F09944p n=1 Tax=Debaryomyces hansenii RepID=Q6BLX4_DEBHA
          Length = 122

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/105 (39%), Positives = 61/105 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K+K   DTK+ +A       EDHT+GNL+R QL  D+  +FA 
Sbjct: 1   MNAPDRFELFILPDGVDKIKITPDTKVPNAALIKIEREDHTLGNLIRAQLLKDERVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++ HPL    V+++QT    S  +A+ +A   L  E  ++   F
Sbjct: 61  YKVEHPLFANFVLRIQTEDDYSPREALRNACSGLIGELDVIKTRF 105

[107][TOP]
>UniRef100_B9W6P5 DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=1
           Tax=Candida dubliniensis CD36 RepID=B9W6P5_CANDC
          Length = 124

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/106 (39%), Positives = 63/106 (59%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K+K   DTK+ +A       EDHT+ NLLR QL  D+  +FA 
Sbjct: 1   MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDERVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL    V++VQT    S  +A+ +A   L +E  ++  +F+
Sbjct: 61  YKVEHPLFANFVLRVQTEDDYSPREALQNACSSLISELDVIKSKFN 106

[108][TOP]
>UniRef100_Q75CF1 ACL005Cp n=1 Tax=Eremothecium gossypii RepID=Q75CF1_ASHGO
          Length = 122

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 40/106 (37%), Positives = 64/106 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LPEGE K+K + DTK  +A   TF  EDHT+GN++R +L  D+  +FA 
Sbjct: 1   MNAPDRFELFLLPEGESKLKIEPDTKAANAVIITFEKEDHTLGNIIRAELLEDERVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL     +++QT      ++A+ +A   + N+   +   F+
Sbjct: 61  YKVEHPLFARFRMRIQTAEGYDPKEALKNACNSIINKLATLKSNFE 106

[109][TOP]
>UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1
           Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE
          Length = 162

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 41/114 (35%), Positives = 67/114 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP+R   ++L + E+ +    D KL +A T   R +DHT+GN+LR QL  D + +FAG
Sbjct: 1   MNQPNRIDSWLLQDDEKPLTITEDPKLPNASTIVIRRQDHTLGNMLRAQLMLDPTVLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           Y++PHPLE  +++K+QT+   +  +A+  A  +L  +   +  +F Q      M
Sbjct: 61  YKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQFQQQAKNIEM 114

[110][TOP]
>UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis elegans RepID=RPB11_CAEEL
          Length = 122

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 42/117 (35%), Positives = 68/117 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L + ++K   + DTK+ +A  FT   EDHT+GN+L++QL  D   +FAG
Sbjct: 1   MNAPAAFESFLLLD-DKKFYIEKDTKVPNAAIFTIMKEDHTLGNMLKIQLLKDPEVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516
           Y+ PHPLE  +++++QT    +  DA+  A+ DL  E  ++    D A+   +   D
Sbjct: 60  YKNPHPLEHKILLRIQTTNNTTPADALTTAITDLVGELSLLEHRIDAAIKKCTQSGD 116

[111][TOP]
>UniRef100_Q6C7Q3 YALI0D26301p n=1 Tax=Yarrowia lipolytica RepID=Q6C7Q3_YARLI
          Length = 117

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 40/107 (37%), Positives = 63/107 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K++   DT++ +     F  EDHT+GNLLR QL  D   +FA 
Sbjct: 1   MNAPDRFELFLLPDGVPKLEVTPDTRIPNCANIKFEKEDHTLGNLLRSQLLHDSRVIFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           Y++ HPL    V+++QT    S ++A+ +A   L  +   + E+F +
Sbjct: 61  YKVEHPLFANFVLRIQTEDDYSPQEALTNACNALIRQLSDLQEKFQR 107

[112][TOP]
>UniRef100_C4YFG3 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Candida
           albicans RepID=C4YFG3_CANAL
          Length = 124

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 41/106 (38%), Positives = 62/106 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K+K   DTK+ +A       EDHT+ NLLR QL  D   +FA 
Sbjct: 1   MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDDRVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL    V+++QT    S  +A+ +A   L +E  ++  +F+
Sbjct: 61  YKVEHPLFANFVLRIQTEDDYSPREALQNACSGLISELDVIKSKFN 106

[113][TOP]
>UniRef100_A5DVI5 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1
           Tax=Lodderomyces elongisporus RepID=A5DVI5_LODEL
          Length = 121

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 41/107 (38%), Positives = 62/107 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K+K   DTK+ +A       EDHT+ NLLR QL  D   +FA 
Sbjct: 1   MNAPDRFELFILPDGVDKIKITPDTKVPNAAIIKIEREDHTLANLLRAQLLKDPRVIFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           Y++ HPL    V+++QT    + ++A+ +A   L NE   +  +F +
Sbjct: 61  YKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKFSE 107

[114][TOP]
>UniRef100_C6K0C3 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=9
           Tax=Pyretophorus RepID=C6K0C3_ANOAR
          Length = 85

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 38/84 (45%), Positives = 57/84 (67%)
 Frame = +1

Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           EGE+K+  + D K+ +A  FT   EDHT+GN++R QL  D + +FAGY++PHPLE   V+
Sbjct: 2   EGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVL 61

Query: 385 KVQTNGTKSCEDAMMHALEDLANE 456
           ++QT    S  +A M+A+ DL +E
Sbjct: 62  RIQTTSEYSPHEAFMNAITDLLSE 85

[115][TOP]
>UniRef100_C8ZHW0 Rpb11p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZHW0_YEAST
          Length = 120

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 41/106 (38%), Positives = 61/106 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L EGE K+K   DTK  +A   TF  EDHT+GNL+R +L  D+  +FA 
Sbjct: 1   MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HP      ++VQT      +DA+ +A   + N+   +   F+
Sbjct: 61  YKVEHPFFARFKLRVQTTEGYDPKDALKNACNSIINKLGALKTNFE 106

[116][TOP]
>UniRef100_A7TJW3 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TJW3_VANPO
          Length = 120

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 40/106 (37%), Positives = 63/106 (59%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PD++  F+L EGE K+  + DTK  +A   TF  EDHT+GNL+R +L  D   +FA 
Sbjct: 1   MNAPDKFELFLLGEGESKLNIEPDTKAPNAVVITFEKEDHTLGNLIRSELLNDSKVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL     +++QT      +DA+ +A  ++ N+  I+   F+
Sbjct: 61  YKVEHPLFARFKLRIQTVENYDPKDALKNACNNIINKLGILKTNFE 106

[117][TOP]
>UniRef100_P38902 DNA-directed RNA polymerase II subunit RPB11 n=4 Tax=Saccharomyces
           cerevisiae RepID=RPB11_YEAST
          Length = 120

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 40/106 (37%), Positives = 61/106 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L EGE K+K   DTK  +A   TF  EDHT+GNL+R +L  D+  +FA 
Sbjct: 1   MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HP      +++QT      +DA+ +A   + N+   +   F+
Sbjct: 61  YKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFE 106

[118][TOP]
>UniRef100_A3LX93 RNA polymerase II core subunit n=1 Tax=Pichia stipitis
           RepID=A3LX93_PICST
          Length = 122

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 40/105 (38%), Positives = 60/105 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+G  K+K   D+K+ +A       EDHT+ NLLR QL  D   +FA 
Sbjct: 1   MNAPDRFELFILPDGVDKIKITPDSKVPNAAIIKIEREDHTLANLLRAQLLKDPRVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           Y++ HPL    V+++QT    S  +A+ +A   L +E  ++   F
Sbjct: 61  YKVEHPLFANFVLRIQTEDDYSPREALKNACSGLISELDVIKNRF 105

[119][TOP]
>UniRef100_C5DEP5 KLTH0C10934p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DEP5_LACTC
          Length = 122

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 41/106 (38%), Positives = 62/106 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LPEGE K+K   DTK  +A   TF  EDHT+ NL+R +L  DK  +FA 
Sbjct: 1   MNAPDRFELFLLPEGEAKLKIDPDTKAPNAVIVTFEKEDHTLANLIRGELLEDKGVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL     +++QT      +DA+ +A   + ++   +   F+
Sbjct: 61  YKVEHPLFAQFKLRIQTVEGYDPKDALKNACNGIISKLGQLQSNFE 106

[120][TOP]
>UniRef100_C5DTD1 ZYRO0C07502p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5DTD1_ZYGRC
          Length = 122

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 40/106 (37%), Positives = 62/106 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L EGE K++   DTK  +A   TF  EDHT+GNL+R +L  D   +FA 
Sbjct: 1   MNAPDRFELFLLGEGESKLRVDPDTKAPNAIVVTFEKEDHTLGNLIRAELLNDPKVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HPL     +++QT      +DA+ +A   + N+  ++   F+
Sbjct: 61  YKVEHPLFARFKMRIQTMEGYDPKDALKNACNGIINKLGVLKTNFE 106

[121][TOP]
>UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F
          Length = 99

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 38/88 (43%), Positives = 57/88 (64%)
 Frame = +1

Query: 220 VKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTN 399
           +  + DTK+ +A  FT   EDHT+GN+LR QL  D   +FAGY++PHPLE   V++VQT 
Sbjct: 1   ITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTT 60

Query: 400 GTKSCEDAMMHALEDLANEYHIMLEEFD 483
              S ++A  +A+ DL +E  ++ E F+
Sbjct: 61  PDYSPQEAFTNAITDLISEISLLEERFN 88

[122][TOP]
>UniRef100_Q6FVE8 Strain CBS138 chromosome A complete sequence n=1 Tax=Candida
           glabrata RepID=Q6FVE8_CANGA
          Length = 120

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 40/106 (37%), Positives = 60/106 (56%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L EGE K+K   DTK  +A   TF  EDHT+GNL+R +L  D   +FA 
Sbjct: 1   MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDNKVLFAA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
           Y++ HP      +++QT      +DA+ +A   + N+   +   F+
Sbjct: 61  YKVEHPFFARFKLRIQTVEGYDPKDALRNACSSIINKLGALKSNFE 106

[123][TOP]
>UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4
           (RasGAP-activating-like protein 2) (Calcium-promoted Ras
           inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348
          Length = 763

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 36/92 (39%), Positives = 59/92 (64%)
 Frame = +1

Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
           ++    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAGY++PHPLE  ++++VQT
Sbjct: 664 RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 723

Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
               S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 724 TPDYSPQEAFTNAITDLISELSLLEERFRVAI 755

[124][TOP]
>UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus
           RepID=UPI00003AB60B
          Length = 100

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 36/92 (39%), Positives = 59/92 (64%)
 Frame = +1

Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
           ++    DTK+ +A  FT   EDHT+GN+++ QL  D   +FAGY++PHPLE  ++++VQT
Sbjct: 1   RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 60

Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
               S ++A  +A+ DL +E  ++ E F  A+
Sbjct: 61  TPDYSPQEAFTNAITDLISELSLLEERFRVAI 92

[125][TOP]
>UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J
           n=1 Tax=Taeniopygia guttata RepID=UPI000194D687
          Length = 113

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 36/86 (41%), Positives = 57/86 (66%)
 Frame = +1

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
           DTK+ +A  FT   EDHT+GN+++ QL  D   +FAGY++PHPLE  ++++VQT    S 
Sbjct: 20  DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 79

Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
           ++A  +A+ DL +E  ++ E F  A+
Sbjct: 80  QEAFTNAITDLISELSLLEERFRVAI 105

[126][TOP]
>UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1
           Tax=Pan troglodytes RepID=UPI0000E2167E
          Length = 262

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 36/86 (41%), Positives = 57/86 (66%)
 Frame = +1

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
           DTK+ +A  FT   EDHT+GN+++ QL  D   +FAGY++PHPLE  ++++VQT    S 
Sbjct: 169 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 228

Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
           ++A  +A+ DL +E  ++ E F  A+
Sbjct: 229 QEAFTNAITDLISELSLLEERFRVAI 254

[127][TOP]
>UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan
           troglodytes RepID=UPI0000E21685
          Length = 576

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/82 (42%), Positives = 55/82 (67%)
 Frame = +1

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
           DTK+ +A  FT   EDHT+GN+++ QL  D   +FAGY++PHPLE  ++++VQT    S 
Sbjct: 441 DTKVSNACLFTINKEDHTLGNIIKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 500

Query: 415 EDAMMHALEDLANEYHIMLEEF 480
           ++A  +A+ DL +E  ++ E F
Sbjct: 501 QEAFTNAITDLISELSLLEERF 522

[128][TOP]
>UniRef100_A9BKX6 Rpb11 n=1 Tax=Cryptophyta RepID=A9BKX6_9CRYP
          Length = 106

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/97 (40%), Positives = 59/97 (60%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N P+     VLPE  +K+ +  D K K+ G F    EDHT+G+L+  +L  +KS +F+GY
Sbjct: 3   NTPNALESLVLPETLQKITFYKDEKNKNCGYFKIEKEDHTLGHLIHSKLLKEKSVIFSGY 62

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEY 459
           + PHPLE  + +K+ T+G  S +DA    L+DL  E+
Sbjct: 63  KRPHPLEHFIYLKIITDGVFSPKDAFDSVLKDLYIEF 99

[129][TOP]
>UniRef100_Q9C256 Related to DNA-directed RNA polymerase 13.3K chain n=1
           Tax=Neurospora crassa RepID=Q9C256_NEUCR
          Length = 133

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 38/110 (34%), Positives = 64/110 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L +GE+K++ K  T + +   F    EDHT+GNLL   L      + AG
Sbjct: 1   MNAPDRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
           Y+I HP  P + +++QT+G+ +  +A++ A + L   Y  +  EF + ++
Sbjct: 61  YKIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 110

[130][TOP]
>UniRef100_B6K818 DNA-directed RNA polymerase II complex subunit Rpb11 n=1
           Tax=Schizosaccharomyces japonicus yFS275
           RepID=B6K818_SCHJY
          Length = 123

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 41/94 (43%), Positives = 57/94 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP+RY + +   G  KV Y+ DTK  +    T   EDHT+ N+LR QL  D+  VFAG
Sbjct: 1   MNQPERY-ELIELMGLPKVTYELDTKSPNTANITIEKEDHTLANMLRTQLLYDERVVFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           YR+PHPL    +++VQT    S + A++ A + L
Sbjct: 60  YRVPHPLNHNFILRVQTTEECSPKQAIIDASKSL 93

[131][TOP]
>UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5LKR8_9ALVE
          Length = 149

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
           N+PD      LPEG       ER++ Y+ + +  + GTFT   EDHT  + LR +L  ++
Sbjct: 12  NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71

Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
              FAGY++PHPLE  ++++VQ     +  +AM  AL+ L ++   + +EFD+++ A
Sbjct: 72  QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128

[132][TOP]
>UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5KDT1_9ALVE
          Length = 149

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
           N+PD      LPEG       ER++ Y+ + +  + GTFT   EDHT  + LR +L  ++
Sbjct: 12  NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71

Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
              FAGY++PHPLE  ++++VQ     +  +AM  AL+ L ++   + +EFD+++ A
Sbjct: 72  QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128

[133][TOP]
>UniRef100_B6AF09 RNA polymerase II subunit RPB11, putative n=1 Tax=Cryptosporidium
           muris RN66 RepID=B6AF09_9CRYT
          Length = 121

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 35/92 (38%), Positives = 59/92 (64%)
 Frame = +1

Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
           +VK++ ++++   G+F    EDHT+GNLLR QL  D S +FA Y++PHPLEP++ +++QT
Sbjct: 23  RVKWEVESRVPCCGSFMIMLEDHTLGNLLRTQLLRDPSVIFAAYKVPHPLEPMVQIRIQT 82

Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
             T +   AM +A++ +  E   +   F  A+
Sbjct: 83  RETTTPFVAMQNAIQMILAETQTVANTFKDAM 114

[134][TOP]
>UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=A3FPR0_CRYPV
          Length = 115

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 31/92 (33%), Positives = 60/92 (65%)
 Frame = +1

Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
           +V++K ++++   G+F    EDHT+GNL+  QL  D + +FAGY++PHPLEP++ +++QT
Sbjct: 17  RVQWKVESRVPCCGSFMIMLEDHTLGNLITTQLLRDPNVIFAGYKVPHPLEPLVQIRIQT 76

Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
               +   A+ +A++ +  E  ++L  F  ++
Sbjct: 77  RENTTPFVAIQNAIKSIQMESQVILNSFKDSM 108

[135][TOP]
>UniRef100_C6K0F4 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=1
           Tax=Anopheles gambiae RepID=C6K0F4_ANOGA
          Length = 79

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +1

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
           D K+ +A  FT   EDHT+GN++R QL  D + +FAGY++PHPLE   V+++QT    S 
Sbjct: 6   DMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSP 65

Query: 415 EDAMMHALEDLANE 456
            +A M A+ DL +E
Sbjct: 66  HEAFMXAITDLLSE 79

[136][TOP]
>UniRef100_C7YU34 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
           77-13-4 RepID=C7YU34_NECH7
          Length = 136

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 35/103 (33%), Positives = 57/103 (55%)
 Frame = +1

Query: 172 QPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYR 351
           Q   +  F+L +GE+K++ K  + + +   F  + EDHT+GNLL   L    +   AGY+
Sbjct: 12  QDSPFELFILDDGEKKIEEKVFSGMSNTSDFVLKKEDHTLGNLLSEHLKMHPNVYMAGYK 71

Query: 352 IPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           I HP  P + ++VQT+GT +  D      E L N+  ++ +EF
Sbjct: 72  IAHPNVPELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 114

[137][TOP]
>UniRef100_UPI0000F2E4EB PREDICTED: similar to RPB11a protein n=1 Tax=Monodelphis domestica
           RepID=UPI0000F2E4EB
          Length = 96

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 36/94 (38%), Positives = 54/94 (57%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN P  +  F+L EGE+K+     TK+  A  FT   EDH +GN+++ QL      +FAG
Sbjct: 1   MNAPLVFKSFLLFEGEKKIAINKHTKVPSACLFTINKEDHILGNIIKSQLLEAPQMLFAG 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           Y++P PLE   V+ +QT      ++  M+A+ DL
Sbjct: 61  YKVPDPLEHKTVIPIQTTPDYHSQETFMNAIPDL 94

[138][TOP]
>UniRef100_Q7RVT9 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7RVT9_NEUCR
          Length = 141

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 35/109 (32%), Positives = 64/109 (58%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           ++P+R+  F+L +GE+K++ K  T + +   F    EDHT+GNLL   L      + AGY
Sbjct: 10  SEPNRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAGY 69

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
           +I HP  P + +++QT+G+ +  +A++ A + L   Y  +  EF + ++
Sbjct: 70  KIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 118

[139][TOP]
>UniRef100_Q8ILU4 RNA polymerase small subunit, putative n=1 Tax=Plasmodium
           falciparum 3D7 RepID=Q8ILU4_PLAF7
          Length = 96

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 38/90 (42%), Positives = 54/90 (60%)
 Frame = +1

Query: 223 KYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNG 402
           KY  + K     TF F +EDHT+GN LR  L   +   FAGY +PHP +P + V++QT G
Sbjct: 5   KYYENLKNLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTG 64

Query: 403 TKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
            K   D +  +L+DL N   IML +F++A+
Sbjct: 65  -KPAIDILKESLDDLGNMCDIMLNKFNEAL 93

[140][TOP]
>UniRef100_A4R2Q3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
           RepID=A4R2Q3_MAGGR
          Length = 130

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+L  GE K+    +T + +   FTF+ EDHT+GN+L   L    + + AG
Sbjct: 1   MNAPDRFELFLLEPGEEKLTETINTSMSNTSDFTFKKEDHTLGNMLTEHLKQHPNVLMAG 60

Query: 346 YRIPHPLEPVMVVKVQTNG---TKSC-EDA---MMHALEDLANEY 459
           Y++ HP  P   +++QT+G    K+C  DA   ++H+L  +  E+
Sbjct: 61  YKVSHPNVPEFFLRIQTDGKVTPKACLLDACRTILHSLGQIRTEF 105

[141][TOP]
>UniRef100_UPI000023DEF8 hypothetical protein FG06818.1 n=1 Tax=Gibberella zeae PH-1
           RepID=UPI000023DEF8
          Length = 239

