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[1][TOP]
>UniRef100_A8IZS5 Glycine-rich RNA-binding protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IZS5_CHLRE
Length = 165
Score = 92.4 bits (228), Expect(2) = 2e-28
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG
Sbjct: 27 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 70
Score = 57.4 bits (137), Expect(2) = 2e-28
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MSTKLYVGNLSWDTRADDLTNLFSKF
Sbjct: 1 MSTKLYVGNLSWDTRADDLTNLFSKF 26
[2][TOP]
>UniRef100_Q8GU29 Glycin-rich RNA binding protein n=1 Tax=Polytomella sp. Pringsheim
198.80 RepID=Q8GU29_9CHLO
Length = 177
Score = 61.2 bits (147), Expect(2) = 1e-13
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
RT G VE+A +A DRE+GRSRGFGFVTL A+ AK A + +G EFMG
Sbjct: 20 RTYFGKFGEVEEASIALDRESGRSRGFGFVTLPADVAKDAIEKTNGAEFMG 70
Score = 38.1 bits (87), Expect(2) = 1e-13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS++LYVGNLSW+ + +DL F KF
Sbjct: 1 MSSRLYVGNLSWNAKEEDLRTYFGKF 26
[3][TOP]
>UniRef100_Q7F2X8 Os01g0916600 protein n=3 Tax=Oryza sativa RepID=Q7F2X8_ORYSJ
Length = 150
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 178 SSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
S G V +A V DRE+GRSRGFGFV+ + AKSA DG E G
Sbjct: 59 SFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEG 105
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 57 SAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
SAG SPA + L MSTKL+VG LSW+T D L F+ F
Sbjct: 21 SAGSSPAMFNAARL--MSTKLFVGGLSWNTNDDSLKEAFTSF 60
[4][TOP]
>UniRef100_UPI0001B4E50B RNA-binding protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653
RepID=UPI0001B4E50B
Length = 86
Score = 50.4 bits (119), Expect(2) = 4e-09
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
A GAV DA V TDR+TGRSRGFGFV + A+ A ++ DG E G
Sbjct: 24 APFGAVMDATVITDRDTGRSRGFGFVEMADMDAEKAMAQLDGQEMNG 70
Score = 33.9 bits (76), Expect(2) = 4e-09
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS +L+VGNLS+ T DDL LF+ F
Sbjct: 1 MSKRLHVGNLSYQTTKDDLEKLFAPF 26
[5][TOP]
>UniRef100_C0P9V8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0P9V8_MAIZE
Length = 184
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R +S G V +A V TDRETGRSRGFGFV +++AAK A S DG E G
Sbjct: 54 REAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDG 105
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 54 LSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
++ G SPA + L MSTKL++G L W L FS F
Sbjct: 20 ITGGSSPAVFNAARL--MSTKLFIGGLDWGVDDVKLREAFSSF 60
[6][TOP]
>UniRef100_Q9SVM8 Glycine-rich RNA-binding protein 2, mitochondrial n=1
Tax=Arabidopsis thaliana RepID=GRP2_ARATH
Length = 158
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A G V DA V DRETGRSRGFGFV + AA +A SE DG E G
Sbjct: 52 RDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNG 103
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 42 RRLFLSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
R+ S G P S L MSTKL++G LSW T L + F+ F
Sbjct: 12 RQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
[7][TOP]
>UniRef100_B6SIF0 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6SIF0_MAIZE
Length = 156
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R +S G V +A V TDRETGRSRGFGFV +++AAK A S DG E G
Sbjct: 54 REAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDG 105
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 54 LSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
++ G SPA + L MSTKL++G L W L FS F
Sbjct: 20 ITGGSSPAVFNAARL--MSTKLFIGGLDWGVDDVKLREAFSSF 60
[8][TOP]
>UniRef100_B6TUC4 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6TUC4_MAIZE
Length = 153
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R +S G V +A V TDRETGRSRGFGFV +++AAK A S DG E G
Sbjct: 54 REAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDG 105
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 54 LSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
++ G SPA + L MSTKL++G L W L FS F
Sbjct: 20 ITGGSSPAVFNAARL--MSTKLFIGGLDWGVDDVKLREAFSSF 60
[9][TOP]
>UniRef100_Q3EA40 Putative uncharacterized protein At4g13850.2 n=1 Tax=Arabidopsis
thaliana RepID=Q3EA40_ARATH
Length = 153
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A G V DA V DRETGRSRGFGFV + AA +A SE DG E G
Sbjct: 52 RDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNG 103
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 42 RRLFLSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
R+ S G P S L MSTKL++G LSW T L + F+ F
Sbjct: 12 RQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
[10][TOP]
>UniRef100_A8MSB9 Uncharacterized protein At4g13850.3 n=1 Tax=Arabidopsis thaliana
RepID=A8MSB9_ARATH
Length = 144
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A G V DA V DRETGRSRGFGFV + AA +A SE DG E G
Sbjct: 52 RDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNG 103
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 42 RRLFLSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
R+ S G P S L MSTKL++G LSW T L + F+ F
Sbjct: 12 RQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
[11][TOP]
>UniRef100_A8MRQ4 Uncharacterized protein At4g13850.4 n=1 Tax=Arabidopsis thaliana
RepID=A8MRQ4_ARATH
Length = 129
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 29/52 (55%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A G V DA V DRETGRSRGFGFV + AA +A SE DG E G
Sbjct: 52 RDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNG 103
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 42 RRLFLSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
R+ S G P S L MSTKL++G LSW T L + F+ F
Sbjct: 12 RQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHF 58
[12][TOP]
>UniRef100_UPI0001BAFCB9 RNP-1 like RNA-binding protein n=1 Tax=Haliangium ochraceum DSM
14365 RepID=UPI0001BAFCB9
Length = 125
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
GAV +A V TDR+TGRSRGFGFVT E+ A +A E DG E G
Sbjct: 27 GAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEEMDGVELDG 71
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS K++VG LSWDT L F +F
Sbjct: 1 MSNKIFVGGLSWDTDDSSLRAAFERF 26
[13][TOP]
>UniRef100_A6GJJ1 Probable nucleic acid-binding protein n=1 Tax=Plesiocystis pacifica
SIR-1 RepID=A6GJJ1_9DELT
Length = 155
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A GAV DA + TDR+TG SRGFGFVT+ A A E GTE G
Sbjct: 93 RELFAKVGAVVDAMIVTDRDTGDSRGFGFVTMANRKDATKAMKELGGTELDG 144
Score = 33.5 bits (75), Expect(2) = 3e-08
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSK 179
+L+VG LSWDT +D L LF+K
Sbjct: 77 RLFVGGLSWDTESDSLRELFAK 98
[14][TOP]
>UniRef100_B5KLZ7 Putative glycine-rich RNA-binding protein 2 n=1 Tax=Bambusa
oldhamii RepID=B5KLZ7_BAMOL
Length = 162
Score = 45.8 bits (107), Expect(2) = 4e-08
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 178 SSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
S G V +A V TDR+TG+SRGFGFV+ + AK+A S DG E G
Sbjct: 59 SFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEG 105
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 57 SAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
S G +PA + L MSTKL+VG LSW T L + F+ F
Sbjct: 21 STGSTPAMFNAARL--MSTKLFVGGLSWGTDDQSLKDAFTSF 60
[15][TOP]
>UniRef100_Q5K255 Putative 29 kDa ribonucleoprotein A (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K255_GUITH
Length = 170
Score = 40.8 bits (94), Expect(2) = 5e-08
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 81 SGSLPLGTMS-TKLYVGNLSWDTRADDLTNLFSKF 182
SG P G TKLYVGNLS+DTR +DL FS+F
Sbjct: 34 SGDRPAGADGGTKLYVGNLSFDTRGEDLMQYFSQF 68
Score = 39.7 bits (91), Expect(2) = 5e-08
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 184 GAVEDAFVATDRET-GRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
G V+D V DR+ GRSRGFGFVT A A+ A S+ D E+MG
Sbjct: 69 GKVDDTTVIMDRDDPGRSRGFGFVTYSTIADAEYAISKTDNVEWMG 114
[16][TOP]
>UniRef100_C6KF85 Putative glycine-rich RNA-binding protein n=1 Tax=Tamarix hispida
RepID=C6KF85_9CARY
Length = 143
Score = 51.6 bits (122), Expect(2) = 7e-08
Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEAN-AAKSACSECDGTEFMG 315
+S G V DA V TDRETGRSRGFGFV N AA SA S DG E G
Sbjct: 56 SSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNG 103
Score = 28.5 bits (62), Expect(2) = 7e-08
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKF 182
S++L+VG LSW T L + FS F
Sbjct: 34 SSRLFVGGLSWGTDDQSLKDAFSSF 58
[17][TOP]
>UniRef100_Q314Q2 RNA-binding region RNP-1 n=1 Tax=Desulfovibrio desulfuricans subsp.
