AV387479 ( CM016b05_r )

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[1][TOP]
>UniRef100_Q9FVE3 Chlorophyll A-B binding protein of LHCI n=1 Tax=Chlamydomonas
           reinhardtii RepID=Q9FVE3_CHLRE
          Length = 239

 Score =  150 bits (380), Expect = 3e-35
 Identities = 79/93 (84%), Positives = 82/93 (88%)
 Frame = +2

Query: 38  MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 217
           MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD
Sbjct: 1   MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 60

Query: 218 PXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           P  L  +EPAS +  +  SEVIHGRW  MLGVA
Sbjct: 61  PLSL-GKEPASLKRFT-ESEVIHGRWA-MLGVA 90

[2][TOP]
>UniRef100_Q05093 Light harvesting complex I protein n=2 Tax=Chlamydomonas
           reinhardtii RepID=Q05093_CHLRE
          Length = 228

 Score =  150 bits (380), Expect = 3e-35
 Identities = 79/93 (84%), Positives = 82/93 (88%)
 Frame = +2

Query: 38  MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 217
           MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD
Sbjct: 1   MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 60

Query: 218 PXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           P  L  +EPAS +  +  SEVIHGRW  MLGVA
Sbjct: 61  PLSL-GKEPASLKRFT-ESEVIHGRWA-MLGVA 90

[3][TOP]
>UniRef100_A8J249 Light-harvesting protein of photosystem I n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J249_CHLRE
          Length = 239

 Score =  150 bits (380), Expect = 3e-35
 Identities = 79/93 (84%), Positives = 82/93 (88%)
 Frame = +2

Query: 38  MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 217
           MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD
Sbjct: 1   MALSMRTLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFD 60

Query: 218 PXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           P  L  +EPAS +  +  SEVIHGRW  MLGVA
Sbjct: 61  PLSL-GKEPASLKRFT-ESEVIHGRWA-MLGVA 90

[4][TOP]
>UniRef100_A2SY42 Light-harvesting chlorophyll-a/b binding protein Lhca6 (Fragment)
           n=1 Tax=Chlamydomonas incerta RepID=A2SY42_CHLIN
          Length = 192

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 41/57 (71%), Positives = 46/57 (80%)
 Frame = +2

Query: 146 GNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           GNWLPGSDAPAWLP+DLPGNYGFDP  L  ++PAS +  +  SEVIHGRW  MLGVA
Sbjct: 1   GNWLPGSDAPAWLPEDLPGNYGFDPLSL-GKDPASLKRFT-ESEVIHGRWA-MLGVA 54

[5][TOP]
>UniRef100_Q9S8T9 Photosystem I light-harvesting complex chlorophyll A/B protein,
           P22.1/P22 (Fragment) n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q9S8T9_CHLRE
          Length = 38

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 32/37 (86%), Positives = 32/37 (86%)
 Frame = +2

Query: 140 KAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPAS 250
           KAGNWLPGSDAPAWLPDDLPGNYGFDP  L   EPAS
Sbjct: 1   KAGNWLPGSDAPAWLPDDLPGNYGFDPLSL-GDEPAS 36

[6][TOP]
>UniRef100_A4QPP3 Chloroplast light-harvesting complex I protein Lhca1 (Fragment) n=1
           Tax=Micromonas sp. CCMP490 RepID=A4QPP3_9CHLO
          Length = 223

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
 Frame = +2

Query: 56  TLSARTAAPRG-FSGRRVAA-VSNGS--RVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPX 223
           T+SA   A  G F+GR++A   +NG+  +V+ +A  W+PGS  PA L   LP +YGFDP 
Sbjct: 5   TISAPIVARAGSFAGRKLATNATNGTVGKVSARAV-WMPGSTPPAHLTGTLPCDYGFDPL 63

Query: 224 CLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
            L  +EPA+  A    +E+IH RW  MLGVA
Sbjct: 64  GL-GKEPANL-ARFQEAEIIHSRWA-MLGVA 91

[7][TOP]
>UniRef100_C1FD84 Chlorophyll a/b-binding protein, psi-associated, chloroplast n=1
           Tax=Micromonas sp. RCC299 RepID=C1FD84_9CHLO
          Length = 227

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = +2

Query: 89  FSGRRVAA-VSNG-SRVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAA 262
           F+GRR+A   +NG S+V+M+A  W+PGS  P++L   +P +YGFDP  L  +EP +  A 
Sbjct: 17  FAGRRLATQTTNGTSKVSMRA-TWMPGSAPPSYLDGSMPCDYGFDPLGL-GKEPDNL-AR 73

Query: 263 SPRSEVIHGRWGPMLGVA 316
              +E+IH RW  MLGV+
Sbjct: 74  FQEAELIHARWA-MLGVS 90

[8][TOP]
>UniRef100_Q69P91 Os09g0439500 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q69P91_ORYSJ
          Length = 264

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
 Frame = +2

Query: 23  KPPIKMALSMRTLSARTAAPRGFSGRRVAAVSNG-SRVTMKAGN----WLPGSDAPAWLP 187
           +P ++ AL   TL ++ AA    +G R  A   G S V    G     W PGS  P WL 
Sbjct: 14  QPRVRAALRAPTLPSQNAAVARMAGHRAGATKGGVSAVCEPLGPDRPLWFPGSSPPPWLD 73