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 35/96 (36%), Positives = 54/96 (56%)
 Frame = +1

Query: 193 FVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEP 372
           F+L EGE+K++ K  + + +   F    EDHT+GNLL   L    +   AGY+I HP  P
Sbjct: 122 FLLGEGEKKIEEKVFSGMSNTSDFVLMKEDHTLGNLLSEHLKMHPNVHMAGYKIAHPNVP 181

Query: 373 VMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
            + ++VQT+GT +  D      E L N+  ++ +EF
Sbjct: 182 ELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 217

[142][TOP]
>UniRef100_B0E866 DNA-directed RNA polymerase II subunit RPB11, putative n=1
           Tax=Entamoeba dispar SAW760 RepID=B0E866_ENTDI
          Length = 112

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 38/108 (35%), Positives = 64/108 (59%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PD    +V+   E+K+  + +  +     FTF  EDHT GN+LR+ L  +   +FAG
Sbjct: 1   MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTFVKEDHTAGNILRVMLLRNPHVLFAG 57

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           YR PHPL  ++ + ++T+ T + + A+  A++D+ +E  IM  EF+ +
Sbjct: 58  YRQPHPLNYIIEMTIRTDTTITPKQALEQAMDDVIHEIEIMQNEFESS 105

[143][TOP]
>UniRef100_A0BUX3 Chromosome undetermined scaffold_13, whole genome shotgun sequence
           n=1 Tax=Paramecium tetraurelia RepID=A0BUX3_PARTE
          Length = 129

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 38/100 (38%), Positives = 57/100 (57%)
 Frame = +1

Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390
           E +V  + + K+ +A       EDHTIGNL RM L   K   F+GYR  HPL+  + +KV
Sbjct: 24  ESRVILEDEKKMNNACCVKLYLEDHTIGNLTRMNLLKQKEVTFSGYRQIHPLQHTIEIKV 83

Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
           QTNG+    DA+    +DL++E+  + EE+ + V+    H
Sbjct: 84  QTNGSIKPYDAIQKTFQDLSDEFKNLEEEWARKVAEKEKH 123

[144][TOP]
>UniRef100_P87123 DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Schizosaccharomyces pombe RepID=RPB11_SCHPO
          Length = 123

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 37/94 (39%), Positives = 57/94 (60%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MNQP+RY + +   G  KV Y+ D+K  +A   T   EDHT+ N+L  QL +D+  +FAG
Sbjct: 1   MNQPERY-ELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
           Y++PHPL    +++VQT    S +  ++ A + L
Sbjct: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSL 93

[145][TOP]
>UniRef100_C4LXS9 RNA polymerases II subunit, putative n=1 Tax=Entamoeba histolytica
           HM-1:IMSS RepID=C4LXS9_ENTHI
          Length = 112

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 39/108 (36%), Positives = 63/108 (58%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PD    +V+   E+K+  + +  +     FT   EDHT GN+LR+ L  +   +FAG
Sbjct: 1   MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTLVKEDHTAGNILRVMLLRNPHVLFAG 57

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           YR PHPL  V+ + ++T+ T + + A+  A++D+ +E  IM  EF+ A
Sbjct: 58  YRQPHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEFEAA 105

[146][TOP]
>UniRef100_Q4U9J3 RNA polymerases I and III subunit (RPC19 homologue), putative n=1
           Tax=Theileria annulata RepID=Q4U9J3_THEAN
          Length = 90

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF   +EDHT+GN LR  L      VFAGY +PHP+EP M +++QT G  + E   +  L
Sbjct: 12  TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNIRIQTTGQPAVE-VFLDCL 70

Query: 439 EDLANEYHIMLEEFDQAV 492
           +D+     I+ E+F++A+
Sbjct: 71  DDMVKICDILREKFEKAI 88

[147][TOP]
>UniRef100_Q4N286 RNA polymerase small subunit, putative n=1 Tax=Theileria parva
           RepID=Q4N286_THEPA
          Length = 92

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 33/78 (42%), Positives = 48/78 (61%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF   +EDHT+GN LR  L      VFAGY +PHP+EP M V++QT G  + E   +  L
Sbjct: 12  TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNVRIQTTGQPAVE-VFLDCL 70

Query: 439 EDLANEYHIMLEEFDQAV 492
           +D+     I+ E+F++A+
Sbjct: 71  DDMVKICDILTEKFEKAM 88

[148][TOP]
>UniRef100_Q4YZZ7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium berghei str. ANKA RepID=RPB11_PLABA
          Length = 126

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 34/78 (43%), Positives = 45/78 (57%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N+P+     VLP GE KVK +   K  D   FT + EDHTIGNL++  L  D    FA Y
Sbjct: 8   NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66

Query: 349 RIPHPLEPVMVVKVQTNG 402
           R PHPL+ V+ + ++  G
Sbjct: 67  RQPHPLQNVIEITIRPKG 84

[149][TOP]
>UniRef100_Q4N0T0 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
           RepID=Q4N0T0_THEPA
          Length = 133

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +1

Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
           S +N+P+      L +G +KV++  DT+    GTF    EDHT G+L+R +L  D    F
Sbjct: 6   SLINKPETADMVELAQGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRSKLSKDDRVTF 65

Query: 340 AGYRIPHPLEPVMVVKVQT 396
            GYR+PHPLE  + ++++T
Sbjct: 66  VGYRMPHPLENKLEIRIRT 84

[150][TOP]
>UniRef100_B6JWF5 DNA-directed RNA polymerase I and III subunit Rpc19 n=1
           Tax=Schizosaccharomyces japonicus yFS275
           RepID=B6JWF5_SCHJY
          Length = 123

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = +1

Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAG-TFTFRSEDHTIGNLLRMQLHADKSTV 336
           +AM     Y    L +G  KV   A         TF  + EDHT+GN LR  +  +    
Sbjct: 2   AAMTDVRDYGSITLDQGLEKVTILAGHSADYTSVTFQIQKEDHTLGNALRYMIMKNPDVE 61

Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
           F GY IPHP E  M +++QT  T +  DA+   L+DL +   ++ E F++ +S ++
Sbjct: 62  FCGYSIPHPSEAKMNLRIQTKSTTTAIDALKKGLDDLMDLCDVVTESFNEQLSEST 117

[151][TOP]
>UniRef100_Q4UD30 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria annulata
           RepID=Q4UD30_THEAN
          Length = 124

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 34/98 (34%), Positives = 56/98 (57%)
 Frame = +1

Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
           S +N+P+      L  G +KV++  DT+    GTF    EDHT G+L+R +L  D    F
Sbjct: 6   SLINKPETADMVELAHGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRTKLSKDDRVTF 65

Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLAN 453
            GYR+PHPLE  + ++++T  T +    ++ A+ ++ N
Sbjct: 66  VGYRMPHPLENKLEIRIRTK-TDNPFTVILSAITNIRN 102

[152][TOP]
>UniRef100_B3LAK8 RNA polymerase small subunit, putative n=1 Tax=Plasmodium knowlesi
           strain H RepID=B3LAK8_PLAKH
          Length = 94

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF F +EDHT+GN LR  L   +   FAGY +PHP +  + +++QT G +   + +  AL
Sbjct: 17  TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTG-EPAVNILKDAL 75

Query: 439 EDLANEYHIMLEEFDQAV 492
           +DL+N   IML +FD AV
Sbjct: 76  DDLSNICDIMLNKFDSAV 93

[153][TOP]
>UniRef100_Q4XS21 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium chabaudi RepID=RPB11_PLACH
          Length = 126

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/78 (42%), Positives = 44/78 (56%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N+P+     VLP GE KVK +   K  D   FT + EDHTIGNL++  L  D    FA Y
Sbjct: 8   NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66

Query: 349 RIPHPLEPVMVVKVQTNG 402
           R PHPL+  + + ++  G
Sbjct: 67  RQPHPLQNAIEITIRPKG 84

[154][TOP]
>UniRef100_C3YY41 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3YY41_BRAFL
          Length = 117

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKY----KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKST 333
           MN P  +  F+L EGE+K  +     AD +L         S+   I   +R QL  D   
Sbjct: 1   MNAPPTFESFLLFEGEKKSSFLATIDADARLVSV---LVASQILEIAKSIRQQLLKDPQV 57

Query: 334 VFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           +FAGY++PHPLE   V+++QT    S ++A  +A+ DL +E  ++ E F  AV
Sbjct: 58  IFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 110

[155][TOP]
>UniRef100_A4I2U7 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           infantum RepID=A4I2U7_LEIIN
          Length = 134

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +1

Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354
           PD  V   LP G+RK+  +    + ++  F    EDHT+ NLLRM+LH       AGYR+
Sbjct: 16  PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72

Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           PHP +  + ++VQT  NGT +   A   AL+D  N     LE F++
Sbjct: 73  PHPTKHNVELRVQTASNGTDAPVPAPKKALQDAINGCLKDLEVFEE 118

[156][TOP]
>UniRef100_C4R3Z5 RNA polymerase II subunit B12.5 n=1 Tax=Pichia pastoris GS115
           RepID=C4R3Z5_PICPG
          Length = 118

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 33/107 (30%), Positives = 56/107 (52%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           MN PDR+  F+LP+   K+K   D+++ +     F  EDHT+ NLLR +L       F  
Sbjct: 1   MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA 60

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           Y++ HPL    V+++QT      + A+  A   + N+   +  +F++
Sbjct: 61  YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNE 107

[157][TOP]
>UniRef100_Q4YUC7 RNA polymerase small subunit, putative n=1 Tax=Plasmodium berghei
           RepID=Q4YUC7_PLABE
          Length = 96

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 35/92 (38%), Positives = 54/92 (58%)
 Frame = +1

Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
           Y  + K     TF F +EDHT+GN LR  L   +   FAGY +PHP +  + +++QT G 
Sbjct: 6   YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTG- 64

Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
           K   + +  +L+DL+N   I+LE+F  A+ +A
Sbjct: 65  KPAINILKDSLDDLSNICTILLEKFKNALESA 96

[158][TOP]
>UniRef100_C1BN59 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caligus rogercresseyi RepID=C1BN59_9MAXI
          Length = 102

