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[1][TOP]
>UniRef100_A8HRP7 DNA-directed RNA polymerase II, 13.6 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8HRP7_CHLRE
Length = 115
Score = 236 bits (601), Expect = 1e-60
Identities = 115/115 (100%), Positives = 115/115 (100%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG
Sbjct: 1 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH
Sbjct: 61 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 115
[2][TOP]
>UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RYQ0_PHYPA
Length = 137
Score = 116 bits (290), Expect = 1e-24
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ D K+ +A TFT + EDHTIGN+LRMQLH D S +FAG
Sbjct: 1 MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTLQREDHTIGNILRMQLHRDPSVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ +VVK+QTN S A A+ DL E + F+
Sbjct: 61 YKLPHPLQYRVVVKIQTNSQSSPMQAYNLAITDLTKELDHLKATFE 106
[3][TOP]
>UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1
Tax=Ricinus communis RepID=B9RVP3_RICCO
Length = 156
Score = 114 bits (286), Expect = 4e-24
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D++ +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525
YR+PHPL+ ++V++ T S A A+ DL E + F++ + +
Sbjct: 61 YRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEECLRPKGTK-KGSW 119
Query: 526 VTAEWR 543
T+ WR
Sbjct: 120 YTSSWR 125
[4][TOP]
>UniRef100_Q6ZA50 Os07g0172500 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6ZA50_ORYSJ
Length = 120
Score = 114 bits (284), Expect = 7e-24
Identities = 52/106 (49%), Positives = 73/106 (68%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +AG+FT EDHTIGN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V+V T + A A+ DL E + + F+
Sbjct: 61 YKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFE 106
[5][TOP]
>UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays
RepID=B4FJS1_MAIZE
Length = 120
Score = 114 bits (284), Expect = 7e-24
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+GN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V++ T S A A+ DL E + + F+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFE 106
[6][TOP]
>UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFS8_PHYPA
Length = 117
Score = 113 bits (283), Expect = 1e-23
Identities = 55/110 (50%), Positives = 72/110 (65%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ D K+ +A TFT EDHT+GN++RMQLH D S +FAG
Sbjct: 1 MNAPDRYERFVVPEGMKKVAYERDMKVMNAATFTVEREDHTVGNVIRMQLHRDPSVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
YR+PHPL+ +VVK+QT S A A+ DL E + F+ S
Sbjct: 61 YRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVFEHETS 110
[7][TOP]
>UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum
bicolor RepID=C5YC44_SORBI
Length = 117
Score = 113 bits (282), Expect = 1e-23
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN++RMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V++ T S A A+ DL E + + F+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFE 106
[8][TOP]
>UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum
bicolor RepID=C5X6I3_SORBI
Length = 120
Score = 112 bits (281), Expect = 2e-23
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+GN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V++ T S A A+ DL E + + F+
Sbjct: 61 YKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAFE 106
[9][TOP]
>UniRef100_A7P675 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P675_VITVI
Length = 116
Score = 112 bits (280), Expect = 2e-23
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D++ +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ +++++ T S A A+ DL E + F+
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 106
[10][TOP]
>UniRef100_A4S056 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S056_OSTLU
Length = 115
Score = 112 bits (279), Expect = 3e-23
Identities = 54/111 (48%), Positives = 76/111 (68%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP R +FVLPEGERK+ Y+ DTK+++AGTF + EDHTIGNLLRM+LH + VFAG
Sbjct: 1 MNQPSRADRFVLPEGERKLSYERDTKVENAGTFVLQREDHTIGNLLRMELHKNPDVVFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
Y+ PHP + +V+KV TN + A+ A+ +L E + ++F ++A
Sbjct: 61 YKNPHPTDHRIVLKVHTNANTTPVQALRDAVTNLRAEVGDLSQQFADEINA 111
[11][TOP]
>UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis
thaliana RepID=RPB11_ARATH
Length = 116
Score = 111 bits (277), Expect = 5e-23
Identities = 51/113 (45%), Positives = 75/113 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+RY +FV+PEG +KV Y DTK+ +A +FT EDHTIGN++RMQLH D++ +FAG
Sbjct: 1 MNAPERYERFVVPEGTKKVSYDRDTKIINAASFTVEREDHTIGNIVRMQLHRDENVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
Y++PHPL+ ++V++ T S A A+ DL E + +F+ V+ S
Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFS 113
[12][TOP]
>UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR
Length = 116
Score = 110 bits (276), Expect = 6e-23
Identities = 51/106 (48%), Positives = 71/106 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V++ T S A A+ DL E + F+
Sbjct: 61 YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106
[13][TOP]
>UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FGH5_MEDTR
Length = 116
Score = 110 bits (274), Expect = 1e-22
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHTIGN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ +++++ T S A ++ DL E + F+
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 106
[14][TOP]
>UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SW39_SOYBN
Length = 116
Score = 108 bits (270), Expect = 3e-22
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT E+HTIGN+LRMQLH D + +FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ ++V++ T S A ++ DL E + F+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFE 106
[15][TOP]
>UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NN58_PICSI
Length = 120
Score = 108 bits (270), Expect = 3e-22
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +FV+PEG +KV Y+ D K+ +A TF EDHTIGN++RMQLH D + +FAG
Sbjct: 1 MNAPDRYEKFVVPEGTKKVSYERDMKIMNAATFVIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPL+ +++++QT S A A++DL E + F+
Sbjct: 61 YKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFE 106
[16][TOP]
>UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
RepID=C1EAB7_9CHLO
Length = 101
Score = 105 bits (261), Expect = 3e-21
Identities = 48/97 (49%), Positives = 68/97 (70%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP R +FVLP+G RK+ + DTK+ +AGT+ + EDHT+GN++RMQLH D + VFAG
Sbjct: 1 MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTYVVQKEDHTLGNIVRMQLHRDPNVVFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANE 456
Y++PHP + +V+KV TN S AM ++ L+ E
Sbjct: 61 YQVPHPSDNRIVIKVHTNKNSSPMQAMTESVNCLSEE 97
[17][TOP]
>UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium
discoideum RepID=RPB11_DICDI
Length = 120
Score = 104 bits (260), Expect = 4e-21
Identities = 50/109 (45%), Positives = 72/109 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ FVLP+G +KV DTK+ +A FT EDHTIGNL+RMQL AD+ +FAG
Sbjct: 1 MNAPDRFELFVLPDGAKKVTMVRDTKIPNASMFTILKEDHTIGNLIRMQLIADQDIIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
YR+PHPLE + +++QTN + + + ++E L+ E+ + F + V
Sbjct: 61 YRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSFIEQV 109
[18][TOP]
>UniRef100_A5BQX0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BQX0_VITVI
Length = 129
Score = 103 bits (256), Expect = 1e-20
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 13/119 (10%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERK-------------VKYKADTKLKDAGTFTFRSEDHTIGNLLR 306
MN PDRY +FV+PEG +K V Y+ DTK+ +A +FT EDHTIGN+LR
Sbjct: 1 MNAPDRYERFVVPEGTKKYIVFSLLSQKLSLVSYERDTKIINAASFTVEREDHTIGNILR 60
Query: 307 MQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
MQLH D++ +FAGY++PHPL+ +++++ T S A A+ DL E + F+
Sbjct: 61 MQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 119
[19][TOP]
>UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J
(DNA-directed RNA polymerase II 13.3 kDa polypeptide)
(RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD
Length = 117
Score = 102 bits (255), Expect = 2e-20
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT + +A MHA+ DL E + E F +A+
Sbjct: 61 YKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEERFKEAI 109
[20][TOP]
>UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes
aegypti RepID=Q16IF1_AEDAE
Length = 117
Score = 102 bits (253), Expect = 3e-20
Identities = 47/108 (43%), Positives = 71/108 (65%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
Y++PHPLE V+++QT S ++A M+A+ DL +E + E F +A
Sbjct: 61 YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFKEA 108
[21][TOP]
>UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS
Length = 117
Score = 102 bits (253), Expect = 3e-20
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT S ++A M+A+ DL E + E F A+
Sbjct: 61 YKVPHPLEHKFVIRIQTTAEYSPQEAFMNAITDLLAELSLFEERFKDAI 109
[22][TOP]
>UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila
RepID=RPB11_DROME
Length = 117
Score = 102 bits (253), Expect = 3e-20
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT S ++A M+A+ DL E + E F A+
Sbjct: 61 YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAI 109
[23][TOP]
>UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
polypeptide n=1 Tax=Tribolium castaneum
RepID=UPI0000D5702A
Length = 117
Score = 101 bits (252), Expect = 4e-20
Identities = 45/109 (41%), Positives = 73/109 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYDGEKKIIREQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT S ++A+M+++ DL +E + E F +A+
Sbjct: 61 YKVPHPLEHKFVLRIQTTSDYSPQEALMNSITDLISELSLFEERFKEAI 109
[24][TOP]
>UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex
quinquefasciatus RepID=B0WDB4_CULQU
Length = 117
Score = 101 bits (252), Expect = 4e-20
Identities = 47/108 (43%), Positives = 71/108 (65%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
Y++PHPLE V+++QT S ++A M+A+ DL +E + E F +A
Sbjct: 61 YKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERFREA 108
[25][TOP]
>UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma
floridae RepID=UPI0001868C2E
Length = 116
Score = 100 bits (250), Expect = 6e-20
Identities = 49/109 (44%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GNLLR QL D +FAG
Sbjct: 1 MNAPPTFESFLLFEGEKKITITKDTKVPNAALFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT S ++A +A+ DL +E ++ E F AV
Sbjct: 61 YKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 109
[26][TOP]
>UniRef100_C8V407 DNA-directed RNA polymerase II subunit RPB11a, putative
(AFU_orthologue; AFUA_7G03860) n=2 Tax=Emericella
nidulans RepID=C8V407_EMENI
Length = 129
Score = 100 bits (250), Expect = 6e-20
Identities = 47/114 (41%), Positives = 69/114 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA
Sbjct: 1 MNAPDRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL P +++VQT+G S + A++ A +L + I+ EF + M
Sbjct: 61 YKVPHPLVPKFILRVQTDGDISPKQAVITACNELVRDLGILSREFTKEYELRKM 114
[27][TOP]
>UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186CAF7
Length = 117
Score = 100 bits (249), Expect = 8e-20
Identities = 45/109 (41%), Positives = 72/109 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLFDGEKKIVKELDQKVPNAAIFTINKEDHTLGNMIRDQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT + +DA+M+A+ DL +E + E F +A+
Sbjct: 61 YKVPHPLEHKFVLRIQTTSDYTPQDALMNAITDLLSELSLFEERFKEAI 109
[28][TOP]
>UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide J n=1 Tax=Ciona intestinalis
RepID=UPI000180BEE7
Length = 117
Score = 100 bits (249), Expect = 8e-20
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ DTK+ +A FT EDHT+GN+LR QL D +FAG
Sbjct: 1 MNAPPAFETFLLFDGEKKISITKDTKVPNAAHFTVNKEDHTLGNILRTQLLKDPKVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +++VQT G S ++A +A+ DL +E ++ E F V
Sbjct: 61 YKVPHPLEHKFILRVQTTGDYSPQEAFTNAITDLISEISLLEERFKATV 109
[29][TOP]
>UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG
Length = 117
Score = 100 bits (249), Expect = 8e-20
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLMKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[30][TOP]
>UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
polypeptide n=1 Tax=Nasonia vitripennis
RepID=UPI00015B4993
Length = 117
Score = 100 bits (248), Expect = 1e-19
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT + +A M+A+ DL E + E F +A+
Sbjct: 61 YKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVTDLIAELSLFEERFKEAI 109
[31][TOP]
>UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes
RepID=UPI0000019E7A
Length = 117
Score = 100 bits (248), Expect = 1e-19
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[32][TOP]
>UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri
RepID=Q69G41_BRABE
Length = 135
Score = 100 bits (248), Expect = 1e-19
Identities = 48/105 (45%), Positives = 67/105 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GNLLR QL D +FAG
Sbjct: 1 MNAPPTFESFLLFEGEKKITITKDTKVPNAAIFTVNKEDHTLGNLLRAQLLKDPQVIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE V++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEVSLLEERF 105
[33][TOP]
>UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
Tax=Triatoma infestans RepID=A6YPS3_TRIIF
Length = 117
Score = 100 bits (248), Expect = 1e-19
Identities = 44/109 (40%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE KV + DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPTFDSFLLYDGEHKVIREMDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPKVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPL+P V+++QT ++ + + +A+ DL +E + E F +A+
Sbjct: 61 YKVPHPLDPKFVIRIQTTNDETPQSVLKNAITDLISELSLFEERFKEAI 109
[34][TOP]
>UniRef100_A2R179 Contig An13c0010, complete genome n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2R179_ASPNC
Length = 129
Score = 100 bits (248), Expect = 1e-19
Identities = 50/128 (39%), Positives = 74/128 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA
Sbjct: 1 MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAA 525
Y++PHPL P ++VQT+G + +DA++ A +L + I+ EF + M
Sbjct: 61 YKVPHPLVPNFQLRVQTDGDITPKDAVIAACHELVRDLGILSREFTKEYELRKM----VG 116
Query: 526 VTAEWRGG 549
TA+ + G
Sbjct: 117 ATAQQQNG 124
[35][TOP]
>UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis
RepID=B7PS85_IXOSC
Length = 117
Score = 99.8 bits (247), Expect = 1e-19
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITIEKDTKVPNAAIFTVNKEDHTLGNMIRAQLLKDPCVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +++VQT + ++A +A+ DL +E ++ E F ++V
Sbjct: 61 YKVPHPLEHKFILRVQTTPDSTPQEAFTNAITDLISELSLLEERFKESV 109