desulfuricans str. G20 RepID=Q314Q2_DESDG
Length = 87
Score = 48.9 bits (115), Expect(2) = 7e-08
Identities = 24/47 (51%), Positives = 29/47 (61%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
A G V A V +DRETGRSRGFGFV ++AN A A + + F G
Sbjct: 24 ADFGDVTSARVISDRETGRSRGFGFVEMDANGAAQAIDSLNASSFQG 70
Score = 31.2 bits (69), Expect(2) = 7e-08
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M+ +YVGNLSW+ DL LF+ F
Sbjct: 1 MTKNIYVGNLSWECTDQDLHALFADF 26
[18][TOP]
>UniRef100_Q57014 Putative RNA-binding protein rbpA n=1 Tax=Synechocystis sp. PCC
6803 RepID=RBPA_SYNY3
Length = 101
Score = 50.8 bits (120), Expect(2) = 1e-07
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G+V+ + TDRETGR RGFGFV LEA+A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMG 69
Score = 28.5 bits (62), Expect(2) = 1e-07
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D DLT +F+++
Sbjct: 3 IYVGNLSYDVSEADLTAVFAEY 24
[19][TOP]
>UniRef100_B8CAB9 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CAB9_THAPS
Length = 77
Score = 51.6 bits (122), Expect(2) = 1e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V D F+ TDR++GR RGF FVT+ A A++ACS+ +G E G
Sbjct: 23 GQVTDCFLPTDRDSGRVRGFAFVTMPAKEAETACSKTNGAELDG 66
Score = 27.7 bits (60), Expect(2) = 1e-07
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKFWRRRGC 200
LYVGNLS++T + + LF ++ + C
Sbjct: 1 LYVGNLSFETTEESVRGLFEQYGQVTDC 28
[20][TOP]
>UniRef100_A9TLQ5 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TLQ5_PHYPA
Length = 194
Score = 47.0 bits (110), Expect(2) = 1e-07
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFMG 315
G+V DA V DR+TG+SRGFGFVT+ A+ +A DG EF G
Sbjct: 138 GSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEFEG 182
Score = 32.0 bits (71), Expect(2) = 1e-07
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 72 PAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
P GS + + K+++GNLSW AD L +FS++
Sbjct: 101 PPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEY 137
[21][TOP]
>UniRef100_C0A5M9 RNP-1 like RNA-binding protein n=1 Tax=Opitutaceae bacterium TAV2
RepID=C0A5M9_9BACT
Length = 106
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFMG 315
RT ++ G + D F+ATDRETGR RGF FVT + A ++ A + +GT+ G
Sbjct: 20 RTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKLNGTDLGG 71
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
M++KLYVGNLS++T DL FS
Sbjct: 1 MNSKLYVGNLSFNTSEADLRTAFS 24
[22][TOP]
>UniRef100_Q3MH83 RNA-binding region RNP-1 n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MH83_ANAVT
Length = 99
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
G+V + TDRETGR RGFGFV +E++AA+ A + DG E+MG
Sbjct: 25 GSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALDGAEWMG 69
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+ DDLT +FS++
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEY 24
[23][TOP]
>UniRef100_Q9WX37 Putative RNA-binding protein rbpE n=2 Tax=Nostocaceae
RepID=RBPE_ANASP
Length = 99
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
G+V + TDRETGR RGFGFV +E++AA+ A + DG E+MG
Sbjct: 25 GSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALDGAEWMG 69
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+ DDLT +FS++
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEY 24
[24][TOP]
>UniRef100_C4XTZ5 RNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1
RepID=C4XTZ5_DESMR
Length = 94
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
RT ++ G V + TDRETGR RGFGFV ++ A++A + DG +F G
Sbjct: 20 RTQFSNYGEVISVNLITDRETGRLRGFGFVEMDDEGARAAIAGMDGQDFGG 70
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS KLYVGNLS+++ DD+ FS +
Sbjct: 1 MSKKLYVGNLSFNSTEDDIRTQFSNY 26
[25][TOP]
>UniRef100_C7LNV4 RNP-1 like RNA-binding protein n=1 Tax=Desulfomicrobium baculatum
DSM 4028 RepID=C7LNV4_DESBD
Length = 91
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V A V DRETGRSRGFGFV ++ A+ + +GT+ G
Sbjct: 27 GQVSSAHVIEDRETGRSRGFGFVEMDDEGARKSIQALNGTDCQG 70
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS +YVGNLSW T DL +FS++
Sbjct: 1 MSKNIYVGNLSWSTTDADLHAMFSQY 26
[26][TOP]
>UniRef100_C3Y7T8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Y7T8_BRAFL
Length = 183
Score = 45.8 bits (107), Expect(2) = 3e-07
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTE 306
G + D V TDRETGRSRGFGFVT ++ + +C DGTE
Sbjct: 32 GEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKCMDGTE 73
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSKFWRRRGC 200
KL+VG LSWDT ++ L + FS++ C
Sbjct: 9 KLFVGGLSWDTTSEGLESTFSEYGEITDC 37
[27][TOP]
>UniRef100_A9P9S1 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9P9S1_POPTR
Length = 131
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
G V +A V TDR+TGRSRGFGFV+ E+ +A A S DG E G
Sbjct: 60 GEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGG 104
Score = 32.0 bits (71), Expect(2) = 3e-07
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Frame = +3
Query: 66 QSPAYSGSLPLGTM--------STKLYVGNLSWDTRADDLTNLFSKF 182
QS + +G +P+ +M S+KL++G L+W T L + FS F
Sbjct: 13 QSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGF 59
[28][TOP]
>UniRef100_B2RIJ2 RNA-binding protein n=2 Tax=Porphyromonas gingivalis
RepID=B2RIJ2_PORG3
Length = 97
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFMG 315
GAV A V TDRETGRSRGFGFV +E N A+ A E EF G
Sbjct: 27 GAVTSARVITDRETGRSRGFGFVEMEDENDARRAIEELFDQEFQG 71
Score = 30.4 bits (67), Expect(2) = 3e-07
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS +YVGNL++ R +DLT L ++
Sbjct: 1 MSMNIYVGNLNYRVREEDLTGLLQQY 26
[29][TOP]
>UniRef100_A5D413 Putative uncharacterized protein n=1 Tax=Pelotomaculum
thermopropionicum SI RepID=A5D413_PELTS
Length = 84
Score = 44.3 bits (103), Expect(2) = 3e-07
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
++ G V + V TDRETGRSRGFGFV + A + +GTEF G
Sbjct: 24 SAHGEVLSSRVITDRETGRSRGFGFVEVRDEDADIMIAAMNGTEFNG 70
Score = 33.9 bits (76), Expect(2) = 3e-07
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
M+ LYVGNL W T+A+DL + FS
Sbjct: 1 MARTLYVGNLPWATKAEDLADAFS 24
[30][TOP]
>UniRef100_B0D8X8 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D8X8_LACBS
Length = 154
Score = 40.4 bits (93), Expect(2) = 4e-07
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +1
Query: 157 T*RTCSASSGAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSE 291
T R + G V D+ V DR+TGRSRGFGFVT EA+AA +E
Sbjct: 18 TLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGGLNE 66
Score = 37.0 bits (84), Expect(2) = 4e-07
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS K+YVGNLSW+T D L FS+F
Sbjct: 1 MSAKVYVGNLSWNTTDDTLRQAFSEF 26