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 29/78 (37%), Positives = 48/78 (61%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF F+ E+HT+GN LR  +  +   +F GY IPHP E  M++++QT  +   +DA+   L
Sbjct: 23  TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMLLRIQTVSSVPTQDALRRGL 82

Query: 439 EDLANEYHIMLEEFDQAV 492
           EDL +   ++  +F+ A+
Sbjct: 83  EDLKDMCSVVSSKFNSAL 100

[159][TOP]
>UniRef100_B3LBL0 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
           strain H RepID=B3LBL0_PLAKH
          Length = 126

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N+P+     VLP GE+KV  +   K  D   FT + EDHTIGNL++  L  D    FA Y
Sbjct: 8   NKPENIDLLVLPPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPQVTFAAY 66

Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450
           R PHPL+  + + ++     G K   D +   L D++
Sbjct: 67  RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103

[160][TOP]
>UniRef100_B0YC94 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Aspergillus fumigatus A1163 RepID=B0YC94_ASPFC
          Length = 229

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 54/162 (33%)
 Frame = +1

Query: 184 YVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNLL 303
           +  FVL  GE KV+ + DT+                    +  +  FTF  EDHT+GNLL
Sbjct: 53  FESFVLSPGEEKVEVETDTRKFFNQTSRCKSTTTDLMHLGIPSSSIFTFNKEDHTLGNLL 112

Query: 304 RMQLHADKSTVFAGYR----------------------------------IPHPLEPVMV 381
           R +L  +   +FAGY+                                  +PHPL P   
Sbjct: 113 RSRLLQNSHVIFAGYKVCPPMEAVFSSILFEVLGAFLESFGMHGSDELSQVPHPLVPKFE 172

Query: 382 VKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
           ++VQT+G  + +DA++ A  DL  +  I+  EF +      M
Sbjct: 173 LRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 214

[161][TOP]
>UniRef100_C1E3U1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3U1_9CHLO
          Length = 100

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TFT + EDHT+GN +R  L+ +     AGY +PHP+E  + V+VQT G  +   AM  AL
Sbjct: 7   TFTLKDEDHTMGNAVRYMLNKNPQVSLAGYSVPHPMEKSVNVRVQTTGEVTATAAMRDAL 66

Query: 439 EDLANEYHIMLEEFDQAVS 495
            D+ +    + + FD AV+
Sbjct: 67  LDIISVCDHVHDTFDTAVA 85

[162][TOP]
>UniRef100_Q4FYG3 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           major strain Friedlin RepID=Q4FYG3_LEIMA
          Length = 134

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +1

Query: 208 GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVK 387
           G+RK+  +    + ++  F    EDHT+ NLLRM+LH       AGYR+PHP +  + ++
Sbjct: 24  GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELR 83

Query: 388 VQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           VQT  NGT +   A   AL+D  +     LE F++
Sbjct: 84  VQTASNGTDAPVPAPKKALQDAVDGCLKDLEVFEE 118

[163][TOP]
>UniRef100_C1BP53 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caligus rogercresseyi RepID=C1BP53_9MAXI
          Length = 102

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 29/78 (37%), Positives = 47/78 (60%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF F+ E+HT+GN LR  +  +   +F GY IPHP E  M +++QT  +   +DA+   L
Sbjct: 23  TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMPLRIQTVSSVPAQDALRRGL 82

Query: 439 EDLANEYHIMLEEFDQAV 492
           EDL +   ++  +F+ A+
Sbjct: 83  EDLKDMCSVVSSKFNSAL 100

[164][TOP]
>UniRef100_A5K177 RNA polymerase small subunit, putative n=1 Tax=Plasmodium vivax
           RepID=A5K177_PLAVI
          Length = 97

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF F +EDHT+GN LR  L   +   FAGY +PHP +  + +++QT G  +  + +  +L
Sbjct: 17  TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTGEPAI-NILKDSL 75

Query: 439 EDLANEYHIMLEEFDQAV 492
           +DL+N   IML +FD  V
Sbjct: 76  DDLSNICDIMLNKFDSVV 93

[165][TOP]
>UniRef100_C1N3U7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3U7_9CHLO
          Length = 109

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TFT + EDHT+GN +R  L+ +     AGY +PHP+E  + V+VQT G  +   AM  AL
Sbjct: 7   TFTLKDEDHTMGNAIRYMLNKNPQVALAGYSVPHPMERSVNVRVQTTGEVTATAAMRDAL 66

Query: 439 EDLANEYHIMLEEFDQAV 492
            D+ +    + + FD A+
Sbjct: 67  LDIISVCDHVHDTFDLAI 84

[166][TOP]
>UniRef100_Q4Y0J9 RNA polymerase small subunit, putative n=1 Tax=Plasmodium chabaudi
           RepID=Q4Y0J9_PLACH
          Length = 96

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 34/92 (36%), Positives = 54/92 (58%)
 Frame = +1

Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
           Y  + K     TF F +EDHT+GN LR  L   +   FAGY +PHP +  + +++QT G 
Sbjct: 6   YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTGE 65

Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
            +  + +  +L+DL+N   IML++F+ A+  A
Sbjct: 66  PAI-NILKDSLDDLSNICTIMLDKFNDALENA 96

[167][TOP]
>UniRef100_A4HFT2 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           braziliensis RepID=A4HFT2_LEIBR
          Length = 134

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +1

Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354
           PD  V   LP G+RK+  +    + ++  F    EDHT+ NLLRM+LH       AGYR+
Sbjct: 16  PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72

Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           PHP +  + ++VQT  NGT +   A   AL+D  +     LE F++
Sbjct: 73  PHPTKHNVELRVQTGSNGTDTPIPAPKKALQDAIDGCLKDLEMFEE 118

[168][TOP]
>UniRef100_B6HGB3 Pc20g11790 protein n=1 Tax=Penicillium chrysogenum Wisconsin
           54-1255 RepID=B6HGB3_PENCW
          Length = 137

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 30/79 (37%), Positives = 46/79 (58%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  + +  F GY IPHP +P M V++QTN T +  +A+  
Sbjct: 45  AASFQFEGEGHTMGNALRYAIMKNPAVEFCGYTIPHPSDPKMNVRIQTNDTTTALEALEK 104

Query: 433 ALEDLANEYHIMLEEFDQA 489
             +DL +   ++ E+F  A
Sbjct: 105 GFDDLMDLCDVVTEKFTAA 123

[169][TOP]
>UniRef100_Q4E3C1 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
           RepID=Q4E3C1_TRYCR
          Length = 133

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = +1

Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           +G RK+  +  +K+ ++  F    EDHT+ NLLRM+LH D     AGYR+PHP +  + +
Sbjct: 24  KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83

Query: 385 KVQTNG------TKSCEDAMMHALE 441
           +VQT+         S +DA++ A++
Sbjct: 84  RVQTSSDGSGRPIPSPKDALLKAID 108

[170][TOP]
>UniRef100_Q4DI42 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
           RepID=Q4DI42_TRYCR
          Length = 133

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = +1

Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           +G RK+  +  +K+ ++  F    EDHT+ NLLRM+LH D     AGYR+PHP +  + +
Sbjct: 24  KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83

Query: 385 KVQTNG------TKSCEDAMMHALE 441
           +VQT+         S +DA++ A++
Sbjct: 84  RVQTSSDGSGRPIPSPKDALLKAID 108

[171][TOP]
>UniRef100_Q0UWS5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0UWS5_PHANO
          Length = 203

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
 Frame = +1

Query: 181 RYVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNL 300
           R+  F+L +G++K++YK +T+                    + + G FTF  EDHT+GNL
Sbjct: 59  RFELFLLDDGQQKIEYKEETRKSTYHPALPSDTQANPTTLGVPNTGIFTFNKEDHTLGNL 118

Query: 301 LRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
           +  +L       F+ Y++PHPL     ++V T+G+ + +DA++     +  +   +   F
Sbjct: 119 ISQRLLKYPYITFSAYKVPHPLFATFELRVSTDGSITPKDAIIACCRQVVQDLEDLKRSF 178

[172][TOP]
>UniRef100_A5JZ41 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1
           Tax=Plasmodium vivax RepID=A5JZ41_PLAVI
          Length = 126

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N+P+     VL  GE+KV  +   K  D   FT + EDHTIGNL++  L  D    FA Y
Sbjct: 8   NKPENIDLLVLAPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPKVTFAAY 66

Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450
           R PHPL+  + + ++     G K   D +   L D++
Sbjct: 67  RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103

[173][TOP]
>UniRef100_C0PNM4 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0PNM4_MAIZE
          Length = 88

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQL 315
           MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT   EDHT+G+    Q+
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGSCTETQM 50

[174][TOP]
>UniRef100_A7TTT6 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TTT6_VANPO
          Length = 128

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 31/111 (27%), Positives = 60/111 (54%)
 Frame = +1

Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
           + + + D  ++  + E + K+  +A ++     +F    EDHT+GN LR  +  +    F
Sbjct: 15  TVIEEVDVEMESTVDEDKIKILPQATSEDGTCASFQIMDEDHTLGNALRYIIMKNPEVEF 74

Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
            GY IPHP E ++ +++QT G+ +  +A+   L DL +   ++ E+F Q +
Sbjct: 75  CGYSIPHPSENLLNLRIQTYGSTTAVEALQKGLGDLMDMCDVVEEKFTQRI 125

[175][TOP]
>UniRef100_Q22RW2 DNA-directed RNA polymerase I subunit D n=1 Tax=Tetrahymena
           thermophila SB210 RepID=Q22RW2_TETTH
          Length = 150

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = +1

Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390
           E K+    + K +   T+TF  EDHT+GN +R  L   K   F GY IPHP E  M +++
Sbjct: 46  EEKLVIDQNEKDRTCATYTFYDEDHTLGNTVRYMLVKRKDVEFCGYTIPHPSENKMNLRL 105

Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           QT   K+  + +   L+ LA    ++ ++FD A+
Sbjct: 106 QTI-KKNSNEVLKEGLDSLAGLCDVLNDKFDAAM 138

[176][TOP]
>UniRef100_A4YHV0 DNA-directed RNA polymerase subunit L n=1 Tax=Metallosphaera sedula
           DSM 5348 RepID=RPOL_METS5
          Length = 90

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 28/72 (38%), Positives = 47/72 (65%)
 Frame = +1