[36][TOP]
>UniRef100_A1DC50 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1DC50_NEOFI
Length = 167
Score = 99.8 bits (247), Expect = 1e-19
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
+QP + FVL GE KV+ +ADT++ + FTF EDHT+GNLLR +L + +FAGY
Sbjct: 40 DQPRSFESFVLSPGEEKVEVEADTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGY 99
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
++PHPL P ++VQT+G + +DA++ A DL + I+ EF + M
Sbjct: 100 KVPHPLVPKFELRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 152
[37][TOP]
>UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE
Length = 117
Score = 99.4 bits (246), Expect = 2e-19
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[38][TOP]
>UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
RepID=C1BJJ1_OSMMO
Length = 117
Score = 99.4 bits (246), Expect = 2e-19
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[39][TOP]
>UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus
familiaris RepID=UPI00005A0EE3
Length = 1108
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/125 (39%), Positives = 75/125 (60%)
Frame = +1
Query: 118 CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297
CGF G + MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN
Sbjct: 982 CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 1035
Query: 298 LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
+++ QL D +FAGY++PHPLE ++++VQT S ++A +A+ DL +E ++ E
Sbjct: 1036 IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 1095
Query: 478 FDQAV 492
F A+
Sbjct: 1096 FRVAI 1100
[40][TOP]
>UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA
Length = 117
Score = 99.0 bits (245), Expect = 2e-19
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHTIGN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[41][TOP]
>UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei
RepID=B5XEX2_SALSA
Length = 117
Score = 99.0 bits (245), Expect = 2e-19
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[42][TOP]
>UniRef100_B4I598 GM17133 n=1 Tax=Drosophila sechellia RepID=B4I598_DROSE
Length = 105
Score = 99.0 bits (245), Expect = 2e-19
Identities = 45/103 (43%), Positives = 68/103 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDHNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLE 474
Y++PHPLE V+++QT S ++A M+A+ DL E+ + E
Sbjct: 61 YKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAEFSLFEE 103
[43][TOP]
>UniRef100_Q4WG57 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Aspergillus fumigatus RepID=Q4WG57_ASPFU
Length = 167
Score = 99.0 bits (245), Expect = 2e-19
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = +1
Query: 55 PTLIDNHCAKIQVARCFHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKA 234
P ++ N A AR H T G + S+ +QP + FVL GE KV+ +
Sbjct: 6 PFMLPNEMA---YARWIHATG-GSRNHNAFHSSINLDNDQPRSFESFVLSPGEEKVEIET 61
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
DT++ + FTF EDHT+GNLLR +L + +FAGY++PHPL P ++VQT+G +
Sbjct: 62 DTRIPSSSIFTFNKEDHTLGNLLRSRLLQNSHVIFAGYKVPHPLVPKFELRVQTDGEITP 121
Query: 415 EDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
+DA++ A DL + I+ EF + M
Sbjct: 122 KDALLAACHDLVKDLGILSREFTKEYELRKM 152
[44][TOP]
>UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001923CF4
Length = 117
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+ + F+L +GE+K+ DTK+ +A FT EDHT+GNL+R QL D +FAG
Sbjct: 1 MNAPESFEPFLLLDGEKKINIVKDTKVPNAAHFTVMKEDHTLGNLIRSQLLKDPQVIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
YR+PHPLE V++QT S ++A A+ DL +E ++ E F A+
Sbjct: 61 YRVPHPLEHKFNVRIQTTPDYSPQEAFTSAITDLLSEISLLEERFKSAL 109
[45][TOP]
>UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J
(DNA-directed RNA polymerase II 13.3 kDa polypeptide)
(RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED
Length = 191
Score = 98.6 bits (244), Expect = 3e-19
Identities = 45/110 (40%), Positives = 71/110 (64%)
Frame = +1
Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
+MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FA
Sbjct: 74 SMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 133
Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 134 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 183
[46][TOP]
>UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1
Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR
Length = 117
Score = 98.6 bits (244), Expect = 3e-19
Identities = 46/109 (42%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHTIGN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[47][TOP]
>UniRef100_A7SGE2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SGE2_NEMVE
Length = 117
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+ + F+L +G++K+ DTK+ +A F EDHT+GNLLR QL D +FAG
Sbjct: 1 MNAPEPFEPFLLLDGDKKITITKDTKVPNAAHFVVNKEDHTLGNLLREQLLKDPQVIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++ HPLE V++VQT S ++A HA+ DL +E ++ E F AV
Sbjct: 61 YKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERFKAAV 109
[48][TOP]
>UniRef100_Q1DQC2 DNA-directed RNA polymerase II n=1 Tax=Coccidioides immitis
RepID=Q1DQC2_COCIM
Length = 128
Score = 98.6 bits (244), Expect = 3e-19
Identities = 46/114 (40%), Positives = 69/114 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ FVL GE+KV+ + DT++ FTF EDHT+GNL+R QL + FAG
Sbjct: 1 MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRAQLLKSQHVQFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL +++VQT+G + +DA++ A +L + + EF + M
Sbjct: 61 YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114
[49][TOP]
>UniRef100_C5PBJ9 RNA polymerase Rpb3/Rpb11 dimerization domain containing protein
n=1 Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5PBJ9_COCP7
Length = 128
Score = 98.6 bits (244), Expect = 3e-19
Identities = 46/114 (40%), Positives = 69/114 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ FVL GE+KV+ + DT++ FTF EDHT+GNL+R QL + FAG
Sbjct: 1 MNAPDRFESFVLGPGEKKVEMETDTRVPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL +++VQT+G + +DA++ A +L + + EF + M
Sbjct: 61 YKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 114
[50][TOP]
>UniRef100_B8NFM6 DNA-directed RNA polymerase II subunit RPB11a, putative n=2
Tax=Aspergillus RepID=B8NFM6_ASPFN
Length = 129
Score = 98.6 bits (244), Expect = 3e-19
Identities = 46/114 (40%), Positives = 69/114 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY FVL GE KV+ + DT++ + FTF EDHT+GNL+R +L +FA
Sbjct: 1 MNAPDRYESFVLANGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLIRSRLLQSSHVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL P ++VQT+G + ++A++ A +L + I+ EF + M
Sbjct: 61 YKVPHPLVPKFELRVQTDGEITPKEAVIAACHELVRDLGILSREFTKEYELRKM 114
[51][TOP]
>UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus
RepID=RPB11_MOUSE
Length = 117
Score = 98.2 bits (243), Expect = 4e-19
Identities = 45/109 (41%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRGAI 109
[52][TOP]
>UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota
RepID=RPB11_HUMAN
Length = 117
Score = 98.2 bits (243), Expect = 4e-19
Identities = 45/109 (41%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[53][TOP]
>UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles
gambiae RepID=RPB11_ANOGA
Length = 117
Score = 98.2 bits (243), Expect = 4e-19
Identities = 46/109 (42%), Positives = 70/109 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V+++QT S +A M+A+ DL +E + E F +A+
Sbjct: 61 YKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERFREAM 109
[54][TOP]
>UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB32C9
Length = 129
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/121 (39%), Positives = 73/121 (60%)
Frame = +1
Query: 118 CGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGN 297
CGF G + MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN
Sbjct: 4 CGF------GCECGARMNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGN 57
Query: 298 LLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
+++ QL D +FAGY++PHPLE ++++VQT S ++A +A+ DL +E ++ E
Sbjct: 58 IIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEER 117
Query: 478 F 480
F
Sbjct: 118 F 118
[55][TOP]
>UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
RepID=C1BLH2_OSMMO
Length = 117
Score = 97.8 bits (242), Expect = 5e-19
Identities = 46/105 (43%), Positives = 68/105 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLSKEDHTLGNIIRSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE +V++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105
[56][TOP]
>UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS
Length = 124
Score = 97.4 bits (241), Expect = 7e-19
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+R F+L + E K++Y+ DTK+ +AGTFTF EDHT+ NLLRMQL D + FAG
Sbjct: 1 MNAPERSSAFLLDDDEEKIEYQPDTKVSNAGTFTFNKEDHTVANLLRMQLLRDPAVKFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y PHPL + +K+QT ++ + + + A+EDL+NE +L + A+
Sbjct: 61 YMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHLLTQVTDAI 110
[57][TOP]
>UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1
Tax=Monodelphis domestica RepID=UPI00005EC058
Length = 128
Score = 97.1 bits (240), Expect = 9e-19
Identities = 44/105 (41%), Positives = 68/105 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105
[58][TOP]
>UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus
musculus RepID=UPI00001F2CA1
Length = 111
Score = 97.1 bits (240), Expect = 9e-19
Identities = 44/105 (41%), Positives = 68/105 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105
[59][TOP]
>UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S6B1_TRIAD
Length = 116
Score = 97.1 bits (240), Expect = 9e-19
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L E+K+ DTK+ +A FT EDHT+GN++R QL D +FAG
Sbjct: 1 MNAPAPFEHFLLLPDEKKITITKDTKVPNACHFTIAKEDHTLGNIIRAQLLKDPQVIFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +V++VQT S E+A +AL DL +E +++ + F AV
Sbjct: 61 YKVPHPLEYDVVIRVQTTSNYSPEEAFSNALTDLISELNVLDDRFKAAV 109
[60][TOP]
>UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN
Length = 127
Score = 97.1 bits (240), Expect = 9e-19
Identities = 44/105 (41%), Positives = 68/105 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105
[61][TOP]
>UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens
RepID=A6NK79_HUMAN
Length = 116
Score = 97.1 bits (240), Expect = 9e-19
Identities = 44/105 (41%), Positives = 68/105 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105
[62][TOP]
>UniRef100_A1CD73 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Aspergillus clavatus RepID=A1CD73_ASPCL
Length = 165
Score = 97.1 bits (240), Expect = 9e-19
Identities = 46/113 (40%), Positives = 67/113 (59%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
+QP + FVL GE KV+ + DT++ FTF EDHT+GNLLR +L +FAGY
Sbjct: 38 DQPHSFESFVLSPGEEKVEVQTDTRIPSTAIFTFNKEDHTLGNLLRSRLLQSPHVLFAGY 97
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
+IPHPL P +++QT+G + +DA++ A DL + I+ EF + M
Sbjct: 98 KIPHPLVPKFELRIQTDGEVTPKDALLAACHDLVKDLGILSREFTKEFELRKM 150
[63][TOP]
>UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3TYI2_MOUSE
Length = 117
Score = 96.7 bits (239), Expect = 1e-18
Identities = 44/109 (40%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +F G
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFVG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[64][TOP]
>UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB
Length = 117
Score = 96.3 bits (238), Expect = 2e-18
Identities = 45/106 (42%), Positives = 68/106 (64%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN + F+L +GE+K+ + DTK+ +A FT EDHT+GN+LR QL D +FAG
Sbjct: 1 MNAAPTFESFILFDGEKKITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++PHPLE V++VQT S ++A +A+ DL +E ++ E F+
Sbjct: 61 YKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERFN 106
[65][TOP]
>UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus
mykiss RepID=C1BF62_ONCMY
Length = 117
Score = 95.5 bits (236), Expect = 3e-18
Identities = 45/109 (41%), Positives = 68/109 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIKQQLLKDPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE V++VQT S ++A + + DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERFRVAI 109
[66][TOP]
>UniRef100_C1MHV3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MHV3_9CHLO
Length = 152
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP R +FVLP+G RK+ + DTK+ +AGTF + EDHT+GN +RMQLH D VF+G
Sbjct: 1 MNQPSRAEKFVLPDGVRKLTFTRDTKVANAGTFVVQKEDHTLGNAVRMQLHRDPEVVFSG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKS 411
Y++PHP + +V+KV+ +S
Sbjct: 61 YQVPHPSDNRIVIKVRAASAQS 82
[67][TOP]
>UniRef100_B7G3C7 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G3C7_PHATR
Length = 125
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = +1
Query: 166 MNQPDRYVQFVLPE--GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
MN P+R F+L E GERK+ Y DTK+ +AGTF EDHT+ NLLRMQL D F
Sbjct: 1 MNAPERASSFLLDEDSGERKIVYTTDTKVTNAGTFRLNKEDHTVLNLLRMQLLRDPGVRF 60
Query: 340 AGYRIPHPLEPVMVVKVQTNGT-KSCEDAMMHALEDLANEYHIMLEEFDQAV 492
AGY PHPL M +KVQTN + S + + +A+EDL +E +L+E A+
Sbjct: 61 AGYIHPHPLINYMELKVQTNSSHTSPTEVLSNAIEDLGSETDHLLKEVQNAM 112
[68][TOP]
>UniRef100_B6HNK8 Pc21g05130 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HNK8_PENCW
Length = 128
Score = 95.5 bits (236), Expect = 3e-18
Identities = 45/105 (42%), Positives = 64/105 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDRY +L GE K+ + DT+L A FTF EDHT+GN+LR +L +FA
Sbjct: 1 MNAPDRYEAILLAPGENKIDVEVDTRLPSAAIFTFHKEDHTLGNMLRQRLLKTAHVIFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
YR+PHPL P ++VQT+G + A+++A + L + I+ EF
Sbjct: 61 YRVPHPLTPEFQLRVQTDGEITPRQAVINASQALIKDLGILSREF 105
[69][TOP]
>UniRef100_C5G7X6 DNA-directed RNA polymerase II polypeptide n=2 Tax=Ajellomyces
dermatitidis RepID=C5G7X6_AJEDR
Length = 128
Score = 94.7 bits (234), Expect = 5e-18
Identities = 42/114 (36%), Positives = 70/114 (61%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L +F+G
Sbjct: 1 MNAPERFESFVLLPGEKKVEVEVDTRIPSTAIFTFHKEDHTLGNMIRSRLINSSHVLFSG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL P +++VQT+G + ++A++ A +L + + EF + M
Sbjct: 61 YKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLGSLSREFTKEYELRKM 114
[70][TOP]
>UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE
Length = 119
Score = 94.4 bits (233), Expect = 6e-18
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PD + F L +GE K+ Y+ D+K+ +AGTF EDHT+GNLL QL D +FAG
Sbjct: 1 MNAPDPFESFRLEDGEAKITYEPDSKVPNAGTFRMNREDHTVGNLLASQLAKDPRVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
Y++PHPLE ++++V T S ++A+ AL D+