[31][TOP]
>UniRef100_B4VK50 RNA-binding protein n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VK50_9CYAN
Length = 103
Score = 47.0 bits (110), Expect(2) = 4e-07
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G V+ + TDRETGR RGFGFV +++ A +SA + DG E+MG
Sbjct: 22 AEYGTVKRVQLPTDRETGRMRGFGFVEMDSEAEESAAIDALDGAEWMG 69
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+Y+GNLS+D +D+T++F+++
Sbjct: 3 IYIGNLSYDATEEDITSIFAEY 24
[32][TOP]
>UniRef100_C0GM59 RNP-1 like RNA-binding protein n=1 Tax=Desulfonatronospira
thiodismutans ASO3-1 RepID=C0GM59_9DELT
Length = 84
Score = 47.4 bits (111), Expect(2) = 4e-07
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
R A G V A + DRETGRSRGFGFV +E N A A +GT+F G
Sbjct: 19 RDLFAEYGEVSSAKIIEDRETGRSRGFGFVEME-NGADEAIESLNGTDFGG 68
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
T LYVGNL W T L +LF+++
Sbjct: 2 TNLYVGNLPWSTTEAQLRDLFAEY 25
[33][TOP]
>UniRef100_A6DDX9 Putative uncharacterized protein n=1 Tax=Caminibacter
mediatlanticus TB-2 RepID=A6DDX9_9PROT
Length = 83
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V A + DRETGRS+GFGF+ +E + A++A E DG EF+G
Sbjct: 26 GEVLSAKIINDRETGRSKGFGFIEME-SGAETAIEELDGKEFLG 68
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGN+++D A++L LFS++
Sbjct: 4 IYVGNINYDANAEELKELFSQY 25
[34][TOP]
>UniRef100_B4VK73 RNA-binding protein, putative n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VK73_9CYAN
Length = 95
Score = 47.4 bits (111), Expect(2) = 6e-07
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A GAV+ + TDRETGR RGFGFV +E + ++A E DG E+MG
Sbjct: 22 ADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIEALDGAEWMG 69
Score = 29.6 bits (65), Expect(2) = 6e-07
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D A+DL+ +F+ +
Sbjct: 3 IYVGNLSYDVTAEDLSAVFADY 24
[35][TOP]
>UniRef100_C7LNN6 RNP-1 like RNA-binding protein n=1 Tax=Desulfomicrobium baculatum
DSM 4028 RepID=C7LNN6_DESBD
Length = 85
Score = 44.7 bits (104), Expect(2) = 6e-07
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V A V DR TGRSRGFGFV ++ A+ A +GT+ G
Sbjct: 25 GEVTSAHVIEDRATGRSRGFGFVEMDDEGARKAIQAVNGTDLQG 68
Score = 32.3 bits (72), Expect(2) = 6e-07
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLSW T DL +LFS++
Sbjct: 3 IYVGNLSWSTTDADLKSLFSQY 24
[36][TOP]
>UniRef100_C0GWF0 RNP-1 like RNA-binding protein n=1 Tax=Desulfonatronospira
thiodismutans ASO3-1 RepID=C0GWF0_9DELT
Length = 84
Score = 45.4 bits (106), Expect(2) = 6e-07
Identities = 25/51 (49%), Positives = 30/51 (58%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
R A G V A + DRETGRSRGFGFV +E N A A + +G +F G
Sbjct: 19 RDSFAEFGEVSSAKIIEDRETGRSRGFGFVEME-NGADEAVEKLNGKDFDG 68
Score = 31.6 bits (70), Expect(2) = 6e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
T LYVGNLSW+T L + F++F
Sbjct: 2 TNLYVGNLSWNTTETQLRDSFAEF 25
[37][TOP]
>UniRef100_Q9LIS2 Glycine-rich RNA binding protein-like n=1 Tax=Arabidopsis thaliana
RepID=Q9LIS2_ARATH
Length = 136
Score = 46.6 bits (109), Expect(2) = 7e-07
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 178 SSGAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
S G V +A V DRETGRSRGFGFV+ ++A +A E DG E G
Sbjct: 57 SFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNG 103
Score = 30.0 bits (66), Expect(2) = 7e-07
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS+KL+VG LSW T L F+ F
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSF 58
[38][TOP]
>UniRef100_Q8LDS0 Glycine-rich RNA binding protein, putative n=1 Tax=Arabidopsis
thaliana RepID=Q8LDS0_ARATH
Length = 136
Score = 46.6 bits (109), Expect(2) = 7e-07
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 178 SSGAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
S G V +A V DRETGRSRGFGFV+ ++A +A E DG E G
Sbjct: 57 SFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNG 103
Score = 30.0 bits (66), Expect(2) = 7e-07
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS+KL+VG LSW T L F+ F
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSF 58
[39][TOP]
>UniRef100_Q4PBV1 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PBV1_USTMA
Length = 192
Score = 41.2 bits (95), Expect(2) = 9e-07
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSE 291
G + D V DRETGRSRGFGFVT EA+AA +A +E
Sbjct: 27 GQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAALNE 66
Score = 35.0 bits (79), Expect(2) = 9e-07
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M+ K+YVGNLSW+T D L + FS +
Sbjct: 1 MAAKVYVGNLSWNTTDDSLAHAFSTY 26
[40][TOP]
>UniRef100_B8N8I7 Heterogeneous nuclear ribonucleoprotein G, putative n=2
Tax=Aspergillus RepID=B8N8I7_ASPFN
Length = 125
Score = 42.0 bits (97), Expect(2) = 9e-07
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSA 282
G V DA V DRETGRSRGFGFVT A A
Sbjct: 28 GNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Score = 34.3 bits (77), Expect(2) = 9e-07
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKF 182
S K+YVGNLSW+T + L FS+F
Sbjct: 3 SAKVYVGNLSWNTNDESLRQTFSEF 27
[41][TOP]
>UniRef100_A0LED5 RNP-1 like RNA-binding protein n=1 Tax=Syntrophobacter fumaroxidans
MPOB RepID=A0LED5_SYNFM
Length = 122
Score = 43.1 bits (100), Expect(2) = 9e-07
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
G VE A V DRE+GRSRGFGFV + + A +E +G +F G
Sbjct: 27 GTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAIAELNGKDFNG 71
Score = 33.1 bits (74), Expect(2) = 9e-07
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSK 179
MS KLYVGNLS+ T ++ L LFS+
Sbjct: 1 MSMKLYVGNLSFQTSSEQLRELFSQ 25
[42][TOP]
>UniRef100_C4XL28 RNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1
RepID=C4XL28_DESMR
Length = 99
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
AS G V + TDRETGR RGFGFV ++ A +A DG E G
Sbjct: 24 ASYGEVLSVNLITDRETGRLRGFGFVEMDDAGAAAAIQNLDGKELGG 70
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MS KLYVGNLS+ + DD+ N F+ +
Sbjct: 1 MSKKLYVGNLSFSSTEDDVRNHFASY 26
[43][TOP]
>UniRef100_B0CD27 RNA-binding region n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CD27_ACAM1
Length = 95
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 166 TCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKS-ACSECDGTEFMG 315
T A G V+ A + TDRETGR RGFGFV + +A ++ A E DG E+MG
Sbjct: 19 TVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEELDGAEWMG 69
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D DL +F+++
Sbjct: 3 IYVGNLSYDVTEQDLNTVFAEY 24
[44][TOP]
>UniRef100_B5YBE7 RNA-binding protein n=1 Tax=Dictyoglomus thermophilum H-6-12
RepID=B5YBE7_DICT6
Length = 92
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