Query: 271 RSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLA 450
           + EDHT+GNL+  +L + K  + A Y +PHPL+  +V+K++T+GT S  +A+  A+ED+ 
Sbjct: 18  QGEDHTLGNLIAGRLRSVKGVILATYYLPHPLKDELVIKIKTDGTISPREALNRAIEDVK 77

Query: 451 NEYHIMLEEFDQ 486
                 L+E +Q
Sbjct: 78  VLGESFLDELEQ 89

[177][TOP]
>UniRef100_Q8IER7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium falciparum 3D7 RepID=RPB11_PLAF7
          Length = 126

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           N+P+     VL  GE+KV      K  D   F  + EDHTIGNL+++QL  D   +FA Y
Sbjct: 8   NKPETVDLLVLAPGEKKVTCTISDK-GDCNIFVIKLEDHTIGNLIKIQLCQDPKVLFAAY 66

Query: 349 RIPHPLEPVMVVKVQTNG 402
           R PHPL+  + + ++  G
Sbjct: 67  RQPHPLQNAIEITIKPKG 84

[178][TOP]
>UniRef100_Q01D46 Trithorax-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D46_OSTTA
          Length = 2007

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 232  ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK- 408
            A T      TFT   EDHT+GN LR  L+A+ S    GY  PHP+E  + V+VQT+G + 
Sbjct: 1912 APTAANAEATFTLEGEDHTLGNALRYVLNANPSVTLCGYSAPHPMERRVNVRVQTHGREG 1971

Query: 409  -SCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
             +   AM  AL D+ +    + E +++A  A
Sbjct: 1972 ATARGAMRDALLDVISVCDHVHESYEKAERA 2002

[179][TOP]
>UniRef100_A9SFX7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SFX7_PHYPA
          Length = 118

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF+   EDHT+GN LR  L+ D    F GY +PHP E  + V+VQT G  +  D +  AL
Sbjct: 13  TFSISDEDHTLGNSLRFVLNKDPRVAFCGYSVPHPSETRINVRVQTTGVPA-RDVLKDAL 71

Query: 439 EDL-------ANEYHIMLEEF--DQAVSAASMH*DAAAVTAEWRGGFKCP 561
            DL       +  ++  +E F  +Q V+  SM    + VT++  G  K P
Sbjct: 72  NDLMAMNQHVSTTFNRAVETFKANQGVNELSM---KSGVTSQHSGSVKKP 118

[180][TOP]
>UniRef100_C5KJH4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC
           50983 RepID=C5KJH4_9ALVE
          Length = 256

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 27/64 (42%), Positives = 43/64 (67%)
 Frame = +1

Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435
           GT+  ++EDHT+GN +R  L  +    FAGY +PHP EP + ++VQT    + +++M+ A
Sbjct: 9   GTYQLKNEDHTLGNSVRYVLAKNPKVDFAGYSVPHPNEPFVNIRVQTYPGMTADESMIWA 68

Query: 436 LEDL 447
           LE+L
Sbjct: 69  LEEL 72

[181][TOP]
>UniRef100_Q6C4D6 YALI0E27676p n=1 Tax=Yarrowia lipolytica RepID=Q6C4D6_YARLI
          Length = 140

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 30/83 (36%), Positives = 46/83 (55%)
 Frame = +1

Query: 247 KDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAM 426
           K A +F F  EDHTIGN L+  +  +    F GY IPHP E  + +++QT G  +  +A+
Sbjct: 52  KTACSFQFTEEDHTIGNALQYIIMKNPEVEFCGYSIPHPSEAKLNIRIQTYGDITAIEAL 111

Query: 427 MHALEDLANEYHIMLEEFDQAVS 495
              L+DL     ++  +F  AV+
Sbjct: 112 QKGLDDLIQACDVVKNKFTDAVT 134

[182][TOP]
>UniRef100_A3LQW8 RNA polymerase I and III subunit n=1 Tax=Pichia stipitis
           RepID=A3LQW8_PICST
          Length = 119

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 28/82 (34%), Positives = 48/82 (58%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  +  +A+  
Sbjct: 30  AASFQILEEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITAVEALHQ 89

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++LA    ++ ++F++ +SA
Sbjct: 90  GLDNLAELCTVIGDKFEEKISA 111

[183][TOP]
>UniRef100_A5DL81 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DL81_PICGU
          Length = 123

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A TF    EDHT+GN LR  +  +    F GY IPHP E  M +++QT G  S  +A+  
Sbjct: 34  AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+    ++  +F + +SA
Sbjct: 94  GLDNLSELCTVIETKFSEKISA 115

[184][TOP]
>UniRef100_C5DRN5 ZYRO0B09878p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5DRN5_ZYGRC
          Length = 130

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/108 (30%), Positives = 55/108 (50%)
 Frame = +1

Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
           ++PDR    +LP+        A ++     +F    EDHT+GN LR  +  +    F GY
Sbjct: 28  DEPDREKIKILPQ--------ATSEDGTCASFQIAEEDHTLGNALRYMIMKNPDVEFCGY 79

Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
            IPHP E ++ ++VQT G  +  D +   L+DL +    + ++F Q +
Sbjct: 80  SIPHPSENLLNIRVQTYGNVTAVDVLHKGLQDLMDLCDAVEDKFTQKI 127

[185][TOP]
>UniRef100_B2WFP6 RNA polymerase II subunit n=1 Tax=Pyrenophora tritici-repentis
           Pt-1C-BFP RepID=B2WFP6_PYRTR
          Length = 183

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = +1

Query: 157 RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTV 336
           ++ M   +R+  F+L EG++KV+ KA+T++ +   FTF  EDHT+GNLL  +L  + + +
Sbjct: 73  KADMGPANRFELFLLDEGQQKVEEKAETRVPNTAVFTFNKEDHTLGNLLSARLQKNPAIL 132

Query: 337 FAGYR 351
           FA Y+
Sbjct: 133 FAAYK 137

[186][TOP]
>UniRef100_A9NNU7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NNU7_PICSI
          Length = 107

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + TF F  EDHT+GN LR  L+ D    F GY IPHP +  + ++VQT G  + +D +  
Sbjct: 11  SSTFAFNDEDHTLGNSLRYVLNHDPRVEFCGYSIPHPSDNRVNIRVQTTGDPA-KDVLKD 69

Query: 433 ALEDLANEYHIMLEEFDQAV 492
           AL+DL      + + F +AV
Sbjct: 70  ALQDLMVVCQQVRQTFGKAV 89

[187][TOP]
>UniRef100_B9WL57 DNA-directed RNA polymerase subunit, common to RNA polymerases I
           and III, putative n=1 Tax=Candida dubliniensis CD36
           RepID=B9WL57_CANDC
          Length = 130

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  S  +A+  
Sbjct: 41  SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 100

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+     + ++FD+AV A
Sbjct: 101 GLDNLSELCSAIEDKFDEAVKA 122

[188][TOP]
>UniRef100_Q386T9 DNA-directed RNA polymerase II, putative n=2 Tax=Trypanosoma brucei
           RepID=Q386T9_9TRYP
          Length = 132

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = +1

Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393
           RK+  +  +K+ ++  F    EDHT+ NLLRM+LH +     AGYR+PHP +  + ++VQ
Sbjct: 26  RKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQ 85

Query: 394 T--NGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           T  +GT         AL +        LEEF+ A
Sbjct: 86  TSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGA 119

[189][TOP]
>UniRef100_B9PJ94 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1
           Tax=Toxoplasma gondii GT1 RepID=B9PJ94_TOXGO
          Length = 178

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/101 (35%), Positives = 52/101 (51%)
 Frame = +1

Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
           L  G  KV++  DT+    GTF F  ED+TIG ++R  L  D    F G R PHPLEP +
Sbjct: 19  LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78

Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
            +++QT  + S    ++ +L        ++   F  AV AA
Sbjct: 79  ELRIQT-VSSSPFTLVLESLRKRKAGLSLLKARFKAAVGAA 118

[190][TOP]
>UniRef100_P28000 DNA-directed RNA polymerases I and III subunit RPAC2 n=5
           Tax=Saccharomyces cerevisiae RepID=RPAC2_YEAST
          Length = 142

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = +1

Query: 202 PEGER-KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
           P+ E+ K+  +A ++   + +F    EDHT+GN LR  +  +    F GY IPHP E ++
Sbjct: 42  PDREKIKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLL 101

Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
            +++QT G  +  DA+   L+DL +   ++  +F + + +
Sbjct: 102 NIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIKS 141

[191][TOP]
>UniRef100_B6K9P6 RNA polymerase II subunit RPB11, putative n=2 Tax=Toxoplasma gondii
           RepID=B6K9P6_TOXGO
          Length = 178

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +1

Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
           L  G  KV++  DT+    GTF F  ED+TIG ++R  L  D    F G R PHPLEP +
Sbjct: 19  LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78

Query: 379 VVKVQT 396
            +++QT
Sbjct: 79  ELRIQT 84

[192][TOP]
>UniRef100_A7AT13 RNA polymerase small subunit protein, putative n=1 Tax=Babesia
           bovis RepID=A7AT13_BABBO
          Length = 96

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/77 (35%), Positives = 45/77 (58%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF+  +EDHT+GN +R  L   +   FAGY +PHP++P + +++QT G K      +  L
Sbjct: 12  TFSIENEDHTLGNAVRTLLVEREDVFFAGYSVPHPMQPEVNIRIQTTG-KPAVKIFVECL 70

Query: 439 EDLANEYHIMLEEFDQA 489
           +DL    +++ + F  A
Sbjct: 71  DDLVEVCNVLTKAFIDA 87

[193][TOP]
>UniRef100_A5DS75 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
           Tax=Lodderomyces elongisporus RepID=A5DS75_LODEL
          Length = 135

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
 Frame = +1

Query: 211 ERKVKYKADT------KLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTVFAGYRIPHPL 366
           E ++ Y AD        L+D  + +F+   EDHT+GN LR  +  +    F GY IPHP 
Sbjct: 24  EEEIIYDADKIRILPGSLEDGTSASFQILDEDHTLGNALRYMIMKNPEVEFCGYSIPHPS 83