Sbjct: 61 YKVPHPLEHYILLRVHTTAQYSPKEALKQALHDV 94
[71][TOP]
>UniRef100_C1FZC5 DNA-directed RNA polymerase II n=2 Tax=Paracoccidioides
brasiliensis RepID=C1FZC5_PARBD
Length = 128
Score = 94.4 bits (233), Expect = 6e-18
Identities = 42/114 (36%), Positives = 70/114 (61%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L +F+G
Sbjct: 1 MNAPERFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKEDHTLGNMIRSRLLNSSHVLFSG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPL P +++VQT+G + ++A++ A +L + + EF + M
Sbjct: 61 YKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLGALSREFTKEYELRKM 114
[72][TOP]
>UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI
Length = 117
Score = 93.6 bits (231), Expect = 1e-17
Identities = 43/109 (39%), Positives = 69/109 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYDGEKKIVKEVDTKVTNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y+ PHPLE +++QT + +DA+ +++ DL E + E F +A+
Sbjct: 61 YKQPHPLEHKFELRIQTTSDYTPQDALTNSITDLLAELSLFEERFKEAL 109
[73][TOP]
>UniRef100_UPI0000E21436 PREDICTED: similar to MGC13098 protein n=1 Tax=Pan troglodytes
RepID=UPI0000E21436
Length = 398
Score = 93.2 bits (230), Expect = 1e-17
Identities = 42/106 (39%), Positives = 68/106 (64%)
Frame = +1
Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
+MN P + F+L EGE+K+ D K+ +A FT EDHT+GN+++ QL D +FA
Sbjct: 239 SMNAPPAFESFLLFEGEKKISINKDFKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 298
Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
GY++PHPLE ++++ QT S ++A+ +A+ DL +E ++ E F
Sbjct: 299 GYKVPHPLERKIIIEXQTTPDYSPQEALPNAIADLISELSLLEERF 344
[74][TOP]
>UniRef100_B6Q8P4 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6Q8P4_PENMQ
Length = 128
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/114 (39%), Positives = 67/114 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR F+L EGE+K++ KADT+ FT EDH++GNLLR +L ++ FA
Sbjct: 1 MNAPDRTESFILGEGEKKIEEKADTRTPSTSIFTINKEDHSVGNLLRGRLLQNRHVTFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y+IPHPL + ++VQT+G + +DA++ A D + + EF + M
Sbjct: 61 YKIPHPLVHKLELRVQTDGEITPKDALLAACHDTVRDLGTLSREFTKEFELRKM 114
[75][TOP]
>UniRef100_UPI0000E2C133 conserved hypothetical protein n=1 Tax=Aspergillus terreus NIH2624
RepID=UPI0000E2C133
Length = 1608
Score = 92.8 bits (229), Expect = 2e-17
Identities = 43/104 (41%), Positives = 65/104 (62%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N RY FVL GE KV+ + DT++ + FTF EDHT+GNLL +L +FA Y
Sbjct: 39 NDLPRYESFVLASGENKVEMEIDTRIPSSAIFTFNKEDHTLGNLLSSRLLQSSHVLFAAY 98
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
++PHPL+P +++VQT+G + +DA++ A +L + I+ EF
Sbjct: 99 KVPHPLDPKFLLRVQTDGEITPKDAVIAACHELVRDLGILSREF 142
[76][TOP]
>UniRef100_C1H7F3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
Tax=Paracoccidioides brasiliensis Pb01
RepID=C1H7F3_PARBA
Length = 169
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/149 (31%), Positives = 80/149 (53%)
Frame = +1
Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED
Sbjct: 21 FDSSAASYRQNPCRTKV-RPHLDNVSRFESFVLLPGEKKVEVEVDTRVPSTAIFTFNKED 79
Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L +
Sbjct: 80 HTLGNMIRSRLLNSSHVLFSGYKVPHPLIPKFILRVQTDGQITPKEAVITACHELVKDLG 139
Query: 463 IMLEEFDQAVSAASMH*DAAAVTAEWRGG 549
+ EF + M WRGG
Sbjct: 140 ALSREFTKEYELRKMEPGQG-----WRGG 163
[77][TOP]
>UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens
RepID=UPI0001AE70B6
Length = 180
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/106 (41%), Positives = 68/106 (64%)
Frame = +1
Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
+MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FA
Sbjct: 22 SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80
Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 81 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 126
[78][TOP]
>UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens
RepID=UPI0000163C17
Length = 158
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[79][TOP]
>UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens
RepID=Q8TDE6_HUMAN
Length = 158
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[80][TOP]
>UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens
RepID=Q59FR2_HUMAN
Length = 180
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/106 (41%), Positives = 67/106 (63%)
Frame = +1
Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFA 342
+MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FA
Sbjct: 22 SMNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFA 80
Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
GY++PHPLE ++++VQT S ++A +A+ DL E ++ E F
Sbjct: 81 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLIRELSLLEERF 126
[81][TOP]
>UniRef100_C4K042 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4K042_UNCRE
Length = 125
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = +1
Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360
R+ FVL GE+KV+ + DT+L FTF EDHT+GNL+R QL + FAGY++PH
Sbjct: 3 RFESFVLGPGEKKVEMEPDTRLPSTAIFTFNKEDHTLGNLIRSQLLKSQHVQFAGYKVPH 62
Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
PL +++VQT+GT + +DA++ A +L + + EF + M
Sbjct: 63 PLVHKFMLRVQTDGTITPKDAVLTACHELVKDLGTLSREFTKEFELRKM 111
[82][TOP]
>UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo
sapiens RepID=RPB1C_HUMAN
Length = 115
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[83][TOP]
>UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo
sapiens RepID=RPB1B_HUMAN
Length = 115
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ +A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[84][TOP]
>UniRef100_UPI0001792BF8 PREDICTED: similar to GA19897-PA n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792BF8
Length = 119
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ + DTK+ +A FT EDHT+GN++R QL D + +FAG
Sbjct: 1 MNAPPTFESFLLYDGEKKIVQELDTKVVNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTK-SCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE +++QT+ + + +DA+ ++L DL E + E F A+
Sbjct: 61 YKLPHPLEHKFELRIQTSCPEYTPQDALTNSLTDLLAELSLFEERFKDAL 110
[85][TOP]
>UniRef100_C4Q8A9 DNA-directed rna polymerase II 13.3 kD polypeptide, putative n=1
Tax=Schistosoma mansoni RepID=C4Q8A9_SCHMA
Length = 110
Score = 91.3 bits (225), Expect = 5e-17
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L +GE+K+ ++ DT++ +A FT EDHT+GN++ QL D +FAG
Sbjct: 1 MNAPASFEPFLLADGEKKISFEKDTQVPNAAIFTLNREDHTVGNMITCQLLKDPRVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
Y+ PHPLE +V++V T + D + AL+DL +E + E+F A
Sbjct: 61 YKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQFRMA 108
[86][TOP]
>UniRef100_UPI000155D3C2 PREDICTED: similar to RNA polymerase II n=1 Tax=Ornithorhynchus
anatinus RepID=UPI000155D3C2
Length = 117
Score = 90.9 bits (224), Expect = 7e-17
Identities = 42/109 (38%), Positives = 67/109 (61%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ QL D +
Sbjct: 1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLLQE 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F A+
Sbjct: 61 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAI 109
[87][TOP]
>UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo
sapiens RepID=UPI000020F7F2
Length = 115
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[88][TOP]
>UniRef100_Q8IH32 GM15177p n=1 Tax=Drosophila melanogaster RepID=Q8IH32_DROME
Length = 136
Score = 90.9 bits (224), Expect = 7e-17
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 19/128 (14%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309
MN P + F+L EGE+K+ + DTK+ +A FT EDHT+GN++R
Sbjct: 1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRKYVGQQARLITHE 60
Query: 310 -------QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIM 468
QL D + +FAGY++PHPLE V+++QT S ++A M+A+ DL E +
Sbjct: 61 ICILACSQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLF 120
Query: 469 LEEFDQAV 492
E F A+
Sbjct: 121 EERFKDAI 128
[89][TOP]
>UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens
RepID=A6NFM0_HUMAN
Length = 158
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE K+ DTK+ A FT EDHT+GN+++ QL D +FAG
Sbjct: 1 MNAPPAFESFLLFEGE-KITINKDTKVPKACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 60 YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104
[90][TOP]
>UniRef100_UPI000187D7E2 hypothetical protein MPER_11952 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187D7E2
Length = 151
Score = 90.5 bits (223), Expect = 9e-17
Identities = 41/90 (45%), Positives = 60/90 (66%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP+RY FVL +GER V+ DTK+ +AGT +DHT+ +LR QL + +FAG
Sbjct: 1 MNQPNRYELFVLDDGERPVEVTEDTKIPNAGTIKIVKQDHTLAGMLRAQLLSMPQVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435
Y++PHPL P ++K+QT+G+ + E + A
Sbjct: 61 YKVPHPLHPYFIIKIQTDGSITPEAILEQA 90
[91][TOP]
>UniRef100_C0NWN5 Polymerase II polypeptide J n=2 Tax=Ajellomyces capsulatus
RepID=C0NWN5_AJECG
Length = 168
Score = 90.5 bits (223), Expect = 9e-17
Identities = 43/135 (31%), Positives = 76/135 (56%)
Frame = +1
Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED
Sbjct: 21 FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79
Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L +
Sbjct: 80 HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139
Query: 463 IMLEEFDQAVSAASM 507
+ EF + M
Sbjct: 140 SLSREFTKEYELRKM 154
[92][TOP]
>UniRef100_A6R7X6 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
Tax=Ajellomyces capsulatus NAm1 RepID=A6R7X6_AJECN
Length = 168
Score = 90.5 bits (223), Expect = 9e-17
Identities = 43/135 (31%), Positives = 76/135 (56%)
Frame = +1
Query: 103 FHRTACGFPRSSCAGSA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSED 282
F +A + ++ C R ++ R+ FVL GE+KV+ + DT++ FTF ED
Sbjct: 21 FDSSAASYRQNPCKTKV-RPHLDMVARFESFVLLPGEKKVEVEVDTRIPSTAIFTFNKED 79
Query: 283 HTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYH 462
HT+GN++R +L +F+GY++PHPL P +++VQT+G + ++A++ A +L +
Sbjct: 80 HTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQITPKEAVITACHELVKDLG 139
Query: 463 IMLEEFDQAVSAASM 507
+ EF + M
Sbjct: 140 SLSREFTKEYELRKM 154
[93][TOP]
>UniRef100_A8PVS2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8PVS2_MALGO
Length = 159
Score = 90.1 bits (222), Expect = 1e-16
Identities = 38/93 (40%), Positives = 62/93 (66%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N PDR+ F+L GE++++ + D ++ +A TF F EDHT+GN+LR + A +F GY
Sbjct: 3 NAPDRFTLFLLQPGEQRIEVQEDMRIPNAATFIFNKEDHTLGNMLRHAVLAQPGVLFCGY 62
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
++PHPLEP ++VK+QT+G+ + + + A L
Sbjct: 63 KVPHPLEPRVLVKIQTDGSLTPAEVLQQACTKL 95
[94][TOP]
>UniRef100_UPI000013CAF5 UPI000013CAF5 related cluster n=1 Tax=Homo sapiens
RepID=UPI000013CAF5
Length = 117
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLH-ADKSTVFA 342
+N P + F+L EGE+K+ DTK+ +A FT EDHT+GN+++ Q D +FA
Sbjct: 1 VNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFA 60
Query: 343 GYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
GY++PHPLE ++++VQT S ++A +A+ DL +E ++ E F
Sbjct: 61 GYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 106
[95][TOP]
>UniRef100_Q4PC39 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PC39_USTMA
Length = 145
Score = 89.7 bits (221), Expect = 1e-16
Identities = 40/93 (43%), Positives = 63/93 (67%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N P+R+ F+L E++V+ DTK+ +A TF F EDHT+GN+LR + A+ + +F GY
Sbjct: 3 NAPNRFDLFILGPDEKRVEIVEDTKIPNAATFWFNKEDHTLGNMLRHAVLANPAVLFCGY 62
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
++PHPLEP + VK+QT+G+ + DA+ + L
Sbjct: 63 KVPHPLEPKVFVKIQTDGSLTPTDALKQGSQKL 95
[96][TOP]
>UniRef100_A8NBN7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NBN7_COPC7
Length = 144
Score = 89.7 bits (221), Expect = 1e-16
Identities = 45/110 (40%), Positives = 68/110 (61%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P RY FVL +GE+ V+ D+K+ +A T +DHT+GN+LR QL A +FAG
Sbjct: 1 MNAPARYELFVLEDGEKPVEVIEDSKIPNAATIKVVKQDHTLGNMLRSQLLAMPEVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
Y++PHPL P +VKVQT+G+ + + A+ A L + + ++F + S
Sbjct: 61 YKVPHPLHPYFIVKVQTDGSITPQAAVEAACTKLIATINTVAQKFKREFS 110
[97][TOP]
>UniRef100_B0DBT6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DBT6_LACBS
Length = 150
Score = 89.0 bits (219), Expect = 3e-16
Identities = 42/110 (38%), Positives = 67/110 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P+RY +VL +GE+ V+ DTK+ +A T +DHT+GN+LR QL + +FAG
Sbjct: 1 MNAPNRYELYVLEDGEKPVEITEDTKIPNAATIKIVKQDHTLGNMLRAQLLSMPQILFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
Y++PHPL P ++K+QT+GT + + + A L + +F++ S
Sbjct: 61 YKVPHPLHPYFLIKIQTDGTITPQAILHQACTKLIGTMSSLETKFNREFS 110
[98][TOP]
>UniRef100_A7ELB7 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ELB7_SCLS1
Length = 124
Score = 89.0 bits (219), Expect = 3e-16
Identities = 40/113 (35%), Positives = 67/113 (59%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N P+R+ F+L +GE+K +ADT+ ++ FTF EDHT+ N+LR L D +F+GY
Sbjct: 3 NAPERFELFILGDGEKKCTEEADTRTPNSSIFTFNKEDHTLANMLRAHLLKDPHVIFSGY 62
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
+IPHPL +++QT+G + ++A++ +L +E + EF + M
Sbjct: 63 KIPHPLFSKFELRIQTDGEITPKEALVACCRNLVSELEVFSREFTKEFELRKM 115
[99][TOP]
>UniRef100_A3BH10 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3BH10_ORYSJ
Length = 135
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/90 (45%), Positives = 59/90 (65%)
Frame = +1
Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393
R V Y+ DTK+ +AG+FT EDHTIGN+LRMQLH D + +FAGY++PHPL+ ++V+V
Sbjct: 32 RWVSYERDTKIVNAGSFTIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILVRVH 91
Query: 394 TNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
T + A A+ DL E + + F+
Sbjct: 92 TANQSTPTQAYTQAINDLDKELENLKQAFE 121
[100][TOP]
>UniRef100_A8PTP7 RNA polymerase II., putative n=1 Tax=Brugia malayi
RepID=A8PTP7_BRUMA
Length = 133
Score = 88.2 bits (217), Expect = 4e-16
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRM------------ 309
MN P + F++ +GE+K+ + DTK+ +A FT EDHTIGNLL+
Sbjct: 1 MNAPAPFESFLVFDGEKKIAIEKDTKVPNAAIFTVNKEDHTIGNLLKQFAAKIFHKSYFG 60
Query: 310 ----QLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEE 477
QL D +FAGY+ PHPLE +++VQT + EDA+ A+ DL E + E
Sbjct: 61 TFCSQLLKDPQVLFAGYKCPHPLEHKFILRVQTTSDTTPEDALTSAITDLMAELSLFEER 120
Query: 478 FDQAV 492
F +A+
Sbjct: 121 FREAI 125
[101][TOP]
>UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR
Length = 122
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/117 (36%), Positives = 69/117 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L + ++K+ + DTK+ +A FT EDHT+GN+L++QL D +FAG