AS G V A + +DR TGRS+GFGFV ++ + A+ S + TE G
Sbjct: 24 ASHGTVYSARIISDRNTGRSKGFGFVEVDESEAEKMISALNNTEVKG 70
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
MS LYVGNL W T ++L N+F+
Sbjct: 1 MSKTLYVGNLPWSTTEEELKNIFA 24
[45][TOP]
>UniRef100_B1I5R9 RNP1-like RNA-binding protein n=1 Tax=Candidatus Desulforudis
audaxviator MP104C RepID=B1I5R9_DESAP
Length = 89
Score = 44.7 bits (104), Expect(2) = 1e-06
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V + + TDR+TGRSRGFGFV ++ A++ + +GTEF G
Sbjct: 27 GEVVSSRIITDRQTGRSRGFGFVEVKDEDAETMINALNGTEFGG 70
Score = 31.6 bits (70), Expect(2) = 1e-06
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M LYVGNL W T+A+DL F +
Sbjct: 1 MVRTLYVGNLPWGTKAEDLDEAFGAY 26
[46][TOP]
>UniRef100_B8DNU8 RNP-1 like RNA-binding protein n=1 Tax=Desulfovibrio vulgaris str.
'Miyazaki F' RepID=B8DNU8_DESVM
Length = 88
Score = 47.0 bits (110), Expect(2) = 1e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
R ++ G V+ + DRETGR RGFGFV ++ + A++A DG +F G
Sbjct: 20 RALFSNHGEVQSVALIMDRETGRPRGFGFVEMDDDGARAAMEALDGRDFQG 70
Score = 29.3 bits (64), Expect(2) = 1e-06
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
MS KLYVGNL + + DL LFS
Sbjct: 1 MSKKLYVGNLPFSSSESDLRALFS 24
[47][TOP]
>UniRef100_C1ZIK1 RRM domain-containing RNA-binding protein n=1 Tax=Planctomyces
limnophilus DSM 3776 RepID=C1ZIK1_PLALI
Length = 146
Score = 44.7 bits (104), Expect(2) = 1e-06
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
R + G V A V +DRETGRSRGFGFV + ++ A+ A +G EF G
Sbjct: 20 REAFSEHGTVTRAQVVSDRETGRSRGFGFVEM-SDGAERAVEAMNGAEFQG 69
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSK 179
M+ LYVGNL + T ADDL FS+
Sbjct: 1 MAKNLYVGNLPYGTTADDLREAFSE 25
[48][TOP]
>UniRef100_B8E1S2 RNP-1 like RNA-binding protein n=1 Tax=Dictyoglomus turgidum DSM
6724 RepID=B8E1S2_DICTD
Length = 92
Score = 43.1 bits (100), Expect(2) = 1e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
AS G V A + +DR TGRS+GFGFV ++ A+ S + TE G
Sbjct: 24 ASHGTVYSARIISDRNTGRSKGFGFVEVDEKEAEKMISALNNTEVKG 70
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
MS LYVGNL W T ++L N+F+
Sbjct: 1 MSKTLYVGNLPWSTTEEELKNIFA 24
[49][TOP]
>UniRef100_C8W5P0 RNP-1 like RNA-binding protein n=1 Tax=Desulfotomaculum acetoxidans
DSM 771 RepID=C8W5P0_9FIRM
Length = 82
Score = 39.3 bits (90), Expect(2) = 1e-06
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V +A V +DRETGRSRGFGFV + + + +GT+ G
Sbjct: 27 GDVINARVISDRETGRSRGFGFVEVNDEDVEKFIAAMNGTDLGG 70
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M+ LY+GNL W T+A+DL FSK+
Sbjct: 1 MARTLYIGNLPWSTKAEDLEEAFSKY 26
[50][TOP]
>UniRef100_Q8LHN4 Os07g0631900 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q8LHN4_ORYSJ
Length = 264
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V DA V DRE+GRSRGFGFVT A +A S DG + G
Sbjct: 201 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDG 248
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Frame = +3
Query: 36 RGRRLFLSAGQSPAYSGSLPLGTM--------STKLYVGNLSWDTRADDLTNLFSK 179
+GR L +++G P P S KLYVGNL+W L NLFS+
Sbjct: 147 QGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSE 202
[51][TOP]
>UniRef100_A2YNZ1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YNZ1_ORYSI
Length = 259
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V DA V DRE+GRSRGFGFVT A +A S DG + G
Sbjct: 196 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDG 243
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Frame = +3
Query: 36 RGRRLFLSAGQSPAYSGSLPLGTM--------STKLYVGNLSWDTRADDLTNLFSK 179
+GR L +++G P P S KLYVGNL+W L NLFS+
Sbjct: 142 QGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSE 197
[52][TOP]
>UniRef100_A6N1F5 Chloroplast 29 kDa ribonucleoprotein (Fragment) n=1 Tax=Oryza
sativa Indica Group RepID=A6N1F5_ORYSI
Length = 205
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V DA V DRE+GRSRGFGFVT A +A S DG + G
Sbjct: 142 SEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDG 189
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Frame = +3
Query: 36 RGRRLFLSAGQSPAYSGSLPLGTM--------STKLYVGNLSWDTRADDLTNLFSK 179
+GR L +++G P P S KLYVGNL+W L NLFS+
Sbjct: 88 QGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSE 143
[53][TOP]
>UniRef100_C1E5A3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E5A3_9CHLO
Length = 199
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 196 DAFVATDRETGRSRGFGFVTLEANAAKSAC-SECDGTEFMG 315
D V TD TGRSRGFGFVT+ A AC + DG + G
Sbjct: 44 DVTVVTDMNTGRSRGFGFVTVPDQAVADACIAALDGADVDG 84
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 66 QSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
++ A G+ G KLYVGNLSW D L ++F+++
Sbjct: 2 EAAAEDGAAVSGEEGVKLYVGNLSWGVTNDSLADVFNQY 40
[54][TOP]
>UniRef100_Q5KDS6 Glycine-rich RNA binding protein, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KDS6_CRYNE
Length = 182
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSE 291
G V D V DRETGRSRGFGFVT EA AA +A +E
Sbjct: 28 GTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNE 67
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKFWRRRGCL 203
++K+YVGNLSW++ D L +FS + C+
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCI 34
[55][TOP]
>UniRef100_UPI000180C465 PREDICTED: similar to cold-inducible RNA-binding protein n=1
Tax=Ciona intestinalis RepID=UPI000180C465
Length = 167
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
G VE + TDR+TGRSRGF FVT E A +A E +F+G
Sbjct: 29 GEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKEMHEEDFLG 73
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSKF 182
K++VGNLS+D DDLT FS F
Sbjct: 6 KVFVGNLSYDATEDDLTKRFSDF 28
[56][TOP]
>UniRef100_Q5KDS5 Glycine-rich RNA binding protein, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KDS5_CRYNE
Length = 161
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSE 291
G V D V DRETGRSRGFGFVT EA AA +A +E
Sbjct: 28 GTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNE 67
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKFWRRRGCL 203
++K+YVGNLSW++ D L +FS + C+
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCI 34
[57][TOP]
>UniRef100_C5XG78 Putative uncharacterized protein Sb03g043760 n=1 Tax=Sorghum
bicolor RepID=C5XG78_SORBI
Length = 147
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVT-LEANAAKSACSECDGTEFMG 315
R + G V +A V TDR+TG+SRGFGFV ++AA +A S DG E G
Sbjct: 54 REAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDG 105
Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 54 LSAGQSPAYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSKF 182
++A SPA + L MSTKL+VG LSW L FS F