Query: 367 EPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
           E  + V++QT G  S  +A+   L++L+    ++ E+F++
Sbjct: 84  ENKLNVRIQTYGNISAVEALHQGLDNLSELCDVVEEKFEE 123

[194][TOP]
>UniRef100_Q54ES6 DNA-directed RNA polymerases I and III subunit rpc19 n=1
           Tax=Dictyostelium discoideum RepID=RPC19_DICDI
          Length = 116

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 45/81 (55%)
 Frame = +1

Query: 250 DAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMM 429
           D  TF F  EDHT+GN L   L  +    F+GY IPHP +  M +++QT    + +++++
Sbjct: 34  DCATFIFTDEDHTLGNALHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKSNITAQESLL 93

Query: 430 HALEDLANEYHIMLEEFDQAV 492
             L D+ +    + E F+ A+
Sbjct: 94  QGLTDIKDISRHIFETFNNAL 114

[195][TOP]
>UniRef100_A4HGR0 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania
           braziliensis RepID=A4HGR0_LEIBR
          Length = 137

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 34/87 (39%), Positives = 46/87 (52%)
 Frame = +1

Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417
           T  +     TF  EDHT+GN LR  L  + +   AGY IPHPLEP M++ VQ   +    
Sbjct: 42  TDSESTAVVTFSHEDHTLGNPLRHVLMQNVAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99

Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSA 498
           +A+ H LE LA      +  FD+ + A
Sbjct: 100 EAVAHGLERLAEICDDTISSFDKCMVA 126

[196][TOP]
>UniRef100_Q6CIV1 KLLA0F23760p n=1 Tax=Kluyveromyces lactis RepID=Q6CIV1_KLULA
          Length = 127

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +1

Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTV 336
           A  Q D+  Q        K+K   +   +D  + +FR   EDHT+GN LR  +  +    
Sbjct: 13  AAEQNDQVDQVEEEVDSEKIKLLTEATSEDGTSASFRITDEDHTLGNTLRYMIMKNPEVE 72

Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           F GY IPHP E  + +++QT G  +  +A+   L DL +    + + F Q +
Sbjct: 73  FCGYSIPHPSENFLHIRIQTYGKITAVEALHKGLGDLMDMCDAVEDRFTQRI 124

[197][TOP]
>UniRef100_UPI000180B7C9 PREDICTED: similar to LOC494863 protein n=1 Tax=Ciona intestinalis
           RepID=UPI000180B7C9
          Length = 109

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 31/78 (39%), Positives = 45/78 (57%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF   +EDHT+GN LR  L  +    F GY IPHP E  M +++QT G  S  +A+   L
Sbjct: 25  TFIIHNEDHTLGNALRYILMKNPDIEFCGYSIPHPAENKMNLRIQTRGI-SATEALKKGL 83

Query: 439 EDLANEYHIMLEEFDQAV 492
           +DL +    +L+ F+ +V
Sbjct: 84  KDLNSVCEHILKTFESSV 101

[198][TOP]
>UniRef100_UPI000151BC99 hypothetical protein PGUG_04032 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151BC99
          Length = 123

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A TF    EDHT+GN LR  +  +    F GY IPHP E  M +++QT G  S  +A+  
Sbjct: 34  AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+    ++  +F + + A
Sbjct: 94  GLDNLSELCTVIETKFSEKILA 115

[199][TOP]
>UniRef100_Q755Q7 AFL220Cp n=1 Tax=Eremothecium gossypii RepID=Q755Q7_ASHGO
          Length = 135

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 27/77 (35%), Positives = 43/77 (55%)
 Frame = +1

Query: 262 FTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALE 441
           F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  +  DA+   L+
Sbjct: 56  FQITDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENFLNIRIQTYGKVTAVDALHKGLQ 115

Query: 442 DLANEYHIMLEEFDQAV 492
           DL +   ++ ++F Q +
Sbjct: 116 DLMDMCDVVEDKFTQRI 132

[200][TOP]
>UniRef100_Q59LT9 Potential RNA Polymerase I and III shared subunit Rpc19 n=1
           Tax=Candida albicans RepID=Q59LT9_CANAL
          Length = 131

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  S  +A+  
Sbjct: 42  SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 101

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+     + ++FD A+ A
Sbjct: 102 GLDNLSELCGAIEDKFDDAIKA 123

[201][TOP]
>UniRef100_Q0CH54 Putative uncharacterized protein n=1 Tax=Aspergillus terreus
           NIH2624 RepID=Q0CH54_ASPTN
          Length = 142

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 29/82 (35%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  T +  +A+  
Sbjct: 50  AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L+ L +   ++ E+F  A  A
Sbjct: 110 GLDSLMDLCDVVTEKFTDARDA 131

[202][TOP]
>UniRef100_C4YL76 DNA-directed RNA polymerases I and III 14 kDa polypeptide n=1
           Tax=Candida albicans RepID=C4YL76_CANAL
          Length = 133

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  S  +A+  
Sbjct: 44  SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 103

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+     + ++FD A+ A
Sbjct: 104 GLDNLSELCGAIEDKFDDAIKA 125

[203][TOP]
>UniRef100_B8C8G2 Small RNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8C8G2_THAPS
          Length = 83

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK-SCEDAMMHA 435
           TF    EDHT+GN LR  L  D    FAGY +PHP EPV+ ++VQTN    +  +A+  A
Sbjct: 4   TFVLGDEDHTLGNALRHVLINDARVDFAGYCVPHPSEPVVHLRVQTNEKPLTAIEALKEA 63

Query: 436 LEDLANEYHIMLEEFD 483
              L+ +    LE+ +
Sbjct: 64  CSTLSKQCDFFLEQLE 79

[204][TOP]
>UniRef100_Q4PFC9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4PFC9_USTMA
          Length = 164

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A TF  + EDHT+GN LR  +  D    F GY  PHP E  + +++Q     S  DA+  
Sbjct: 33  AVTFCLKEEDHTLGNSLRYIIMKDPRVEFCGYSNPHPSENKIHLRIQMYDNASALDALRD 92

Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504
           A+E+L   +  + E +D+++SA +
Sbjct: 93  AIENLDQLFAAIGEAYDRSLSAGN 116

[205][TOP]
>UniRef100_C0NZW5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Ajellomyces capsulatus G186AR RepID=C0NZW5_AJECG
          Length = 137

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 30/82 (36%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  T +    +  
Sbjct: 49  AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L+DL N    + E F +A +A
Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130

[206][TOP]
>UniRef100_B8MSM4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MSM4_TALSN
          Length = 136

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 30/98 (30%), Positives = 53/98 (54%)
 Frame = +1

Query: 196 VLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPV 375
           V+  GE ++   +    + A +F F+ E HT+GN LR  +  + +  F GY IPHP E  
Sbjct: 26  VIEHGENRITILSGAT-ETAASFQFKEEGHTLGNALRYVIMKNPAVEFCGYTIPHPSEAK 84

Query: 376 MVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
           M +++QT    +  +A+   L+DL +   ++ ++F  A
Sbjct: 85  MNLRIQTYENTTAIEALEKGLDDLMDLCDVVTDKFTVA 122

[207][TOP]
>UniRef100_A6RF11 Predicted protein n=1 Tax=Ajellomyces capsulatus NAm1
           RepID=A6RF11_AJECN
          Length = 137

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 30/82 (36%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  T +    +  
Sbjct: 49  AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L+DL N    + E F +A +A
Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130

[208][TOP]
>UniRef100_UPI00003BD255 hypothetical protein DEHA0A13409g n=1 Tax=Debaryomyces hansenii
           CBS767 RepID=UPI00003BD255
          Length = 134

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 28/82 (34%), Positives = 45/82 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  S  +A+  
Sbjct: 45  AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 104

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+     + E+F + + A
Sbjct: 105 GLDNLSELCSTIEEKFSEKIEA 126

[209][TOP]
>UniRef100_Q2HQ74 RNA polymerase I subunit RPC19 n=1 Tax=Trypanosoma brucei brucei
           RepID=Q2HQ74_TRYBB
          Length = 134

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 40/113 (35%), Positives = 58/113 (51%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           +N+ D        + E  ++  AD++   A T TF  EDHT+GN LR  +  D S   AG
Sbjct: 19  LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
           Y IPHPLE  M + VQ+  ++   + +   LE LA      L++F+  V A S
Sbjct: 77  YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKKFNACVEAIS 127

[210][TOP]
>UniRef100_B6KBV3 DNA-directed RNA polymerases I and III subunit RPAC2, putative n=3
           Tax=Toxoplasma gondii RepID=B6KBV3_TOXGO
          Length = 129

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TFT   EDHT+GN +R  L       FAGY +PHP +P M +++QT G +S    +  + 
Sbjct: 38  TFTLTGEDHTLGNTIRSILVRKPGVEFAGYSVPHPTQPEMNIRLQTTG-ESAMQLLRESF 96

Query: 439 EDLANEYHIMLEEFDQAV 492
           +DLA+    +   +D+A+
Sbjct: 97  DDLASICDHLDTLYDEAL 114

[211][TOP]
>UniRef100_Q6BY26 DEHA2A12980p n=1 Tax=Debaryomyces hansenii RepID=Q6BY26_DEBHA
          Length = 129

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 28/82 (34%), Positives = 45/82 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  S  +A+  
Sbjct: 40  AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 99

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L++L+     + E+F + + A
Sbjct: 100 GLDNLSELCSTIEEKFSEKIEA 121

[212][TOP]
>UniRef100_B2VVA3 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Pyrenophora tritici-repentis Pt-1C-BFP
           RepID=B2VVA3_PYRTR
          Length = 126

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +H +    F GY IPHP E  M +++QT    S    +  
Sbjct: 38  AASFQFDDEDHTLGNALRYIIHKNPDVEFCGYSIPHPSEAKMNLRIQTYDGASVYTVLEK 97

Query: 433 ALEDL-------ANEYHIMLEEF 480
            LEDL         +Y I  +EF
Sbjct: 98  GLEDLMAMCDIVEQKYTIARDEF 120

[213][TOP]
>UniRef100_A1CM75 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Aspergillus clavatus RepID=A1CM75_ASPCL
          Length = 142

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/82 (35%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  T +  +A+  
Sbjct: 50  AASFQFEGEGHTLGNALRYTIMKNPEVEFCGYTIPHPSEAKMNLRIQTYDTTNAVEALEK 109

