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[1][TOP] >UniRef100_A8HRP7 DNA-directed RNA polymerase II, 13.6 kDa polypeptide n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRP7_CHLRE Length = 115 Score = 236 bits (601), Expect = 1e-60 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG Sbjct: 1 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH Sbjct: 61 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 115 [2][TOP] >UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RYQ0_PHYPA Length = 137 Score = 116 bits (290), Expect = 1e-24 Identities = 56/106 (52%), Positives = 73/106 (68%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ D K+ +A TFT + EDHTIGN+LRMQLH D S +FAG Sbjct: 1 MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTLQREDHTIGNILRMQLHRDPSVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ +VVK+QTN S A A+ DL E + F+ Sbjct: 61 YKLPHPLQYRVVVKIQTNSQSSPMQAYNLAITDLTKELDHLKATFE 106 [3][TOP] >UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1 Tax=Ricinus communis RepID=B9RVP3_RICCO Length = 156 Score = 114 bits (286), Expect = 4e-24 Identities = 55/126 (43%), Positives = 79/126 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D++ +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525 YR+PHPL+ ++V++ T S A A+ DL E + F++ + + Sbjct: 61 YRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEECLRPKGTK-KGSW 119 Query: 526 VTAEWR 543 T+ WR Sbjct: 120 YTSSWR 125 [4][TOP] >UniRef100_Q6ZA50 Os07g0172500 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZA50_ORYSJ Length = 120 Score = 114 bits (284), Expect = 7e-24 Identities = 52/106 (49%), Positives = 73/106 (68%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +AG+FT EDHTIGN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V+V T + A A+ DL E + + F+ Sbjct: 61 YKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFE 106 [5][TOP] >UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays RepID=B4FJS1_MAIZE Length = 120 Score = 114 bits (284), Expect = 7e-24 Identities = 50/106 (47%), Positives = 72/106 (67%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+GN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V++ T S A A+ DL E + + F+ Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFE 106 [6][TOP] >UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFS8_PHYPA Length = 117 Score = 113 bits (283), Expect = 1e-23 Identities = 55/110 (50%), Positives = 72/110 (65%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ D K+ +A TFT EDHT+GN++RMQLH D S +FAG Sbjct: 1 MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTVEREDHTVGNVIRMQLHRDPSVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495 YR+PHPL+ +VVK+QT S A A+ DL E + F+ S Sbjct: 61 YRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVFEHETS 110 [7][TOP] >UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum bicolor RepID=C5YC44_SORBI Length = 117 Score = 113 bits (282), Expect = 1e-23 Identities = 50/106 (47%), Positives = 72/106 (67%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN++RMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V++ T S A A+ DL E + + F+ Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFE 106 [8][TOP] >UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum bicolor RepID=C5X6I3_SORBI Length = 120 Score = 112 bits (281), Expect = 2e-23 Identities = 50/106 (47%), Positives = 72/106 (67%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+GN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V++ T S A A+ DL E + + F+ Sbjct: 61 YKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAFE 106 [9][TOP] >UniRef100_A7P675 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7P675_VITVI Length = 116 Score = 112 bits (280), Expect = 2e-23 Identities = 50/106 (47%), Positives = 72/106 (67%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D++ +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ +++++ T S A A+ DL E + F+ Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 106 [10][TOP] >UniRef100_A4S056 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S056_OSTLU Length = 115 Score = 112 bits (279), Expect = 3e-23 Identities = 54/111 (48%), Positives = 76/111 (68%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP R +FVLPEGERK+ Y+ DTK+++AGTF + EDHTIGNLLRM+LH + VFAG Sbjct: 1 MNQPSRADRFVLPEGERKLSYERDTKVENAGTFVLQREDHTIGNLLRMELHKNPDVVFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498 Y+ PHP + +V+KV TN + A+ A+ +L E + ++F ++A Sbjct: 61 YKNPHPTDHRIVLKVHTNANTTPVQALRDAVTNLRAEVGDLSQQFADEINA 111 [11][TOP] >UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis thaliana RepID=RPB11_ARATH Length = 116 Score = 111 bits (277), Expect = 5e-23 Identities = 51/113 (45%), Positives = 75/113 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+RY +FV+PEG +KV Y DTK+ +A +FT EDHTIGN++RMQLH D++ +FAG Sbjct: 1 MNAPERYERFVVPEGTKKVSYDRDTKIINAASFTVEREDHTIGNIVRMQLHRDENVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504 Y++PHPL+ ++V++ T S A A+ DL E + +F+ V+ S Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFS 113 [12][TOP] >UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR Length = 116 Score = 110 bits (276), Expect = 6e-23 Identities = 51/106 (48%), Positives = 71/106 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V++ T S A A+ DL E + F+ Sbjct: 61 YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106 [13][TOP] >UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=B7FGH5_MEDTR Length = 116 Score = 110 bits (274), Expect = 1e-22 Identities = 49/106 (46%), Positives = 71/106 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ +++++ T S A ++ DL E + F+ Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 106 [14][TOP] >UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SW39_SOYBN Length = 116 Score = 108 bits (270), Expect = 3e-22 Identities = 49/106 (46%), Positives = 71/106 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT E+HTIGN+LRMQLH D + +FAG Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ ++V++ T S A ++ DL E + F+ Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFE 106 [15][TOP] >UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NN58_PICSI Length = 120 Score = 108 bits (270), Expect = 3e-22 Identities = 49/106 (46%), Positives = 71/106 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +FV+PEG +KV Y+ D K+ +A TF EDHTIGN++RMQLH D + +FAG Sbjct: 1 MNAPDRYEKFVVPEGTKKVSYERDMKIMNAATFVIEREDHTIGNIVRMQLHRDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPL+ +++++QT S A A++DL E + F+ Sbjct: 61 YKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFE 106 [16][TOP] >UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EAB7_9CHLO Length = 101 Score = 105 bits (261), Expect = 3e-21 Identities = 48/97 (49%), Positives = 68/97 (70%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP R +FVLP+G RK+ + DTK+ +AGT+ + EDHT+GN++RMQLH D + VFAG Sbjct: 1 MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTYVVQKEDHTLGNIVRMQLHRDPNVVFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANE 456 Y++PHP + +V+KV TN S AM ++ L+ E Sbjct: 61 YQVPHPSDNRIVIKVHTNKNSSPMQAMTESVNCLSEE 97 [17][TOP] >UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium discoideum RepID=RPB11_DICDI Length = 120 Score = 104 bits (260), Expect = 4e-21 Identities = 50/109 (45%), Positives = 72/109 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ FVLP+G +KV DTK+ +A FT EDHTIGNL+RMQL AD+ +FAG Sbjct: 1 MNAPDRFELFVLPDGAKKVTMVRDTKIPNASMFTILKEDHTIGNLIRMQLIADQDIIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 YR+PHPLE + +++QTN + + + ++E L+ E+ + F + V Sbjct: 61 YRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSFIEQV 109 [18][TOP] >UniRef100_A5BQX0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BQX0_VITVI Length = 129 Score = 103 bits (256), Expect = 1e-20 Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 13/119 (10%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERK-------------VKYKADTKLKDAGTFTFRSEDHTIGNLLR 306 MN PDRY +FV+PEG +K V Y+ DTK+ +A +FT EDHTIGN+LR Sbjct: 1 MNAPDRYERFVVPEGTKKYIVFSLLSQKLSLVSYERDTKIINAASFTVEREDHTIGNILR 60 Query: 307 MQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 MQLH D++ +FAGY++PHPL+ +++++ T S A A+ DL E + F+ Sbjct: 61 MQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 119 [19][TOP] >UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J (DNA-directed RNA polymerase II 13.3 kDa polypeptide) (RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD Length = 117 Score = 102 bits (255), Expect = 2e-20 Identities = 47/109 (43%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT + +A MHA+ DL E + E F +A+ Sbjct: 61 YKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEERFKEAI 109 [20][TOP] >UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes aegypti RepID=Q16IF1_AEDAE Length = 117 Score = 102 bits (253), Expect = 3e-20 Identities = 47/108 (43%), Positives = 71/108 (65%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 Y++PHPLE V+++QT S ++A M+A+ DL +E + E F +A Sbjct: 61 YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFKEA 108 [21][TOP] >UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS Length = 117 Score = 102 bits (253), Expect = 3e-20 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT S ++A M+A+ DL E + E F A+ Sbjct: 61 YKVPHPLEHKFVIRIQTTAEYSPQEAFMNAITDLLAELSLFEERFKDAI 109 [22][TOP] >UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila RepID=RPB11_DROME Length = 117 Score = 102 bits (253), Expect = 3e-20 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT S ++A M+A+ DL E + E F A+ Sbjct: 61 YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAI 109 [23][TOP] >UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Tribolium castaneum RepID=UPI0000D5702A Length = 117 Score = 101 bits (252), Expect = 4e-20 Identities = 45/109 (41%), Positives = 73/109 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYDGEKKIIREQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT S ++A+M+++ DL +E + E F +A+ Sbjct: 61 YKVPHPLEHKFVLRIQTTSDYSPQEALMNSITDLISELSLFEERFKEAI 109 [24][TOP] >UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex quinquefasciatus RepID=B0WDB4_CULQU Length = 117 Score = 101 bits (252), Expect = 4e-20 Identities = 47/108 (43%), Positives = 71/108 (65%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 Y++PHPLE V+++QT S ++A M+A+ DL +E + E F +A Sbjct: 61 YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFREA 108 [25][TOP] >UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma floridae RepID=UPI0001868C2E Length = 116 Score = 100 bits (250), Expect = 6e-20 Identities = 49/109 (44%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GNLLR QL D +FAG Sbjct: 1 MNAPPTFESFLLFEGEKKITITKDTKVPNAALFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT S ++A +A+ DL +E ++ E F AV Sbjct: 61 YKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 109 [26][TOP] >UniRef100_C8V407 DNA-directed RNA polymerase II subunit RPB11a, putative (AFU_orthologue; AFUA_7G03860) n=2 Tax=Emericella nidulans RepID=C8V407_EMENI Length = 129 Score = 100 bits (250), Expect = 6e-20 Identities = 47/114 (41%), Positives = 69/114 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA Sbjct: 1 MNAPDRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL P +++VQT+G S + A++ A +L + I+ EF + M Sbjct: 61 YKVPHPLVPKFILRVQTDGDISPKQAVITACNELVRDLGILSREFTKEYELRKM 114 [27][TOP] >UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CAF7 Length = 117 Score = 100 bits (249), Expect = 8e-20 Identities = 45/109 (41%), Positives = 72/109 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLFDGEKKIVKELDQKVPNAAIFTINKEDHTLGNMIRDQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT + +DA+M+A+ DL +E + E F +A+ Sbjct: 61 YKVPHPLEHKFVLRIQTTSDYTPQDALMNAITDLLSELSLFEERFKEAI 109 [28][TOP] >UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Ciona intestinalis RepID=UPI000180BEE7 Length = 117 Score = 100 bits (249), Expect = 8e-20 Identities = 47/109 (43%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ DTK+ +A FT EDHT+GN+LR QL D +FAG Sbjct: 1 MNAPPAFETFLLFDGEKKISITKDTKVPNAAHFTVNKEDHTLGNILRTQLLKDPKVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +++VQT G S ++A +A+ DL +E ++ E F V Sbjct: 61 YKVPHPLEHKFILRVQTTGDYSPQEAFTNAITDLISEISLLEERFKATV 109 [29][TOP] >UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG Length = 117 Score = 100 bits (249), Expect = 8e-20 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLMKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [30][TOP] >UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Nasonia vitripennis RepID=UPI00015B4993 Length = 117 Score = 100 bits (248), Expect = 1e-19 Identities = 46/109 (42%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT + +A M+A+ DL E + E F +A+ Sbjct: 61 YKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVTDLIAELSLFEERFKEAI 109 [31][TOP] >UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes RepID=UPI0000019E7A Length = 117 Score = 100 bits (248), Expect = 1e-19 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [32][TOP] >UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri RepID=Q69G41_BRABE Length = 135 Score = 100 bits (248), Expect = 1e-19 Identities = 48/105 (45%), Positives = 67/105 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GNLLR QL D +FAG Sbjct: 1 MNAPPTFESFLLFEGEKKITITKDTKVPNAAIFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE V++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEVSLLEERF 105 [33][TOP] >UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Triatoma infestans RepID=A6YPS3_TRIIF Length = 117 Score = 100 bits (248), Expect = 1e-19 Identities = 44/109 (40%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE KV + DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPTFDSFLLYDGEHKVIREMDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPKVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPL+P V+++QT ++ + + +A+ DL +E + E F +A+ Sbjct: 61 YKVPHPLDPKFVIRIQTTNDETPQSVLKNAITDLISELSLFEERFKEAI 109 [34][TOP] >UniRef100_A2R179 Contig An13c0010, complete genome n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2R179_ASPNC Length = 129 Score = 100 bits (248), Expect = 1e-19 Identities = 50/128 (39%), Positives = 74/128 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA Sbjct: 1 MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525 Y++PHPL P ++VQT+G + +DA++ A +L + I+ EF + M Sbjct: 61 YKVPHPLVPNFQLRVQTDGDITPKDAVIAACHELVRDLGILSREFTKEYELRKM----VG 116 Query: 526 VTAEWRGG 549 TA+ + G Sbjct: 117 ATAQQQNG 124 [35][TOP] >UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis RepID=B7PS85_IXOSC Length = 117 Score = 99.8 bits (247), Expect = 1e-19 Identities = 45/109 (41%), Positives = 71/109 (65%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITIEKDTKVPNAAIFTVNKEDHTLGNMIRAQLLKDPCVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +++VQT + ++A +A+ DL +E ++ E F ++V Sbjct: 61 YKVPHPLEHKFILRVQTTPDSTPQEAFTNAITDLISELSLLEERFKESV 109 [36][TOP] >UniRef100_A1DC50 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DC50_NEOFI Length = 167 Score = 99.8 bits (247), Expect = 1e-19 Identities = 47/113 (41%), Positives = 70/113 (61%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 +QP + FVL GE KV+ +ADT++ + FTF EDHT+GNLLR +L + +FAGY Sbjct: 40 DQPRSFESFVLSPGEEKVEVEADTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGY 99 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 ++PHPL P ++VQT+G + +DA++ A DL + I+ EF + M Sbjct: 100 KVPHPLVPKFELRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 152 [37][TOP] >UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE Length = 117 Score = 99.4 bits (246), Expect = 2e-19 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [38][TOP] >UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax RepID=C1BJJ1_OSMMO Length = 117 Score = 99.4 bits (246), Expect = 2e-19 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [39][TOP] >UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0EE3 Length = 1108 Score = 99.0 bits (245), Expect = 2e-19 Identities = 49/125 (39%), Positives = 75/125 (60%) Frame = +1 Query: 118 CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297 CGF G + MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN Sbjct: 982 CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 1035 Query: 298 LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477 +++ QL D +FAGY++PHPLE ++++VQT S ++A +A+ DL +E ++ E Sbjct: 1036 IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 1095 Query: 478 FDQAV 492 F A+ Sbjct: 1096 FRVAI 1100 [40][TOP] >UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA Length = 117 Score = 99.0 bits (245), Expect = 2e-19 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHTIGN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [41][TOP] >UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei RepID=B5XEX2_SALSA Length = 117 Score = 99.0 bits (245), Expect = 2e-19 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [42][TOP] >UniRef100_B4I598 GM17133 n=1 Tax=Drosophila sechellia RepID=B4I598_DROSE Length = 105 Score = 99.0 bits (245), Expect = 2e-19 Identities = 45/103 (43%), Positives = 68/103 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDHNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLE 474 Y++PHPLE V+++QT S ++A M+A+ DL E+ + E Sbjct: 61 YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAEFSLFEE 103 [43][TOP] >UniRef100_Q4WG57 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Aspergillus fumigatus RepID=Q4WG57_ASPFU Length = 167 Score = 99.0 bits (245), Expect = 2e-19 Identities = 55/151 (36%), Positives = 82/151 (54%) Frame = +1 Query: 55 PTLIDNHCAKIQVARCFHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKA 234 P ++ N A AR H T G + S+ +QP + FVL GE KV+ + Sbjct: 6 PFMLPNEMA---YARWIHATG-GSRNHNAFHSSINLDNDQPRSFESFVLSPGEEKVEIET 61 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414 DT++ + FTF EDHT+GNLLR +L + +FAGY++PHPL P ++VQT+G + Sbjct: 62 DTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGYKVPHPLVPKFELRVQTDGEITP 121 Query: 415 EDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 +DA++ A DL + I+ EF + M Sbjct: 122 KDALLAACHDLVKDLGILSREFTKEYELRKM 152 [44][TOP] >UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001923CF4 Length = 117 Score = 98.6 bits (244), Expect = 3e-19 Identities = 47/109 (43%), Positives = 68/109 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+ + F+L +GE+K+ DTK+ +A FT EDHT+GNL+R QL D +FAG Sbjct: 1 MNAPESFEPFLLLDGEKKINIVKDTKVPNAAHFTVMKEDHTLGNLIRSQLLKDPQVIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 YR+PHPLE V++QT S ++A A+ DL +E ++ E F A+ Sbjct: 61 YRVPHPLEHKFNVRIQTTPDYSPQEAFTSAITDLLSEISLLEERFKSAL 109 [45][TOP] >UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J (DNA-directed RNA polymerase II 13.3 kDa polypeptide) (RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED Length = 191 Score = 98.6 bits (244), Expect = 3e-19 Identities = 45/110 (40%), Positives = 71/110 (64%) Frame = +1 Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342 +MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FA Sbjct: 74 SMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 133 Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 134 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 183 [46][TOP] >UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR Length = 117 Score = 98.6 bits (244), Expect = 3e-19 Identities = 46/109 (42%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHTIGN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [47][TOP] >UniRef100_A7SGE2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SGE2_NEMVE Length = 117 Score = 98.6 bits (244), Expect = 3e-19 Identities = 47/109 (43%), Positives = 68/109 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+ + F+L +G++K+ DTK+ +A F EDHT+GNLLR QL D +FAG Sbjct: 1 MNAPEPFEPFLLLDGDKKITITKDTKVPNAAHFVVNKEDHTLGNLLREQLLKDPQVIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++ HPLE V++VQT S ++A HA+ DL +E ++ E F AV Sbjct: 61 YKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERFKAAV 109 [48][TOP] >UniRef100_Q1DQC2 DNA-directed RNA polymerase II n=1 Tax=Coccidioides immitis RepID=Q1DQC2_COCIM Length = 128 Score = 98.6 bits (244), Expect = 3e-19 Identities = 46/114 (40%), Positives = 69/114 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ FVL GE+KV+ + DT++ FTF EDHT+GNL+R QL + FAG Sbjct: 1 MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRAQLLKSQHVQFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL +++VQT+G + +DA++ A +L + + EF + M Sbjct: 61 YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114 [49][TOP] >UniRef100_C5PBJ9 RNA polymerase Rpb3/Rpb11 dimerization domain containing protein n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PBJ9_COCP7 Length = 128 Score = 98.6 bits (244), Expect = 3e-19 Identities = 46/114 (40%), Positives = 69/114 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ FVL GE+KV+ + DT++ FTF EDHT+GNL+R QL + FAG Sbjct: 1 MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL +++VQT+G + +DA++ A +L + + EF + M Sbjct: 61 YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114 [50][TOP] >UniRef100_B8NFM6 DNA-directed RNA polymerase II subunit RPB11a, putative n=2 Tax=Aspergillus RepID=B8NFM6_ASPFN Length = 129 Score = 98.6 bits (244), Expect = 3e-19 Identities = 46/114 (40%), Positives = 69/114 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA Sbjct: 1 MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL P ++VQT+G + ++A++ A +L + I+ EF + M Sbjct: 61 YKVPHPLVPKFELRVQTDGEITPKEAVIAACHELVRDLGILSREFTKEYELRKM 114 [51][TOP] >UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus RepID=RPB11_MOUSE Length = 117 Score = 98.2 bits (243), Expect = 4e-19 Identities = 45/109 (41%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRGAI 109 [52][TOP] >UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota RepID=RPB11_HUMAN Length = 117 Score = 98.2 bits (243), Expect = 4e-19 Identities = 45/109 (41%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [53][TOP] >UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles gambiae RepID=RPB11_ANOGA Length = 117 Score = 98.2 bits (243), Expect = 4e-19 Identities = 46/109 (42%), Positives = 70/109 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V+++QT S +A M+A+ DL +E + E F +A+ Sbjct: 61 YKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERFREAM 109 [54][TOP] >UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris RepID=UPI0000EB32C9 Length = 129 Score = 97.8 bits (242), Expect = 5e-19 Identities = 48/121 (39%), Positives = 73/121 (60%) Frame = +1 Query: 118 CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297 CGF G + MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN Sbjct: 4 CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 57 Query: 298 LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477 +++ QL D +FAGY++PHPLE ++++VQT S ++A +A+ DL +E ++ E Sbjct: 58 IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 117 Query: 478 F 480 F Sbjct: 118 F 118 [55][TOP] >UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax RepID=C1BLH2_OSMMO Length = 117 Score = 97.8 bits (242), Expect = 5e-19 Identities = 46/105 (43%), Positives = 68/105 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLSKEDHTLGNIIRSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [56][TOP] >UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS Length = 124 Score = 97.4 bits (241), Expect = 7e-19 Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+R F+L + E K++Y+ DTK+ +AGTFTF EDHT+ NLLRMQL D + FAG Sbjct: 1 MNAPERSSAFLLDDDEEKIEYQPDTKVSNAGTFTFNKEDHTVANLLRMQLLRDPAVKFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y PHPL + +K+QT ++ + + + A+EDL+NE +L + A+ Sbjct: 61 YMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHLLTQVTDAI 110 [57][TOP] >UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis domestica RepID=UPI00005EC058 Length = 128 Score = 97.1 bits (240), Expect = 9e-19 Identities = 44/105 (41%), Positives = 68/105 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [58][TOP] >UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus musculus RepID=UPI00001F2CA1 Length = 111 Score = 97.1 bits (240), Expect = 9e-19 Identities = 44/105 (41%), Positives = 68/105 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [59][TOP] >UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S6B1_TRIAD Length = 116 Score = 97.1 bits (240), Expect = 9e-19 Identities = 47/109 (43%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L E+K+ DTK+ +A FT EDHT+GN++R QL D +FAG Sbjct: 1 MNAPAPFEHFLLLPDEKKITITKDTKVPNACHFTIAKEDHTLGNIIRAQLLKDPQVIFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +V++VQT S E+A +AL DL +E +++ + F AV Sbjct: 61 YKVPHPLEYDVVIRVQTTSNYSPEEAFSNALTDLISELNVLDDRFKAAV 109 [60][TOP] >UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN Length = 127 Score = 97.1 bits (240), Expect = 9e-19 Identities = 44/105 (41%), Positives = 68/105 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [61][TOP] >UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens RepID=A6NK79_HUMAN Length = 116 Score = 97.1 bits (240), Expect = 9e-19 Identities = 44/105 (41%), Positives = 68/105 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [62][TOP] >UniRef100_A1CD73 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Aspergillus clavatus RepID=A1CD73_ASPCL Length = 165 Score = 97.1 bits (240), Expect = 9e-19 Identities = 46/113 (40%), Positives = 67/113 (59%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 +QP + FVL GE KV+ + DT++ FTF EDHT+GNLLR +L +FAGY Sbjct: 38 DQPHSFESFVLSPGEEKVEVQTDTRIPSTAIFTFNKEDHTLGNLLRSRLLQSPHVLFAGY 97 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 +IPHPL P +++QT+G + +DA++ A DL + I+ EF + M Sbjct: 98 KIPHPLVPKFELRIQTDGEVTPKDALLAACHDLVKDLGILSREFTKEFELRKM 150 [63][TOP] >UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3TYI2_MOUSE Length = 117 Score = 96.7 bits (239), Expect = 1e-18 Identities = 44/109 (40%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +F G Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFVG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [64][TOP] >UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB Length = 117 Score = 96.3 bits (238), Expect = 2e-18 Identities = 45/106 (42%), Positives = 68/106 (64%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN + F+L +GE+K+ + DTK+ +A FT EDHT+GN+LR QL D +FAG Sbjct: 1 MNAAPTFESFILFDGEKKITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++PHPLE V++VQT S ++A +A+ DL +E ++ E F+ Sbjct: 61 YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERFN 106 [65][TOP] >UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus mykiss RepID=C1BF62_ONCMY Length = 117 Score = 95.5 bits (236), Expect = 3e-18 Identities = 45/109 (41%), Positives = 68/109 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIKQQLLKDPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE V++VQT S ++A + + DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERFRVAI 109 [66][TOP] >UniRef100_C1MHV3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MHV3_9CHLO Length = 152 Score = 95.5 bits (236), Expect = 3e-18 Identities = 42/82 (51%), Positives = 59/82 (71%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP R +FVLP+G RK+ + DTK+ +AGTF + EDHT+GN +RMQLH D VF+G Sbjct: 1 MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTFVVQKEDHTLGNAVRMQLHRDPEVVFSG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKS 411 Y++PHP + +V+KV+ +S Sbjct: 61 YQVPHPSDNRIVIKVRAASAQS 82 [67][TOP] >UniRef100_B7G3C7 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3C7_PHATR Length = 125 Score = 95.5 bits (236), Expect = 3e-18 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = +1 Query: 166 MNQPDRYVQFVLPE--GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339 MN P+R F+L E GERK+ Y DTK+ +AGTF EDHT+ NLLRMQL D F Sbjct: 1 MNAPERASSFLLDEDSGERKIVYTTDTKVTNAGTFRLNKEDHTVLNLLRMQLLRDPGVRF 60 Query: 340 AGYRIPHPLEPVMVVKVQTNGT-KSCEDAMMHALEDLANEYHIMLEEFDQAV 492 AGY PHPL M +KVQTN + S + + +A+EDL +E +L+E A+ Sbjct: 61 AGYIHPHPLINYMELKVQTNSSHTSPTEVLSNAIEDLGSETDHLLKEVQNAM 112 [68][TOP] >UniRef100_B6HNK8 Pc21g05130 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HNK8_PENCW Length = 128 Score = 95.5 bits (236), Expect = 3e-18 Identities = 45/105 (42%), Positives = 64/105 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDRY +L GE K+ + DT+L A FTF EDHT+GN+LR +L +FA Sbjct: 1 MNAPDRYEAILLAPGENKIDVEVDTRLPSAAIFTFHKEDHTLGNMLRQRLLKTAHVIFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 YR+PHPL P ++VQT+G + A+++A + L + I+ EF Sbjct: 61 YRVPHPLTPEFQLRVQTDGEITPRQAVINASQALIKDLGILSREF 105 [69][TOP] >UniRef100_C5G7X6 DNA-directed RNA polymerase II polypeptide n=2 Tax=Ajellomyces dermatitidis RepID=C5G7X6_AJEDR Length = 128 Score = 94.7 bits (234), Expect = 5e-18 Identities = 42/114 (36%), Positives = 70/114 (61%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L +F+G Sbjct: 1 MNAPERFESFVLLPGEKKVEVEVDTRIPSTAIFTFHKEDHTLGNMIRSRLINSSHVLFSG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL P +++VQT+G + ++A++ A +L + + EF + M Sbjct: 61 YKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLGSLSREFTKEYELRKM 114 [70][TOP] >UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE Length = 119 Score = 94.4 bits (233), Expect = 6e-18 Identities = 43/94 (45%), Positives = 62/94 (65%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PD + F L +GE K+ Y+ D+K+ +AGTF EDHT+GNLL QL D +FAG Sbjct: 1 MNAPDPFESFRLEDGEAKITYEPDSKVPNAGTFRMNREDHTVGNLLASQLAKDPRVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 Y++PHPLE ++++V T S ++A+ AL D+ Sbjct: 61 YKVPHPLEHYILLRVHTTAQYSPKEALKQALHDV 94 [71][TOP] >UniRef100_C1FZC5 DNA-directed RNA polymerase II n=2 Tax=Paracoccidioides brasiliensis RepID=C1FZC5_PARBD Length = 128 Score = 94.4 bits (233), Expect = 6e-18 Identities = 42/114 (36%), Positives = 70/114 (61%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L +F+G Sbjct: 1 MNAPERFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKEDHTLGNMIRSRLLNSSHVLFSG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPL P +++VQT+G + ++A++ A +L + + EF + M Sbjct: 61 YKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLGALSREFTKEYELRKM 114 [72][TOP] >UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI Length = 117 Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/109 (39%), Positives = 69/109 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYDGEKKIVKEVDTKVTNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y+ PHPLE +++QT + +DA+ +++ DL E + E F +A+ Sbjct: 61 YKQPHPLEHKFELRIQTTSDYTPQDALTNSITDLLAELSLFEERFKEAL 109 [73][TOP] >UniRef100_UPI0000E21436 PREDICTED: similar to MGC13098 protein n=1 Tax=Pan troglodytes RepID=UPI0000E21436 Length = 398 Score = 93.2 bits (230), Expect = 1e-17 Identities = 42/106 (39%), Positives = 68/106 (64%) Frame = +1 Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342 +MN P + F+L EGE+K+ D K+ +A FT EDHT+GN+++ QL D +FA Sbjct: 239 SMNAPPAFESFLLFEGEKKISINKDFKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 298 Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 GY++PHPLE ++++ QT S ++A+ +A+ DL +E ++ E F Sbjct: 299 GYKVPHPLERKIIIEXQTTPDYSPQEALPNAIADLISELSLLEERF 344 [74][TOP] >UniRef100_B6Q8P4 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6Q8P4_PENMQ Length = 128 Score = 93.2 bits (230), Expect = 1e-17 Identities = 45/114 (39%), Positives = 67/114 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR F+L EGE+K++ KADT+ FT EDH++GNLLR +L ++ FA Sbjct: 1 MNAPDRTESFILGEGEKKIEEKADTRTPSTSIFTINKEDHSVGNLLRGRLLQNRHVTFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y+IPHPL + ++VQT+G + +DA++ A D + + EF + M Sbjct: 61 YKIPHPLVHKLELRVQTDGEITPKDALLAACHDTVRDLGTLSREFTKEFELRKM 114 [75][TOP] >UniRef100_UPI0000E2C133 conserved hypothetical protein n=1 Tax=Aspergillus terreus NIH2624 RepID=UPI0000E2C133 Length = 1608 Score = 92.8 bits (229), Expect = 2e-17 Identities = 43/104 (41%), Positives = 65/104 (62%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N RY FVL GE KV+ + DT++ + FTF EDHT+GNLL +L +FA Y Sbjct: 39 NDLPRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLLSSRLLQSSHVLFAAY 98 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 ++PHPL+P +++VQT+G + +DA++ A +L + I+ EF Sbjct: 99 KVPHPLDPKFLLRVQTDGEITPKDAVIAACHELVRDLGILSREF 142 [76][TOP] >UniRef100_C1H7F3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1H7F3_PARBA Length = 169 Score = 92.4 bits (228), Expect = 2e-17 Identities = 47/149 (31%), Positives = 80/149 (53%) Frame = +1 Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282 F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED Sbjct: 21 FDSSAASYRQNPCRTKV-RPHLDNVSRFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKED 79 Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462 HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L + Sbjct: 80 HTLGNMIRSRLLNSSHVLFSGYKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLG 139 Query: 463 IMLEEFDQAVSAASMH*DAAAVTAEWRGG 549 + EF + M WRGG Sbjct: 140 ALSREFTKEYELRKMEPGQG-----WRGG 163 [77][TOP] >UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens RepID=UPI0001AE70B6 Length = 180 Score = 92.0 bits (227), Expect = 3e-17 Identities = 44/106 (41%), Positives = 68/106 (64%) Frame = +1 Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342 +MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FA Sbjct: 22 SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80 Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 81 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 126 [78][TOP] >UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens RepID=UPI0000163C17 Length = 158 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/105 (41%), Positives = 67/105 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [79][TOP] >UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens RepID=Q8TDE6_HUMAN Length = 158 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/105 (41%), Positives = 67/105 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [80][TOP] >UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens RepID=Q59FR2_HUMAN Length = 180 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/106 (41%), Positives = 67/106 (63%) Frame = +1 Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342 +MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FA Sbjct: 22 SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80 Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 GY++PHPLE ++++VQT S ++A +A+ DL E ++ E F Sbjct: 81 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLIRELSLLEERF 126 [81][TOP] >UniRef100_C4K042 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Uncinocarpus reesii 1704 RepID=C4K042_UNCRE Length = 125 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/109 (40%), Positives = 66/109 (60%) Frame = +1 Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360 R+ FVL GE+KV+ + DT+L FTF EDHT+GNL+R QL + FAGY++PH Sbjct: 3 RFESFVLGPGEKKVEMEPDTRLPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAGYKVPH 62 Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 PL +++VQT+GT + +DA++ A +L + + EF + M Sbjct: 63 PLVHKFMLRVQTDGTITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 111 [82][TOP] >UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo sapiens RepID=RPB1C_HUMAN Length = 115 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/105 (41%), Positives = 67/105 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [83][TOP] >UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo sapiens RepID=RPB1B_HUMAN Length = 115 Score = 91.7 bits (226), Expect = 4e-17 Identities = 44/105 (41%), Positives = 67/105 (63%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [84][TOP] >UniRef100_UPI0001792BF8 PREDICTED: similar to GA19897-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792BF8 Length = 119 Score = 91.3 bits (225), Expect = 5e-17 Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG Sbjct: 1 MNAPPTFESFLLYDGEKKIVQELDTKVVNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE +++QT+ + + +DA+ ++L DL E + E F A+ Sbjct: 61 YKLPHPLEHKFELRIQTSCPEYTPQDALTNSLTDLLAELSLFEERFKDAL 110 [85][TOP] >UniRef100_C4Q8A9 DNA-directed rna polymerase II 13.3 kD polypeptide, putative n=1 Tax=Schistosoma mansoni RepID=C4Q8A9_SCHMA Length = 110 Score = 91.3 bits (225), Expect = 5e-17 Identities = 43/108 (39%), Positives = 67/108 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L +GE+K+ ++ DT++ +A FT EDHT+GN++ QL D +FAG Sbjct: 1 MNAPASFEPFLLADGEKKISFEKDTQVPNAAIFTLNREDHTVGNMITCQLLKDPRVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 Y+ PHPLE +V++V T + D + AL+DL +E + E+F A Sbjct: 61 YKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQFRMA 108 [86][TOP] >UniRef100_UPI000155D3C2 PREDICTED: similar to RNA polymerase II n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155D3C2 Length = 117 Score = 90.9 bits (224), Expect = 7e-17 Identities = 42/109 (38%), Positives = 67/109 (61%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D + Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLLQE 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+ Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109 [87][TOP] >UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo sapiens RepID=UPI000020F7F2 Length = 115 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/105 (41%), Positives = 66/105 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [88][TOP] >UniRef100_Q8IH32 GM15177p n=1 Tax=Drosophila melanogaster RepID=Q8IH32_DROME Length = 136 Score = 90.9 bits (224), Expect = 7e-17 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 19/128 (14%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309 MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRKYVGQQARLITHE 60 Query: 310 -------QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIM 468 QL D + +FAGY++PHPLE V+++QT S ++A M+A+ DL E + Sbjct: 61 ICILACSQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLF 120 Query: 469 LEEFDQAV 492 E F A+ Sbjct: 121 EERFKDAI 128 [89][TOP] >UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens RepID=A6NFM0_HUMAN Length = 158 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/105 (41%), Positives = 66/105 (62%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE K+ DTK+ A FT EDHT+GN+++ QL D +FAG Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [90][TOP] >UniRef100_UPI000187D7E2 hypothetical protein MPER_11952 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187D7E2 Length = 151 Score = 90.5 bits (223), Expect = 9e-17 Identities = 41/90 (45%), Positives = 60/90 (66%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP+RY FVL +GER V+ DTK+ +AGT +DHT+ +LR QL + +FAG Sbjct: 1 MNQPNRYELFVLDDGERPVEVTEDTKIPNAGTIKIVKQDHTLAGMLRAQLLSMPQVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435 Y++PHPL P ++K+QT+G+ + E + A Sbjct: 61 YKVPHPLHPYFIIKIQTDGSITPEAILEQA 90 [91][TOP] >UniRef100_C0NWN5 Polymerase II polypeptide J n=2 Tax=Ajellomyces capsulatus RepID=C0NWN5_AJECG Length = 168 Score = 90.5 bits (223), Expect = 9e-17 Identities = 43/135 (31%), Positives = 76/135 (56%) Frame = +1 Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282 F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED Sbjct: 21 FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79 Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462 HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L + Sbjct: 80 HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139 Query: 463 IMLEEFDQAVSAASM 507 + EF + M Sbjct: 140 SLSREFTKEYELRKM 154 [92][TOP] >UniRef100_A6R7X6 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R7X6_AJECN Length = 168 Score = 90.5 bits (223), Expect = 9e-17 Identities = 43/135 (31%), Positives = 76/135 (56%) Frame = +1 Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282 F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED Sbjct: 21 FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79 Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462 HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L + Sbjct: 80 HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139 Query: 463 IMLEEFDQAVSAASM 507 + EF + M Sbjct: 140 SLSREFTKEYELRKM 154 [93][TOP] >UniRef100_A8PVS2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVS2_MALGO Length = 159 Score = 90.1 bits (222), Expect = 1e-16 Identities = 38/93 (40%), Positives = 62/93 (66%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N PDR+ F+L GE++++ + D ++ +A TF F EDHT+GN+LR + A +F GY Sbjct: 3 NAPDRFTLFLLQPGEQRIEVQEDMRIPNAATFIFNKEDHTLGNMLRHAVLAQPGVLFCGY 62 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 ++PHPLEP ++VK+QT+G+ + + + A L Sbjct: 63 KVPHPLEPRVLVKIQTDGSLTPAEVLQQACTKL 95 [94][TOP] >UniRef100_UPI000013CAF5 UPI000013CAF5 related cluster n=1 Tax=Homo sapiens RepID=UPI000013CAF5 Length = 117 Score = 89.7 bits (221), Expect = 1e-16 Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLH-ADKSTVFA 342 +N P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ Q D +FA Sbjct: 1 VNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFA 60 Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F Sbjct: 61 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 106 [95][TOP] >UniRef100_Q4PC39 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PC39_USTMA Length = 145 Score = 89.7 bits (221), Expect = 1e-16 Identities = 40/93 (43%), Positives = 63/93 (67%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N P+R+ F+L E++V+ DTK+ +A TF F EDHT+GN+LR + A+ + +F GY Sbjct: 3 NAPNRFDLFILGPDEKRVEIVEDTKIPNAATFWFNKEDHTLGNMLRHAVLANPAVLFCGY 62 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 ++PHPLEP + VK+QT+G+ + DA+ + L Sbjct: 63 KVPHPLEPKVFVKIQTDGSLTPTDALKQGSQKL 95 [96][TOP] >UniRef100_A8NBN7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NBN7_COPC7 Length = 144 Score = 89.7 bits (221), Expect = 1e-16 Identities = 45/110 (40%), Positives = 68/110 (61%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P RY FVL +GE+ V+ D+K+ +A T +DHT+GN+LR QL A +FAG Sbjct: 1 MNAPARYELFVLEDGEKPVEVIEDSKIPNAATIKVVKQDHTLGNMLRSQLLAMPEVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495 Y++PHPL P +VKVQT+G+ + + A+ A L + + ++F + S Sbjct: 61 YKVPHPLHPYFIVKVQTDGSITPQAAVEAACTKLIATINTVAQKFKREFS 110 [97][TOP] >UniRef100_B0DBT6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DBT6_LACBS Length = 150 Score = 89.0 bits (219), Expect = 3e-16 Identities = 42/110 (38%), Positives = 67/110 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P+RY +VL +GE+ V+ DTK+ +A T +DHT+GN+LR QL + +FAG Sbjct: 1 MNAPNRYELYVLEDGEKPVEITEDTKIPNAATIKIVKQDHTLGNMLRAQLLSMPQILFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495 Y++PHPL P ++K+QT+GT + + + A L + +F++ S Sbjct: 61 YKVPHPLHPYFLIKIQTDGTITPQAILHQACTKLIGTMSSLETKFNREFS 110 [98][TOP] >UniRef100_A7ELB7 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7ELB7_SCLS1 Length = 124 Score = 89.0 bits (219), Expect = 3e-16 Identities = 40/113 (35%), Positives = 67/113 (59%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N P+R+ F+L +GE+K +ADT+ ++ FTF EDHT+ N+LR L D +F+GY Sbjct: 3 NAPERFELFILGDGEKKCTEEADTRTPNSSIFTFNKEDHTLANMLRAHLLKDPHVIFSGY 62 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 +IPHPL +++QT+G + ++A++ +L +E + EF + M Sbjct: 63 KIPHPLFSKFELRIQTDGEITPKEALVACCRNLVSELEVFSREFTKEFELRKM 115 [99][TOP] >UniRef100_A3BH10 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3BH10_ORYSJ Length = 135 Score = 88.2 bits (217), Expect = 4e-16 Identities = 41/90 (45%), Positives = 59/90 (65%) Frame = +1 Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393 R V Y+ DTK+ +AG+FT EDHTIGN+LRMQLH D + +FAGY++PHPL+ ++V+V Sbjct: 32 RWVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILVRVH 91 Query: 394 TNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 T + A A+ DL E + + F+ Sbjct: 92 TANQSTPTQAYTQAINDLDKELENLKQAFE 121 [100][TOP] >UniRef100_A8PTP7 RNA polymerase II., putative n=1 Tax=Brugia malayi RepID=A8PTP7_BRUMA Length = 133 Score = 88.2 bits (217), Expect = 4e-16 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 16/125 (12%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309 MN P + F++ +GE+K+ + DTK+ +A FT EDHTIGNLL+ Sbjct: 1 MNAPAPFESFLVFDGEKKIAIEKDTKVPNAAIFTVNKEDHTIGNLLKQFAAKIFHKSYFG 60 Query: 310 ----QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477 QL D +FAGY+ PHPLE +++VQT + EDA+ A+ DL E + E Sbjct: 61 TFCSQLLKDPQVLFAGYKCPHPLEHKFILRVQTTSDTTPEDALTSAITDLMAELSLFEER 120 Query: 478 FDQAV 492 F +A+ Sbjct: 121 FREAI 125 [101][TOP] >UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR Length = 122 Score = 88.2 bits (217), Expect = 4e-16 Identities = 43/117 (36%), Positives = 69/117 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L + ++K+ + DTK+ +A FT EDHT+GN+L++QL D +FAG Sbjct: 1 MNAPAAFESFLLLD-DKKIYIEKDTKVPNAAIFTINKEDHTLGNMLKIQLLKDPEVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516 Y+ PHPLE ++++VQT + DA+ A+ DL E ++ D A+ + D Sbjct: 60 YKNPHPLEHKILLRVQTTNATTPADALTTAITDLVGELSLLEHRIDSAIKKCTQSTD 116 [102][TOP] >UniRef100_C5FYD6 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FYD6_NANOT Length = 161 Score = 87.4 bits (215), Expect = 7e-16 Identities = 41/109 (37%), Positives = 66/109 (60%) Frame = +1 Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360 R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L + +FAGY+IPH Sbjct: 39 RFESFVLGPGEKKVEIEVDTRVPSTAIFTFNKEDHTLGNMIRARLLQSQHVLFAGYKIPH 98 Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 PL ++++VQT+G + +DA++ A +L + EF + M Sbjct: 99 PLVHKVLLRVQTDGQITPKDAVLTACHELVKDLGTFSREFTKEYELRKM 147 [103][TOP] >UniRef100_Q6CUB7 KLLA0C06160p n=1 Tax=Kluyveromyces lactis RepID=Q6CUB7_KLULA Length = 121 Score = 87.0 bits (214), Expect = 1e-15 Identities = 42/106 (39%), Positives = 63/106 (59%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LPEGE K+K + DTK A TF EDHT+GNL+R +L D+ +FA Sbjct: 1 MNAPDRFELFLLPEGESKLKVEQDTKASSAIIVTFEKEDHTLGNLIRAELLEDEGVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL +++QT +DA+ +A + N+ + F+ Sbjct: 61 YKVEHPLFAKFKMRIQTVEGYDPKDALKNACNSIINKLAQLQSNFE 106 [104][TOP] >UniRef100_B8LZG9 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8LZG9_TALSN Length = 156 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/120 (36%), Positives = 69/120 (57%) Frame = +1 Query: 148 SA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327 SA A+N P + F+L EGE+K++ KADT+ FT EDH++GNLLR +L ++ Sbjct: 23 SAPPPAVNVPRKTESFILGEGEKKIEEKADTRTPSTSIFTLNKEDHSVGNLLRGRLLQNR 82 Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 FA Y+IPHPL + ++VQT+G + ++A++ A D + + EF + M Sbjct: 83 HVTFAAYKIPHPLVHKVELRVQTDGEITPKEALLAACHDTVRDLGTLSREFTKEFELRKM 142 [105][TOP] >UniRef100_B5X6K5 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Salmo salar RepID=B5X6K5_SALSA Length = 128 Score = 86.3 bits (212), Expect = 2e-15 Identities = 40/105 (38%), Positives = 61/105 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L EGE+K++ K + + + F EDHT+GNLL L A + AG Sbjct: 1 MNAPDRFELFLLSEGEKKIEEKVYSGMSNTSDFVLNKEDHTLGNLLAEHLKAHPNVYMAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++ HP P + +++QT+GTK+ D E L N+ + +EF Sbjct: 61 YKLGHPNVPQLFIRLQTDGTKTPRDVFTSVCEKLINQLESLHQEF 105 [106][TOP] >UniRef100_Q6BLX4 DEHA2F09944p n=1 Tax=Debaryomyces hansenii RepID=Q6BLX4_DEBHA Length = 122 Score = 86.3 bits (212), Expect = 2e-15 Identities = 41/105 (39%), Positives = 61/105 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K+K DTK+ +A EDHT+GNL+R QL D+ +FA Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDTKVPNAALIKIEREDHTLGNLIRAQLLKDERVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++ HPL V+++QT S +A+ +A L E ++ F Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALRNACSGLIGELDVIKTRF 105 [107][TOP] >UniRef100_B9W6P5 DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9W6P5_CANDC Length = 124 Score = 86.3 bits (212), Expect = 2e-15 Identities = 42/106 (39%), Positives = 63/106 (59%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D+ +FA Sbjct: 1 MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDERVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL V++VQT S +A+ +A L +E ++ +F+ Sbjct: 61 YKVEHPLFANFVLRVQTEDDYSPREALQNACSSLISELDVIKSKFN 106 [108][TOP] >UniRef100_Q75CF1 ACL005Cp n=1 Tax=Eremothecium gossypii RepID=Q75CF1_ASHGO Length = 122 Score = 85.5 bits (210), Expect = 3e-15 Identities = 40/106 (37%), Positives = 64/106 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LPEGE K+K + DTK +A TF EDHT+GN++R +L D+ +FA Sbjct: 1 MNAPDRFELFLLPEGESKLKIEPDTKAANAVIITFEKEDHTLGNIIRAELLEDERVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL +++QT ++A+ +A + N+ + F+ Sbjct: 61 YKVEHPLFARFRMRIQTAEGYDPKEALKNACNSIINKLATLKSNFE 106 [109][TOP] >UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE Length = 162 Score = 85.5 bits (210), Expect = 3e-15 Identities = 41/114 (35%), Positives = 67/114 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP+R ++L + E+ + D KL +A T R +DHT+GN+LR QL D + +FAG Sbjct: 1 MNQPNRIDSWLLQDDEKPLTITEDPKLPNASTIVIRRQDHTLGNMLRAQLMLDPTVLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 Y++PHPLE +++K+QT+ + +A+ A +L + + +F Q M Sbjct: 61 YKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQFQQQAKNIEM 114 [110][TOP] >UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Caenorhabditis elegans RepID=RPB11_CAEEL Length = 122 Score = 85.5 bits (210), Expect = 3e-15 Identities = 42/117 (35%), Positives = 68/117 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L + ++K + DTK+ +A FT EDHT+GN+L++QL D +FAG Sbjct: 1 MNAPAAFESFLLLD-DKKFYIEKDTKVPNAAIFTIMKEDHTLGNMLKIQLLKDPEVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516 Y+ PHPLE +++++QT + DA+ A+ DL E ++ D A+ + D Sbjct: 60 YKNPHPLEHKILLRIQTTNNTTPADALTTAITDLVGELSLLEHRIDAAIKKCTQSGD 116 [111][TOP] >UniRef100_Q6C7Q3 YALI0D26301p n=1 Tax=Yarrowia lipolytica RepID=Q6C7Q3_YARLI Length = 117 Score = 85.1 bits (209), Expect = 4e-15 Identities = 40/107 (37%), Positives = 63/107 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K++ DT++ + F EDHT+GNLLR QL D +FA Sbjct: 1 MNAPDRFELFLLPDGVPKLEVTPDTRIPNCANIKFEKEDHTLGNLLRSQLLHDSRVIFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 Y++ HPL V+++QT S ++A+ +A L + + E+F + Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPQEALTNACNALIRQLSDLQEKFQR 107 [112][TOP] >UniRef100_C4YFG3 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Candida albicans RepID=C4YFG3_CANAL Length = 124 Score = 84.7 bits (208), Expect = 5e-15 Identities = 41/106 (38%), Positives = 62/106 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D +FA Sbjct: 1 MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDDRVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL V+++QT S +A+ +A L +E ++ +F+ Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALQNACSGLISELDVIKSKFN 106 [113][TOP] >UniRef100_A5DVI5 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Lodderomyces elongisporus RepID=A5DVI5_LODEL Length = 121 Score = 84.7 bits (208), Expect = 5e-15 Identities = 41/107 (38%), Positives = 62/107 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D +FA Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDTKVPNAAIIKIEREDHTLANLLRAQLLKDPRVIFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 Y++ HPL V+++QT + ++A+ +A L NE + +F + Sbjct: 61 YKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKFSE 107 [114][TOP] >UniRef100_C6K0C3 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=9 Tax=Pyretophorus RepID=C6K0C3_ANOAR Length = 85 Score = 84.0 bits (206), Expect = 8e-15 Identities = 38/84 (45%), Positives = 57/84 (67%) Frame = +1 Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 EGE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAGY++PHPLE V+ Sbjct: 2 EGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVL 61 Query: 385 KVQTNGTKSCEDAMMHALEDLANE 456 ++QT S +A M+A+ DL +E Sbjct: 62 RIQTTSEYSPHEAFMNAITDLLSE 85 [115][TOP] >UniRef100_C8ZHW0 Rpb11p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZHW0_YEAST Length = 120 Score = 84.0 bits (206), Expect = 8e-15 Identities = 41/106 (38%), Positives = 61/106 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D+ +FA Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HP ++VQT +DA+ +A + N+ + F+ Sbjct: 61 YKVEHPFFARFKLRVQTTEGYDPKDALKNACNSIINKLGALKTNFE 106 [116][TOP] >UniRef100_A7TJW3 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TJW3_VANPO Length = 120 Score = 84.0 bits (206), Expect = 8e-15 Identities = 40/106 (37%), Positives = 63/106 (59%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PD++ F+L EGE K+ + DTK +A TF EDHT+GNL+R +L D +FA Sbjct: 1 MNAPDKFELFLLGEGESKLNIEPDTKAPNAVVITFEKEDHTLGNLIRSELLNDSKVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL +++QT +DA+ +A ++ N+ I+ F+ Sbjct: 61 YKVEHPLFARFKLRIQTVENYDPKDALKNACNNIINKLGILKTNFE 106 [117][TOP] >UniRef100_P38902 DNA-directed RNA polymerase II subunit RPB11 n=4 Tax=Saccharomyces cerevisiae RepID=RPB11_YEAST Length = 120 Score = 83.6 bits (205), Expect = 1e-14 Identities = 40/106 (37%), Positives = 61/106 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D+ +FA Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HP +++QT +DA+ +A + N+ + F+ Sbjct: 61 YKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFE 106 [118][TOP] >UniRef100_A3LX93 RNA polymerase II core subunit n=1 Tax=Pichia stipitis RepID=A3LX93_PICST Length = 122 Score = 83.2 bits (204), Expect = 1e-14 Identities = 40/105 (38%), Positives = 60/105 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+G K+K D+K+ +A EDHT+ NLLR QL D +FA Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDSKVPNAAIIKIEREDHTLANLLRAQLLKDPRVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 Y++ HPL V+++QT S +A+ +A L +E ++ F Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALKNACSGLISELDVIKNRF 105 [119][TOP] >UniRef100_C5DEP5 KLTH0C10934p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEP5_LACTC Length = 122 Score = 82.8 bits (203), Expect = 2e-14 Identities = 41/106 (38%), Positives = 62/106 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LPEGE K+K DTK +A TF EDHT+ NL+R +L DK +FA Sbjct: 1 MNAPDRFELFLLPEGEAKLKIDPDTKAPNAVIVTFEKEDHTLANLIRGELLEDKGVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL +++QT +DA+ +A + ++ + F+ Sbjct: 61 YKVEHPLFAQFKLRIQTVEGYDPKDALKNACNGIISKLGQLQSNFE 106 [120][TOP] >UniRef100_C5DTD1 ZYRO0C07502p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DTD1_ZYGRC Length = 122 Score = 82.4 bits (202), Expect = 2e-14 Identities = 40/106 (37%), Positives = 62/106 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L EGE K++ DTK +A TF EDHT+GNL+R +L D +FA Sbjct: 1 MNAPDRFELFLLGEGESKLRVDPDTKAPNAIVVTFEKEDHTLGNLIRAELLNDPKVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HPL +++QT +DA+ +A + N+ ++ F+ Sbjct: 61 YKVEHPLFARFKMRIQTMEGYDPKDALKNACNGIINKLGVLKTNFE 106 [121][TOP] >UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F Length = 99 Score = 82.0 bits (201), Expect = 3e-14 Identities = 38/88 (43%), Positives = 57/88 (64%) Frame = +1 Query: 220 VKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTN 399 + + DTK+ +A FT EDHT+GN+LR QL D +FAGY++PHPLE V++VQT Sbjct: 1 ITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTT 60 Query: 400 GTKSCEDAMMHALEDLANEYHIMLEEFD 483 S ++A +A+ DL +E ++ E F+ Sbjct: 61 PDYSPQEAFTNAITDLISEISLLEERFN 88 [122][TOP] >UniRef100_Q6FVE8 Strain CBS138 chromosome A complete sequence n=1 Tax=Candida glabrata RepID=Q6FVE8_CANGA Length = 120 Score = 82.0 bits (201), Expect = 3e-14 Identities = 40/106 (37%), Positives = 60/106 (56%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D +FA Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDNKVLFAA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483 Y++ HP +++QT +DA+ +A + N+ + F+ Sbjct: 61 YKVEHPFFARFKLRIQTVEGYDPKDALRNACSSIINKLGALKSNFE 106 [123][TOP] >UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4 (RasGAP-activating-like protein 2) (Calcium-promoted Ras inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348 Length = 763 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/92 (39%), Positives = 59/92 (64%) Frame = +1 Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396 ++ DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT Sbjct: 664 RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 723 Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 S ++A +A+ DL +E ++ E F A+ Sbjct: 724 TPDYSPQEAFTNAITDLISELSLLEERFRVAI 755 [124][TOP] >UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus RepID=UPI00003AB60B Length = 100 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/92 (39%), Positives = 59/92 (64%) Frame = +1 Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396 ++ DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT Sbjct: 1 RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 60 Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 S ++A +A+ DL +E ++ E F A+ Sbjct: 61 TPDYSPQEAFTNAITDLISELSLLEERFRVAI 92 [125][TOP] >UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J n=1 Tax=Taeniopygia guttata RepID=UPI000194D687 Length = 113 Score = 80.5 bits (197), Expect = 9e-14 Identities = 36/86 (41%), Positives = 57/86 (66%) Frame = +1 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414 DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S Sbjct: 20 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 79 Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492 ++A +A+ DL +E ++ E F A+ Sbjct: 80 QEAFTNAITDLISELSLLEERFRVAI 105 [126][TOP] >UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1 Tax=Pan troglodytes RepID=UPI0000E2167E Length = 262 Score = 80.5 bits (197), Expect = 9e-14 Identities = 36/86 (41%), Positives = 57/86 (66%) Frame = +1 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414 DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S Sbjct: 169 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 228 Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492 ++A +A+ DL +E ++ E F A+ Sbjct: 229 QEAFTNAITDLISELSLLEERFRVAI 254 [127][TOP] >UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E21685 Length = 576 Score = 79.7 bits (195), Expect = 2e-13 Identities = 35/82 (42%), Positives = 55/82 (67%) Frame = +1 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414 DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S Sbjct: 441 DTKVSNACLFTINKEDHTLGNIIKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 500 Query: 415 EDAMMHALEDLANEYHIMLEEF 480 ++A +A+ DL +E ++ E F Sbjct: 501 QEAFTNAITDLISELSLLEERF 522 [128][TOP] >UniRef100_A9BKX6 Rpb11 n=1 Tax=Cryptophyta RepID=A9BKX6_9CRYP Length = 106 Score = 79.7 bits (195), Expect = 2e-13 Identities = 39/97 (40%), Positives = 59/97 (60%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N P+ VLPE +K+ + D K K+ G F EDHT+G+L+ +L +KS +F+GY Sbjct: 3 NTPNALESLVLPETLQKITFYKDEKNKNCGYFKIEKEDHTLGHLIHSKLLKEKSVIFSGY 62 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEY 459 + PHPLE + +K+ T+G S +DA L+DL E+ Sbjct: 63 KRPHPLEHFIYLKIITDGVFSPKDAFDSVLKDLYIEF 99 [129][TOP] >UniRef100_Q9C256 Related to DNA-directed RNA polymerase 13.3K chain n=1 Tax=Neurospora crassa RepID=Q9C256_NEUCR Length = 133 Score = 79.3 bits (194), Expect = 2e-13 Identities = 38/110 (34%), Positives = 64/110 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L +GE+K++ K T + + F EDHT+GNLL L + AG Sbjct: 1 MNAPDRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495 Y+I HP P + +++QT+G+ + +A++ A + L Y + EF + ++ Sbjct: 61 YKIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 110 [130][TOP] >UniRef100_B6K818 DNA-directed RNA polymerase II complex subunit Rpb11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K818_SCHJY Length = 123 Score = 79.0 bits (193), Expect = 3e-13 Identities = 41/94 (43%), Positives = 57/94 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP+RY + + G KV Y+ DTK + T EDHT+ N+LR QL D+ VFAG Sbjct: 1 MNQPERY-ELIELMGLPKVTYELDTKSPNTANITIEKEDHTLANMLRTQLLYDERVVFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 YR+PHPL +++VQT S + A++ A + L Sbjct: 60 YRVPHPLNHNFILRVQTTEECSPKQAIIDASKSL 93 [131][TOP] >UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LKR8_9ALVE Length = 149 Score = 77.4 bits (189), Expect = 8e-13 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%) Frame = +1 Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327 N+PD LPEG ER++ Y+ + + + GTFT EDHT + LR +L ++ Sbjct: 12 NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71 Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498 