Sbjct: 20 VAASSSPAVFNAARL--MSTKLFVGGLSWGVDDMKLREAFSGF 60
[58][TOP]
>UniRef100_B5W712 RNP-1 like RNA-binding protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5W712_SPIMA
Length = 93
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
A G V+ + + TDRETGRSRGFGFV + + A DG E+MG
Sbjct: 22 AQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEALDGAEWMG 69
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D DDL+ +F+++
Sbjct: 3 IYVGNLSYDVTPDDLSEVFAQY 24
[59][TOP]
>UniRef100_Q67KH3 Glycine-rich RNA-binding protein n=1 Tax=Symbiobacterium
thermophilum RepID=Q67KH3_SYMTH
Length = 86
Score = 45.8 bits (107), Expect(2) = 2e-06
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
G VE+A + TDRETGRSRGFGFV + + AA+ A +E E+ G
Sbjct: 27 GEVENARIITDRETGRSRGFGFVDMADEEAARRAIAELHNYEYGG 71
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M +YVGNL W T +DL LF +
Sbjct: 1 MPFSIYVGNLPWSTTPEDLRALFEPY 26
[60][TOP]
>UniRef100_A3QQP3 Chloroplast single strand DNA binding protein n=1 Tax=Mesostigma
viride RepID=A3QQP3_MESVI
Length = 299
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
G V+ A V DRE+GRSRGF FVT+ + +AA+ A DGTE G
Sbjct: 114 GEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRGLDGTELAG 158
Score = 32.0 bits (71), Expect(2) = 2e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKF 182
STKLYVGNL+W + L FS+F
Sbjct: 89 STKLYVGNLAWSCDDEMLNQAFSQF 113
[61][TOP]
>UniRef100_C5WYM4 Putative uncharacterized protein Sb01g034120 n=1 Tax=Sorghum
bicolor RepID=C5WYM4_SORBI
Length = 262
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V +A + DRE+GRSRGFGFVT A ++A S DG++ G
Sbjct: 198 SEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDG 245
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 39 GRRLFLSAGQSPAYSGSLPLGTM--STKLYVGNLSWDTRADDLTNLFSK 179
GR L +++G P S G + ++YVGNLSW L NLFS+
Sbjct: 151 GRSLRVNSGPPPPRDPSSQRGPRGDANRVYVGNLSWGVDNSALANLFSE 199
[62][TOP]
>UniRef100_UPI0001745B20 RNA-binding region RNP-1 n=1 Tax=Verrucomicrobium spinosum DSM 4136
RepID=UPI0001745B20
Length = 150
Score = 40.0 bits (92), Expect(2) = 2e-06
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
GAV + + TDR+TGR RGF FV ++ A A + +G E+MG
Sbjct: 27 GAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIKGLNGLEWMG 71
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M+TK+YVGNL+W D+ LFS++
Sbjct: 1 MNTKMYVGNLAWSATEQDVRELFSQY 26
[63][TOP]
>UniRef100_A4J7H5 RNP-1-like RNA-binding protein n=1 Tax=Desulfotomaculum reducens
MI-1 RepID=A4J7H5_DESRM
Length = 85
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V + V TDRETGRSRGFGFV + A + +GTE G
Sbjct: 26 GEVLSSRVITDRETGRSRGFGFVEVNDTDADKMIAALNGTELGG 69
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
LYVGNL W T+A+DL + F ++
Sbjct: 4 LYVGNLPWSTKAEDLASAFEQY 25
[64][TOP]
>UniRef100_B7FX33 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FX33_PHATR
Length = 77
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V D F+ TDR++GR RGF FVT+ A A+ AC++ +G E G
Sbjct: 23 GTVSDCFLPTDRDSGRVRGFCFVTMPAKQAEEACAKLNGYELDG 66
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKFWRRRGC 200
LYVGNLS+DT+ + F ++ C
Sbjct: 1 LYVGNLSFDTQEGSVRQAFEQYGTVSDC 28
[65][TOP]
>UniRef100_Q10VQ9 RNA-binding region RNP-1 n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10VQ9_TRIEI
Length = 102
Score = 43.9 bits (102), Expect(2) = 3e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMG 315
A G V+ + TDRETGR RGFGFV + + N + A DG E+MG
Sbjct: 22 AEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEALDGAEWMG 69
Score = 30.8 bits (68), Expect(2) = 3e-06
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D DDL+ +F+++
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEY 24
[66][TOP]
>UniRef100_B1WT34 RNA-binding protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WT34_CYAA5
Length = 98
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
G V+ + TDRETGR RGFGFV +E++ ++A E DG ++MG
Sbjct: 25 GTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIETLDGADWMG 69
Score = 30.4 bits (67), Expect(2) = 3e-06
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNL +D ++DLT +FS++
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEY 24
[67][TOP]
>UniRef100_A3IW49 RNA binding protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IW49_9CHRO
Length = 98
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
G V+ + TDRETGR RGFGFV +E++ ++A E DG ++MG
Sbjct: 25 GTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIETLDGADWMG 69
Score = 30.4 bits (67), Expect(2) = 3e-06
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNL +D ++DLT +FS++
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEY 24
[68][TOP]
>UniRef100_B8FUR6 RNP-1 like RNA-binding protein n=1 Tax=Desulfitobacterium hafniense
DCB-2 RepID=B8FUR6_DESHD
Length = 83
Score = 43.1 bits (100), Expect(2) = 3e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V + + TDRETGRSRGFGFV +E A + +G +F G
Sbjct: 26 GQVISSRIITDRETGRSRGFGFVEVEDEDAARMAEDLNGKDFGG 69
Score = 31.6 bits (70), Expect(2) = 3e-06
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
LYVGNL W+T ++DL + F ++
Sbjct: 4 LYVGNLPWNTTSEDLNSFFGQY 25
[69][TOP]
>UniRef100_Q8W214 Single-stranded DNA binding protein n=1 Tax=Solanum tuberosum
RepID=Q8W214_SOLTU
Length = 289
Score = 41.2 bits (95), Expect(2) = 3e-06
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 166 TCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
T + G V DA V DR++GRSRGFGFVT A A DG + G
Sbjct: 222 TLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGG 272
Score = 33.1 bits (74), Expect(2) = 3e-06
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 57 SAGQSPAYSGSLPLGTM--STKLYVGNLSWDTRADDLTNLFSK 179
S G + +Y G G+M S ++YVGNL+W L LFS+
Sbjct: 184 SFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSE 226
[70][TOP]
>UniRef100_B1ZWV3 RNP-1 like RNA-binding protein n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZWV3_OPITP
Length = 117
Score = 44.7 bits (104), Expect(2) = 3e-06
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R+ G+V D +VA D+ TGR RGF FVT+ A AK+A + +GT+ G
Sbjct: 21 RSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKAAAEKLNGTDLGG 72
Score = 29.6 bits (65), Expect(2) = 3e-06
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKF 182
++KLYVGNLS+ T ++L + F +F
Sbjct: 3 NSKLYVGNLSFKTTEEELRSAFGQF 27
[71][TOP]
>UniRef100_B6HFL4 Pc20g10130 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HFL4_PENCW
Length = 95
Score = 43.5 bits (101), Expect(2) = 4e-06
Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSECD 297
G + D+ V DRETGRSRGFGFVT EA AA +A +E D