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            LE L +   ++ ++F  A  A
Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131

[214][TOP]
>UniRef100_UPI0001924FE8 PREDICTED: similar to polymerase (RNA) I polypeptide D, 16kDa n=1
           Tax=Hydra magnipapillata RepID=UPI0001924FE8
          Length = 127

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF F +EDHTIGN LR  +  +    + GY  PHP EP + +++QT+   +  DA+   L
Sbjct: 28  TFVFHNEDHTIGNSLRYMIMKNPEVQYCGYSNPHPSEPKINLRIQTHKI-AAPDALQKGL 86

Query: 439 EDLANEYHIMLEEFDQAV 492
            DL N    +L  F ++V
Sbjct: 87  LDLQNVCDHVLATFQKSV 104

[215][TOP]
>UniRef100_UPI00017F079B PREDICTED: similar to DNA-directed RNA polymerases I and III
           subunit RPAC2 (RNA polymerases I and III subunit AC2)
           (DNA-directed RNA polymerase I subunit D) (DNA-directed
           RNA polymerase I 16 kDa polypeptide) (RPA16) (RPC16)
           (hRPA19) (AC19) n=1 Tax=Sus scrofa RepID=UPI00017F079B
          Length = 133

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
 Frame = +1

Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
           + EGERK   +   A    +   TF    EDHT+GN LR  +  +    F GY   HP E
Sbjct: 18  MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77

Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
             + +++QT G     +     L +L N    +L++F+ ++ A   H
Sbjct: 78  SKINLRIQTRGALPAVEPFQRGLTELMNVCQHVLDKFEASIKAYKDH 124

[216][TOP]
>UniRef100_D0A874 DNA-dependent RNA polymerases, putative n=2 Tax=Trypanosoma brucei
           RepID=D0A874_TRYBG
          Length = 134

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 40/113 (35%), Positives = 57/113 (50%)
 Frame = +1

Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
           +N+ D        + E  ++  AD++   A T TF  EDHT+GN LR  +  D S   AG
Sbjct: 19  LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76

Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
           Y IPHPLE  M + VQ+  ++   + +   LE LA      L+ F+  V A S
Sbjct: 77  YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKSFNACVEAIS 127

[217][TOP]
>UniRef100_Q6FLF2 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida
           glabrata RepID=Q6FLF2_CANGA
          Length = 137

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           +F    EDHT+GN LR  +  +    F GY IPHP E ++ +++QT G  +  DA+   L
Sbjct: 58  SFQIAQEDHTLGNALRYIIMKNPEVEFCGYSIPHPSEELLNLRIQTYGNITAVDALQKGL 117

Query: 439 EDLANEYHIMLEEFDQAVSA 498
           +DL +    + ++F Q + +
Sbjct: 118 DDLIDLCDAVKDKFVQRLQS 137

[218][TOP]
>UniRef100_B3S798 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax
           adhaerens RepID=B3S798_TRIAD
          Length = 92

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/88 (29%), Positives = 46/88 (52%)
 Frame = +1

Query: 229 KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK 408
           KA +  +D  TF    E+HT+GN +R  +  +  T   GY +PHP +  + ++++TN  K
Sbjct: 2   KASSNRQDCQTFVLHGENHTLGNAVRYLIMKNPETKLCGYSVPHPSQHKINLRIETNNEK 61

Query: 409 SCEDAMMHALEDLANEYHIMLEEFDQAV 492
              +     L+DL      +L+ FD ++
Sbjct: 62  DAIEVFRTGLQDLDQVCDHVLKTFDVSI 89

[219][TOP]
>UniRef100_C6HHU3 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces
           capsulatus H143 RepID=C6HHU3_AJECH
          Length = 137

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  T +    +  
Sbjct: 49  AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108

Query: 433 ALEDLANEYHIMLEEFDQA 489
            L+DL N    + E F +A
Sbjct: 109 GLDDLMNLCDTVTETFIEA 127

[220][TOP]
>UniRef100_Q9Y2S0 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Homo
           sapiens RepID=RPAC2_HUMAN
          Length = 133

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = +1

Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
           + EGERK   +   A    +   TF    EDHT+GN LR  +  +    F GY   HP E
Sbjct: 18  MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77

Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
             + +++QT GT    +     L +L N    +L++F+ ++
Sbjct: 78  SKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASI 118

[221][TOP]
>UniRef100_C5YTE8 Putative uncharacterized protein Sb08g005640 n=1 Tax=Sorghum
           bicolor RepID=C5YTE8_SORBI
          Length = 108

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + TF+   EDHT+ N +R  L+ D    F GY IPHP E  + ++VQT G  + +D +  
Sbjct: 11  SSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTGDPA-KDVLKD 69

Query: 433 ALEDL 447
           AL+DL
Sbjct: 70  ALQDL 74

[222][TOP]
>UniRef100_Q2QWI0 Os12g0194700 protein n=2 Tax=Oryza sativa RepID=Q2QWI0_ORYSJ
          Length = 108

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A TF+   EDHT+ N +R  L+ D    F GY IPHP +  + ++VQT G  + +D +  
Sbjct: 11  ASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTGDPA-KDVLKD 69

Query: 433 ALEDLANEYHIMLEEFDQAVS 495
           +L+DL      +   FD AV+
Sbjct: 70  SLQDLMVMCQHVRGTFDTAVT 90

[223][TOP]
>UniRef100_Q1RMG8 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Bos
           taurus RepID=RPAC2_BOVIN
          Length = 133

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = +1

Query: 187 VQFVLPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIP 357
           V+  + EGERK   +   A    +   TF    EDHT+GN LR  +  +    F GY   
Sbjct: 14  VKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTT 73

Query: 358 HPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
           HP E  + +++QT G     +     L DL N    +L++F+ ++
Sbjct: 74  HPSESKINLRIQTRGALPAVEPFQRGLTDLMNVCQHVLDKFEASI 118

[224][TOP]
>UniRef100_A7NYN7 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYN7_VITVI
          Length = 105

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 42/78 (53%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF+   EDHT+ N +R  L+ D    F GY IPHP +  + ++VQT G  S  + +  A 
Sbjct: 13  TFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG-DSAREVLKDAC 71

Query: 439 EDLANEYHIMLEEFDQAV 492
           +DL      +   FD+AV
Sbjct: 72  QDLMLMCQHVRSTFDKAV 89

[225][TOP]
>UniRef100_Q2H911 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
           RepID=Q2H911_CHAGB
          Length = 155

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 41/76 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F +E HT+GN LR  +  +    F  Y IPHP EP M V++QT    +  +A+  
Sbjct: 70  AASFEFLNEGHTLGNALRYIIMKNPDVEFCAYAIPHPSEPKMNVRIQTFDGTTAVEALEK 129

Query: 433 ALEDLANEYHIMLEEF 480
            L DL     ++ +EF
Sbjct: 130 GLRDLQELCDVVTDEF 145

[226][TOP]
>UniRef100_C9SPR1 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Verticillium albo-atrum VaMs.102 RepID=C9SPR1_9PEZI
          Length = 146

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           E E +++ +       A +F F++E HT+GN LR  +  +    F  Y IPHP E +M +
Sbjct: 42  EEEEELEQRLPGSTDTAASFEFKAEGHTLGNALRYIIMKNPDVEFCAYSIPHPSEDLMNI 101

Query: 385 KVQT-NGTKSCEDAMMHALEDLANEYHIMLEEF 480
           ++QT +GT     A+   L+DL     +M +EF
Sbjct: 102 RIQTYDGT--AVSALSKGLKDLQGLCDVMTDEF 132

[227][TOP]
>UniRef100_A1DLU8 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Neosartorya fischeri NRRL 181 RepID=A1DLU8_NEOFI
          Length = 142

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  + +  +A+  
Sbjct: 50  AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYDSTTAVEALEK 109

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            LE L +   ++ ++F  A  A
Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131

[228][TOP]
>UniRef100_C6LR48 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
           Tax=Giardia intestinalis ATCC 50581 RepID=C6LR48_GIALA
          Length = 95

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/82 (31%), Positives = 47/82 (57%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF   +EDHT+GN +R  L+ +    FAGY +PHP EP + +++Q++  +S  D ++ A 
Sbjct: 7   TFVIVNEDHTLGNCIRYCLNCNPDVSFAGYSVPHPAEPKLNLRIQSD-IRSATDCLLQAA 65

Query: 439 EDLANEYHIMLEEFDQAVSAAS 504
           + + N   ++ +   +    AS
Sbjct: 66  DLMYNIASVLRQRLAEVYEDAS 87

[229][TOP]
>UniRef100_C8V0U1 DNA-directed RNA polymerase I and III 14 kDa polypeptide
           (AFU_orthologue; AFUA_6G04610) n=2 Tax=Emericella
           nidulans RepID=C8V0U1_EMENI
          Length = 137

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  + +  +A+  
Sbjct: 45  AASFQFEGEGHTLGNALRFAIMKNPEVEFCGYTIPHPSESKMNIRIQTYDSTTAVEALEK 104

Query: 433 ALEDLANEYHIMLEEFDQA 489
            L+ L +   ++ ++F  A
Sbjct: 105 GLDTLMDLCDVVTDKFTAA 123

[230][TOP]
>UniRef100_C5JYX4 Predicted protein n=2 Tax=Ajellomyces dermatitidis
           RepID=C5JYX4_AJEDS
          Length = 142

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  T +  + +  
Sbjct: 54  AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTNVFEVLEK 113

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
             +DL +    + E F +A +A
Sbjct: 114 GFDDLMDLCDTVTETFMEAKNA 135

[231][TOP]
>UniRef100_C4Y1Z9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y1Z9_CLAL4
          Length = 154

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F    EDHT+GN LR  +  +    F GY IPHP E  + +++QT G  +  +A+  
Sbjct: 65  AASFQVLDEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITALEALHQ 124

Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504
            L++L+     + E F + V A +
Sbjct: 125 GLDNLSELCTHVEETFTEKVDAGN 148

[232][TOP]
>UniRef100_B8NDQ0 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Aspergillus flavus NRRL3357 RepID=B8NDQ0_ASPFN
          Length = 142