FAGY++PHPLE ++++VQ + +AM AL+ L ++ + +EFD+++ A Sbjct: 72 QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128 [132][TOP] >UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KDT1_9ALVE Length = 149 Score = 77.4 bits (189), Expect = 8e-13 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%) Frame = +1 Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327 N+PD LPEG ER++ Y+ + + + GTFT EDHT + LR +L ++ Sbjct: 12 NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71 Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498 FAGY++PHPLE ++++VQ + +AM AL+ L ++ + +EFD+++ A Sbjct: 72 QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128 [133][TOP] >UniRef100_B6AF09 RNA polymerase II subunit RPB11, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AF09_9CRYT Length = 121 Score = 77.4 bits (189), Expect = 8e-13 Identities = 35/92 (38%), Positives = 59/92 (64%) Frame = +1 Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396 +VK++ ++++ G+F EDHT+GNLLR QL D S +FA Y++PHPLEP++ +++QT Sbjct: 23 RVKWEVESRVPCCGSFMIMLEDHTLGNLLRTQLLRDPSVIFAAYKVPHPLEPMVQIRIQT 82 Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 T + AM +A++ + E + F A+ Sbjct: 83 RETTTPFVAMQNAIQMILAETQTVANTFKDAM 114 [134][TOP] >UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FPR0_CRYPV Length = 115 Score = 75.5 bits (184), Expect = 3e-12 Identities = 31/92 (33%), Positives = 60/92 (65%) Frame = +1 Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396 +V++K ++++ G+F EDHT+GNL+ QL D + +FAGY++PHPLEP++ +++QT Sbjct: 17 RVQWKVESRVPCCGSFMIMLEDHTLGNLITTQLLRDPNVIFAGYKVPHPLEPLVQIRIQT 76 Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 + A+ +A++ + E ++L F ++ Sbjct: 77 RENTTPFVAIQNAIKSIQMESQVILNSFKDSM 108 [135][TOP] >UniRef100_C6K0F4 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=1 Tax=Anopheles gambiae RepID=C6K0F4_ANOGA Length = 79 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/74 (45%), Positives = 49/74 (66%) Frame = +1 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414 D K+ +A FT EDHT+GN++R QL D + +FAGY++PHPLE V+++QT S Sbjct: 6 DMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSP 65 Query: 415 EDAMMHALEDLANE 456 +A M A+ DL +E Sbjct: 66 HEAFMXAITDLLSE 79 [136][TOP] >UniRef100_C7YU34 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YU34_NECH7 Length = 136 Score = 75.1 bits (183), Expect = 4e-12 Identities = 35/103 (33%), Positives = 57/103 (55%) Frame = +1 Query: 172 QPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYR 351 Q + F+L +GE+K++ K + + + F + EDHT+GNLL L + AGY+ Sbjct: 12 QDSPFELFILDDGEKKIEEKVFSGMSNTSDFVLKKEDHTLGNLLSEHLKMHPNVYMAGYK 71 Query: 352 IPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 I HP P + ++VQT+GT + D E L N+ ++ +EF Sbjct: 72 IAHPNVPELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 114 [137][TOP] >UniRef100_UPI0000F2E4EB PREDICTED: similar to RPB11a protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2E4EB Length = 96 Score = 74.7 bits (182), Expect = 5e-12 Identities = 36/94 (38%), Positives = 54/94 (57%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN P + F+L EGE+K+ TK+ A FT EDH +GN+++ QL +FAG Sbjct: 1 MNAPLVFKSFLLFEGEKKIAINKHTKVPSACLFTINKEDHILGNIIKSQLLEAPQMLFAG 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 Y++P PLE V+ +QT ++ M+A+ DL Sbjct: 61 YKVPDPLEHKTVIPIQTTPDYHSQETFMNAIPDL 94 [138][TOP] >UniRef100_Q7RVT9 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7RVT9_NEUCR Length = 141 Score = 74.7 bits (182), Expect = 5e-12 Identities = 35/109 (32%), Positives = 64/109 (58%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 ++P+R+ F+L +GE+K++ K T + + F EDHT+GNLL L + AGY Sbjct: 10 SEPNRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAGY 69 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495 +I HP P + +++QT+G+ + +A++ A + L Y + EF + ++ Sbjct: 70 KIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 118 [139][TOP] >UniRef100_Q8ILU4 RNA polymerase small subunit, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8ILU4_PLAF7 Length = 96 Score = 73.9 bits (180), Expect = 8e-12 Identities = 38/90 (42%), Positives = 54/90 (60%) Frame = +1 Query: 223 KYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNG 402 KY + K TF F +EDHT+GN LR L + FAGY +PHP +P + V++QT G Sbjct: 5 KYYENLKNLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTG 64 Query: 403 TKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 K D + +L+DL N IML +F++A+ Sbjct: 65 -KPAIDILKESLDDLGNMCDIMLNKFNEAL 93 [140][TOP] >UniRef100_A4R2Q3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4R2Q3_MAGGR Length = 130 Score = 73.9 bits (180), Expect = 8e-12 Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 7/105 (6%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+L GE K+ +T + + FTF+ EDHT+GN+L L + + AG Sbjct: 1 MNAPDRFELFLLEPGEEKLTETINTSMSNTSDFTFKKEDHTLGNMLTEHLKQHPNVLMAG 60 Query: 346 YRIPHPLEPVMVVKVQTNG---TKSC-EDA---MMHALEDLANEY 459 Y++ HP P +++QT+G K+C DA ++H+L + E+ Sbjct: 61 YKVSHPNVPEFFLRIQTDGKVTPKACLLDACRTILHSLGQIRTEF 105 [141][TOP] >UniRef100_UPI000023DEF8 hypothetical protein FG06818.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023DEF8 Length = 239 Score = 72.8 bits (177), Expect = 2e-11 Identities = 35/96 (36%), Positives = 54/96 (56%) Frame = +1 Query: 193 FVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEP 372 F+L EGE+K++ K + + + F EDHT+GNLL L + AGY+I HP P Sbjct: 122 FLLGEGEKKIEEKVFSGMSNTSDFVLMKEDHTLGNLLSEHLKMHPNVHMAGYKIAHPNVP 181 Query: 373 VMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 + ++VQT+GT + D E L N+ ++ +EF Sbjct: 182 ELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 217 [142][TOP] >UniRef100_B0E866 DNA-directed RNA polymerase II subunit RPB11, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0E866_ENTDI Length = 112 Score = 72.4 bits (176), Expect = 2e-11 Identities = 38/108 (35%), Positives = 64/108 (59%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PD +V+ E+K+ + + + FTF EDHT GN+LR+ L + +FAG Sbjct: 1 MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTFVKEDHTAGNILRVMLLRNPHVLFAG 57 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 YR PHPL ++ + ++T+ T + + A+ A++D+ +E IM EF+ + Sbjct: 58 YRQPHPLNYIIEMTIRTDTTITPKQALEQAMDDVIHEIEIMQNEFESS 105 [143][TOP] >UniRef100_A0BUX3 Chromosome undetermined scaffold_13, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BUX3_PARTE Length = 129 Score = 72.4 bits (176), Expect = 2e-11 Identities = 38/100 (38%), Positives = 57/100 (57%) Frame = +1 Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390 E +V + + K+ +A EDHTIGNL RM L K F+GYR HPL+ + +KV Sbjct: 24 ESRVILEDEKKMNNACCVKLYLEDHTIGNLTRMNLLKQKEVTFSGYRQIHPLQHTIEIKV 83 Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510 QTNG+ DA+ +DL++E+ + EE+ + V+ H Sbjct: 84 QTNGSIKPYDAIQKTFQDLSDEFKNLEEEWARKVAEKEKH 123 [144][TOP] >UniRef100_P87123 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Schizosaccharomyces pombe RepID=RPB11_SCHPO Length = 123 Score = 72.4 bits (176), Expect = 2e-11 Identities = 37/94 (39%), Positives = 57/94 (60%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MNQP+RY + + G KV Y+ D+K +A T EDHT+ N+L QL +D+ +FAG Sbjct: 1 MNQPERY-ELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447 Y++PHPL +++VQT S + ++ A + L Sbjct: 60 YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSL 93 [145][TOP] >UniRef100_C4LXS9 RNA polymerases II subunit, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LXS9_ENTHI Length = 112 Score = 70.9 bits (172), Expect = 7e-11 Identities = 39/108 (36%), Positives = 63/108 (58%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PD +V+ E+K+ + + + FT EDHT GN+LR+ L + +FAG Sbjct: 1 MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTLVKEDHTAGNILRVMLLRNPHVLFAG 57 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 YR PHPL V+ + ++T+ T + + A+ A++D+ +E IM EF+ A Sbjct: 58 YRQPHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEFEAA 105 [146][TOP] >UniRef100_Q4U9J3 RNA polymerases I and III subunit (RPC19 homologue), putative n=1 Tax=Theileria annulata RepID=Q4U9J3_THEAN Length = 90 Score = 68.6 bits (166), Expect = 4e-10 Identities = 32/78 (41%), Positives = 48/78 (61%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF +EDHT+GN LR L VFAGY +PHP+EP M +++QT G + E + L Sbjct: 12 TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNIRIQTTGQPAVE-VFLDCL 70 Query: 439 EDLANEYHIMLEEFDQAV 492 +D+ I+ E+F++A+ Sbjct: 71 DDMVKICDILREKFEKAI 88 [147][TOP] >UniRef100_Q4N286 RNA polymerase small subunit, putative n=1 Tax=Theileria parva RepID=Q4N286_THEPA Length = 92 Score = 68.6 bits (166), Expect = 4e-10 Identities = 33/78 (42%), Positives = 48/78 (61%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF +EDHT+GN LR L VFAGY +PHP+EP M V++QT G + E + L Sbjct: 12 TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNVRIQTTGQPAVE-VFLDCL 70 Query: 439 EDLANEYHIMLEEFDQAV 492 +D+ I+ E+F++A+ Sbjct: 71 DDMVKICDILTEKFEKAM 88 [148][TOP] >UniRef100_Q4YZZ7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Plasmodium berghei str. ANKA RepID=RPB11_PLABA Length = 126 Score = 68.6 bits (166), Expect = 4e-10 Identities = 34/78 (43%), Positives = 45/78 (57%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N+P+ VLP GE KVK + K D FT + EDHTIGNL++ L D FA Y Sbjct: 8 NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66 Query: 349 RIPHPLEPVMVVKVQTNG 402 R PHPL+ V+ + ++ G Sbjct: 67 RQPHPLQNVIEITIRPKG 84 [149][TOP] >UniRef100_Q4N0T0 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva RepID=Q4N0T0_THEPA Length = 133 Score = 67.8 bits (164), Expect = 6e-10 Identities = 31/79 (39%), Positives = 48/79 (60%) Frame = +1 Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339 S +N+P+ L +G +KV++ DT+ GTF EDHT G+L+R +L D F Sbjct: 6 SLINKPETADMVELAQGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRSKLSKDDRVTF 65 Query: 340 AGYRIPHPLEPVMVVKVQT 396 GYR+PHPLE + ++++T Sbjct: 66 VGYRMPHPLENKLEIRIRT 84 [150][TOP] >UniRef100_B6JWF5 DNA-directed RNA polymerase I and III subunit Rpc19 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWF5_SCHJY Length = 123 Score = 67.8 bits (164), Expect = 6e-10 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Frame = +1 Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAG-TFTFRSEDHTIGNLLRMQLHADKSTV 336 +AM Y L +G KV A TF + EDHT+GN LR + + Sbjct: 2 AAMTDVRDYGSITLDQGLEKVTILAGHSADYTSVTFQIQKEDHTLGNALRYMIMKNPDVE 61 Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504 F GY IPHP E M +++QT T + DA+ L+DL + ++ E F++ +S ++ Sbjct: 62 FCGYSIPHPSEAKMNLRIQTKSTTTAIDALKKGLDDLMDLCDVVTESFNEQLSEST 117 [151][TOP] >UniRef100_Q4UD30 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria annulata RepID=Q4UD30_THEAN Length = 124 Score = 67.4 bits (163), Expect = 8e-10 Identities = 34/98 (34%), Positives = 56/98 (57%) Frame = +1 Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339 S +N+P+ L G +KV++ DT+ GTF EDHT G+L+R +L D F Sbjct: 6 SLINKPETADMVELAHGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRTKLSKDDRVTF 65 Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLAN 453 GYR+PHPLE + ++++T T + ++ A+ ++ N Sbjct: 66 VGYRMPHPLENKLEIRIRTK-TDNPFTVILSAITNIRN 102 [152][TOP] >UniRef100_B3LAK8 RNA polymerase small subunit, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAK8_PLAKH Length = 94 Score = 67.4 bits (163), Expect = 8e-10 Identities = 34/78 (43%), Positives = 49/78 (62%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G + + + AL Sbjct: 17 TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTG-EPAVNILKDAL 75 Query: 439 EDLANEYHIMLEEFDQAV 492 +DL+N IML +FD AV Sbjct: 76 DDLSNICDIMLNKFDSAV 93 [153][TOP] >UniRef100_Q4XS21 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Plasmodium chabaudi RepID=RPB11_PLACH Length = 126 Score = 67.0 bits (162), Expect = 1e-09 Identities = 33/78 (42%), Positives = 44/78 (56%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N+P+ VLP GE KVK + K D FT + EDHTIGNL++ L D FA Y Sbjct: 8 NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66 Query: 349 RIPHPLEPVMVVKVQTNG 402 R PHPL+ + + ++ G Sbjct: 67 RQPHPLQNAIEITIRPKG 84 [154][TOP] >UniRef100_C3YY41 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YY41_BRAFL Length = 117 Score = 66.6 bits (161), Expect = 1e-09 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKY----KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKST 333 MN P + F+L EGE+K + AD +L S+ I +R QL D Sbjct: 1 MNAPPTFESFLLFEGEKKSSFLATIDADARLVSV---LVASQILEIAKSIRQQLLKDPQV 57 Query: 334 VFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 +FAGY++PHPLE V+++QT S ++A +A+ DL +E ++ E F AV Sbjct: 58 IFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 110 [155][TOP] >UniRef100_A4I2U7 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania infantum RepID=A4I2U7_LEIIN Length = 134 Score = 66.6 bits (161), Expect = 1e-09 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +1 Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354 PD V LP G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+ Sbjct: 16 PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72 Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 PHP + + ++VQT NGT + A AL+D N LE F++ Sbjct: 73 PHPTKHNVELRVQTASNGTDAPVPAPKKALQDAINGCLKDLEVFEE 118 [156][TOP] >UniRef100_C4R3Z5 RNA polymerase II subunit B12.5 n=1 Tax=Pichia pastoris GS115 RepID=C4R3Z5_PICPG Length = 118 Score = 66.6 bits (161), Expect = 1e-09 Identities = 33/107 (30%), Positives = 56/107 (52%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 MN PDR+ F+LP+ K+K D+++ + F EDHT+ NLLR +L F Sbjct: 1 MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA 60 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 Y++ HPL V+++QT + A+ A + N+ + +F++ Sbjct: 61 YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNE 107 [157][TOP] >UniRef100_Q4YUC7 RNA polymerase small subunit, putative n=1 Tax=Plasmodium berghei RepID=Q4YUC7_PLABE Length = 96 Score = 65.9 bits (159), Expect = 2e-09 Identities = 35/92 (38%), Positives = 54/92 (58%) Frame = +1 Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405 Y + K TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G Sbjct: 6 YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTG- 64 Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501 K + + +L+DL+N I+LE+F A+ +A Sbjct: 65 KPAINILKDSLDDLSNICTILLEKFKNALESA 96 [158][TOP] >UniRef100_C1BN59 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Caligus rogercresseyi RepID=C1BN59_9MAXI Length = 102 Score = 65.5 bits (158), Expect = 3e-09 Identities = 29/78 (37%), Positives = 48/78 (61%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF F+ E+HT+GN LR + + +F GY IPHP E M++++QT + +DA+ L Sbjct: 23 TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMLLRIQTVSSVPTQDALRRGL 82 Query: 439 EDLANEYHIMLEEFDQAV 492 EDL + ++ +F+ A+ Sbjct: 83 EDLKDMCSVVSSKFNSAL 100 [159][TOP] >UniRef100_B3LBL0 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LBL0_PLAKH Length = 126 Score = 65.5 bits (158), Expect = 3e-09 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N+P+ VLP GE+KV + K D FT + EDHTIGNL++ L D FA Y Sbjct: 8 NKPENIDLLVLPPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPQVTFAAY 66 Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450 R PHPL+ + + ++ G K D + L D++ Sbjct: 67 RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103 [160][TOP] >UniRef100_B0YC94 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Aspergillus fumigatus A1163 RepID=B0YC94_ASPFC Length = 229 Score = 65.1 bits (157), Expect = 4e-09 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 54/162 (33%) Frame = +1 Query: 184 YVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNLL 303 + FVL GE KV+ + DT+ + + FTF EDHT+GNLL Sbjct: 53 FESFVLSPGEEKVEVETDTRKFFNQTSRCKSTTTDLMHLGIPSSSIFTFNKEDHTLGNLL 112 Query: 304 RMQLHADKSTVFAGYR----------------------------------IPHPLEPVMV 381 R +L + +FAGY+ +PHPL P Sbjct: 113 RSRLLQNSHVIFAGYKVCPPMEAVFSSILFEVLGAFLESFGMHGSDELSQVPHPLVPKFE 172 Query: 382 VKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507 ++VQT+G + +DA++ A DL + I+ EF + M Sbjct: 173 LRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 214 [161][TOP] >UniRef100_C1E3U1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3U1_9CHLO Length = 100 Score = 64.7 bits (156), Expect = 5e-09 Identities = 32/79 (40%), Positives = 47/79 (59%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TFT + EDHT+GN +R L+ + AGY +PHP+E + V+VQT G + AM AL Sbjct: 7 TFTLKDEDHTMGNAVRYMLNKNPQVSLAGYSVPHPMEKSVNVRVQTTGEVTATAAMRDAL 66 Query: 439 EDLANEYHIMLEEFDQAVS 495 D+ + + + FD AV+ Sbjct: 67 LDIISVCDHVHDTFDTAVA 85 [162][TOP] >UniRef100_Q4FYG3 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania major strain Friedlin RepID=Q4FYG3_LEIMA Length = 134 Score = 64.7 bits (156), Expect = 5e-09 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%) Frame = +1 Query: 208 GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVK 387 G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+PHP + + ++ Sbjct: 24 GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELR 83 Query: 388 VQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 VQT NGT + A AL+D + LE F++ Sbjct: 84 VQTASNGTDAPVPAPKKALQDAVDGCLKDLEVFEE 118 [163][TOP] >UniRef100_C1BP53 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Caligus rogercresseyi RepID=C1BP53_9MAXI Length = 102 Score = 64.7 bits (156), Expect = 5e-09 Identities = 29/78 (37%), Positives = 47/78 (60%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF F+ E+HT+GN LR + + +F GY IPHP E M +++QT + +DA+ L Sbjct: 23 TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMPLRIQTVSSVPAQDALRRGL 82 Query: 439 EDLANEYHIMLEEFDQAV 492 EDL + ++ +F+ A+ Sbjct: 83 EDLKDMCSVVSSKFNSAL 100 [164][TOP] >UniRef100_A5K177 RNA polymerase small subunit, putative n=1 Tax=Plasmodium vivax RepID=A5K177_PLAVI Length = 97 Score = 64.7 bits (156), Expect = 5e-09 Identities = 32/78 (41%), Positives = 48/78 (61%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G + + + +L Sbjct: 17 TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTGEPAI-NILKDSL 75 Query: 439 EDLANEYHIMLEEFDQAV 492 +DL+N IML +FD V Sbjct: 76 DDLSNICDIMLNKFDSVV 93 [165][TOP] >UniRef100_C1N3U7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N3U7_9CHLO Length = 109 Score = 64.3 bits (155), Expect = 7e-09 Identities = 31/78 (39%), Positives = 46/78 (58%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TFT + EDHT+GN +R L+ + AGY +PHP+E + V+VQT G + AM AL Sbjct: 7 TFTLKDEDHTMGNAIRYMLNKNPQVALAGYSVPHPMERSVNVRVQTTGEVTATAAMRDAL 66 Query: 439 EDLANEYHIMLEEFDQAV 492 D+ + + + FD A+ Sbjct: 67 LDIISVCDHVHDTFDLAI 84 [166][TOP] >UniRef100_Q4Y0J9 RNA polymerase small subunit, putative n=1 Tax=Plasmodium chabaudi RepID=Q4Y0J9_PLACH Length = 96 Score = 64.3 bits (155), Expect = 7e-09 Identities = 34/92 (36%), Positives = 54/92 (58%) Frame = +1 Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405 Y + K TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G Sbjct: 6 YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTGE 65 Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501 + + + +L+DL+N IML++F+ A+ A Sbjct: 66 PAI-NILKDSLDDLSNICTIMLDKFNDALENA 96 [167][TOP] >UniRef100_A4HFT2 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania braziliensis RepID=A4HFT2_LEIBR Length = 134 Score = 64.3 bits (155), Expect = 7e-09 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +1 Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354 PD V LP G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+ Sbjct: 16 PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72 Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 PHP + + ++VQT NGT + A AL+D + LE F++ Sbjct: 73 PHPTKHNVELRVQTGSNGTDTPIPAPKKALQDAIDGCLKDLEMFEE 118 [168][TOP] >UniRef100_B6HGB3 Pc20g11790 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HGB3_PENCW Length = 137 Score = 64.3 bits (155), Expect = 7e-09 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + + F GY IPHP +P M V++QTN T + +A+ Sbjct: 45 AASFQFEGEGHTMGNALRYAIMKNPAVEFCGYTIPHPSDPKMNVRIQTNDTTTALEALEK 104 Query: 433 ALEDLANEYHIMLEEFDQA 489 +DL + ++ E+F A Sbjct: 105 GFDDLMDLCDVVTEKFTAA 123 [169][TOP] >UniRef100_Q4E3C1 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi RepID=Q4E3C1_TRYCR Length = 133 Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%) Frame = +1 Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 +G RK+ + +K+ ++ F EDHT+ NLLRM+LH D AGYR+PHP + + + Sbjct: 24 KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83 Query: 385 KVQTNG------TKSCEDAMMHALE 441 +VQT+ S +DA++ A++ Sbjct: 84 RVQTSSDGSGRPIPSPKDALLKAID 108 [170][TOP] >UniRef100_Q4DI42 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi RepID=Q4DI42_TRYCR Length = 133 Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%) Frame = +1 Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 +G RK+ + +K+ ++ F EDHT+ NLLRM+LH D AGYR+PHP + + + Sbjct: 24 KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83 Query: 385 KVQTNG------TKSCEDAMMHALE 441 +VQT+ S +DA++ A++ Sbjct: 84 RVQTSSDGSGRPIPSPKDALLKAID 108 [171][TOP] >UniRef100_Q0UWS5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UWS5_PHANO Length = 203 Score = 63.2 bits (152), Expect = 1e-08 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 20/120 (16%) Frame = +1 Query: 181 RYVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNL 300 R+ F+L +G++K++YK +T+ + + G FTF EDHT+GNL Sbjct: 59 RFELFLLDDGQQKIEYKEETRKSTYHPALPSDTQANPTTLGVPNTGIFTFNKEDHTLGNL 118 Query: 301 LRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480 + +L F+ Y++PHPL ++V T+G+ + +DA++ + + + F Sbjct: 119 ISQRLLKYPYITFSAYKVPHPLFATFELRVSTDGSITPKDAIIACCRQVVQDLEDLKRSF 178 [172][TOP] >UniRef100_A5JZ41 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1 Tax=Plasmodium vivax RepID=A5JZ41_PLAVI Length = 126 Score = 62.4 bits (150), Expect = 3e-08 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N+P+ VL GE+KV + K D FT + EDHTIGNL++ L D FA Y Sbjct: 8 NKPENIDLLVLAPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPKVTFAAY 66 Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450 R PHPL+ + + ++ G K D + L D++ Sbjct: 67 RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103 [173][TOP] >UniRef100_C0PNM4 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C0PNM4_MAIZE Length = 88 Score = 62.0 bits (149), Expect = 3e-08 Identities = 26/50 (52%), Positives = 36/50 (72%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQL 315 MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+G+ Q+ Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGSCTETQM 50 [174][TOP] >UniRef100_A7TTT6 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TTT6_VANPO Length = 128 Score = 62.0 bits (149), Expect = 3e-08 Identities = 31/111 (27%), Positives = 60/111 (54%) Frame = +1 Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339 + + + D ++ + E + K+ +A ++ +F EDHT+GN LR + + F Sbjct: 15 TVIEEVDVEMESTVDEDKIKILPQATSEDGTCASFQIMDEDHTLGNALRYIIMKNPEVEF 74 Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 GY IPHP E ++ +++QT G+ + +A+ L DL + ++ E+F Q + Sbjct: 75 CGYSIPHPSENLLNLRIQTYGSTTAVEALQKGLGDLMDMCDVVEEKFTQRI 125 [175][TOP] >UniRef100_Q22RW2 DNA-directed RNA polymerase I subunit D n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22RW2_TETTH Length = 150 Score = 61.6 bits (148), Expect = 4e-08 Identities = 33/94 (35%), Positives = 51/94 (54%) Frame = +1 Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390 E K+ + K + T+TF EDHT+GN +R L K F GY IPHP E M +++ Sbjct: 46 EEKLVIDQNEKDRTCATYTFYDEDHTLGNTVRYMLVKRKDVEFCGYTIPHPSENKMNLRL 105 Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 QT K+ + + L+ LA ++ ++FD A+ Sbjct: 106 QTI-KKNSNEVLKEGLDSLAGLCDVLNDKFDAAM 138 [176][TOP] >UniRef100_A4YHV0 DNA-directed RNA polymerase subunit L n=1 Tax=Metallosphaera sedula DSM 5348 RepID=RPOL_METS5 Length = 90 Score = 61.6 bits (148), Expect = 4e-08 Identities = 28/72 (38%), Positives = 47/72 (65%) Frame = +1 Query: 271 RSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLA 450 + EDHT+GNL+ +L + K + A Y +PHPL+ +V+K++T+GT S +A+ A+ED+ Sbjct: 18 QGEDHTLGNLIAGRLRSVKGVILATYYLPHPLKDELVIKIKTDGTISPREALNRAIEDVK 77 Query: 451 NEYHIMLEEFDQ 486 L+E +Q Sbjct: 78 VLGESFLDELEQ 89 [177][TOP] >UniRef100_Q8IER7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Plasmodium falciparum 3D7 RepID=RPB11_PLAF7 Length = 126 Score = 61.6 bits (148), Expect = 4e-08 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 N+P+ VL GE+KV K D F + EDHTIGNL+++QL D +FA Y Sbjct: 8 NKPETVDLLVLAPGEKKVTCTISDK-GDCNIFVIKLEDHTIGNLIKIQLCQDPKVLFAAY 66 Query: 349 RIPHPLEPVMVVKVQTNG 402 R PHPL+ + + ++ G Sbjct: 67 RQPHPLQNAIEITIKPKG 84 [178][TOP] >UniRef100_Q01D46 Trithorax-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D46_OSTTA Length = 2007 Score = 61.2 bits (147), Expect = 6e-08 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Frame = +1 Query: 232 ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK- 408 A T TFT EDHT+GN LR L+A+ S GY PHP+E + V+VQT+G + Sbjct: 1912 APTAANAEATFTLEGEDHTLGNALRYVLNANPSVTLCGYSAPHPMERRVNVRVQTHGREG 1971 Query: 409 -SCEDAMMHALEDLANEYHIMLEEFDQAVSA 498 + AM AL D+ + + E +++A A Sbjct: 1972 ATARGAMRDALLDVISVCDHVHESYEKAERA 2002 [179][TOP] >UniRef100_A9SFX7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFX7_PHYPA Length = 118 Score = 61.2 bits (147), Expect = 6e-08 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF+ EDHT+GN LR L+ D F GY +PHP E + V+VQT G + D + AL Sbjct: 13 TFSISDEDHTLGNSLRFVLNKDPRVAFCGYSVPHPSETRINVRVQTTGVPA-RDVLKDAL 71 Query: 439 EDL-------ANEYHIMLEEF--DQAVSAASMH*DAAAVTAEWRGGFKCP 561 DL + ++ +E F +Q V+ SM + VT++ G K P Sbjct: 72 NDLMAMNQHVSTTFNRAVETFKANQGVNELSM---KSGVTSQHSGSVKKP 118 [180][TOP] >UniRef100_C5KJH4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KJH4_9ALVE Length = 256 Score = 61.2 bits (147), Expect = 6e-08 Identities = 27/64 (42%), Positives = 43/64 (67%) Frame = +1 Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435 GT+ ++EDHT+GN +R L + FAGY +PHP EP + ++VQT + +++M+ A Sbjct: 9 GTYQLKNEDHTLGNSVRYVLAKNPKVDFAGYSVPHPNEPFVNIRVQTYPGMTADESMIWA 68 Query: 436 LEDL 447 LE+L Sbjct: 69 LEEL 72 [181][TOP] >UniRef100_Q6C4D6 YALI0E27676p n=1 Tax=Yarrowia lipolytica RepID=Q6C4D6_YARLI Length = 140 Score = 61.2 bits (147), Expect = 6e-08 Identities = 30/83 (36%), Positives = 46/83 (55%) Frame = +1 Query: 247 KDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAM 426 K A +F F EDHTIGN L+ + + F GY IPHP E + +++QT G + +A+ Sbjct: 52 KTACSFQFTEEDHTIGNALQYIIMKNPEVEFCGYSIPHPSEAKLNIRIQTYGDITAIEAL 111 Query: 427 MHALEDLANEYHIMLEEFDQAVS 495 L+DL ++ +F AV+ Sbjct: 112 QKGLDDLIQACDVVKNKFTDAVT 134 [182][TOP] >UniRef100_A3LQW8 RNA polymerase I and III subunit n=1 Tax=Pichia stipitis RepID=A3LQW8_PICST Length = 119 Score = 61.2 bits (147), Expect = 6e-08 Identities = 28/82 (34%), Positives = 48/82 (58%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F EDHT+GN LR + + F GY IPHP E + +++QT G + +A+ Sbjct: 30 AASFQILEEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITAVEALHQ 89 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++LA ++ ++F++ +SA Sbjct: 90 GLDNLAELCTVIGDKFEEKISA 111 [183][TOP] >UniRef100_A5DL81 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DL81_PICGU Length = 123 Score = 60.8 bits (146), Expect = 7e-08 Identities = 30/82 (36%), Positives = 46/82 (56%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A TF EDHT+GN LR + + F GY IPHP E M +++QT G S +A+ Sbjct: 34 AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ ++ +F + +SA Sbjct: 94 GLDNLSELCTVIETKFSEKISA 115 [184][TOP] >UniRef100_C5DRN5 ZYRO0B09878p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DRN5_ZYGRC Length = 130 Score = 60.5 bits (145), Expect = 1e-07 Identities = 33/108 (30%), Positives = 55/108 (50%) Frame = +1 Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348 ++PDR +LP+ A ++ +F EDHT+GN LR + + F GY Sbjct: 28 DEPDREKIKILPQ--------ATSEDGTCASFQIAEEDHTLGNALRYMIMKNPDVEFCGY 79 Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 IPHP E ++ ++VQT G + D + L+DL + + ++F Q + Sbjct: 80 SIPHPSENLLNIRVQTYGNVTAVDVLHKGLQDLMDLCDAVEDKFTQKI 127 [185][TOP] >UniRef100_B2WFP6 RNA polymerase II subunit n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WFP6_PYRTR Length = 183 Score = 60.5 bits (145), Expect = 1e-07 Identities = 26/65 (40%), Positives = 44/65 (67%) Frame = +1 Query: 157 RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTV 336 ++ M +R+ F+L EG++KV+ KA+T++ + FTF EDHT+GNLL +L + + + Sbjct: 73 KADMGPANRFELFLLDEGQQKVEEKAETRVPNTAVFTFNKEDHTLGNLLSARLQKNPAIL 132 Query: 337 FAGYR 351 FA Y+ Sbjct: 133 FAAYK 137 [186][TOP] >UniRef100_A9NNU7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NNU7_PICSI Length = 107 Score = 60.1 bits (144), Expect = 1e-07 Identities = 32/80 (40%), Positives = 46/80 (57%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + TF F EDHT+GN LR L+ D F GY IPHP + + ++VQT G + +D + Sbjct: 11 SSTFAFNDEDHTLGNSLRYVLNHDPRVEFCGYSIPHPSDNRVNIRVQTTGDPA-KDVLKD 69 Query: 433 ALEDLANEYHIMLEEFDQAV 492 AL+DL + + F +AV Sbjct: 70 ALQDLMVVCQQVRQTFGKAV 89 [187][TOP] >UniRef100_B9WL57 DNA-directed RNA polymerase subunit, common to RNA polymerases I and III, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WL57_CANDC Length = 130 Score = 60.1 bits (144), Expect = 1e-07 Identities = 29/82 (35%), Positives = 47/82 (57%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+ Sbjct: 41 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 100 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ + ++FD+AV A Sbjct: 101 GLDNLSELCSAIEDKFDEAVKA 122 [188][TOP] >UniRef100_Q386T9 DNA-directed RNA polymerase II, putative n=2 Tax=Trypanosoma brucei RepID=Q386T9_9TRYP Length = 132 Score = 59.7 bits (143), Expect = 2e-07 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%) Frame = +1 Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393 RK+ + +K+ ++ F EDHT+ NLLRM+LH + AGYR+PHP + + ++VQ Sbjct: 26 RKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQ 85 Query: 394 T--NGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 T +GT AL + LEEF+ A Sbjct: 86 TSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGA 119 [189][TOP] >UniRef100_B9PJ94 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1 Tax=Toxoplasma gondii GT1 RepID=B9PJ94_TOXGO Length = 178 Score = 