Sbjct: 1 MNAPAAFESFLLLD-DKKIYIEKDTKVPNAAIFTINKEDHTLGNMLKIQLLKDPEVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516
Y+ PHPLE ++++VQT + DA+ A+ DL E ++ D A+ + D
Sbjct: 60 YKNPHPLEHKILLRVQTTNATTPADALTTAITDLVGELSLLEHRIDSAIKKCTQSTD 116
[102][TOP]
>UniRef100_C5FYD6 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Microsporum
canis CBS 113480 RepID=C5FYD6_NANOT
Length = 161
Score = 87.4 bits (215), Expect = 7e-16
Identities = 41/109 (37%), Positives = 66/109 (60%)
Frame = +1
Query: 181 RYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPH 360
R+ FVL GE+KV+ + DT++ FTF EDHT+GN++R +L + +FAGY+IPH
Sbjct: 39 RFESFVLGPGEKKVEIEVDTRVPSTAIFTFNKEDHTLGNMIRARLLQSQHVLFAGYKIPH 98
Query: 361 PLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
PL ++++VQT+G + +DA++ A +L + EF + M
Sbjct: 99 PLVHKVLLRVQTDGQITPKDAVLTACHELVKDLGTFSREFTKEYELRKM 147
[103][TOP]
>UniRef100_Q6CUB7 KLLA0C06160p n=1 Tax=Kluyveromyces lactis RepID=Q6CUB7_KLULA
Length = 121
Score = 87.0 bits (214), Expect = 1e-15
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LPEGE K+K + DTK A TF EDHT+GNL+R +L D+ +FA
Sbjct: 1 MNAPDRFELFLLPEGESKLKVEQDTKASSAIIVTFEKEDHTLGNLIRAELLEDEGVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL +++QT +DA+ +A + N+ + F+
Sbjct: 61 YKVEHPLFAKFKMRIQTVEGYDPKDALKNACNSIINKLAQLQSNFE 106
[104][TOP]
>UniRef100_B8LZG9 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8LZG9_TALSN
Length = 156
Score = 87.0 bits (214), Expect = 1e-15
Identities = 44/120 (36%), Positives = 69/120 (57%)
Frame = +1
Query: 148 SA*RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
SA A+N P + F+L EGE+K++ KADT+ FT EDH++GNLLR +L ++
Sbjct: 23 SAPPPAVNVPRKTESFILGEGEKKIEEKADTRTPSTSIFTLNKEDHSVGNLLRGRLLQNR 82
Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
FA Y+IPHPL + ++VQT+G + ++A++ A D + + EF + M
Sbjct: 83 HVTFAAYKIPHPLVHKVELRVQTDGEITPKEALLAACHDTVRDLGTLSREFTKEFELRKM 142
[105][TOP]
>UniRef100_B5X6K5 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Salmo salar
RepID=B5X6K5_SALSA
Length = 128
Score = 86.3 bits (212), Expect = 2e-15
Identities = 40/105 (38%), Positives = 61/105 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L EGE+K++ K + + + F EDHT+GNLL L A + AG
Sbjct: 1 MNAPDRFELFLLSEGEKKIEEKVYSGMSNTSDFVLNKEDHTLGNLLAEHLKAHPNVYMAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++ HP P + +++QT+GTK+ D E L N+ + +EF
Sbjct: 61 YKLGHPNVPQLFIRLQTDGTKTPRDVFTSVCEKLINQLESLHQEF 105
[106][TOP]
>UniRef100_Q6BLX4 DEHA2F09944p n=1 Tax=Debaryomyces hansenii RepID=Q6BLX4_DEBHA
Length = 122
Score = 86.3 bits (212), Expect = 2e-15
Identities = 41/105 (39%), Positives = 61/105 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K+K DTK+ +A EDHT+GNL+R QL D+ +FA
Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDTKVPNAALIKIEREDHTLGNLIRAQLLKDERVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++ HPL V+++QT S +A+ +A L E ++ F
Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALRNACSGLIGELDVIKTRF 105
[107][TOP]
>UniRef100_B9W6P5 DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9W6P5_CANDC
Length = 124
Score = 86.3 bits (212), Expect = 2e-15
Identities = 42/106 (39%), Positives = 63/106 (59%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D+ +FA
Sbjct: 1 MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDERVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL V++VQT S +A+ +A L +E ++ +F+
Sbjct: 61 YKVEHPLFANFVLRVQTEDDYSPREALQNACSSLISELDVIKSKFN 106
[108][TOP]
>UniRef100_Q75CF1 ACL005Cp n=1 Tax=Eremothecium gossypii RepID=Q75CF1_ASHGO
Length = 122
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/106 (37%), Positives = 64/106 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LPEGE K+K + DTK +A TF EDHT+GN++R +L D+ +FA
Sbjct: 1 MNAPDRFELFLLPEGESKLKIEPDTKAANAVIITFEKEDHTLGNIIRAELLEDERVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL +++QT ++A+ +A + N+ + F+
Sbjct: 61 YKVEHPLFARFRMRIQTAEGYDPKEALKNACNSIINKLATLKSNFE 106
[109][TOP]
>UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE
Length = 162
Score = 85.5 bits (210), Expect = 3e-15
Identities = 41/114 (35%), Positives = 67/114 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP+R ++L + E+ + D KL +A T R +DHT+GN+LR QL D + +FAG
Sbjct: 1 MNQPNRIDSWLLQDDEKPLTITEDPKLPNASTIVIRRQDHTLGNMLRAQLMLDPTVLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
Y++PHPLE +++K+QT+ + +A+ A +L + + +F Q M
Sbjct: 61 YKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQFQQQAKNIEM 114
[110][TOP]
>UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Caenorhabditis elegans RepID=RPB11_CAEEL
Length = 122
Score = 85.5 bits (210), Expect = 3e-15
Identities = 42/117 (35%), Positives = 68/117 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L + ++K + DTK+ +A FT EDHT+GN+L++QL D +FAG
Sbjct: 1 MNAPAAFESFLLLD-DKKFYIEKDTKVPNAAIFTIMKEDHTLGNMLKIQLLKDPEVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH*D 516
Y+ PHPLE +++++QT + DA+ A+ DL E ++ D A+ + D
Sbjct: 60 YKNPHPLEHKILLRIQTTNNTTPADALTTAITDLVGELSLLEHRIDAAIKKCTQSGD 116
[111][TOP]
>UniRef100_Q6C7Q3 YALI0D26301p n=1 Tax=Yarrowia lipolytica RepID=Q6C7Q3_YARLI
Length = 117
Score = 85.1 bits (209), Expect = 4e-15
Identities = 40/107 (37%), Positives = 63/107 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K++ DT++ + F EDHT+GNLLR QL D +FA
Sbjct: 1 MNAPDRFELFLLPDGVPKLEVTPDTRIPNCANIKFEKEDHTLGNLLRSQLLHDSRVIFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
Y++ HPL V+++QT S ++A+ +A L + + E+F +
Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPQEALTNACNALIRQLSDLQEKFQR 107
[112][TOP]
>UniRef100_C4YFG3 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Candida
albicans RepID=C4YFG3_CANAL
Length = 124
Score = 84.7 bits (208), Expect = 5e-15
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D +FA
Sbjct: 1 MNAPDRFELFILPDGVDKIKIIPDTKVPNAAIVKIEREDHTLANLLRAQLLKDDRVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL V+++QT S +A+ +A L +E ++ +F+
Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALQNACSGLISELDVIKSKFN 106
[113][TOP]
>UniRef100_A5DVI5 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5DVI5_LODEL
Length = 121
Score = 84.7 bits (208), Expect = 5e-15
Identities = 41/107 (38%), Positives = 62/107 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K+K DTK+ +A EDHT+ NLLR QL D +FA
Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDTKVPNAAIIKIEREDHTLANLLRAQLLKDPRVIFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
Y++ HPL V+++QT + ++A+ +A L NE + +F +
Sbjct: 61 YKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKFSE 107
[114][TOP]
>UniRef100_C6K0C3 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=9
Tax=Pyretophorus RepID=C6K0C3_ANOAR
Length = 85
Score = 84.0 bits (206), Expect = 8e-15
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +1
Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
EGE+K+ + D K+ +A FT EDHT+GN++R QL D + +FAGY++PHPLE V+
Sbjct: 2 EGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVL 61
Query: 385 KVQTNGTKSCEDAMMHALEDLANE 456
++QT S +A M+A+ DL +E
Sbjct: 62 RIQTTSEYSPHEAFMNAITDLLSE 85
[115][TOP]
>UniRef100_C8ZHW0 Rpb11p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZHW0_YEAST
Length = 120
Score = 84.0 bits (206), Expect = 8e-15
Identities = 41/106 (38%), Positives = 61/106 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D+ +FA
Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HP ++VQT +DA+ +A + N+ + F+
Sbjct: 61 YKVEHPFFARFKLRVQTTEGYDPKDALKNACNSIINKLGALKTNFE 106
[116][TOP]
>UniRef100_A7TJW3 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TJW3_VANPO
Length = 120
Score = 84.0 bits (206), Expect = 8e-15
Identities = 40/106 (37%), Positives = 63/106 (59%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PD++ F+L EGE K+ + DTK +A TF EDHT+GNL+R +L D +FA
Sbjct: 1 MNAPDKFELFLLGEGESKLNIEPDTKAPNAVVITFEKEDHTLGNLIRSELLNDSKVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL +++QT +DA+ +A ++ N+ I+ F+
Sbjct: 61 YKVEHPLFARFKLRIQTVENYDPKDALKNACNNIINKLGILKTNFE 106
[117][TOP]
>UniRef100_P38902 DNA-directed RNA polymerase II subunit RPB11 n=4 Tax=Saccharomyces
cerevisiae RepID=RPB11_YEAST
Length = 120
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/106 (37%), Positives = 61/106 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D+ +FA
Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HP +++QT +DA+ +A + N+ + F+
Sbjct: 61 YKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFE 106
[118][TOP]
>UniRef100_A3LX93 RNA polymerase II core subunit n=1 Tax=Pichia stipitis
RepID=A3LX93_PICST
Length = 122
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+G K+K D+K+ +A EDHT+ NLLR QL D +FA
Sbjct: 1 MNAPDRFELFILPDGVDKIKITPDSKVPNAAIIKIEREDHTLANLLRAQLLKDPRVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
Y++ HPL V+++QT S +A+ +A L +E ++ F
Sbjct: 61 YKVEHPLFANFVLRIQTEDDYSPREALKNACSGLISELDVIKNRF 105
[119][TOP]
>UniRef100_C5DEP5 KLTH0C10934p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DEP5_LACTC
Length = 122
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LPEGE K+K DTK +A TF EDHT+ NL+R +L DK +FA
Sbjct: 1 MNAPDRFELFLLPEGEAKLKIDPDTKAPNAVIVTFEKEDHTLANLIRGELLEDKGVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL +++QT +DA+ +A + ++ + F+
Sbjct: 61 YKVEHPLFAQFKLRIQTVEGYDPKDALKNACNGIISKLGQLQSNFE 106
[120][TOP]
>UniRef100_C5DTD1 ZYRO0C07502p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DTD1_ZYGRC
Length = 122
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/106 (37%), Positives = 62/106 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L EGE K++ DTK +A TF EDHT+GNL+R +L D +FA
Sbjct: 1 MNAPDRFELFLLGEGESKLRVDPDTKAPNAIVVTFEKEDHTLGNLIRAELLNDPKVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HPL +++QT +DA+ +A + N+ ++ F+
Sbjct: 61 YKVEHPLFARFKMRIQTMEGYDPKDALKNACNGIINKLGVLKTNFE 106
[121][TOP]
>UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F
Length = 99
Score = 82.0 bits (201), Expect = 3e-14
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +1
Query: 220 VKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTN 399
+ + DTK+ +A FT EDHT+GN+LR QL D +FAGY++PHPLE V++VQT
Sbjct: 1 ITIEKDTKVPNAAIFTVNKEDHTLGNILRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTT 60
Query: 400 GTKSCEDAMMHALEDLANEYHIMLEEFD 483
S ++A +A+ DL +E ++ E F+
Sbjct: 61 PDYSPQEAFTNAITDLISEISLLEERFN 88
[122][TOP]
>UniRef100_Q6FVE8 Strain CBS138 chromosome A complete sequence n=1 Tax=Candida
glabrata RepID=Q6FVE8_CANGA
Length = 120
Score = 82.0 bits (201), Expect = 3e-14
Identities = 40/106 (37%), Positives = 60/106 (56%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L EGE K+K DTK +A TF EDHT+GNL+R +L D +FA
Sbjct: 1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDNKVLFAA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFD 483
Y++ HP +++QT +DA+ +A + N+ + F+
Sbjct: 61 YKVEHPFFARFKLRIQTVEGYDPKDALRNACSSIINKLGALKSNFE 106
[123][TOP]
>UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4
(RasGAP-activating-like protein 2) (Calcium-promoted Ras
inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348
Length = 763
Score = 81.3 bits (199), Expect = 5e-14
Identities = 36/92 (39%), Positives = 59/92 (64%)
Frame = +1
Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
++ DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT
Sbjct: 664 RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 723
Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
S ++A +A+ DL +E ++ E F A+
Sbjct: 724 TPDYSPQEAFTNAITDLISELSLLEERFRVAI 755
[124][TOP]
>UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus
RepID=UPI00003AB60B
Length = 100
Score = 81.3 bits (199), Expect = 5e-14
Identities = 36/92 (39%), Positives = 59/92 (64%)
Frame = +1
Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
++ DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT
Sbjct: 1 RITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQT 60
Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
S ++A +A+ DL +E ++ E F A+
Sbjct: 61 TPDYSPQEAFTNAITDLISELSLLEERFRVAI 92
[125][TOP]
>UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J
n=1 Tax=Taeniopygia guttata RepID=UPI000194D687
Length = 113
Score = 80.5 bits (197), Expect = 9e-14
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +1
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S
Sbjct: 20 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 79
Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
++A +A+ DL +E ++ E F A+
Sbjct: 80 QEAFTNAITDLISELSLLEERFRVAI 105
[126][TOP]
>UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1
Tax=Pan troglodytes RepID=UPI0000E2167E
Length = 262
Score = 80.5 bits (197), Expect = 9e-14
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +1
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S
Sbjct: 169 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 228
Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
++A +A+ DL +E ++ E F A+
Sbjct: 229 QEAFTNAITDLISELSLLEERFRVAI 254
[127][TOP]
>UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan
troglodytes RepID=UPI0000E21685
Length = 576
Score = 79.7 bits (195), Expect = 2e-13
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +1
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
DTK+ +A FT EDHT+GN+++ QL D +FAGY++PHPLE ++++VQT S
Sbjct: 441 DTKVSNACLFTINKEDHTLGNIIKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSP 500
Query: 415 EDAMMHALEDLANEYHIMLEEF 480
++A +A+ DL +E ++ E F
Sbjct: 501 QEAFTNAITDLISELSLLEERF 522
[128][TOP]
>UniRef100_A9BKX6 Rpb11 n=1 Tax=Cryptophyta RepID=A9BKX6_9CRYP
Length = 106
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/97 (40%), Positives = 59/97 (60%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N P+ VLPE +K+ + D K K+ G F EDHT+G+L+ +L +KS +F+GY
Sbjct: 3 NTPNALESLVLPETLQKITFYKDEKNKNCGYFKIEKEDHTLGHLIHSKLLKEKSVIFSGY 62
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEY 459
+ PHPLE + +K+ T+G S +DA L+DL E+
Sbjct: 63 KRPHPLEHFIYLKIITDGVFSPKDAFDSVLKDLYIEF 99
[129][TOP]
>UniRef100_Q9C256 Related to DNA-directed RNA polymerase 13.3K chain n=1
Tax=Neurospora crassa RepID=Q9C256_NEUCR
Length = 133
Score = 79.3 bits (194), Expect = 2e-13
Identities = 38/110 (34%), Positives = 64/110 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L +GE+K++ K T + + F EDHT+GNLL L + AG
Sbjct: 1 MNAPDRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
Y+I HP P + +++QT+G+ + +A++ A + L Y + EF + ++
Sbjct: 61 YKIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 110
[130][TOP]
>UniRef100_B6K818 DNA-directed RNA polymerase II complex subunit Rpb11 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6K818_SCHJY