Query: 188 DDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
             LPG++GFDP  L +        A  ++E++H RW  ML VA
Sbjct: 74  GSLPGDFGFDPLGLGSDPELLRWFA--QAELMHSRWA-MLAVA 113

[9][TOP]
>UniRef100_B1PDK1 Chloroplast chlorophyll a/b binding protein n=1 Tax=Capsicum annuum
           RepID=B1PDK1_CAPAN
          Length = 250

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +2

Query: 41  ALSMRTLSARTAAPRGFSGR-------RVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLP 199
           A   R  + RT    G SG+       R +  +N  +V  K G WLPG  +PA+L   LP
Sbjct: 10  AAIFRPCATRTRFLTGSSGKLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLP 69

Query: 200 GNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           G+ GFDP  L A +P + +    ++E+++GRW  MLGVA
Sbjct: 70  GDNGFDPLGL-AEDPENLKWYI-QAELVNGRWA-MLGVA 105

[10][TOP]
>UniRef100_A9RW10 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RW10_PHYPA
          Length = 270

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
 Frame = +2

Query: 2   SLLRTITKPPIKMALSMRTLSARTA--APRGFSGRRVAAVSNGSRVTMKA---GN----- 151
           S +  +  PP    +S    SART+  A R     +V   + G  +T+ A   GN     
Sbjct: 9   SSVAAVAAPPTSKVVS-NVGSARTSFLAGRALRTTQVCGAAKGD-MTVSATLTGNKTDRP 66

Query: 152 -WLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
            WLPGS+AP WL   LPG+YGFDP  L A EP        ++E++H RW  MLG A
Sbjct: 67  LWLPGSEAPKWLDGSLPGDYGFDPLDL-AAEPGRLN-WMVQAELVHCRWA-MLGAA 119

[11][TOP]
>UniRef100_C1EDC9 Chlorophyll a/b-binding protein, psi-associated, chloroplast n=1
           Tax=Micromonas sp. RCC299 RepID=C1EDC9_9CHLO
          Length = 242

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/87 (42%), Positives = 51/87 (58%)
 Frame = +2

Query: 56  TLSARTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWA 235
           T  +RT  PRG + +  A+V  G+ V      WLPGS APA L   LP +YGFDP  L A
Sbjct: 14  TQKSRTVRPRGVASKARASVRVGA-VAAARPTWLPGSPAPAHLDGTLPCDYGFDPLNLGA 72

Query: 236 REPASXEAASPRSEVIHGRWGPMLGVA 316
            +P + +    ++E++H RW  MLG+A
Sbjct: 73  -DPENLK-WFVQAELMHCRWA-MLGLA 96

[12][TOP]
>UniRef100_B8BCF0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8BCF0_ORYSI
          Length = 264

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
 Frame = +2

Query: 23  KPPIKMALSMRTLSARTAAPRGFSGRRVAAVSNG-SRVTMKAGN----WLPGSDAPAWLP 187
           +P ++ AL   TL ++ AA    +G R  A   G S V    G     W PGS  P WL 
Sbjct: 14  QPRVRAALRAPTLPSQNAAVARMAGHRAGATKGGVSAVCEPLGPDRPLWFPGSSPPPWLD 73

Query: 188 DDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
             LPG++GFDP  L +        A  ++E++H RW  ML  A
Sbjct: 74  GSLPGDFGFDPLGLGSDPELLRWFA--QAELMHSRWA-MLAAA 113

[13][TOP]
>UniRef100_B6SZR1 Chlorophyll a-b binding protein 4 n=1 Tax=Zea mays
           RepID=B6SZR1_MAIZE
          Length = 252

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
 Frame = +2

Query: 32  IKMALSMRTLSARTAAPRGFSGRRV-AAVSNGSRVTMKA---GNWLPGSDAPAWLPDDLP 199
           ++ + S+++ S+  AA  G S R    A ++ +R ++KA   G WLPG  +PA+L   LP
Sbjct: 13  LRPSASLKSSSSSAAAFLGHSSRLGRTATASPTRRSLKAEAKGEWLPGLPSPAYLDGSLP 72

Query: 200 GNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           G+ GFDP  L A +P +      ++E+++GRW  MLGVA
Sbjct: 73  GDNGFDPLGL-AEDPENLR-WYVQAELVNGRWA-MLGVA 108

[14][TOP]
>UniRef100_A8HPH1 Chloroplast light-harvesting complex II protein (Fragment) n=1
           Tax=Euglena gracilis RepID=A8HPH1_EUGGR
          Length = 562

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = +2

Query: 140 KAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGV 313
           K   W PG++APAWL  + PG+ GFDP  L A++P    A +  SEV HGRW  MLG+
Sbjct: 359 KRPTWFPGAEAPAWLTGEYPGDRGFDPLGL-AKDPEDF-AKNRDSEVYHGRWA-MLGL 413