59.7 bits (143), Expect = 2e-07 Identities = 36/101 (35%), Positives = 52/101 (51%) Frame = +1 Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378 L G KV++ DT+ GTF F ED+TIG ++R L D F G R PHPLEP + Sbjct: 19 LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78 Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501 +++QT + S ++ +L ++ F AV AA Sbjct: 79 ELRIQT-VSSSPFTLVLESLRKRKAGLSLLKARFKAAVGAA 118 [190][TOP] >UniRef100_P28000 DNA-directed RNA polymerases I and III subunit RPAC2 n=5 Tax=Saccharomyces cerevisiae RepID=RPAC2_YEAST Length = 142 Score = 59.7 bits (143), Expect = 2e-07 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Frame = +1 Query: 202 PEGER-KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378 P+ E+ K+ +A ++ + +F EDHT+GN LR + + F GY IPHP E ++ Sbjct: 42 PDREKIKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLL 101 Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498 +++QT G + DA+ L+DL + ++ +F + + + Sbjct: 102 NIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIKS 141 [191][TOP] >UniRef100_B6K9P6 RNA polymerase II subunit RPB11, putative n=2 Tax=Toxoplasma gondii RepID=B6K9P6_TOXGO Length = 178 Score = 59.3 bits (142), Expect = 2e-07 Identities = 29/66 (43%), Positives = 39/66 (59%) Frame = +1 Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378 L G KV++ DT+ GTF F ED+TIG ++R L D F G R PHPLEP + Sbjct: 19 LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78 Query: 379 VVKVQT 396 +++QT Sbjct: 79 ELRIQT 84 [192][TOP] >UniRef100_A7AT13 RNA polymerase small subunit protein, putative n=1 Tax=Babesia bovis RepID=A7AT13_BABBO Length = 96 Score = 59.3 bits (142), Expect = 2e-07 Identities = 27/77 (35%), Positives = 45/77 (58%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF+ +EDHT+GN +R L + FAGY +PHP++P + +++QT G K + L Sbjct: 12 TFSIENEDHTLGNAVRTLLVEREDVFFAGYSVPHPMQPEVNIRIQTTG-KPAVKIFVECL 70 Query: 439 EDLANEYHIMLEEFDQA 489 +DL +++ + F A Sbjct: 71 DDLVEVCNVLTKAFIDA 87 [193][TOP] >UniRef100_A5DS75 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1 Tax=Lodderomyces elongisporus RepID=A5DS75_LODEL Length = 135 Score = 59.3 bits (142), Expect = 2e-07 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%) Frame = +1 Query: 211 ERKVKYKADT------KLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTVFAGYRIPHPL 366 E ++ Y AD L+D + +F+ EDHT+GN LR + + F GY IPHP Sbjct: 24 EEEIIYDADKIRILPGSLEDGTSASFQILDEDHTLGNALRYMIMKNPEVEFCGYSIPHPS 83 Query: 367 EPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486 E + V++QT G S +A+ L++L+ ++ E+F++ Sbjct: 84 ENKLNVRIQTYGNISAVEALHQGLDNLSELCDVVEEKFEE 123 [194][TOP] >UniRef100_Q54ES6 DNA-directed RNA polymerases I and III subunit rpc19 n=1 Tax=Dictyostelium discoideum RepID=RPC19_DICDI Length = 116 Score = 59.3 bits (142), Expect = 2e-07 Identities = 27/81 (33%), Positives = 45/81 (55%) Frame = +1 Query: 250 DAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMM 429 D TF F EDHT+GN L L + F+GY IPHP + M +++QT + +++++ Sbjct: 34 DCATFIFTDEDHTLGNALHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKSNITAQESLL 93 Query: 430 HALEDLANEYHIMLEEFDQAV 492 L D+ + + E F+ A+ Sbjct: 94 QGLTDIKDISRHIFETFNNAL 114 [195][TOP] >UniRef100_A4HGR0 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania braziliensis RepID=A4HGR0_LEIBR Length = 137 Score = 58.9 bits (141), Expect = 3e-07 Identities = 34/87 (39%), Positives = 46/87 (52%) Frame = +1 Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417 T + TF EDHT+GN LR L + + AGY IPHPLEP M++ VQ + Sbjct: 42 TDSESTAVVTFSHEDHTLGNPLRHVLMQNVAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99 Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSA 498 +A+ H LE LA + FD+ + A Sbjct: 100 EAVAHGLERLAEICDDTISSFDKCMVA 126 [196][TOP] >UniRef100_Q6CIV1 KLLA0F23760p n=1 Tax=Kluyveromyces lactis RepID=Q6CIV1_KLULA Length = 127 Score = 58.9 bits (141), Expect = 3e-07 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Frame = +1 Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTV 336 A Q D+ Q K+K + +D + +FR EDHT+GN LR + + Sbjct: 13 AAEQNDQVDQVEEEVDSEKIKLLTEATSEDGTSASFRITDEDHTLGNTLRYMIMKNPEVE 72 Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 F GY IPHP E + +++QT G + +A+ L DL + + + F Q + Sbjct: 73 FCGYSIPHPSENFLHIRIQTYGKITAVEALHKGLGDLMDMCDAVEDRFTQRI 124 [197][TOP] >UniRef100_UPI000180B7C9 PREDICTED: similar to LOC494863 protein n=1 Tax=Ciona intestinalis RepID=UPI000180B7C9 Length = 109 Score = 58.5 bits (140), Expect = 4e-07 Identities = 31/78 (39%), Positives = 45/78 (57%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF +EDHT+GN LR L + F GY IPHP E M +++QT G S +A+ L Sbjct: 25 TFIIHNEDHTLGNALRYILMKNPDIEFCGYSIPHPAENKMNLRIQTRGI-SATEALKKGL 83 Query: 439 EDLANEYHIMLEEFDQAV 492 +DL + +L+ F+ +V Sbjct: 84 KDLNSVCEHILKTFESSV 101 [198][TOP] >UniRef100_UPI000151BC99 hypothetical protein PGUG_04032 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151BC99 Length = 123 Score = 58.5 bits (140), Expect = 4e-07 Identities = 29/82 (35%), Positives = 45/82 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A TF EDHT+GN LR + + F GY IPHP E M +++QT G S +A+ Sbjct: 34 AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ ++ +F + + A Sbjct: 94 GLDNLSELCTVIETKFSEKILA 115 [199][TOP] >UniRef100_Q755Q7 AFL220Cp n=1 Tax=Eremothecium gossypii RepID=Q755Q7_ASHGO Length = 135 Score = 58.5 bits (140), Expect = 4e-07 Identities = 27/77 (35%), Positives = 43/77 (55%) Frame = +1 Query: 262 FTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALE 441 F EDHT+GN LR + + F GY IPHP E + +++QT G + DA+ L+ Sbjct: 56 FQITDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENFLNIRIQTYGKVTAVDALHKGLQ 115 Query: 442 DLANEYHIMLEEFDQAV 492 DL + ++ ++F Q + Sbjct: 116 DLMDMCDVVEDKFTQRI 132 [200][TOP] >UniRef100_Q59LT9 Potential RNA Polymerase I and III shared subunit Rpc19 n=1 Tax=Candida albicans RepID=Q59LT9_CANAL Length = 131 Score = 58.5 bits (140), Expect = 4e-07 Identities = 28/82 (34%), Positives = 46/82 (56%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+ Sbjct: 42 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 101 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ + ++FD A+ A Sbjct: 102 GLDNLSELCGAIEDKFDDAIKA 123 [201][TOP] >UniRef100_Q0CH54 Putative uncharacterized protein n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CH54_ASPTN Length = 142 Score = 58.5 bits (140), Expect = 4e-07 Identities = 29/82 (35%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+ Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L+ L + ++ E+F A A Sbjct: 110 GLDSLMDLCDVVTEKFTDARDA 131 [202][TOP] >UniRef100_C4YL76 DNA-directed RNA polymerases I and III 14 kDa polypeptide n=1 Tax=Candida albicans RepID=C4YL76_CANAL Length = 133 Score = 58.5 bits (140), Expect = 4e-07 Identities = 28/82 (34%), Positives = 46/82 (56%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+ Sbjct: 44 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 103 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ + ++FD A+ A Sbjct: 104 GLDNLSELCGAIEDKFDDAIKA 125 [203][TOP] >UniRef100_B8C8G2 Small RNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8G2_THAPS Length = 83 Score = 58.2 bits (139), Expect = 5e-07 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK-SCEDAMMHA 435 TF EDHT+GN LR L D FAGY +PHP EPV+ ++VQTN + +A+ A Sbjct: 4 TFVLGDEDHTLGNALRHVLINDARVDFAGYCVPHPSEPVVHLRVQTNEKPLTAIEALKEA 63 Query: 436 LEDLANEYHIMLEEFD 483 L+ + LE+ + Sbjct: 64 CSTLSKQCDFFLEQLE 79 [204][TOP] >UniRef100_Q4PFC9 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PFC9_USTMA Length = 164 Score = 58.2 bits (139), Expect = 5e-07 Identities = 30/84 (35%), Positives = 47/84 (55%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A TF + EDHT+GN LR + D F GY PHP E + +++Q S DA+ Sbjct: 33 AVTFCLKEEDHTLGNSLRYIIMKDPRVEFCGYSNPHPSENKIHLRIQMYDNASALDALRD 92 Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504 A+E+L + + E +D+++SA + Sbjct: 93 AIENLDQLFAAIGEAYDRSLSAGN 116 [205][TOP] >UniRef100_C0NZW5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NZW5_AJECG Length = 137 Score = 58.2 bits (139), Expect = 5e-07 Identities = 30/82 (36%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L+DL N + E F +A +A Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130 [206][TOP] >UniRef100_B8MSM4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MSM4_TALSN Length = 136 Score = 58.2 bits (139), Expect = 5e-07 Identities = 30/98 (30%), Positives = 53/98 (54%) Frame = +1 Query: 196 VLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPV 375 V+ GE ++ + + A +F F+ E HT+GN LR + + + F GY IPHP E Sbjct: 26 VIEHGENRITILSGAT-ETAASFQFKEEGHTLGNALRYVIMKNPAVEFCGYTIPHPSEAK 84 Query: 376 MVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 M +++QT + +A+ L+DL + ++ ++F A Sbjct: 85 MNLRIQTYENTTAIEALEKGLDDLMDLCDVVTDKFTVA 122 [207][TOP] >UniRef100_A6RF11 Predicted protein n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6RF11_AJECN Length = 137 Score = 58.2 bits (139), Expect = 5e-07 Identities = 30/82 (36%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L+DL N + E F +A +A Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130 [208][TOP] >UniRef100_UPI00003BD255 hypothetical protein DEHA0A13409g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD255 Length = 134 Score = 57.8 bits (138), Expect = 6e-07 Identities = 28/82 (34%), Positives = 45/82 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+ Sbjct: 45 AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 104 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ + E+F + + A Sbjct: 105 GLDNLSELCSTIEEKFSEKIEA 126 [209][TOP] >UniRef100_Q2HQ74 RNA polymerase I subunit RPC19 n=1 Tax=Trypanosoma brucei brucei RepID=Q2HQ74_TRYBB Length = 134 Score = 57.8 bits (138), Expect = 6e-07 Identities = 40/113 (35%), Positives = 58/113 (51%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 +N+ D + E ++ AD++ A T TF EDHT+GN LR + D S AG Sbjct: 19 LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504 Y IPHPLE M + VQ+ ++ + + LE LA L++F+ V A S Sbjct: 77 YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKKFNACVEAIS 127 [210][TOP] >UniRef100_B6KBV3 DNA-directed RNA polymerases I and III subunit RPAC2, putative n=3 Tax=Toxoplasma gondii RepID=B6KBV3_TOXGO Length = 129 Score = 57.8 bits (138), Expect = 6e-07 Identities = 29/78 (37%), Positives = 45/78 (57%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TFT EDHT+GN +R L FAGY +PHP +P M +++QT G +S + + Sbjct: 38 TFTLTGEDHTLGNTIRSILVRKPGVEFAGYSVPHPTQPEMNIRLQTTG-ESAMQLLRESF 96 Query: 439 EDLANEYHIMLEEFDQAV 492 +DLA+ + +D+A+ Sbjct: 97 DDLASICDHLDTLYDEAL 114 [211][TOP] >UniRef100_Q6BY26 DEHA2A12980p n=1 Tax=Debaryomyces hansenii RepID=Q6BY26_DEBHA Length = 129 Score = 57.8 bits (138), Expect = 6e-07 Identities = 28/82 (34%), Positives = 45/82 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+ Sbjct: 40 AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 99 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L++L+ + E+F + + A Sbjct: 100 GLDNLSELCSTIEEKFSEKIEA 121 [212][TOP] >UniRef100_B2VVA3 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VVA3_PYRTR Length = 126 Score = 57.8 bits (138), Expect = 6e-07 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR +H + F GY IPHP E M +++QT S + Sbjct: 38 AASFQFDDEDHTLGNALRYIIHKNPDVEFCGYSIPHPSEAKMNLRIQTYDGASVYTVLEK 97 Query: 433 ALEDL-------ANEYHIMLEEF 480 LEDL +Y I +EF Sbjct: 98 GLEDLMAMCDIVEQKYTIARDEF 120 [213][TOP] >UniRef100_A1CM75 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Aspergillus clavatus RepID=A1CM75_ASPCL Length = 142 Score = 57.8 bits (138), Expect = 6e-07 Identities = 29/82 (35%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+ Sbjct: 50 AASFQFEGEGHTLGNALRYTIMKNPEVEFCGYTIPHPSEAKMNLRIQTYDTTNAVEALEK 109 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 LE L + ++ ++F A A Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131 [214][TOP] >UniRef100_UPI0001924FE8 PREDICTED: similar to polymerase (RNA) I polypeptide D, 16kDa n=1 Tax=Hydra magnipapillata RepID=UPI0001924FE8 Length = 127 Score = 57.4 bits (137), Expect = 8e-07 Identities = 30/78 (38%), Positives = 44/78 (56%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF F +EDHTIGN LR + + + GY PHP EP + +++QT+ + DA+ L Sbjct: 28 TFVFHNEDHTIGNSLRYMIMKNPEVQYCGYSNPHPSEPKINLRIQTHKI-AAPDALQKGL 86 Query: 439 EDLANEYHIMLEEFDQAV 492 DL N +L F ++V Sbjct: 87 LDLQNVCDHVLATFQKSV 104 [215][TOP] >UniRef100_UPI00017F079B PREDICTED: similar to DNA-directed RNA polymerases I and III subunit RPAC2 (RNA polymerases I and III subunit AC2) (DNA-directed RNA polymerase I subunit D) (DNA-directed RNA polymerase I 16 kDa polypeptide) (RPA16) (RPC16) (hRPA19) (AC19) n=1 Tax=Sus scrofa RepID=UPI00017F079B Length = 133 Score = 57.4 bits (137), Expect = 8e-07 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Frame = +1 Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369 + EGERK + A + TF EDHT+GN LR + + F GY HP E Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77 Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510 + +++QT G + L +L N +L++F+ ++ A H Sbjct: 78 SKINLRIQTRGALPAVEPFQRGLTELMNVCQHVLDKFEASIKAYKDH 124 [216][TOP] >UniRef100_D0A874 DNA-dependent RNA polymerases, putative n=2 Tax=Trypanosoma brucei RepID=D0A874_TRYBG Length = 134 Score = 57.4 bits (137), Expect = 8e-07 Identities = 40/113 (35%), Positives = 57/113 (50%) Frame = +1 Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345 +N+ D + E ++ AD++ A T TF EDHT+GN LR + D S AG Sbjct: 19 LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76 Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504 Y IPHPLE M + VQ+ ++ + + LE LA L+ F+ V A S Sbjct: 77 YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKSFNACVEAIS 127 [217][TOP] >UniRef100_Q6FLF2 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FLF2_CANGA Length = 137 Score = 57.4 bits (137), Expect = 8e-07 Identities = 27/80 (33%), Positives = 45/80 (56%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 +F EDHT+GN LR + + F GY IPHP E ++ +++QT G + DA+ L Sbjct: 58 SFQIAQEDHTLGNALRYIIMKNPEVEFCGYSIPHPSEELLNLRIQTYGNITAVDALQKGL 117 Query: 439 EDLANEYHIMLEEFDQAVSA 498 +DL + + ++F Q + + Sbjct: 118 DDLIDLCDAVKDKFVQRLQS 137 [218][TOP] >UniRef100_B3S798 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3S798_TRIAD Length = 92 Score = 57.0 bits (136), Expect = 1e-06 Identities = 26/88 (29%), Positives = 46/88 (52%) Frame = +1 Query: 229 KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK 408 KA + +D TF E+HT+GN +R + + T GY +PHP + + ++++TN K Sbjct: 2 KASSNRQDCQTFVLHGENHTLGNAVRYLIMKNPETKLCGYSVPHPSQHKINLRIETNNEK 61 Query: 409 SCEDAMMHALEDLANEYHIMLEEFDQAV 492 + L+DL +L+ FD ++ Sbjct: 62 DAIEVFRTGLQDLDQVCDHVLKTFDVSI 89 [219][TOP] >UniRef100_C6HHU3 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HHU3_AJECH Length = 137 Score = 57.0 bits (136), Expect = 1e-06 Identities = 29/79 (36%), Positives = 42/79 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108 Query: 433 ALEDLANEYHIMLEEFDQA 489 L+DL N + E F +A Sbjct: 109 GLDDLMNLCDTVTETFIEA 127 [220][TOP] >UniRef100_Q9Y2S0 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Homo