Length = 123
Score = 79.0 bits (193), Expect = 3e-13
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP+RY + + G KV Y+ DTK + T EDHT+ N+LR QL D+ VFAG
Sbjct: 1 MNQPERY-ELIELMGLPKVTYELDTKSPNTANITIEKEDHTLANMLRTQLLYDERVVFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
YR+PHPL +++VQT S + A++ A + L
Sbjct: 60 YRVPHPLNHNFILRVQTTEECSPKQAIIDASKSL 93
[131][TOP]
>UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
ATCC 50983 RepID=C5LKR8_9ALVE
Length = 149
Score = 77.4 bits (189), Expect = 8e-13
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +1
Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
N+PD LPEG ER++ Y+ + + + GTFT EDHT + LR +L ++
Sbjct: 12 NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71
Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
FAGY++PHPLE ++++VQ + +AM AL+ L ++ + +EFD+++ A
Sbjct: 72 QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128
[132][TOP]
>UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
ATCC 50983 RepID=C5KDT1_9ALVE
Length = 149
Score = 77.4 bits (189), Expect = 8e-13
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +1
Query: 169 NQPDRYVQFVLPEG-------ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADK 327
N+PD LPEG ER++ Y+ + + + GTFT EDHT + LR +L ++
Sbjct: 12 NKPDPDEILQLPEGDEHLHGGERRIYYEPELRQDNTGTFTIWLEDHTAAHALRSELLRNR 71
Query: 328 STVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
FAGY++PHPLE ++++VQ + +AM AL+ L ++ + +EFD+++ A
Sbjct: 72 QVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEFDRSLKA 128
[133][TOP]
>UniRef100_B6AF09 RNA polymerase II subunit RPB11, putative n=1 Tax=Cryptosporidium
muris RN66 RepID=B6AF09_9CRYT
Length = 121
Score = 77.4 bits (189), Expect = 8e-13
Identities = 35/92 (38%), Positives = 59/92 (64%)
Frame = +1
Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
+VK++ ++++ G+F EDHT+GNLLR QL D S +FA Y++PHPLEP++ +++QT
Sbjct: 23 RVKWEVESRVPCCGSFMIMLEDHTLGNLLRTQLLRDPSVIFAAYKVPHPLEPMVQIRIQT 82
Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
T + AM +A++ + E + F A+
Sbjct: 83 RETTTPFVAMQNAIQMILAETQTVANTFKDAM 114
[134][TOP]
>UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II
RepID=A3FPR0_CRYPV
Length = 115
Score = 75.5 bits (184), Expect = 3e-12
Identities = 31/92 (33%), Positives = 60/92 (65%)
Frame = +1
Query: 217 KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT 396
+V++K ++++ G+F EDHT+GNL+ QL D + +FAGY++PHPLEP++ +++QT
Sbjct: 17 RVQWKVESRVPCCGSFMIMLEDHTLGNLITTQLLRDPNVIFAGYKVPHPLEPLVQIRIQT 76
Query: 397 NGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
+ A+ +A++ + E ++L F ++
Sbjct: 77 RENTTPFVAIQNAIKSIQMESQVILNSFKDSM 108
[135][TOP]
>UniRef100_C6K0F4 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=1
Tax=Anopheles gambiae RepID=C6K0F4_ANOGA
Length = 79
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +1
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSC 414
D K+ +A FT EDHT+GN++R QL D + +FAGY++PHPLE V+++QT S
Sbjct: 6 DMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSP 65
Query: 415 EDAMMHALEDLANE 456
+A M A+ DL +E
Sbjct: 66 HEAFMXAITDLLSE 79
[136][TOP]
>UniRef100_C7YU34 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YU34_NECH7
Length = 136
Score = 75.1 bits (183), Expect = 4e-12
Identities = 35/103 (33%), Positives = 57/103 (55%)
Frame = +1
Query: 172 QPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYR 351
Q + F+L +GE+K++ K + + + F + EDHT+GNLL L + AGY+
Sbjct: 12 QDSPFELFILDDGEKKIEEKVFSGMSNTSDFVLKKEDHTLGNLLSEHLKMHPNVYMAGYK 71
Query: 352 IPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
I HP P + ++VQT+GT + D E L N+ ++ +EF
Sbjct: 72 IAHPNVPELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 114
[137][TOP]
>UniRef100_UPI0000F2E4EB PREDICTED: similar to RPB11a protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2E4EB
Length = 96
Score = 74.7 bits (182), Expect = 5e-12
Identities = 36/94 (38%), Positives = 54/94 (57%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN P + F+L EGE+K+ TK+ A FT EDH +GN+++ QL +FAG
Sbjct: 1 MNAPLVFKSFLLFEGEKKIAINKHTKVPSACLFTINKEDHILGNIIKSQLLEAPQMLFAG 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
Y++P PLE V+ +QT ++ M+A+ DL
Sbjct: 61 YKVPDPLEHKTVIPIQTTPDYHSQETFMNAIPDL 94
[138][TOP]
>UniRef100_Q7RVT9 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7RVT9_NEUCR
Length = 141
Score = 74.7 bits (182), Expect = 5e-12
Identities = 35/109 (32%), Positives = 64/109 (58%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
++P+R+ F+L +GE+K++ K T + + F EDHT+GNLL L + AGY
Sbjct: 10 SEPNRFELFLLQDGEKKIEEKVFTGMSNTSDFKILKEDHTLGNLLAEHLKQAPHVLMAGY 69
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVS 495
+I HP P + +++QT+G+ + +A++ A + L Y + EF + ++
Sbjct: 70 KIAHPNVPELFIRIQTDGSITPREALVGACKQLVAMYGQLGREFQKELA 118
[139][TOP]
>UniRef100_Q8ILU4 RNA polymerase small subunit, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8ILU4_PLAF7
Length = 96
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 223 KYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNG 402
KY + K TF F +EDHT+GN LR L + FAGY +PHP +P + V++QT G
Sbjct: 5 KYYENLKNLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTG 64
Query: 403 TKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
K D + +L+DL N IML +F++A+
Sbjct: 65 -KPAIDILKESLDDLGNMCDIMLNKFNEAL 93
[140][TOP]
>UniRef100_A4R2Q3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4R2Q3_MAGGR
Length = 130
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+L GE K+ +T + + FTF+ EDHT+GN+L L + + AG
Sbjct: 1 MNAPDRFELFLLEPGEEKLTETINTSMSNTSDFTFKKEDHTLGNMLTEHLKQHPNVLMAG 60
Query: 346 YRIPHPLEPVMVVKVQTNG---TKSC-EDA---MMHALEDLANEY 459
Y++ HP P +++QT+G K+C DA ++H+L + E+
Sbjct: 61 YKVSHPNVPEFFLRIQTDGKVTPKACLLDACRTILHSLGQIRTEF 105
[141][TOP]
>UniRef100_UPI000023DEF8 hypothetical protein FG06818.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023DEF8
Length = 239
Score = 72.8 bits (177), Expect = 2e-11
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = +1
Query: 193 FVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEP 372
F+L EGE+K++ K + + + F EDHT+GNLL L + AGY+I HP P
Sbjct: 122 FLLGEGEKKIEEKVFSGMSNTSDFVLMKEDHTLGNLLSEHLKMHPNVHMAGYKIAHPNVP 181
Query: 373 VMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
+ ++VQT+GT + D E L N+ ++ +EF
Sbjct: 182 ELFIRVQTDGTITPRDVFTSVCEKLINQLEMLHQEF 217
[142][TOP]
>UniRef100_B0E866 DNA-directed RNA polymerase II subunit RPB11, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0E866_ENTDI
Length = 112
Score = 72.4 bits (176), Expect = 2e-11
Identities = 38/108 (35%), Positives = 64/108 (59%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PD +V+ E+K+ + + + FTF EDHT GN+LR+ L + +FAG
Sbjct: 1 MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTFVKEDHTAGNILRVMLLRNPHVLFAG 57
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
YR PHPL ++ + ++T+ T + + A+ A++D+ +E IM EF+ +
Sbjct: 58 YRQPHPLNYIIEMTIRTDTTITPKQALEQAMDDVIHEIEIMQNEFESS 105
[143][TOP]
>UniRef100_A0BUX3 Chromosome undetermined scaffold_13, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BUX3_PARTE
Length = 129
Score = 72.4 bits (176), Expect = 2e-11
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = +1
Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390
E +V + + K+ +A EDHTIGNL RM L K F+GYR HPL+ + +KV
Sbjct: 24 ESRVILEDEKKMNNACCVKLYLEDHTIGNLTRMNLLKQKEVTFSGYRQIHPLQHTIEIKV 83
Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
QTNG+ DA+ +DL++E+ + EE+ + V+ H
Sbjct: 84 QTNGSIKPYDAIQKTFQDLSDEFKNLEEEWARKVAEKEKH 123
[144][TOP]
>UniRef100_P87123 DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Schizosaccharomyces pombe RepID=RPB11_SCHPO
Length = 123
Score = 72.4 bits (176), Expect = 2e-11
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MNQP+RY + + G KV Y+ D+K +A T EDHT+ N+L QL +D+ +FAG
Sbjct: 1 MNQPERY-ELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDL 447
Y++PHPL +++VQT S + ++ A + L
Sbjct: 60 YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSL 93
[145][TOP]
>UniRef100_C4LXS9 RNA polymerases II subunit, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4LXS9_ENTHI
Length = 112
Score = 70.9 bits (172), Expect = 7e-11
Identities = 39/108 (36%), Positives = 63/108 (58%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PD +V+ E+K+ + + + FT EDHT GN+LR+ L + +FAG
Sbjct: 1 MNAPDLNEIYVMKPNEQKILCEENGHVCK---FTLVKEDHTAGNILRVMLLRNPHVLFAG 57
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
YR PHPL V+ + ++T+ T + + A+ A++D+ +E IM EF+ A
Sbjct: 58 YRQPHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEFEAA 105
[146][TOP]
>UniRef100_Q4U9J3 RNA polymerases I and III subunit (RPC19 homologue), putative n=1
Tax=Theileria annulata RepID=Q4U9J3_THEAN
Length = 90
Score = 68.6 bits (166), Expect = 4e-10
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF +EDHT+GN LR L VFAGY +PHP+EP M +++QT G + E + L
Sbjct: 12 TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNIRIQTTGQPAVE-VFLDCL 70
Query: 439 EDLANEYHIMLEEFDQAV 492
+D+ I+ E+F++A+
Sbjct: 71 DDMVKICDILREKFEKAI 88
[147][TOP]
>UniRef100_Q4N286 RNA polymerase small subunit, putative n=1 Tax=Theileria parva
RepID=Q4N286_THEPA
Length = 92
Score = 68.6 bits (166), Expect = 4e-10
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF +EDHT+GN LR L VFAGY +PHP+EP M V++QT G + E + L
Sbjct: 12 TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNVRIQTTGQPAVE-VFLDCL 70
Query: 439 EDLANEYHIMLEEFDQAV 492
+D+ I+ E+F++A+
Sbjct: 71 DDMVKICDILTEKFEKAM 88
[148][TOP]
>UniRef100_Q4YZZ7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Plasmodium berghei str. ANKA RepID=RPB11_PLABA
Length = 126
Score = 68.6 bits (166), Expect = 4e-10
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N+P+ VLP GE KVK + K D FT + EDHTIGNL++ L D FA Y
Sbjct: 8 NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66
Query: 349 RIPHPLEPVMVVKVQTNG 402
R PHPL+ V+ + ++ G
Sbjct: 67 RQPHPLQNVIEITIRPKG 84
[149][TOP]
>UniRef100_Q4N0T0 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
RepID=Q4N0T0_THEPA
Length = 133
Score = 67.8 bits (164), Expect = 6e-10
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
S +N+P+ L +G +KV++ DT+ GTF EDHT G+L+R +L D F
Sbjct: 6 SLINKPETADMVELAQGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRSKLSKDDRVTF 65
Query: 340 AGYRIPHPLEPVMVVKVQT 396
GYR+PHPLE + ++++T
Sbjct: 66 VGYRMPHPLENKLEIRIRT 84
[150][TOP]
>UniRef100_B6JWF5 DNA-directed RNA polymerase I and III subunit Rpc19 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JWF5_SCHJY
Length = 123
Score = 67.8 bits (164), Expect = 6e-10
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +1
Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAG-TFTFRSEDHTIGNLLRMQLHADKSTV 336
+AM Y L +G KV A TF + EDHT+GN LR + +
Sbjct: 2 AAMTDVRDYGSITLDQGLEKVTILAGHSADYTSVTFQIQKEDHTLGNALRYMIMKNPDVE 61
Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
F GY IPHP E M +++QT T + DA+ L+DL + ++ E F++ +S ++
Sbjct: 62 FCGYSIPHPSEAKMNLRIQTKSTTTAIDALKKGLDDLMDLCDVVTESFNEQLSEST 117
[151][TOP]
>UniRef100_Q4UD30 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria annulata
RepID=Q4UD30_THEAN
Length = 124
Score = 67.4 bits (163), Expect = 8e-10
Identities = 34/98 (34%), Positives = 56/98 (57%)
Frame = +1
Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
S +N+P+ L G +KV++ DT+ GTF EDHT G+L+R +L D F
Sbjct: 6 SLINKPETADMVELAHGLKKVEWIPDTRFPLCGTFIVHLEDHTFGSLIRTKLSKDDRVTF 65
Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLAN 453
GYR+PHPLE + ++++T T + ++ A+ ++ N
Sbjct: 66 VGYRMPHPLENKLEIRIRTK-TDNPFTVILSAITNIRN 102
[152][TOP]
>UniRef100_B3LAK8 RNA polymerase small subunit, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3LAK8_PLAKH
Length = 94
Score = 67.4 bits (163), Expect = 8e-10
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G + + + AL
Sbjct: 17 TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTG-EPAVNILKDAL 75
Query: 439 EDLANEYHIMLEEFDQAV 492
+DL+N IML +FD AV
Sbjct: 76 DDLSNICDIMLNKFDSAV 93
[153][TOP]
>UniRef100_Q4XS21 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Plasmodium chabaudi RepID=RPB11_PLACH
Length = 126
Score = 67.0 bits (162), Expect = 1e-09
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N+P+ VLP GE KVK + K D FT + EDHTIGNL++ L D FA Y
Sbjct: 8 NKPENVDLLVLPHGEEKVKCQISDK-GDCNIFTIKLEDHTIGNLIKQSLCQDPKVTFAAY 66
Query: 349 RIPHPLEPVMVVKVQTNG 402
R PHPL+ + + ++ G
Sbjct: 67 RQPHPLQNAIEITIRPKG 84
[154][TOP]
>UniRef100_C3YY41 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3YY41_BRAFL
Length = 117
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKY----KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKST 333
MN P + F+L EGE+K + AD +L S+ I +R QL D
Sbjct: 1 MNAPPTFESFLLFEGEKKSSFLATIDADARLVSV---LVASQILEIAKSIRQQLLKDPQV 57
Query: 334 VFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
+FAGY++PHPLE V+++QT S ++A +A+ DL +E ++ E F AV
Sbjct: 58 IFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERFKVAV 110
[155][TOP]
>UniRef100_A4I2U7 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
infantum RepID=A4I2U7_LEIIN
Length = 134
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +1
Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354
PD V LP G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+
Sbjct: 16 PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72
Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
PHP + + ++VQT NGT + A AL+D N LE F++
Sbjct: 73 PHPTKHNVELRVQTASNGTDAPVPAPKKALQDAINGCLKDLEVFEE 118
[156][TOP]
>UniRef100_C4R3Z5 RNA polymerase II subunit B12.5 n=1 Tax=Pichia pastoris GS115
RepID=C4R3Z5_PICPG
Length = 118
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/107 (30%), Positives = 56/107 (52%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
MN PDR+ F+LP+ K+K D+++ + F EDHT+ NLLR +L F
Sbjct: 1 MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA 60
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
Y++ HPL V+++QT + A+ A + N+ + +F++
Sbjct: 61 YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNE 107
[157][TOP]
>UniRef100_Q4YUC7 RNA polymerase small subunit, putative n=1 Tax=Plasmodium berghei
RepID=Q4YUC7_PLABE
Length = 96
Score = 65.9 bits (159), Expect = 2e-09
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +1
Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
Y + K TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G
Sbjct: 6 YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTG- 64
Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
K + + +L+DL+N I+LE+F A+ +A
Sbjct: 65 KPAINILKDSLDDLSNICTILLEKFKNALESA 96
[158][TOP]
>UniRef100_C1BN59 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