Sbjct: 26 GQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAINALNEQD 67
Score = 30.8 bits (68), Expect(2) = 4e-06
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
+K+YVGNLSW T + L F +F
Sbjct: 2 SKIYVGNLSWHTSDESLRQAFGEF 25
[72][TOP]
>UniRef100_C1SGV3 RRM domain-containing RNA-binding protein n=1 Tax=Denitrovibrio
acetiphilus DSM 12809 RepID=C1SGV3_9BACT
Length = 94
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
G V+ A + TDR+TGRS+GFGFV + +A AK+A + +GTEF G
Sbjct: 25 GQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIEQLNGTEFGG 69
Score = 25.0 bits (53), Expect(2) = 4e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLF 173
+YVGNLS+ + D+L LF
Sbjct: 3 IYVGNLSYTSSEDELFELF 21
[73][TOP]
>UniRef100_B0TBV6 RNA binding protein n=1 Tax=Heliobacterium modesticaldum Ice1
RepID=B0TBV6_HELMI
Length = 86
Score = 41.2 bits (95), Expect(2) = 4e-06
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V + + TDRETGRSRGFGFV + A+ +G E+ G
Sbjct: 29 GEVLSSRIITDRETGRSRGFGFVEVRDEDAERMVEAMNGAEYEG 72
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
++ LYVGNL W T+ ++LT LFS +
Sbjct: 3 LTRTLYVGNLPWATKPENLTELFSPY 28
[74][TOP]
>UniRef100_A9SSU3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SSU3_PHYPA
Length = 224
Score = 47.8 bits (112), Expect(2) = 4e-06
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFMG 315
G V DA V DR++GRSRGFGFVT+E A AA +A DG E G
Sbjct: 164 GTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDG 208
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSKF 182
+ KL+VGNLSW L + FS++
Sbjct: 139 ANKLFVGNLSWGCDEAALYSFFSEY 163
[75][TOP]
>UniRef100_Q40437 RGP-3 (Fragment) n=1 Tax=Nicotiana sylvestris RepID=Q40437_NICSY
Length = 144
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A+ G V DA V DR++GRSRGFGFV + A A DG E G
Sbjct: 55 RDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQG 106
Score = 31.6 bits (70), Expect(2) = 4e-06
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MSTKL+VG LSW T L + F+ F
Sbjct: 36 MSTKLFVGGLSWGTDDQSLRDAFATF 61
[76][TOP]
>UniRef100_O23793 RNA binding protein n=1 Tax=Nicotiana sylvestris RepID=O23793_NICSY
Length = 144
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
R A+ G V DA V DR++GRSRGFGFV + A A DG E G
Sbjct: 55 RDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQG 106
Score = 31.6 bits (70), Expect(2) = 4e-06
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
MSTKL+VG LSW T L + F+ F
Sbjct: 36 MSTKLFVGGLSWGTDDQSLRDAFATF 61
[77][TOP]
>UniRef100_Q2UQ21 Predicted protein n=1 Tax=Aspergillus oryzae RepID=Q2UQ21_ASPOR
Length = 127
Score = 48.1 bits (113), Expect(2) = 4e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
GAVE+A V DR+TGRSRGFGFV + A A++A E + EF G
Sbjct: 26 GAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAHEMNNQEFDG 70
Score = 25.8 bits (55), Expect(2) = 4e-06
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
+KL++G L+W T + L + F K+
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKY 25
[78][TOP]
>UniRef100_B8N014 Glycine-rich RNA-binding protein, putative n=1 Tax=Aspergillus
flavus NRRL3357 RepID=B8N014_ASPFN
Length = 127
Score = 48.1 bits (113), Expect(2) = 4e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
GAVE+A V DR+TGRSRGFGFV + A A++A E + EF G
Sbjct: 26 GAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAHEMNNQEFDG 70
Score = 25.8 bits (55), Expect(2) = 4e-06
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
+KL++G L+W T + L + F K+
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKY 25
[79][TOP]
>UniRef100_B8BZY0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8BZY0_THAPS
Length = 77
Score = 43.1 bits (100), Expect(2) = 5e-06
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V D ++ DRETG+ RGF F+T+ + A A E DG E G
Sbjct: 23 GRVIDCYIPVDRETGQHRGFAFITMGPDEALVAADETDGYELDG 66
Score = 30.8 bits (68), Expect(2) = 5e-06
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKFWRRRGC 200
LYVGNLSW T L LF ++ R C
Sbjct: 1 LYVGNLSWGTEEGALRELFEEYGRVIDC 28
[80][TOP]
>UniRef100_B9RW95 RNA binding protein, putative n=1 Tax=Ricinus communis
RepID=B9RW95_RICCO
Length = 267
Score = 39.3 bits (90), Expect(2) = 6e-06
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSAC 285
G + +A V D+ TGRS+G+GFVT EA AA+ AC
Sbjct: 43 GEILEAVVIFDKNTGRSKGYGFVTFKEAEAARRAC 77
Score = 34.3 bits (77), Expect(2) = 6e-06
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 84 GSLPLG-TMSTKLYVGNLSWDTRADDLTNLFSKF 182
GS P G T TK++VG L+W+T + L N F +F
Sbjct: 9 GSGPFGDTTYTKVFVGGLAWETHKETLKNYFQQF 42
[81][TOP]
>UniRef100_B6T531 Ribonucleoprotein A n=1 Tax=Zea mays RepID=B6T531_MAIZE
Length = 264
Score = 41.2 bits (95), Expect(2) = 6e-06
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V +A + DRE+GRSRGFGFVT A ++A S DG + G
Sbjct: 200 SEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDG 247
Score = 32.3 bits (72), Expect(2) = 6e-06
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 39 GRRLFLSAGQSPAYSGSLPLGTM----STKLYVGNLSWDTRADDLTNLFSK 179
GR L +++G P S P + ++YVGNLSW L NLFS+
Sbjct: 151 GRSLRVNSGPPPPRDRSSPSPQRPRGDANRVYVGNLSWGVDNSALANLFSE 201
[82][TOP]
>UniRef100_Q7SGB3 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7SGB3_NEUCR
Length = 200
Score = 48.5 bits (114), Expect(2) = 6e-06
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
GAVE+A V DR+TGRSRGFGFV +A A++A + DG EF G
Sbjct: 26 GAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEFDG 70
Score = 25.0 bits (53), Expect(2) = 6e-06
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSKF 182
KL+VG LSW+T + L F +F
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEF 25
[83][TOP]
>UniRef100_B2IUC2 RNP-1 like RNA-binding protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IUC2_NOSP7
Length = 106
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G V+ V TDRETGR RGF FV + A ++A E DG E+MG
Sbjct: 22 AEYGTVKRVQVPTDRETGRPRGFAFVEMGTEAEETAAIEALDGAEWMG 69
Score = 29.6 bits (65), Expect(2) = 6e-06
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D +DL+ +F+++
Sbjct: 3 IYVGNLSYDVTQEDLSGIFAEY 24
[84][TOP]
>UniRef100_B2IT35 RNP-1 like RNA-binding protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IT35_NOSP7
Length = 100
Score = 45.1 bits (105), Expect(2) = 6e-06
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G V++ + DRETGR RGFGFV +E++A ++A E D E+MG
Sbjct: 22 AEYGTVKNVQLPIDRETGRMRGFGFVEMESDAQETAAIEALDNAEWMG 69
Score = 28.5 bits (62), Expect(2) = 6e-06
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS++ + +DL ++F+++
Sbjct: 3 IYVGNLSYEVKEEDLRHVFAEY 24
[85][TOP]
>UniRef100_B8DSE6 RNP-1 like RNA-binding protein n=1 Tax=Desulfovibrio vulgaris str.