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 42/76 (55%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  T +  +A+  
Sbjct: 50  AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109

Query: 433 ALEDLANEYHIMLEEF 480
            L+ L +   ++ ++F
Sbjct: 110 GLDSLMDLCDVVTDKF 125

[233][TOP]
>UniRef100_A2R4K1 Contig An15c0040, complete genome n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R4K1_ASPNC
          Length = 153

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 43/79 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  E HT+GN LR  +  +    F GY IPHP E  M +++QT  T +  +A+  
Sbjct: 61  AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYETTTAVEALEK 120

Query: 433 ALEDLANEYHIMLEEFDQA 489
            L+ L +   ++ ++F  A
Sbjct: 121 GLDTLMDLCDVVTDKFTTA 139

[234][TOP]
>UniRef100_Q09177 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPAC2_SCHPO
          Length = 125

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
           TF  + EDHT+GN LR  +  +    F GY IPHP E  M  ++QT  + +  D +   L
Sbjct: 36  TFQIQKEDHTLGNSLRYVIMKNPEVEFCGYSIPHPSEAKMNFRIQTAPSTTAVDVLRKGL 95

Query: 439 EDLANEYHIMLEEFDQ 486
           +DL +    + E+F +
Sbjct: 96  DDLIDLCDAVTEKFTE 111

[235][TOP]
>UniRef100_C5Y1Q7 Putative uncharacterized protein Sb05g008640 n=1 Tax=Sorghum
           bicolor RepID=C5Y1Q7_SORBI
          Length = 107

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 44/95 (46%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           + TF+   EDHT+ N  R  L+ D    F GY IPHP E  + ++VQT G     DA   
Sbjct: 11  SSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG-----DAAKD 65

Query: 433 ALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537
            L+D      IM +     +  A  +  A   TAE
Sbjct: 66  VLKDALQNLMIMCQHVRGTLDNAVANHRAKNTTAE 100

[236][TOP]
>UniRef100_B7FZW0 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FZW0_PHATR
          Length = 89

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
 Frame = +1

Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT--------NGTKSC 414
           TF    EDHT+GN +R  L  + S  FAGY +PHP EPV+ ++VQT            + 
Sbjct: 4   TFCIGDEDHTLGNAVRHVLIRNNSIGFAGYSVPHPSEPVVQIRVQTVAPAGSRGQQPPTA 63

Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
             A+  A + L ++  I+LE  ++ +
Sbjct: 64  TGALKTACQTLYDQCDIVLERLEELI 89

[237][TOP]
>UniRef100_A4I3T4 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania
           infantum RepID=A4I3T4_LEIIN
          Length = 137

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 48/100 (48%)
 Frame = +1

Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417
           T  +     TF  EDHT+GN LR  L  + +   AGY IPHPLEP M++ VQ   +    
Sbjct: 42  TDNESTAVVTFSHEDHTLGNPLRHVLMQNAAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99

Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537
           +A+   LE LA      +  FD  +     H  AAA   E
Sbjct: 100 EAVAKGLERLAEICDDTISSFDNCM--VEQHRMAAATQPE 137

[238][TOP]
>UniRef100_A0DTF6 Chromosome undetermined scaffold_63, whole genome shotgun sequence
           n=1 Tax=Paramecium tetraurelia RepID=A0DTF6_PARTE
          Length = 122

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +1

Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT-NGTKSCEDAMMH 432
           GTF F  EDHT+GN LR  L    +  F GY +PHP E  M +++QT N TK  E  M  
Sbjct: 42  GTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVNETK--EKVMND 99

Query: 433 ALEDLANEYHIMLEEFDQAV 492
            L+ L+    I+ ++F QA+
Sbjct: 100 GLKCLSQICDIIEDKFKQAL 119

[239][TOP]
>UniRef100_C5P253 DNA-directed RNA polymerases I and III 16 kDa polypeptide, putative
           n=1 Tax=Coccidioides posadasii C735 delta SOWgp
           RepID=C5P253_COCP7
          Length = 145

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  + +  + +  
Sbjct: 57  AASFQFEGEDHTLGNALRYIIMKNPDVEFCGYTMPHPSETKMNLRIQTYASTNVFEVLDK 116

Query: 433 ALEDLANEYHIMLEEFDQA 489
            L DL +   ++ E F  A
Sbjct: 117 GLSDLIDLCDVVTETFTTA 135

[240][TOP]
>UniRef100_B8P7Q9 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R
           RepID=B8P7Q9_POSPM
          Length = 89

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHA-DKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
           DTK+ +A T     +DHT+GNL+R      D +     Y++PHPL+P  ++K+QT+GT
Sbjct: 4   DTKIPNAATIKVLKQDHTLGNLIRAYTTVVDAANFVCRYKVPHPLQPHFLIKIQTDGT 61

[241][TOP]
>UniRef100_B6QVD5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Penicillium marneffei ATCC 18224 RepID=B6QVD5_PENMQ
          Length = 135

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F+ E HT+GN LR  +  +    F GY IPHP E  M +++QT    +  +A+  
Sbjct: 43  AASFQFKEEGHTLGNALRYVIMKNPKVEFCGYTIPHPSEAKMNLRIQTYDDTTAIEALEK 102

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L DL +   ++ ++F  A  A
Sbjct: 103 GLNDLMDLCDVVSDKFTVARDA 124

[242][TOP]
>UniRef100_UPI00006D2CA2 PREDICTED: polymerase (RNA) I polypeptide D, 16kDa n=1 Tax=Macaca
           mulatta RepID=UPI00006D2CA2
          Length = 133

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = +1

Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
           + EGERK   +   A    +   TF    EDHT+GN LR  +  +    F GY   HP E
Sbjct: 18  MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77

Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
             + +++QT GT    +     L +L +    +L++F+ ++
Sbjct: 78  SKINLRIQTRGTLPAVEPFQRGLNELMSVCQHVLDKFEASI 118

[243][TOP]
>UniRef100_UPI00004BE302 UPI00004BE302 related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI00004BE302
          Length = 133

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
 Frame = +1

Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
           + EGERK   +   A    +   TF    EDHT+GN LR  +  +    F GY   HP E
Sbjct: 18  MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77

Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
             + +++QT G     +     L +L N    +L++F+ ++
Sbjct: 78  SKINLRIQTRGALPAVEPFQRGLNELMNVCQHVLDKFEASI 118

[244][TOP]
>UniRef100_Q4DBQ7 DNA-directed RNA polymerase I/III subunit, putative n=1
           Tax=Trypanosoma cruzi RepID=Q4DBQ7_TRYCR
          Length = 134

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +1

Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           E+KV+ +    T  +   T  F  EDHT+GN LR  L  ++    AGY IPHPLE  M++
Sbjct: 30  EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89

Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
            VQ+  T    +A+   LE LA+     L+ F+  +
Sbjct: 90  HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123

[245][TOP]
>UniRef100_Q4D7H8 DNA-dependent RNA polymerases, putative n=1 Tax=Trypanosoma cruzi
           RepID=Q4D7H8_TRYCR
          Length = 134

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +1

Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
           E+KV+ +    T  +   T  F  EDHT+GN LR  L  ++    AGY IPHPLE  M++
Sbjct: 30  EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89

Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
            VQ+  T    +A+   LE LA+     L+ F+  +
Sbjct: 90  HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123

[246][TOP]
>UniRef100_A8QGH1 Probable DNA-directed RNA polymerases I/III 16 kDa polypeptide,
           putative n=1 Tax=Brugia malayi RepID=A8QGH1_BRUMA
          Length = 113

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = +1

Query: 199 LPEGERKVKY-KADTKLKDAGTFT--FRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
           L + ERKV+    D+   D    T     EDHTIGN L+  L   +   F GY +PHPLE
Sbjct: 4   LLDSERKVEILDVDSFRSDPSNLTVILYEEDHTIGNSLKHVLCKMRDVEFCGYNVPHPLE 63

Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
             +++++QT    S    +M   E+L   +  + ++FD +
Sbjct: 64  DKILIRLQTKRGVSAASMLMKGFEELECIFASIRQKFDSS 103

[247][TOP]
>UniRef100_C5FRW4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Microsporum canis CBS 113480 RepID=C5FRW4_NANOT
          Length = 144

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = +1

Query: 244 LKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDA 423
           ++ A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  + +    
Sbjct: 52  VETAASFQFEGEDHTLGNALRYVIMKNPDVEFCGYTMPHPSEAKMNLRIQTYDSTNVFTV 111

Query: 424 MMHALEDLANEYHIMLEEF 480
           +   L DL +   ++ E+F
Sbjct: 112 LEKGLSDLMDLCDVVTEKF 130

[248][TOP]
>UniRef100_C4R752 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115
           RepID=C4R752_PICPG
          Length = 136

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/82 (31%), Positives = 45/82 (54%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F    EDHT+GN LR  +  +    + GY IPHP E  + +++QT G  +  +A+  
Sbjct: 47  AASFQILDEDHTLGNSLRYIIIKNPEVEYCGYSIPHPSEAKLNIRIQTYGGMTAVEALRK 106

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
            L+DL +    + ++F   ++A
Sbjct: 107 GLDDLVDICDHVEKKFSDVIAA 128

[249][TOP]
>UniRef100_C4JP01 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704
           RepID=C4JP01_UNCRE
          Length = 145

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 27/79 (34%), Positives = 41/79 (51%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT    +  + +  
Sbjct: 57  AASFQFEKEDHTLGNALRYVIMKNPGVEFCGYTMPHPSEERMNLRIQTYSPANVFEVLDK 116

Query: 433 ALEDLANEYHIMLEEFDQA 489
              DL +   ++LE F  A
Sbjct: 117 GFSDLMDLCDVVLETFTAA 135

[250][TOP]
>UniRef100_C0SH10 Predicted protein n=1 Tax=Paracoccidioides brasiliensis Pb03
           RepID=C0SH10_PARBP
          Length = 201

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 43/82 (52%)
 Frame = +1

Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
           A +F F  EDHT+GN LR  +  +    F GY +PHP E  M +++QT  T +    +  
Sbjct: 113 AVSFQFDREDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTTAIAVLEK 172

Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
             +DL     ++ E F +A +A
Sbjct: 173 GFDDLMELCDVVTETFTEAKNA 194