Tax=Caligus rogercresseyi RepID=C1BN59_9MAXI
Length = 102
Score = 65.5 bits (158), Expect = 3e-09
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF F+ E+HT+GN LR + + +F GY IPHP E M++++QT + +DA+ L
Sbjct: 23 TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMLLRIQTVSSVPTQDALRRGL 82
Query: 439 EDLANEYHIMLEEFDQAV 492
EDL + ++ +F+ A+
Sbjct: 83 EDLKDMCSVVSSKFNSAL 100
[159][TOP]
>UniRef100_B3LBL0 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3LBL0_PLAKH
Length = 126
Score = 65.5 bits (158), Expect = 3e-09
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N+P+ VLP GE+KV + K D FT + EDHTIGNL++ L D FA Y
Sbjct: 8 NKPENIDLLVLPPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPQVTFAAY 66
Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450
R PHPL+ + + ++ G K D + L D++
Sbjct: 67 RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103
[160][TOP]
>UniRef100_B0YC94 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
Tax=Aspergillus fumigatus A1163 RepID=B0YC94_ASPFC
Length = 229
Score = 65.1 bits (157), Expect = 4e-09
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 54/162 (33%)
Frame = +1
Query: 184 YVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNLL 303
+ FVL GE KV+ + DT+ + + FTF EDHT+GNLL
Sbjct: 53 FESFVLSPGEEKVEVETDTRKFFNQTSRCKSTTTDLMHLGIPSSSIFTFNKEDHTLGNLL 112
Query: 304 RMQLHADKSTVFAGYR----------------------------------IPHPLEPVMV 381
R +L + +FAGY+ +PHPL P
Sbjct: 113 RSRLLQNSHVIFAGYKVCPPMEAVFSSILFEVLGAFLESFGMHGSDELSQVPHPLVPKFE 172
Query: 382 VKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASM 507
++VQT+G + +DA++ A DL + I+ EF + M
Sbjct: 173 LRVQTDGEITPKDALLAACHDLVKDLGILSREFTKEYELRKM 214
[161][TOP]
>UniRef100_C1E3U1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3U1_9CHLO
Length = 100
Score = 64.7 bits (156), Expect = 5e-09
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TFT + EDHT+GN +R L+ + AGY +PHP+E + V+VQT G + AM AL
Sbjct: 7 TFTLKDEDHTMGNAVRYMLNKNPQVSLAGYSVPHPMEKSVNVRVQTTGEVTATAAMRDAL 66
Query: 439 EDLANEYHIMLEEFDQAVS 495
D+ + + + FD AV+
Sbjct: 67 LDIISVCDHVHDTFDTAVA 85
[162][TOP]
>UniRef100_Q4FYG3 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
major strain Friedlin RepID=Q4FYG3_LEIMA
Length = 134
Score = 64.7 bits (156), Expect = 5e-09
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +1
Query: 208 GERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVK 387
G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+PHP + + ++
Sbjct: 24 GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELR 83
Query: 388 VQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
VQT NGT + A AL+D + LE F++
Sbjct: 84 VQTASNGTDAPVPAPKKALQDAVDGCLKDLEVFEE 118
[163][TOP]
>UniRef100_C1BP53 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
Tax=Caligus rogercresseyi RepID=C1BP53_9MAXI
Length = 102
Score = 64.7 bits (156), Expect = 5e-09
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF F+ E+HT+GN LR + + +F GY IPHP E M +++QT + +DA+ L
Sbjct: 23 TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMPLRIQTVSSVPAQDALRRGL 82
Query: 439 EDLANEYHIMLEEFDQAV 492
EDL + ++ +F+ A+
Sbjct: 83 EDLKDMCSVVSSKFNSAL 100
[164][TOP]
>UniRef100_A5K177 RNA polymerase small subunit, putative n=1 Tax=Plasmodium vivax
RepID=A5K177_PLAVI
Length = 97
Score = 64.7 bits (156), Expect = 5e-09
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G + + + +L
Sbjct: 17 TFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRIQTTGEPAI-NILKDSL 75
Query: 439 EDLANEYHIMLEEFDQAV 492
+DL+N IML +FD V
Sbjct: 76 DDLSNICDIMLNKFDSVV 93
[165][TOP]
>UniRef100_C1N3U7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N3U7_9CHLO
Length = 109
Score = 64.3 bits (155), Expect = 7e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TFT + EDHT+GN +R L+ + AGY +PHP+E + V+VQT G + AM AL
Sbjct: 7 TFTLKDEDHTMGNAIRYMLNKNPQVALAGYSVPHPMERSVNVRVQTTGEVTATAAMRDAL 66
Query: 439 EDLANEYHIMLEEFDQAV 492
D+ + + + FD A+
Sbjct: 67 LDIISVCDHVHDTFDLAI 84
[166][TOP]
>UniRef100_Q4Y0J9 RNA polymerase small subunit, putative n=1 Tax=Plasmodium chabaudi
RepID=Q4Y0J9_PLACH
Length = 96
Score = 64.3 bits (155), Expect = 7e-09
Identities = 34/92 (36%), Positives = 54/92 (58%)
Frame = +1
Query: 226 YKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
Y + K TF F +EDHT+GN LR L + FAGY +PHP + + +++QT G
Sbjct: 6 YFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTGE 65
Query: 406 KSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
+ + + +L+DL+N IML++F+ A+ A
Sbjct: 66 PAI-NILKDSLDDLSNICTIMLDKFNDALENA 96
[167][TOP]
>UniRef100_A4HFT2 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
braziliensis RepID=A4HFT2_LEIBR
Length = 134
Score = 64.3 bits (155), Expect = 7e-09
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +1
Query: 175 PDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRI 354
PD V LP G+RK+ + + ++ F EDHT+ NLLRM+LH AGYR+
Sbjct: 16 PDSLVD--LP-GDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRV 72
Query: 355 PHPLEPVMVVKVQT--NGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
PHP + + ++VQT NGT + A AL+D + LE F++
Sbjct: 73 PHPTKHNVELRVQTGSNGTDTPIPAPKKALQDAIDGCLKDLEMFEE 118
[168][TOP]
>UniRef100_B6HGB3 Pc20g11790 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HGB3_PENCW
Length = 137
Score = 64.3 bits (155), Expect = 7e-09
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + + F GY IPHP +P M V++QTN T + +A+
Sbjct: 45 AASFQFEGEGHTMGNALRYAIMKNPAVEFCGYTIPHPSDPKMNVRIQTNDTTTALEALEK 104
Query: 433 ALEDLANEYHIMLEEFDQA 489
+DL + ++ E+F A
Sbjct: 105 GFDDLMDLCDVVTEKFTAA 123
[169][TOP]
>UniRef100_Q4E3C1 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4E3C1_TRYCR
Length = 133
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = +1
Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
+G RK+ + +K+ ++ F EDHT+ NLLRM+LH D AGYR+PHP + + +
Sbjct: 24 KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83
Query: 385 KVQTNG------TKSCEDAMMHALE 441
+VQT+ S +DA++ A++
Sbjct: 84 RVQTSSDGSGRPIPSPKDALLKAID 108
[170][TOP]
>UniRef100_Q4DI42 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4DI42_TRYCR
Length = 133
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = +1
Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
+G RK+ + +K+ ++ F EDHT+ NLLRM+LH D AGYR+PHP + + +
Sbjct: 24 KGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVEL 83
Query: 385 KVQTNG------TKSCEDAMMHALE 441
+VQT+ S +DA++ A++
Sbjct: 84 RVQTSSDGSGRPIPSPKDALLKAID 108
[171][TOP]
>UniRef100_Q0UWS5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UWS5_PHANO
Length = 203
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Frame = +1
Query: 181 RYVQFVLPEGERKVKYKADTK--------------------LKDAGTFTFRSEDHTIGNL 300
R+ F+L +G++K++YK +T+ + + G FTF EDHT+GNL
Sbjct: 59 RFELFLLDDGQQKIEYKEETRKSTYHPALPSDTQANPTTLGVPNTGIFTFNKEDHTLGNL 118
Query: 301 LRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEF 480
+ +L F+ Y++PHPL ++V T+G+ + +DA++ + + + F
Sbjct: 119 ISQRLLKYPYITFSAYKVPHPLFATFELRVSTDGSITPKDAIIACCRQVVQDLEDLKRSF 178
[172][TOP]
>UniRef100_A5JZ41 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1
Tax=Plasmodium vivax RepID=A5JZ41_PLAVI
Length = 126
Score = 62.4 bits (150), Expect = 3e-08
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N+P+ VL GE+KV + K D FT + EDHTIGNL++ L D FA Y
Sbjct: 8 NKPENIDLLVLAPGEKKVSCEISEK-GDCNIFTIKLEDHTIGNLIKQALCQDPKVTFAAY 66
Query: 349 RIPHPLEPVMVVKVQTN---GTKSCEDAMMHALEDLA 450
R PHPL+ + + ++ G K D + L D++
Sbjct: 67 RQPHPLQNTIEITIKPKGYAGVKLLSDNVNSLLSDVS 103
[173][TOP]
>UniRef100_C0PNM4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PNM4_MAIZE
Length = 88
Score = 62.0 bits (149), Expect = 3e-08
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQL 315
MN PDRY +FV+PEG +KV Y+ DTK+ +A +FT EDHT+G+ Q+
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGSCTETQM 50
[174][TOP]
>UniRef100_A7TTT6 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TTT6_VANPO
Length = 128
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/111 (27%), Positives = 60/111 (54%)
Frame = +1
Query: 160 SAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVF 339
+ + + D ++ + E + K+ +A ++ +F EDHT+GN LR + + F
Sbjct: 15 TVIEEVDVEMESTVDEDKIKILPQATSEDGTCASFQIMDEDHTLGNALRYIIMKNPEVEF 74
Query: 340 AGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
GY IPHP E ++ +++QT G+ + +A+ L DL + ++ E+F Q +
Sbjct: 75 CGYSIPHPSENLLNLRIQTYGSTTAVEALQKGLGDLMDMCDVVEEKFTQRI 125
[175][TOP]
>UniRef100_Q22RW2 DNA-directed RNA polymerase I subunit D n=1 Tax=Tetrahymena
thermophila SB210 RepID=Q22RW2_TETTH
Length = 150
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +1
Query: 211 ERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKV 390
E K+ + K + T+TF EDHT+GN +R L K F GY IPHP E M +++
Sbjct: 46 EEKLVIDQNEKDRTCATYTFYDEDHTLGNTVRYMLVKRKDVEFCGYTIPHPSENKMNLRL 105
Query: 391 QTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
QT K+ + + L+ LA ++ ++FD A+
Sbjct: 106 QTI-KKNSNEVLKEGLDSLAGLCDVLNDKFDAAM 138
[176][TOP]
>UniRef100_A4YHV0 DNA-directed RNA polymerase subunit L n=1 Tax=Metallosphaera sedula
DSM 5348 RepID=RPOL_METS5
Length = 90
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/72 (38%), Positives = 47/72 (65%)
Frame = +1
Query: 271 RSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLA 450
+ EDHT+GNL+ +L + K + A Y +PHPL+ +V+K++T+GT S +A+ A+ED+
Sbjct: 18 QGEDHTLGNLIAGRLRSVKGVILATYYLPHPLKDELVIKIKTDGTISPREALNRAIEDVK 77
Query: 451 NEYHIMLEEFDQ 486
L+E +Q
Sbjct: 78 VLGESFLDELEQ 89
[177][TOP]
>UniRef100_Q8IER7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
Tax=Plasmodium falciparum 3D7 RepID=RPB11_PLAF7
Length = 126
Score = 61.6 bits (148), Expect = 4e-08
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
N+P+ VL GE+KV K D F + EDHTIGNL+++QL D +FA Y
Sbjct: 8 NKPETVDLLVLAPGEKKVTCTISDK-GDCNIFVIKLEDHTIGNLIKIQLCQDPKVLFAAY 66
Query: 349 RIPHPLEPVMVVKVQTNG 402
R PHPL+ + + ++ G
Sbjct: 67 RQPHPLQNAIEITIKPKG 84
[178][TOP]
>UniRef100_Q01D46 Trithorax-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D46_OSTTA
Length = 2007
Score = 61.2 bits (147), Expect = 6e-08
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 232 ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK- 408
A T TFT EDHT+GN LR L+A+ S GY PHP+E + V+VQT+G +
Sbjct: 1912 APTAANAEATFTLEGEDHTLGNALRYVLNANPSVTLCGYSAPHPMERRVNVRVQTHGREG 1971
Query: 409 -SCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
+ AM AL D+ + + E +++A A
Sbjct: 1972 ATARGAMRDALLDVISVCDHVHESYEKAERA 2002
[179][TOP]
>UniRef100_A9SFX7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SFX7_PHYPA
Length = 118
Score = 61.2 bits (147), Expect = 6e-08
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF+ EDHT+GN LR L+ D F GY +PHP E + V+VQT G + D + AL
Sbjct: 13 TFSISDEDHTLGNSLRFVLNKDPRVAFCGYSVPHPSETRINVRVQTTGVPA-RDVLKDAL 71
Query: 439 EDL-------ANEYHIMLEEF--DQAVSAASMH*DAAAVTAEWRGGFKCP 561
DL + ++ +E F +Q V+ SM + VT++ G K P
Sbjct: 72 NDLMAMNQHVSTTFNRAVETFKANQGVNELSM---KSGVTSQHSGSVKKP 118
[180][TOP]
>UniRef100_C5KJH4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5KJH4_9ALVE
Length = 256
Score = 61.2 bits (147), Expect = 6e-08
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +1
Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHA 435
GT+ ++EDHT+GN +R L + FAGY +PHP EP + ++VQT + +++M+ A
Sbjct: 9 GTYQLKNEDHTLGNSVRYVLAKNPKVDFAGYSVPHPNEPFVNIRVQTYPGMTADESMIWA 68
Query: 436 LEDL 447
LE+L
Sbjct: 69 LEEL 72
[181][TOP]
>UniRef100_Q6C4D6 YALI0E27676p n=1 Tax=Yarrowia lipolytica RepID=Q6C4D6_YARLI
Length = 140
Score = 61.2 bits (147), Expect = 6e-08
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +1
Query: 247 KDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAM 426
K A +F F EDHTIGN L+ + + F GY IPHP E + +++QT G + +A+
Sbjct: 52 KTACSFQFTEEDHTIGNALQYIIMKNPEVEFCGYSIPHPSEAKLNIRIQTYGDITAIEAL 111
Query: 427 MHALEDLANEYHIMLEEFDQAVS 495
L+DL ++ +F AV+
Sbjct: 112 QKGLDDLIQACDVVKNKFTDAVT 134
[182][TOP]
>UniRef100_A3LQW8 RNA polymerase I and III subunit n=1 Tax=Pichia stipitis
RepID=A3LQW8_PICST
Length = 119
Score = 61.2 bits (147), Expect = 6e-08
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F EDHT+GN LR + + F GY IPHP E + +++QT G + +A+
Sbjct: 30 AASFQILEEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITAVEALHQ 89
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++LA ++ ++F++ +SA
Sbjct: 90 GLDNLAELCTVIGDKFEEKISA 111
[183][TOP]
>UniRef100_A5DL81 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DL81_PICGU
Length = 123
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A TF EDHT+GN LR + + F GY IPHP E M +++QT G S +A+
Sbjct: 34 AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ ++ +F + +SA
Sbjct: 94 GLDNLSELCTVIETKFSEKISA 115
[184][TOP]
>UniRef100_C5DRN5 ZYRO0B09878p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DRN5_ZYGRC
Length = 130
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/108 (30%), Positives = 55/108 (50%)
Frame = +1
Query: 169 NQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGY 348
++PDR +LP+ A ++ +F EDHT+GN LR + + F GY
Sbjct: 28 DEPDREKIKILPQ--------ATSEDGTCASFQIAEEDHTLGNALRYMIMKNPDVEFCGY 79
Query: 349 RIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
IPHP E ++ ++VQT G + D + L+DL + + ++F Q +
Sbjct: 80 SIPHPSENLLNIRVQTYGNVTAVDVLHKGLQDLMDLCDAVEDKFTQKI 127
[185][TOP]
>UniRef100_B2WFP6 RNA polymerase II subunit n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2WFP6_PYRTR
Length = 183
Score = 60.5 bits (145), Expect = 1e-07
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +1
Query: 157 RSAMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTV 336
++ M +R+ F+L EG++KV+ KA+T++ + FTF EDHT+GNLL +L + + +
Sbjct: 73 KADMGPANRFELFLLDEGQQKVEEKAETRVPNTAVFTFNKEDHTLGNLLSARLQKNPAIL 132
Query: 337 FAGYR 351
FA Y+
Sbjct: 133 FAAYK 137
[186][TOP]
>UniRef100_A9NNU7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NNU7_PICSI
Length = 107
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ TF F EDHT+GN LR L+ D F GY IPHP + + ++VQT G + +D +
Sbjct: 11 SSTFAFNDEDHTLGNSLRYVLNHDPRVEFCGYSIPHPSDNRVNIRVQTTGDPA-KDVLKD 69
Query: 433 ALEDLANEYHIMLEEFDQAV 492
AL+DL + + F +AV
Sbjct: 70 ALQDLMVVCQQVRQTFGKAV 89
[187][TOP]
>UniRef100_B9WL57 DNA-directed RNA polymerase subunit, common to RNA polymerases I
and III, putative n=1 Tax=Candida dubliniensis CD36
RepID=B9WL57_CANDC
Length = 130
Score = 60.1 bits (144), Expect = 1e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+
Sbjct: 41 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 100
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ + ++FD+AV A
Sbjct: 101 GLDNLSELCSAIEDKFDEAVKA 122
[188][TOP]