'Miyazaki F' RepID=B8DSE6_DESVM
Length = 88
Score = 44.3 bits (103), Expect(2) = 6e-06
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSECDGTEFMG 315
G V + TDRETGR+RGFGFV ++ AA +A D T F G
Sbjct: 27 GTVLSVKLVTDRETGRARGFGFVEMDDAAAAAAIEALDNTPFGG 70
Score = 29.3 bits (64), Expect(2) = 6e-06
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M+ +YVGNL W D++ +LF+ +
Sbjct: 1 MAKSIYVGNLPWSATEDEVRSLFNTY 26
[86][TOP]
>UniRef100_A5GSX3 RNA-binding protein, RRM domain n=1 Tax=Synechococcus sp. RCC307
RepID=A5GSX3_SYNR3
Length = 84
Score = 39.7 bits (91), Expect(2) = 6e-06
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
A GAV+ + DRETGR RGFGFV + + A + A + E+MG
Sbjct: 22 AEYGAVKKCSLPLDRETGRKRGFGFVDMASEADEQKAIDDLQDVEWMG 69
Score = 33.9 bits (76), Expect(2) = 6e-06
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKFWRRRGC 200
+Y+GNLSWD +DL +LF+++ + C
Sbjct: 3 IYIGNLSWDCEQEDLHSLFAEYGAVKKC 30
[87][TOP]
>UniRef100_B4G1V3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4G1V3_MAIZE
Length = 163
Score = 41.2 bits (95), Expect(2) = 7e-06
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V DA V DR++GRSRGFGFVT A +A S DG + G
Sbjct: 100 SEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDG 147
Score = 32.0 bits (71), Expect(2) = 7e-06
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 14/62 (22%)
Frame = +3
Query: 36 RGRRLFLSAGQSPAYSGSLPLGTMS--------------TKLYVGNLSWDTRADDLTNLF 173
+GR L ++ G P GS P K+YVGNL+W L NLF
Sbjct: 40 QGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLF 99
Query: 174 SK 179
S+
Sbjct: 100 SE 101
[88][TOP]
>UniRef100_UPI000023F4FE hypothetical protein FG11064.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F4FE
Length = 127
Score = 39.7 bits (91), Expect(2) = 7e-06
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +1
Query: 157 T*RTCSASSGAVEDAFVATDRETGRSRGFGFVTL----EANAAKSACSE 291
T R + G V D+ + DR+TGR+RGFGFVT +A AA A +E
Sbjct: 17 TLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDALNE 65
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 111 TKLYVGNLSWDTRADDLTNLFSKF 182
+KLYVGNLSW+T + L FS+F
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEF 25
[89][TOP]
>UniRef100_Q9WX39 Putative RNA-binding protein rbpF n=2 Tax=Nostocaceae
RepID=RBPF_ANASP
Length = 105
Score = 43.9 bits (102), Expect(2) = 8e-06
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
A G+V+ + TDRETGR RGF FV + ++A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGLDGAEWMG 69
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS++ +D++N+F+++
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEY 24
[90][TOP]
>UniRef100_Q3M8E6 RNA-binding region RNP-1 n=2 Tax=Nostocaceae RepID=Q3M8E6_ANAVT
Length = 103
Score = 46.2 bits (108), Expect(2) = 8e-06
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G+V+ + TDRETGR RGFGFV + ++A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEALDGAEWMG 69
Score = 26.9 bits (58), Expect(2) = 8e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D D L +F+++
Sbjct: 3 VYVGNLSYDVTEDSLNAVFAEY 24
[91][TOP]
>UniRef100_Q9WX40 RNA-binding protein n=1 Tax=Anabaena variabilis RepID=Q9WX40_ANAVA
Length = 103
Score = 46.2 bits (108), Expect(2) = 8e-06
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G+V+ + TDRETGR RGFGFV + ++A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEALDGAEWMG 69
Score = 26.9 bits (58), Expect(2) = 8e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D D L +F+++
Sbjct: 3 VYVGNLSYDVTEDSLNPVFAEY 24
[92][TOP]
>UniRef100_Q08374 RNA-binding protein n=1 Tax=Anabaena sp. RepID=Q08374_9NOST
Length = 103
Score = 46.2 bits (108), Expect(2) = 8e-06
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G+V+ + TDRETGR RGFGFV + ++A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEALDGAEWMG 69
Score = 26.9 bits (58), Expect(2) = 8e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+D D L +F+++
Sbjct: 3 VYVGNLSYDVTEDSLNAVFAEY 24
[93][TOP]
>UniRef100_Q3MGY2 RNA-binding region RNP-1 n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MGY2_ANAVT
Length = 103
Score = 43.9 bits (102), Expect(2) = 8e-06
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
A G+V+ + TDRETGR RGF FV + ++A ++A E DG E+MG
Sbjct: 22 AEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGLDGAEWMG 69
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS++ +D++N+F+++
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEY 24
[94][TOP]
>UniRef100_B9XF54 RNP-1 like RNA-binding protein n=1 Tax=bacterium Ellin514
RepID=B9XF54_9BACT
Length = 103
Score = 39.7 bits (91), Expect(2) = 8e-06
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
++ G V + + D+ TGR+RGFGFVT+ A A++A ++ +G E+ G
Sbjct: 24 SAHGPVNEVNLIMDKMTGRARGFGFVTMATAEGAEAAIADLNGKEWQG 71
Score = 33.5 bits (75), Expect(2) = 8e-06
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
MSTKLYVGNLS+ +D+ +LFS
Sbjct: 1 MSTKLYVGNLSFKATENDIQDLFS 24
[95][TOP]
>UniRef100_A0YL37 RNA-binding region protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YL37_9CYAN
Length = 100
Score = 47.0 bits (110), Expect(2) = 8e-06
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
R+ A G V+ + TDRETGR RGF FV ++A+ + A E DG E+MG
Sbjct: 18 RSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIEKLDGAEWMG 69
Score = 26.2 bits (56), Expect(2) = 8e-06
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+ +DL ++F+++
Sbjct: 3 VYVGNLSYQVTEEDLRSVFAEY 24
[96][TOP]
>UniRef100_C5XZX2 Putative uncharacterized protein Sb04g030020 n=1 Tax=Sorghum
bicolor RepID=C5XZX2_SORBI
Length = 295
Score = 41.6 bits (96), Expect(2) = 9e-06
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSE 291
G + +A V TDR +GRS+G+GFVT EA++A+ AC +
Sbjct: 69 GDILEAVVITDRHSGRSKGYGFVTFREADSARKACED 105