sapiens RepID=RPAC2_HUMAN Length = 133 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Frame = +1 Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369 + EGERK + A + TF EDHT+GN LR + + F GY HP E Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77 Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 + +++QT GT + L +L N +L++F+ ++ Sbjct: 78 SKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASI 118 [221][TOP] >UniRef100_C5YTE8 Putative uncharacterized protein Sb08g005640 n=1 Tax=Sorghum bicolor RepID=C5YTE8_SORBI Length = 108 Score = 56.6 bits (135), Expect = 1e-06 Identities = 27/65 (41%), Positives = 39/65 (60%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + TF+ EDHT+ N +R L+ D F GY IPHP E + ++VQT G + +D + Sbjct: 11 SSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTGDPA-KDVLKD 69 Query: 433 ALEDL 447 AL+DL Sbjct: 70 ALQDL 74 [222][TOP] >UniRef100_Q2QWI0 Os12g0194700 protein n=2 Tax=Oryza sativa RepID=Q2QWI0_ORYSJ Length = 108 Score = 56.6 bits (135), Expect = 1e-06 Identities = 30/81 (37%), Positives = 45/81 (55%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A TF+ EDHT+ N +R L+ D F GY IPHP + + ++VQT G + +D + Sbjct: 11 ASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTGDPA-KDVLKD 69 Query: 433 ALEDLANEYHIMLEEFDQAVS 495 +L+DL + FD AV+ Sbjct: 70 SLQDLMVMCQHVRGTFDTAVT 90 [223][TOP] >UniRef100_Q1RMG8 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Bos taurus RepID=RPAC2_BOVIN Length = 133 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Frame = +1 Query: 187 VQFVLPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIP 357 V+ + EGERK + A + TF EDHT+GN LR + + F GY Sbjct: 14 VKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTT 73 Query: 358 HPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 HP E + +++QT G + L DL N +L++F+ ++ Sbjct: 74 HPSESKINLRIQTRGALPAVEPFQRGLTDLMNVCQHVLDKFEASI 118 [224][TOP] >UniRef100_A7NYN7 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7NYN7_VITVI Length = 105 Score = 56.2 bits (134), Expect = 2e-06 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF+ EDHT+ N +R L+ D F GY IPHP + + ++VQT G S + + A Sbjct: 13 TFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG-DSAREVLKDAC 71 Query: 439 EDLANEYHIMLEEFDQAV 492 +DL + FD+AV Sbjct: 72 QDLMLMCQHVRSTFDKAV 89 [225][TOP] >UniRef100_Q2H911 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H911_CHAGB Length = 155 Score = 56.2 bits (134), Expect = 2e-06 Identities = 28/76 (36%), Positives = 41/76 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F +E HT+GN LR + + F Y IPHP EP M V++QT + +A+ Sbjct: 70 AASFEFLNEGHTLGNALRYIIMKNPDVEFCAYAIPHPSEPKMNVRIQTFDGTTAVEALEK 129 Query: 433 ALEDLANEYHIMLEEF 480 L DL ++ +EF Sbjct: 130 GLRDLQELCDVVTDEF 145 [226][TOP] >UniRef100_C9SPR1 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SPR1_9PEZI Length = 146 Score = 56.2 bits (134), Expect = 2e-06 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 E E +++ + A +F F++E HT+GN LR + + F Y IPHP E +M + Sbjct: 42 EEEEELEQRLPGSTDTAASFEFKAEGHTLGNALRYIIMKNPDVEFCAYSIPHPSEDLMNI 101 Query: 385 KVQT-NGTKSCEDAMMHALEDLANEYHIMLEEF 480 ++QT +GT A+ L+DL +M +EF Sbjct: 102 RIQTYDGT--AVSALSKGLKDLQGLCDVMTDEF 132 [227][TOP] >UniRef100_A1DLU8 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DLU8_NEOFI Length = 142 Score = 56.2 bits (134), Expect = 2e-06 Identities = 28/82 (34%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT + + +A+ Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYDSTTAVEALEK 109 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 LE L + ++ ++F A A Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131 [228][TOP] >UniRef100_C6LR48 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LR48_GIALA Length = 95 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/82 (31%), Positives = 47/82 (57%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF +EDHT+GN +R L+ + FAGY +PHP EP + +++Q++ +S D ++ A Sbjct: 7 TFVIVNEDHTLGNCIRYCLNCNPDVSFAGYSVPHPAEPKLNLRIQSD-IRSATDCLLQAA 65 Query: 439 EDLANEYHIMLEEFDQAVSAAS 504 + + N ++ + + AS Sbjct: 66 DLMYNIASVLRQRLAEVYEDAS 87 [229][TOP] >UniRef100_C8V0U1 DNA-directed RNA polymerase I and III 14 kDa polypeptide (AFU_orthologue; AFUA_6G04610) n=2 Tax=Emericella nidulans RepID=C8V0U1_EMENI Length = 137 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/79 (32%), Positives = 43/79 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT + + +A+ Sbjct: 45 AASFQFEGEGHTLGNALRFAIMKNPEVEFCGYTIPHPSESKMNIRIQTYDSTTAVEALEK 104 Query: 433 ALEDLANEYHIMLEEFDQA 489 L+ L + ++ ++F A Sbjct: 105 GLDTLMDLCDVVTDKFTAA 123 [230][TOP] >UniRef100_C5JYX4 Predicted protein n=2 Tax=Ajellomyces dermatitidis RepID=C5JYX4_AJEDS Length = 142 Score = 55.8 bits (133), Expect = 2e-06 Identities = 28/82 (34%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + + Sbjct: 54 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTNVFEVLEK 113 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 +DL + + E F +A +A Sbjct: 114 GFDDLMDLCDTVTETFMEAKNA 135 [231][TOP] >UniRef100_C4Y1Z9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y1Z9_CLAL4 Length = 154 Score = 55.8 bits (133), Expect = 2e-06 Identities = 28/84 (33%), Positives = 45/84 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F EDHT+GN LR + + F GY IPHP E + +++QT G + +A+ Sbjct: 65 AASFQVLDEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITALEALHQ 124 Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504 L++L+ + E F + V A + Sbjct: 125 GLDNLSELCTHVEETFTEKVDAGN 148 [232][TOP] >UniRef100_B8NDQ0 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NDQ0_ASPFN Length = 142 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/76 (34%), Positives = 42/76 (55%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+ Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109 Query: 433 ALEDLANEYHIMLEEF 480 L+ L + ++ ++F Sbjct: 110 GLDSLMDLCDVVTDKF 125 [233][TOP] >UniRef100_A2R4K1 Contig An15c0040, complete genome n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2R4K1_ASPNC Length = 153 Score = 55.8 bits (133), Expect = 2e-06 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+ Sbjct: 61 AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYETTTAVEALEK 120 Query: 433 ALEDLANEYHIMLEEFDQA 489 L+ L + ++ ++F A Sbjct: 121 GLDTLMDLCDVVTDKFTTA 139 [234][TOP] >UniRef100_Q09177 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Schizosaccharomyces pombe RepID=RPAC2_SCHPO Length = 125 Score = 55.8 bits (133), Expect = 2e-06 Identities = 27/76 (35%), Positives = 41/76 (53%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438 TF + EDHT+GN LR + + F GY IPHP E M ++QT + + D + L Sbjct: 36 TFQIQKEDHTLGNSLRYVIMKNPEVEFCGYSIPHPSEAKMNFRIQTAPSTTAVDVLRKGL 95 Query: 439 EDLANEYHIMLEEFDQ 486 +DL + + E+F + Sbjct: 96 DDLIDLCDAVTEKFTE 111 [235][TOP] >UniRef100_C5Y1Q7 Putative uncharacterized protein Sb05g008640 n=1 Tax=Sorghum bicolor RepID=C5Y1Q7_SORBI Length = 107 Score = 55.5 bits (132), Expect = 3e-06 Identities = 33/95 (34%), Positives = 44/95 (46%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 + TF+ EDHT+ N R L+ D F GY IPHP E + ++VQT G DA Sbjct: 11 SSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG-----DAAKD 65 Query: 433 ALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537 L+D IM + + A + A TAE Sbjct: 66 VLKDALQNLMIMCQHVRGTLDNAVANHRAKNTTAE 100 [236][TOP] >UniRef100_B7FZW0 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FZW0_PHATR Length = 89 Score = 55.5 bits (132), Expect = 3e-06 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Frame = +1 Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT--------NGTKSC 414 TF EDHT+GN +R L + S FAGY +PHP EPV+ ++VQT + Sbjct: 4 TFCIGDEDHTLGNAVRHVLIRNNSIGFAGYSVPHPSEPVVQIRVQTVAPAGSRGQQPPTA 63 Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492 A+ A + L ++ I+LE ++ + Sbjct: 64 TGALKTACQTLYDQCDIVLERLEELI 89 [237][TOP] >UniRef100_A4I3T4 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania infantum RepID=A4I3T4_LEIIN Length = 137 Score = 55.5 bits (132), Expect = 3e-06 Identities = 37/100 (37%), Positives = 48/100 (48%) Frame = +1 Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417 T + TF EDHT+GN LR L + + AGY IPHPLEP M++ VQ + Sbjct: 42 TDNESTAVVTFSHEDHTLGNPLRHVLMQNAAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99 Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537 +A+ LE LA + FD + H AAA E Sbjct: 100 EAVAKGLERLAEICDDTISSFDNCM--VEQHRMAAATQPE 137 [238][TOP] >UniRef100_A0DTF6 Chromosome undetermined scaffold_63, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DTF6_PARTE Length = 122 Score = 55.5 bits (132), Expect = 3e-06 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%) Frame = +1 Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT-NGTKSCEDAMMH 432 GTF F EDHT+GN LR L + F GY +PHP E M +++QT N TK E M Sbjct: 42 GTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVNETK--EKVMND 99 Query: 433 ALEDLANEYHIMLEEFDQAV 492 L+ L+ I+ ++F QA+ Sbjct: 100 GLKCLSQICDIIEDKFKQAL 119 [239][TOP] >UniRef100_C5P253 DNA-directed RNA polymerases I and III 16 kDa polypeptide, putative n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5P253_COCP7 Length = 145 Score = 55.5 bits (132), Expect = 3e-06 Identities = 27/79 (34%), Positives = 42/79 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT + + + + Sbjct: 57 AASFQFEGEDHTLGNALRYIIMKNPDVEFCGYTMPHPSETKMNLRIQTYASTNVFEVLDK 116 Query: 433 ALEDLANEYHIMLEEFDQA 489 L DL + ++ E F A Sbjct: 117 GLSDLIDLCDVVTETFTTA 135 [240][TOP] >UniRef100_B8P7Q9 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8P7Q9_POSPM Length = 89 Score = 55.5 bits (132), Expect = 3e-06 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Frame = +1 Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHA-DKSTVFAGYRIPHPLEPVMVVKVQTNGT 405 DTK+ +A T +DHT+GNL+R D + Y++PHPL+P ++K+QT+GT Sbjct: 4 DTKIPNAATIKVLKQDHTLGNLIRAYTTVVDAANFVCRYKVPHPLQPHFLIKIQTDGT 61 [241][TOP] >UniRef100_B6QVD5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QVD5_PENMQ Length = 135 Score = 55.5 bits (132), Expect = 3e-06 Identities = 28/82 (34%), Positives = 44/82 (53%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F+ E HT+GN LR + + F GY IPHP E M +++QT + +A+ Sbjct: 43 AASFQFKEEGHTLGNALRYVIMKNPKVEFCGYTIPHPSEAKMNLRIQTYDDTTAIEALEK 102 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L DL + ++ ++F A A Sbjct: 103 GLNDLMDLCDVVSDKFTVARDA 124 [242][TOP] >UniRef100_UPI00006D2CA2 PREDICTED: polymerase (RNA) I polypeptide D, 16kDa n=1 Tax=Macaca mulatta RepID=UPI00006D2CA2 Length = 133 Score = 55.1 bits (131), Expect = 4e-06 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Frame = +1 Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369 + EGERK + A + TF EDHT+GN LR + + F GY HP E Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77 Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 + +++QT GT + L +L + +L++F+ ++ Sbjct: 78 SKINLRIQTRGTLPAVEPFQRGLNELMSVCQHVLDKFEASI 118 [243][TOP] >UniRef100_UPI00004BE302 UPI00004BE302 related cluster n=1 Tax=Canis lupus familiaris RepID=UPI00004BE302 Length = 133 Score = 55.1 bits (131), Expect = 4e-06 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +1 Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369 + EGERK + A + TF EDHT+GN LR + + F GY HP E Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77 Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 + +++QT G + L +L N +L++F+ ++ Sbjct: 78 SKINLRIQTRGALPAVEPFQRGLNELMNVCQHVLDKFEASI 118 [244][TOP] >UniRef100_Q4DBQ7 DNA-directed RNA polymerase I/III subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DBQ7_TRYCR Length = 134 Score = 55.1 bits (131), Expect = 4e-06 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Frame = +1 Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 E+KV+ + T + T F EDHT+GN LR L ++ AGY IPHPLE M++ Sbjct: 30 EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89 Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 VQ+ T +A+ LE LA+ L+ F+ + Sbjct: 90 HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123 [245][TOP] >UniRef100_Q4D7H8 DNA-dependent RNA polymerases, putative n=1 Tax=Trypanosoma cruzi RepID=Q4D7H8_TRYCR Length = 134 Score = 55.1 bits (131), Expect = 4e-06 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Frame = +1 Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384 E+KV+ + T + T F EDHT+GN LR L ++ AGY IPHPLE M++ Sbjct: 30 EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89 Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492 VQ+ T +A+ LE LA+ L+ F+ + Sbjct: 90 HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123 [246][TOP] >UniRef100_A8QGH1 Probable DNA-directed RNA polymerases I/III 16 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8QGH1_BRUMA Length = 113 Score = 55.1 bits (131), Expect = 4e-06 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Frame = +1 Query: 199 LPEGERKVKY-KADTKLKDAGTFT--FRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369 L + ERKV+ D+ D T EDHTIGN L+ L + F GY +PHPLE Sbjct: 4 LLDSERKVEILDVDSFRSDPSNLTVILYEEDHTIGNSLKHVLCKMRDVEFCGYNVPHPLE 63 Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489 +++++QT S +M E+L + + ++FD + Sbjct: 64 DKILIRLQTKRGVSAASMLMKGFEELECIFASIRQKFDSS 103 [247][TOP] >UniRef100_C5FRW4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1 Tax=Microsporum canis CBS 113480 RepID=C5FRW4_NANOT Length = 144 Score = 55.1 bits (131), Expect = 4e-06 Identities = 26/79 (32%), Positives = 43/79 (54%) Frame = +1 Query: 244 LKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDA 423 ++ A +F F EDHT+GN LR + + F GY +PHP E M +++QT + + Sbjct: 52 VETAASFQFEGEDHTLGNALRYVIMKNPDVEFCGYTMPHPSEAKMNLRIQTYDSTNVFTV 111 Query: 424 MMHALEDLANEYHIMLEEF 480 + L DL + ++ E+F Sbjct: 112 LEKGLSDLMDLCDVVTEKF 130 [248][TOP] >UniRef100_C4R752 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R752_PICPG Length = 136 Score = 55.1 bits (131), Expect = 4e-06 Identities = 26/82 (31%), Positives = 45/82 (54%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F EDHT+GN LR + + + GY IPHP E + +++QT G + +A+ Sbjct: 47 AASFQILDEDHTLGNSLRYIIIKNPEVEYCGYSIPHPSEAKLNIRIQTYGGMTAVEALRK 106 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 L+DL + + ++F ++A Sbjct: 107 GLDDLVDICDHVEKKFSDVIAA 128 [249][TOP] >UniRef100_C4JP01 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JP01_UNCRE Length = 145 Score = 55.1 bits (131), Expect = 4e-06 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT + + + Sbjct: 57 AASFQFEKEDHTLGNALRYVIMKNPGVEFCGYTMPHPSEERMNLRIQTYSPANVFEVLDK 116 Query: 433 ALEDLANEYHIMLEEFDQA 489 DL + ++LE F A Sbjct: 117 GFSDLMDLCDVVLETFTAA 135 [250][TOP] >UniRef100_C0SH10 Predicted protein n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SH10_PARBP Length = 201 Score = 55.1 bits (131), Expect = 4e-06 Identities = 28/82 (34%), Positives = 43/82 (52%) Frame = +1 Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432 A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + Sbjct: 113 AVSFQFDREDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTTAIAVLEK 172 Query: 433 ALEDLANEYHIMLEEFDQAVSA 498 +DL ++ E F +A +A Sbjct: 173 GFDDLMELCDVVTETFTEAKNA 194