>UniRef100_Q386T9 DNA-directed RNA polymerase II, putative n=2 Tax=Trypanosoma brucei
RepID=Q386T9_9TRYP
Length = 132
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +1
Query: 214 RKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQ 393
RK+ + +K+ ++ F EDHT+ NLLRM+LH + AGYR+PHP + + ++VQ
Sbjct: 26 RKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQ 85
Query: 394 T--NGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
T +GT AL + LEEF+ A
Sbjct: 86 TSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGA 119
[189][TOP]
>UniRef100_B9PJ94 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1
Tax=Toxoplasma gondii GT1 RepID=B9PJ94_TOXGO
Length = 178
Score = 59.7 bits (143), Expect = 2e-07
Identities = 36/101 (35%), Positives = 52/101 (51%)
Frame = +1
Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
L G KV++ DT+ GTF F ED+TIG ++R L D F G R PHPLEP +
Sbjct: 19 LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78
Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAA 501
+++QT + S ++ +L ++ F AV AA
Sbjct: 79 ELRIQT-VSSSPFTLVLESLRKRKAGLSLLKARFKAAVGAA 118
[190][TOP]
>UniRef100_P28000 DNA-directed RNA polymerases I and III subunit RPAC2 n=5
Tax=Saccharomyces cerevisiae RepID=RPAC2_YEAST
Length = 142
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 202 PEGER-KVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
P+ E+ K+ +A ++ + +F EDHT+GN LR + + F GY IPHP E ++
Sbjct: 42 PDREKIKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLL 101
Query: 379 VVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSA 498
+++QT G + DA+ L+DL + ++ +F + + +
Sbjct: 102 NIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIKS 141
[191][TOP]
>UniRef100_B6K9P6 RNA polymerase II subunit RPB11, putative n=2 Tax=Toxoplasma gondii
RepID=B6K9P6_TOXGO
Length = 178
Score = 59.3 bits (142), Expect = 2e-07
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +1
Query: 199 LPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVM 378
L G KV++ DT+ GTF F ED+TIG ++R L D F G R PHPLEP +
Sbjct: 19 LAPGVHKVEWVPDTRFPLCGTFVFHLEDYTIGYIIRNDLLNDPRVKFVGLRQPHPLEPKI 78
Query: 379 VVKVQT 396
+++QT
Sbjct: 79 ELRIQT 84
[192][TOP]
>UniRef100_A7AT13 RNA polymerase small subunit protein, putative n=1 Tax=Babesia
bovis RepID=A7AT13_BABBO
Length = 96
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF+ +EDHT+GN +R L + FAGY +PHP++P + +++QT G K + L
Sbjct: 12 TFSIENEDHTLGNAVRTLLVEREDVFFAGYSVPHPMQPEVNIRIQTTG-KPAVKIFVECL 70
Query: 439 EDLANEYHIMLEEFDQA 489
+DL +++ + F A
Sbjct: 71 DDLVEVCNVLTKAFIDA 87
[193][TOP]
>UniRef100_A5DS75 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5DS75_LODEL
Length = 135
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +1
Query: 211 ERKVKYKADT------KLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTVFAGYRIPHPL 366
E ++ Y AD L+D + +F+ EDHT+GN LR + + F GY IPHP
Sbjct: 24 EEEIIYDADKIRILPGSLEDGTSASFQILDEDHTLGNALRYMIMKNPEVEFCGYSIPHPS 83
Query: 367 EPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQ 486
E + V++QT G S +A+ L++L+ ++ E+F++
Sbjct: 84 ENKLNVRIQTYGNISAVEALHQGLDNLSELCDVVEEKFEE 123
[194][TOP]
>UniRef100_Q54ES6 DNA-directed RNA polymerases I and III subunit rpc19 n=1
Tax=Dictyostelium discoideum RepID=RPC19_DICDI
Length = 116
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +1
Query: 250 DAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMM 429
D TF F EDHT+GN L L + F+GY IPHP + M +++QT + +++++
Sbjct: 34 DCATFIFTDEDHTLGNALHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKSNITAQESLL 93
Query: 430 HALEDLANEYHIMLEEFDQAV 492
L D+ + + E F+ A+
Sbjct: 94 QGLTDIKDISRHIFETFNNAL 114
[195][TOP]
>UniRef100_A4HGR0 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania
braziliensis RepID=A4HGR0_LEIBR
Length = 137
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/87 (39%), Positives = 46/87 (52%)
Frame = +1
Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417
T + TF EDHT+GN LR L + + AGY IPHPLEP M++ VQ +
Sbjct: 42 TDSESTAVVTFSHEDHTLGNPLRHVLMQNVAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99
Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSA 498
+A+ H LE LA + FD+ + A
Sbjct: 100 EAVAHGLERLAEICDDTISSFDKCMVA 126
[196][TOP]
>UniRef100_Q6CIV1 KLLA0F23760p n=1 Tax=Kluyveromyces lactis RepID=Q6CIV1_KLULA
Length = 127
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +1
Query: 163 AMNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFR--SEDHTIGNLLRMQLHADKSTV 336
A Q D+ Q K+K + +D + +FR EDHT+GN LR + +
Sbjct: 13 AAEQNDQVDQVEEEVDSEKIKLLTEATSEDGTSASFRITDEDHTLGNTLRYMIMKNPEVE 72
Query: 337 FAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
F GY IPHP E + +++QT G + +A+ L DL + + + F Q +
Sbjct: 73 FCGYSIPHPSENFLHIRIQTYGKITAVEALHKGLGDLMDMCDAVEDRFTQRI 124
[197][TOP]
>UniRef100_UPI000180B7C9 PREDICTED: similar to LOC494863 protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7C9
Length = 109
Score = 58.5 bits (140), Expect = 4e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF +EDHT+GN LR L + F GY IPHP E M +++QT G S +A+ L
Sbjct: 25 TFIIHNEDHTLGNALRYILMKNPDIEFCGYSIPHPAENKMNLRIQTRGI-SATEALKKGL 83
Query: 439 EDLANEYHIMLEEFDQAV 492
+DL + +L+ F+ +V
Sbjct: 84 KDLNSVCEHILKTFESSV 101
[198][TOP]
>UniRef100_UPI000151BC99 hypothetical protein PGUG_04032 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151BC99
Length = 123
Score = 58.5 bits (140), Expect = 4e-07
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A TF EDHT+GN LR + + F GY IPHP E M +++QT G S +A+
Sbjct: 34 AATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNISSVEALHQ 93
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ ++ +F + + A
Sbjct: 94 GLDNLSELCTVIETKFSEKILA 115
[199][TOP]
>UniRef100_Q755Q7 AFL220Cp n=1 Tax=Eremothecium gossypii RepID=Q755Q7_ASHGO
Length = 135
Score = 58.5 bits (140), Expect = 4e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 262 FTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHALE 441
F EDHT+GN LR + + F GY IPHP E + +++QT G + DA+ L+
Sbjct: 56 FQITDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENFLNIRIQTYGKVTAVDALHKGLQ 115
Query: 442 DLANEYHIMLEEFDQAV 492
DL + ++ ++F Q +
Sbjct: 116 DLMDMCDVVEDKFTQRI 132
[200][TOP]
>UniRef100_Q59LT9 Potential RNA Polymerase I and III shared subunit Rpc19 n=1
Tax=Candida albicans RepID=Q59LT9_CANAL
Length = 131
Score = 58.5 bits (140), Expect = 4e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+
Sbjct: 42 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 101
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ + ++FD A+ A
Sbjct: 102 GLDNLSELCGAIEDKFDDAIKA 123
[201][TOP]
>UniRef100_Q0CH54 Putative uncharacterized protein n=1 Tax=Aspergillus terreus
NIH2624 RepID=Q0CH54_ASPTN
Length = 142
Score = 58.5 bits (140), Expect = 4e-07
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+
Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L+ L + ++ E+F A A
Sbjct: 110 GLDSLMDLCDVVTEKFTDARDA 131
[202][TOP]
>UniRef100_C4YL76 DNA-directed RNA polymerases I and III 14 kDa polypeptide n=1
Tax=Candida albicans RepID=C4YL76_CANAL
Length = 133
Score = 58.5 bits (140), Expect = 4e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+
Sbjct: 44 SASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 103
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ + ++FD A+ A
Sbjct: 104 GLDNLSELCGAIEDKFDDAIKA 125
[203][TOP]
>UniRef100_B8C8G2 Small RNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C8G2_THAPS
Length = 83
Score = 58.2 bits (139), Expect = 5e-07
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK-SCEDAMMHA 435
TF EDHT+GN LR L D FAGY +PHP EPV+ ++VQTN + +A+ A
Sbjct: 4 TFVLGDEDHTLGNALRHVLINDARVDFAGYCVPHPSEPVVHLRVQTNEKPLTAIEALKEA 63
Query: 436 LEDLANEYHIMLEEFD 483
L+ + LE+ +
Sbjct: 64 CSTLSKQCDFFLEQLE 79
[204][TOP]
>UniRef100_Q4PFC9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PFC9_USTMA
Length = 164
Score = 58.2 bits (139), Expect = 5e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A TF + EDHT+GN LR + D F GY PHP E + +++Q S DA+
Sbjct: 33 AVTFCLKEEDHTLGNSLRYIIMKDPRVEFCGYSNPHPSENKIHLRIQMYDNASALDALRD 92
Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504
A+E+L + + E +D+++SA +
Sbjct: 93 AIENLDQLFAAIGEAYDRSLSAGN 116
[205][TOP]
>UniRef100_C0NZW5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Ajellomyces capsulatus G186AR RepID=C0NZW5_AJECG
Length = 137
Score = 58.2 bits (139), Expect = 5e-07
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + +
Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L+DL N + E F +A +A
Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130
[206][TOP]
>UniRef100_B8MSM4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MSM4_TALSN
Length = 136
Score = 58.2 bits (139), Expect = 5e-07
Identities = 30/98 (30%), Positives = 53/98 (54%)
Frame = +1
Query: 196 VLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPV 375
V+ GE ++ + + A +F F+ E HT+GN LR + + + F GY IPHP E
Sbjct: 26 VIEHGENRITILSGAT-ETAASFQFKEEGHTLGNALRYVIMKNPAVEFCGYTIPHPSEAK 84
Query: 376 MVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
M +++QT + +A+ L+DL + ++ ++F A
Sbjct: 85 MNLRIQTYENTTAIEALEKGLDDLMDLCDVVTDKFTVA 122
[207][TOP]
>UniRef100_A6RF11 Predicted protein n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6RF11_AJECN
Length = 137
Score = 58.2 bits (139), Expect = 5e-07
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + +
Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L+DL N + E F +A +A
Sbjct: 109 GLDDLMNLCDTVTETFIEAKNA 130
[208][TOP]
>UniRef100_UPI00003BD255 hypothetical protein DEHA0A13409g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD255
Length = 134
Score = 57.8 bits (138), Expect = 6e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+
Sbjct: 45 AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 104
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ + E+F + + A
Sbjct: 105 GLDNLSELCSTIEEKFSEKIEA 126
[209][TOP]
>UniRef100_Q2HQ74 RNA polymerase I subunit RPC19 n=1 Tax=Trypanosoma brucei brucei
RepID=Q2HQ74_TRYBB
Length = 134
Score = 57.8 bits (138), Expect = 6e-07
Identities = 40/113 (35%), Positives = 58/113 (51%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
+N+ D + E ++ AD++ A T TF EDHT+GN LR + D S AG
Sbjct: 19 LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
Y IPHPLE M + VQ+ ++ + + LE LA L++F+ V A S
Sbjct: 77 YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKKFNACVEAIS 127
[210][TOP]
>UniRef100_B6KBV3 DNA-directed RNA polymerases I and III subunit RPAC2, putative n=3
Tax=Toxoplasma gondii RepID=B6KBV3_TOXGO
Length = 129
Score = 57.8 bits (138), Expect = 6e-07
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TFT EDHT+GN +R L FAGY +PHP +P M +++QT G +S + +
Sbjct: 38 TFTLTGEDHTLGNTIRSILVRKPGVEFAGYSVPHPTQPEMNIRLQTTG-ESAMQLLRESF 96
Query: 439 EDLANEYHIMLEEFDQAV 492
+DLA+ + +D+A+
Sbjct: 97 DDLASICDHLDTLYDEAL 114
[211][TOP]
>UniRef100_Q6BY26 DEHA2A12980p n=1 Tax=Debaryomyces hansenii RepID=Q6BY26_DEBHA
Length = 129
Score = 57.8 bits (138), Expect = 6e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F EDHT+GN LR + + F GY IPHP E + +++QT G S +A+
Sbjct: 40 AASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNISAVEALHQ 99
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L++L+ + E+F + + A
Sbjct: 100 GLDNLSELCSTIEEKFSEKIEA 121
[212][TOP]
>UniRef100_B2VVA3 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Pyrenophora tritici-repentis Pt-1C-BFP
RepID=B2VVA3_PYRTR
Length = 126
Score = 57.8 bits (138), Expect = 6e-07
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR +H + F GY IPHP E M +++QT S +
Sbjct: 38 AASFQFDDEDHTLGNALRYIIHKNPDVEFCGYSIPHPSEAKMNLRIQTYDGASVYTVLEK 97
Query: 433 ALEDL-------ANEYHIMLEEF 480
LEDL +Y I +EF
Sbjct: 98 GLEDLMAMCDIVEQKYTIARDEF 120
[213][TOP]
>UniRef100_A1CM75 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Aspergillus clavatus RepID=A1CM75_ASPCL
Length = 142
Score = 57.8 bits (138), Expect = 6e-07
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+
Sbjct: 50 AASFQFEGEGHTLGNALRYTIMKNPEVEFCGYTIPHPSEAKMNLRIQTYDTTNAVEALEK 109
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
LE L + ++ ++F A A
Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131
[214][TOP]
>UniRef100_UPI0001924FE8 PREDICTED: similar to polymerase (RNA) I polypeptide D, 16kDa n=1
Tax=Hydra magnipapillata RepID=UPI0001924FE8
Length = 127
Score = 57.4 bits (137), Expect = 8e-07
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF F +EDHTIGN LR + + + GY PHP EP + +++QT+ + DA+ L
Sbjct: 28 TFVFHNEDHTIGNSLRYMIMKNPEVQYCGYSNPHPSEPKINLRIQTHKI-AAPDALQKGL 86
Query: 439 EDLANEYHIMLEEFDQAV 492
DL N +L F ++V
Sbjct: 87 LDLQNVCDHVLATFQKSV 104
[215][TOP]
>UniRef100_UPI00017F079B PREDICTED: similar to DNA-directed RNA polymerases I and III
subunit RPAC2 (RNA polymerases I and III subunit AC2)
(DNA-directed RNA polymerase I subunit D) (DNA-directed
RNA polymerase I 16 kDa polypeptide) (RPA16) (RPC16)
(hRPA19) (AC19) n=1 Tax=Sus scrofa RepID=UPI00017F079B
Length = 133
Score = 57.4 bits (137), Expect = 8e-07
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
+ EGERK + A + TF EDHT+GN LR + + F GY HP E
Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77
Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH 510
+ +++QT G + L +L N +L++F+ ++ A H
Sbjct: 78 SKINLRIQTRGALPAVEPFQRGLTELMNVCQHVLDKFEASIKAYKDH 124
[216][TOP]
>UniRef100_D0A874 DNA-dependent RNA polymerases, putative n=2 Tax=Trypanosoma brucei
RepID=D0A874_TRYBG
Length = 134
Score = 57.4 bits (137), Expect = 8e-07
Identities = 40/113 (35%), Positives = 57/113 (50%)
Frame = +1
Query: 166 MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG 345
+N+ D + E ++ AD++ A T TF EDHT+GN LR + D S AG
Sbjct: 19 LNEGDEVDTSAEQKVELNLQRHADSE--SAATVTFSHEDHTLGNPLRHVIMEDPSVTSAG 76
Query: 346 YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAAS 504
Y IPHPLE M + VQ+ ++ + + LE LA L+ F+ V A S
Sbjct: 77 YAIPHPLEAKMQLHVQS--SEYAVETVAKGLERLAAICDETLKSFNACVEAIS 127
[217][TOP]
>UniRef100_Q6FLF2 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida
glabrata RepID=Q6FLF2_CANGA
Length = 137
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
+F EDHT+GN LR + + F GY IPHP E ++ +++QT G + DA+ L
Sbjct: 58 SFQIAQEDHTLGNALRYIIMKNPEVEFCGYSIPHPSEELLNLRIQTYGNITAVDALQKGL 117
Query: 439 EDLANEYHIMLEEFDQAVSA 498
+DL + + ++F Q + +
Sbjct: 118 DDLIDLCDAVKDKFVQRLQS 137
[218][TOP]
>UniRef100_B3S798 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax
adhaerens RepID=B3S798_TRIAD
Length = 92
Score = 57.0 bits (136), Expect = 1e-06
Identities = 26/88 (29%), Positives = 46/88 (52%)
Frame = +1
Query: 229 KADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTK 408