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = +2

Query: 140 KAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGV 313
           K   W PG++AP WL  + PG+ GFDP  L A++PA   A    SEV HGRW  MLG+
Sbjct: 150 KRPTWFPGAEAPTWLTGEYPGDRGFDPFGL-AKDPADF-AKFRDSEVFHGRWA-MLGL 204

[15][TOP]
>UniRef100_Q7XAC6 Chlorophyll a /b binding protein n=1 Tax=Beta vulgaris
           RepID=Q7XAC6_BETVU
          Length = 252

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = +2

Query: 116 SNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRW 295
           +N  +V  K G WLPG  +PA+L   LPG+ GFDP  L A +P + +    ++E+++GRW
Sbjct: 44  TNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLAL-AEDPENLK-WFVQAELVNGRW 101

Query: 296 GPMLGVA 316
             MLGVA
Sbjct: 102 A-MLGVA 107

[16][TOP]
>UniRef100_A9TV02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TV02_PHYPA
          Length = 238

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 29/55 (52%), Positives = 35/55 (63%)
 Frame = +2

Query: 152 WLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           WLPGS+AP WL   LPG+YGFDP  L A EP        ++E++H RW  MLG A
Sbjct: 17  WLPGSEAPKWLDGSLPGDYGFDPLDL-AAEPGRLN-WMVQAELVHCRWA-MLGAA 68

[17][TOP]
>UniRef100_A9U5E4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9U5E4_PHYPA
          Length = 278

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
 Frame = +2

Query: 89  FSGR-----RVAAVSNGSRVTMKAGN-------WLPGSDAPAWLPDDLPGNYGFDPXCLW 232
           FSGR     +VAA +NG                W PGS AP WL   LPG++GFDP  L 
Sbjct: 34  FSGRALRMTKVAAYTNGDMTISAVAAPQNERPLWFPGSQAPEWLDGSLPGDFGFDPLGLV 93

Query: 233 AREPASXEAAS----PRSEVIHGRWGPMLGVA 316
            R  A  +  +     ++E++H RW  MLG A
Sbjct: 94  LRTCAGSDPETLKWFVQAELVHCRWA-MLGAA 124

[18][TOP]
>UniRef100_Q1H8L9 Chlorophyll a/b binding protein n=1 Tax=Solanum tuberosum
           RepID=Q1H8L9_SOLTU
          Length = 251

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
 Frame = +2

Query: 41  ALSMRTLSARTAAPRGFSGRRVAAVS---------NGSRVTMKAGNWLPGSDAPAWLPDD 193
           A   R  ++RT    G SG+    VS         N  +V  K G WLPG  +P +L   
Sbjct: 10  AAIFRPCASRTRFLTGSSGKLNREVSFRPSTSSSYNSFKVEAKKGQWLPGLASPDYLDGS 69

Query: 194 LPGNYGFDPXCLWAREPASXEAASPRSEVIHGRWGPMLGVA 316
           LPG+ GFDP  L A +P + +    ++E+++GRW  MLGVA
Sbjct: 70  LPGDNGFDPLGL-AEDPENLKWFI-QAELVNGRWA-MLGVA 107

[19][TOP]
>UniRef100_A5AE63 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5AE63_VITVI
          Length = 244

 Score = 47.4 bits (111), Expect(2) = 9e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = +2

Query: 110 AVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHG 289
           A +  +RVTM A +W+PG   P +L    PG++GFDP  L    P + E     SE+IH 
Sbjct: 35  AAAGSARVTMSA-DWMPGQPRPPYLDGSAPGDFGFDPLRL-GEVPENLERYK-ESELIHC 91

Query: 290 RWGPMLGV 313
           RW  ML V
Sbjct: 92  RWA-MLAV 98

 Score = 25.4 bits (54), Expect(2) = 9e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 51  CAPCLPAPRLLAASRA--AASLPSPTAAA 131
           C     AP LL++S++  A SLP P AAA
Sbjct: 9   CGVAAVAPSLLSSSKSKFATSLPLPNAAA 37

[20][TOP]
>UniRef100_UPI0001984724 PREDICTED: hypothetical protein isoform 2 n=1 Tax=Vitis vinifera
           RepID=UPI0001984724
          Length = 210

 Score = 47.4 bits (111), Expect(2) = 1e-05
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = +2

Query: 110 AVSNGSRVTMKAGNWLPGSDAPAWLPDDLPGNYGFDPXCLWAREPASXEAASPRSEVIHG 289
           A +  +RVTM A +W+PG   P +L    PG++GFDP  L    P + E     SE+IH 
Sbjct: 35  AAAGSARVTMSA-DWMPGQPRPPYLDGSAPGDFGFDPLRL-GEVPENLERYK-ESELIHC 91

Query: 290 RWGPMLGV 313
           RW  ML V
Sbjct: 92  RWA-MLAV 98

 Score = 25.4 bits (54), Expect(2) = 1e-05
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 51  CAPCLPAPRLLAASRA--AASLPSPTAAA 131
           C     AP LL++S++  A SLP P AAA
Sbjct: 9   CGVAAVAPSLLSSSKSKFATSLPLPNAAA 37