Score = 31.2 bits (69), Expect(2) = 9e-06
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 102 TMSTKLYVGNLSWDTRADDLTNLFSKF 182
T TK++VG L+W+T +D L + +F
Sbjct: 42 TTHTKVFVGGLAWETNSDRLRRFYERF 68
[97][TOP]
>UniRef100_C4J5I7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J5I7_MAIZE
Length = 262
Score = 41.2 bits (95), Expect(2) = 9e-06
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+ G V +A + DRE+GRSRGFGFVT A ++A S DG + G
Sbjct: 198 SEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDG 245
Score = 31.6 bits (70), Expect(2) = 9e-06
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +3
Query: 39 GRRLFLSAGQSP-----AYSGSLPLGTMSTKLYVGNLSWDTRADDLTNLFSK 179
GR L +++G P + S P G + ++YVGNLSW L NLFS+
Sbjct: 149 GRSLRVNSGPPPPRDRSSRSPQRPRGD-ANRVYVGNLSWGVDNSALANLFSE 199
[98][TOP]
>UniRef100_Q41367 24 kDa RNA binding protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q41367_SPIOL
Length = 220
Score = 44.7 bits (104), Expect(2) = 9e-06
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+T + +G V +A V DR+TGRSRGFGFVT AN +A DG + G
Sbjct: 152 KTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNG 203
Score = 28.1 bits (61), Expect(2) = 9e-06
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 108 STKLYVGNLSWDTRADDLTNLFSK 179
S +++VGNLSW D L LFS+
Sbjct: 134 SNRVHVGNLSWKVDDDALKTLFSE 157
[99][TOP]
>UniRef100_A9TLQ3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TLQ3_PHYPA
Length = 213
Score = 47.0 bits (110), Expect(2) = 9e-06
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFMG 315
G+V DA + DR++GRSRGFGFVT+E A++A DGTE G
Sbjct: 151 GSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDG 195
Score = 25.8 bits (55), Expect(2) = 9e-06
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSKF 182
KL+VGN+ W +T+LFS +
Sbjct: 128 KLFVGNIPWGCDEAAMTSLFSPY 150
[100][TOP]
>UniRef100_UPI0001969882 hypothetical protein BACCELL_04634 n=1 Tax=Bacteroides
cellulosilyticus DSM 14838 RepID=UPI0001969882
Length = 130
Score = 40.4 bits (93), Expect(2) = 1e-05
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
G V A++ DRETGRSRGFGFV + + A + TEF G
Sbjct: 25 GEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDALNETEFEG 69
Score = 32.3 bits (72), Expect(2) = 1e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YV NLSW+T +D L LFS++
Sbjct: 3 IYVANLSWNTNSDSLQELFSQY 24
[101][TOP]
>UniRef100_B3CDA8 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
DSM 17393 RepID=B3CDA8_9BACE
Length = 128
Score = 40.4 bits (93), Expect(2) = 1e-05
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 GAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
G V A++ DRETGRSRGFGFV + + A + TEF G
Sbjct: 25 GEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDTLNETEFEG 69
Score = 32.3 bits (72), Expect(2) = 1e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YV NLSW+T +D L LFS++
Sbjct: 3 IYVANLSWNTNSDSLQELFSQY 24
[102][TOP]
>UniRef100_A9SSU2 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SSU2_PHYPA
Length = 108
Score = 43.9 bits (102), Expect(2) = 1e-05
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 166 TCSASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSE-CDGTEFMG 315
T + G V +A +AT+R++GRSRGFGFVTL + +A E DG ++ G
Sbjct: 42 TLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIESLDGADYDG 92
Score = 28.9 bits (63), Expect(2) = 1e-05
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 114 KLYVGNLSWDTRADDLTNLFSKFWR 188
KL+VGNLSW + L LFS + R
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGR 49
[103][TOP]
>UniRef100_A0ZEL6 RNA-binding region n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZEL6_NODSP
Length = 106
Score = 46.6 bits (109), Expect(2) = 1e-05
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANAAKSACSEC-DGTEFMG 315
A G V+ V TDRETGR RGF FV +E A ++A E DG E+MG
Sbjct: 22 AEYGTVKRVQVPTDRETGRMRGFAFVEMETEAEEAAAIEALDGAEWMG 69
Score = 26.2 bits (56), Expect(2) = 1e-05
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS++ DL+ +F+++
Sbjct: 3 IYVGNLSYEVTEADLSGVFAEY 24
[104][TOP]
>UniRef100_C1ZJB8 RRM domain-containing RNA-binding protein n=1 Tax=Planctomyces
limnophilus DSM 3776 RepID=C1ZJB8_PLALI
Length = 104
Score = 39.3 bits (90), Expect(2) = 1e-05
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMG 315
+S G V A V DRETGRS+GFGFV ++ +A A + +G + G
Sbjct: 24 SSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAINAMNGKDVNG 71
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFSKF 182
M TKLYVGNL++D L LFS F
Sbjct: 1 MGTKLYVGNLTYDVNNSGLEQLFSSF 26
[105][TOP]
>UniRef100_UPI00017462B4 RNA-binding region RNP-1 n=1 Tax=Verrucomicrobium spinosum DSM 4136
RepID=UPI00017462B4
Length = 100
Score = 37.7 bits (86), Expect(2) = 1e-05
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 163 RTCSASSGAVEDAFVATDRETGRSRGFGFVTLE-ANAAKSACSECDGTEFM 312
R+ ++ G V + + TDR +GR RGF FVT++ A+A + A G E+M
Sbjct: 20 RSLFSAHGEVREVNMPTDRTSGRPRGFAFVTMDSADAMQGAIRALGGKEWM 70
Score = 35.0 bits (79), Expect(2) = 1e-05
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 105 MSTKLYVGNLSWDTRADDLTNLFS 176
M+TK+YVGNL W DD+ +LFS
Sbjct: 1 MNTKMYVGNLPWTATEDDVRSLFS 24
[106][TOP]
>UniRef100_Q8DGQ9 RNA-binding protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DGQ9_THEEB
Length = 94
Score = 47.8 bits (112), Expect(2) = 1e-05
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +1
Query: 175 ASSGAVEDAFVATDRETGRSRGFGFVTLEANA-AKSACSECDGTEFMG 315
A G+V+ ++ DRETGR RGFGFV + ++A ++A ++ DG E+MG
Sbjct: 22 AEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIADLDGAEWMG 69
Score = 25.0 bits (53), Expect(2) = 1e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 117 LYVGNLSWDTRADDLTNLFSKF 182
+YVGNLS+ +DL +F+++
Sbjct: 3 IYVGNLSYTATQEDLEAVFAEY 24