KA + +D TF E+HT+GN +R + + T GY +PHP + + ++++TN K
Sbjct: 2 KASSNRQDCQTFVLHGENHTLGNAVRYLIMKNPETKLCGYSVPHPSQHKINLRIETNNEK 61
Query: 409 SCEDAMMHALEDLANEYHIMLEEFDQAV 492
+ L+DL +L+ FD ++
Sbjct: 62 DAIEVFRTGLQDLDQVCDHVLKTFDVSI 89
[219][TOP]
>UniRef100_C6HHU3 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces
capsulatus H143 RepID=C6HHU3_AJECH
Length = 137
Score = 57.0 bits (136), Expect = 1e-06
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + +
Sbjct: 49 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEK 108
Query: 433 ALEDLANEYHIMLEEFDQA 489
L+DL N + E F +A
Sbjct: 109 GLDDLMNLCDTVTETFIEA 127
[220][TOP]
>UniRef100_Q9Y2S0 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Homo
sapiens RepID=RPAC2_HUMAN
Length = 133
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
+ EGERK + A + TF EDHT+GN LR + + F GY HP E
Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77
Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
+ +++QT GT + L +L N +L++F+ ++
Sbjct: 78 SKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASI 118
[221][TOP]
>UniRef100_C5YTE8 Putative uncharacterized protein Sb08g005640 n=1 Tax=Sorghum
bicolor RepID=C5YTE8_SORBI
Length = 108
Score = 56.6 bits (135), Expect = 1e-06
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ TF+ EDHT+ N +R L+ D F GY IPHP E + ++VQT G + +D +
Sbjct: 11 SSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTGDPA-KDVLKD 69
Query: 433 ALEDL 447
AL+DL
Sbjct: 70 ALQDL 74
[222][TOP]
>UniRef100_Q2QWI0 Os12g0194700 protein n=2 Tax=Oryza sativa RepID=Q2QWI0_ORYSJ
Length = 108
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A TF+ EDHT+ N +R L+ D F GY IPHP + + ++VQT G + +D +
Sbjct: 11 ASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTGDPA-KDVLKD 69
Query: 433 ALEDLANEYHIMLEEFDQAVS 495
+L+DL + FD AV+
Sbjct: 70 SLQDLMVMCQHVRGTFDTAVT 90
[223][TOP]
>UniRef100_Q1RMG8 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Bos
taurus RepID=RPAC2_BOVIN
Length = 133
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 187 VQFVLPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIP 357
V+ + EGERK + A + TF EDHT+GN LR + + F GY
Sbjct: 14 VKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTT 73
Query: 358 HPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
HP E + +++QT G + L DL N +L++F+ ++
Sbjct: 74 HPSESKINLRIQTRGALPAVEPFQRGLTDLMNVCQHVLDKFEASI 118
[224][TOP]
>UniRef100_A7NYN7 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NYN7_VITVI
Length = 105
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF+ EDHT+ N +R L+ D F GY IPHP + + ++VQT G S + + A
Sbjct: 13 TFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG-DSAREVLKDAC 71
Query: 439 EDLANEYHIMLEEFDQAV 492
+DL + FD+AV
Sbjct: 72 QDLMLMCQHVRSTFDKAV 89
[225][TOP]
>UniRef100_Q2H911 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H911_CHAGB
Length = 155
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F +E HT+GN LR + + F Y IPHP EP M V++QT + +A+
Sbjct: 70 AASFEFLNEGHTLGNALRYIIMKNPDVEFCAYAIPHPSEPKMNVRIQTFDGTTAVEALEK 129
Query: 433 ALEDLANEYHIMLEEF 480
L DL ++ +EF
Sbjct: 130 GLRDLQELCDVVTDEF 145
[226][TOP]
>UniRef100_C9SPR1 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
Tax=Verticillium albo-atrum VaMs.102 RepID=C9SPR1_9PEZI
Length = 146
Score = 56.2 bits (134), Expect = 2e-06
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 EGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
E E +++ + A +F F++E HT+GN LR + + F Y IPHP E +M +
Sbjct: 42 EEEEELEQRLPGSTDTAASFEFKAEGHTLGNALRYIIMKNPDVEFCAYSIPHPSEDLMNI 101
Query: 385 KVQT-NGTKSCEDAMMHALEDLANEYHIMLEEF 480
++QT +GT A+ L+DL +M +EF
Sbjct: 102 RIQTYDGT--AVSALSKGLKDLQGLCDVMTDEF 132
[227][TOP]
>UniRef100_A1DLU8 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1DLU8_NEOFI
Length = 142
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT + + +A+
Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYDSTTAVEALEK 109
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
LE L + ++ ++F A A
Sbjct: 110 GLEALMDLCDVVTDKFTSARDA 131
[228][TOP]
>UniRef100_C6LR48 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
Tax=Giardia intestinalis ATCC 50581 RepID=C6LR48_GIALA
Length = 95
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF +EDHT+GN +R L+ + FAGY +PHP EP + +++Q++ +S D ++ A
Sbjct: 7 TFVIVNEDHTLGNCIRYCLNCNPDVSFAGYSVPHPAEPKLNLRIQSD-IRSATDCLLQAA 65
Query: 439 EDLANEYHIMLEEFDQAVSAAS 504
+ + N ++ + + AS
Sbjct: 66 DLMYNIASVLRQRLAEVYEDAS 87
[229][TOP]
>UniRef100_C8V0U1 DNA-directed RNA polymerase I and III 14 kDa polypeptide
(AFU_orthologue; AFUA_6G04610) n=2 Tax=Emericella
nidulans RepID=C8V0U1_EMENI
Length = 137
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT + + +A+
Sbjct: 45 AASFQFEGEGHTLGNALRFAIMKNPEVEFCGYTIPHPSESKMNIRIQTYDSTTAVEALEK 104
Query: 433 ALEDLANEYHIMLEEFDQA 489
L+ L + ++ ++F A
Sbjct: 105 GLDTLMDLCDVVTDKFTAA 123
[230][TOP]
>UniRef100_C5JYX4 Predicted protein n=2 Tax=Ajellomyces dermatitidis
RepID=C5JYX4_AJEDS
Length = 142
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + + +
Sbjct: 54 AASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTNVFEVLEK 113
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
+DL + + E F +A +A
Sbjct: 114 GFDDLMDLCDTVTETFMEAKNA 135
[231][TOP]
>UniRef100_C4Y1Z9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y1Z9_CLAL4
Length = 154
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F EDHT+GN LR + + F GY IPHP E + +++QT G + +A+
Sbjct: 65 AASFQVLDEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNITALEALHQ 124
Query: 433 ALEDLANEYHIMLEEFDQAVSAAS 504
L++L+ + E F + V A +
Sbjct: 125 GLDNLSELCTHVEETFTEKVDAGN 148
[232][TOP]
>UniRef100_B8NDQ0 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Aspergillus flavus NRRL3357 RepID=B8NDQ0_ASPFN
Length = 142
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+
Sbjct: 50 AASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEK 109
Query: 433 ALEDLANEYHIMLEEF 480
L+ L + ++ ++F
Sbjct: 110 GLDSLMDLCDVVTDKF 125
[233][TOP]
>UniRef100_A2R4K1 Contig An15c0040, complete genome n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2R4K1_ASPNC
Length = 153
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F E HT+GN LR + + F GY IPHP E M +++QT T + +A+
Sbjct: 61 AASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYETTTAVEALEK 120
Query: 433 ALEDLANEYHIMLEEFDQA 489
L+ L + ++ ++F A
Sbjct: 121 GLDTLMDLCDVVTDKFTTA 139
[234][TOP]
>UniRef100_Q09177 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPAC2_SCHPO
Length = 125
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 438
TF + EDHT+GN LR + + F GY IPHP E M ++QT + + D + L
Sbjct: 36 TFQIQKEDHTLGNSLRYVIMKNPEVEFCGYSIPHPSEAKMNFRIQTAPSTTAVDVLRKGL 95
Query: 439 EDLANEYHIMLEEFDQ 486
+DL + + E+F +
Sbjct: 96 DDLIDLCDAVTEKFTE 111
[235][TOP]
>UniRef100_C5Y1Q7 Putative uncharacterized protein Sb05g008640 n=1 Tax=Sorghum
bicolor RepID=C5Y1Q7_SORBI
Length = 107
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/95 (34%), Positives = 44/95 (46%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
+ TF+ EDHT+ N R L+ D F GY IPHP E + ++VQT G DA
Sbjct: 11 SSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG-----DAAKD 65
Query: 433 ALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537
L+D IM + + A + A TAE
Sbjct: 66 VLKDALQNLMIMCQHVRGTLDNAVANHRAKNTTAE 100
[236][TOP]
>UniRef100_B7FZW0 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FZW0_PHATR
Length = 89
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Frame = +1
Query: 259 TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT--------NGTKSC 414
TF EDHT+GN +R L + S FAGY +PHP EPV+ ++VQT +
Sbjct: 4 TFCIGDEDHTLGNAVRHVLIRNNSIGFAGYSVPHPSEPVVQIRVQTVAPAGSRGQQPPTA 63
Query: 415 EDAMMHALEDLANEYHIMLEEFDQAV 492
A+ A + L ++ I+LE ++ +
Sbjct: 64 TGALKTACQTLYDQCDIVLERLEELI 89
[237][TOP]
>UniRef100_A4I3T4 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania
infantum RepID=A4I3T4_LEIIN
Length = 137
Score = 55.5 bits (132), Expect = 3e-06
Identities = 37/100 (37%), Positives = 48/100 (48%)
Frame = +1
Query: 238 TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCE 417
T + TF EDHT+GN LR L + + AGY IPHPLEP M++ VQ +
Sbjct: 42 TDNESTAVVTFSHEDHTLGNPLRHVLMQNAAVTSAGYAIPHPLEPKMLLHVQ--ASDYAV 99
Query: 418 DAMMHALEDLANEYHIMLEEFDQAVSAASMH*DAAAVTAE 537
+A+ LE LA + FD + H AAA E
Sbjct: 100 EAVAKGLERLAEICDDTISSFDNCM--VEQHRMAAATQPE 137
[238][TOP]
>UniRef100_A0DTF6 Chromosome undetermined scaffold_63, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0DTF6_PARTE
Length = 122
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQT-NGTKSCEDAMMH 432
GTF F EDHT+GN LR L + F GY +PHP E M +++QT N TK E M
Sbjct: 42 GTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVNETK--EKVMND 99
Query: 433 ALEDLANEYHIMLEEFDQAV 492
L+ L+ I+ ++F QA+
Sbjct: 100 GLKCLSQICDIIEDKFKQAL 119
[239][TOP]
>UniRef100_C5P253 DNA-directed RNA polymerases I and III 16 kDa polypeptide, putative
n=1 Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5P253_COCP7
Length = 145
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT + + + +
Sbjct: 57 AASFQFEGEDHTLGNALRYIIMKNPDVEFCGYTMPHPSETKMNLRIQTYASTNVFEVLDK 116
Query: 433 ALEDLANEYHIMLEEFDQA 489
L DL + ++ E F A
Sbjct: 117 GLSDLIDLCDVVTETFTTA 135
[240][TOP]
>UniRef100_B8P7Q9 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R
RepID=B8P7Q9_POSPM
Length = 89
Score = 55.5 bits (132), Expect = 3e-06
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 235 DTKLKDAGTFTFRSEDHTIGNLLRMQLHA-DKSTVFAGYRIPHPLEPVMVVKVQTNGT 405
DTK+ +A T +DHT+GNL+R D + Y++PHPL+P ++K+QT+GT
Sbjct: 4 DTKIPNAATIKVLKQDHTLGNLIRAYTTVVDAANFVCRYKVPHPLQPHFLIKIQTDGT 61
[241][TOP]
>UniRef100_B6QVD5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6QVD5_PENMQ
Length = 135
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F+ E HT+GN LR + + F GY IPHP E M +++QT + +A+
Sbjct: 43 AASFQFKEEGHTLGNALRYVIMKNPKVEFCGYTIPHPSEAKMNLRIQTYDDTTAIEALEK 102
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L DL + ++ ++F A A
Sbjct: 103 GLNDLMDLCDVVSDKFTVARDA 124
[242][TOP]
>UniRef100_UPI00006D2CA2 PREDICTED: polymerase (RNA) I polypeptide D, 16kDa n=1 Tax=Macaca
mulatta RepID=UPI00006D2CA2
Length = 133
Score = 55.1 bits (131), Expect = 4e-06
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
+ EGERK + A + TF EDHT+GN LR + + F GY HP E
Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77
Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
+ +++QT GT + L +L + +L++F+ ++
Sbjct: 78 SKINLRIQTRGTLPAVEPFQRGLNELMSVCQHVLDKFEASI 118
[243][TOP]
>UniRef100_UPI00004BE302 UPI00004BE302 related cluster n=1 Tax=Canis lupus familiaris
RepID=UPI00004BE302
Length = 133
Score = 55.1 bits (131), Expect = 4e-06
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +1
Query: 199 LPEGERKVKYK---ADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
+ EGERK + A + TF EDHT+GN LR + + F GY HP E
Sbjct: 18 MAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSE 77
Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
+ +++QT G + L +L N +L++F+ ++
Sbjct: 78 SKINLRIQTRGALPAVEPFQRGLNELMNVCQHVLDKFEASI 118
[244][TOP]
>UniRef100_Q4DBQ7 DNA-directed RNA polymerase I/III subunit, putative n=1
Tax=Trypanosoma cruzi RepID=Q4DBQ7_TRYCR
Length = 134
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +1
Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
E+KV+ + T + T F EDHT+GN LR L ++ AGY IPHPLE M++
Sbjct: 30 EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89
Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
VQ+ T +A+ LE LA+ L+ F+ +
Sbjct: 90 HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123
[245][TOP]
>UniRef100_Q4D7H8 DNA-dependent RNA polymerases, putative n=1 Tax=Trypanosoma cruzi
RepID=Q4D7H8_TRYCR
Length = 134
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +1
Query: 211 ERKVKYKAD--TKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVV 384
E+KV+ + T + T F EDHT+GN LR L ++ AGY IPHPLE M++
Sbjct: 30 EQKVQIELQRLTDSESTVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLL 89
Query: 385 KVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAV 492
VQ+ T +A+ LE LA+ L+ F+ +
Sbjct: 90 HVQS--TDYAVEAVAEGLERLASICDETLQSFEDCM 123
[246][TOP]
>UniRef100_A8QGH1 Probable DNA-directed RNA polymerases I/III 16 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8QGH1_BRUMA
Length = 113
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = +1
Query: 199 LPEGERKVKY-KADTKLKDAGTFT--FRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLE 369
L + ERKV+ D+ D T EDHTIGN L+ L + F GY +PHPLE
Sbjct: 4 LLDSERKVEILDVDSFRSDPSNLTVILYEEDHTIGNSLKHVLCKMRDVEFCGYNVPHPLE 63
Query: 370 PVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQA 489
+++++QT S +M E+L + + ++FD +
Sbjct: 64 DKILIRLQTKRGVSAASMLMKGFEELECIFASIRQKFDSS 103
[247][TOP]
>UniRef100_C5FRW4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
Tax=Microsporum canis CBS 113480 RepID=C5FRW4_NANOT
Length = 144
Score = 55.1 bits (131), Expect = 4e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 244 LKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDA 423
++ A +F F EDHT+GN LR + + F GY +PHP E M +++QT + +
Sbjct: 52 VETAASFQFEGEDHTLGNALRYVIMKNPDVEFCGYTMPHPSEAKMNLRIQTYDSTNVFTV 111
Query: 424 MMHALEDLANEYHIMLEEF 480
+ L DL + ++ E+F
Sbjct: 112 LEKGLSDLMDLCDVVTEKF 130
[248][TOP]
>UniRef100_C4R752 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115
RepID=C4R752_PICPG
Length = 136
Score = 55.1 bits (131), Expect = 4e-06
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F EDHT+GN LR + + + GY IPHP E + +++QT G + +A+
Sbjct: 47 AASFQILDEDHTLGNSLRYIIIKNPEVEYCGYSIPHPSEAKLNIRIQTYGGMTAVEALRK 106
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
L+DL + + ++F ++A
Sbjct: 107 GLDDLVDICDHVEKKFSDVIAA 128
[249][TOP]
>UniRef100_C4JP01 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JP01_UNCRE
Length = 145
Score = 55.1 bits (131), Expect = 4e-06
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT + + +
Sbjct: 57 AASFQFEKEDHTLGNALRYVIMKNPGVEFCGYTMPHPSEERMNLRIQTYSPANVFEVLDK 116
Query: 433 ALEDLANEYHIMLEEFDQA 489
DL + ++LE F A
Sbjct: 117 GFSDLMDLCDVVLETFTAA 135
[250][TOP]
>UniRef100_C0SH10 Predicted protein n=1 Tax=Paracoccidioides brasiliensis Pb03
RepID=C0SH10_PARBP
Length = 201
Score = 55.1 bits (131), Expect = 4e-06
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 253 AGTFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMH 432
A +F F EDHT+GN LR + + F GY +PHP E M +++QT T + +
Sbjct: 113 AVSFQFDREDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTTAIAVLEK 172
Query: 433 ALEDLANEYHIMLEEFDQAVSA 498
+DL ++ E F +A +A
Sbjct: 173 GFDDLMELCDVVTETFTEAKNA 194