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[1][TOP] >UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE Length = 115 Score = 231 bits (589), Expect = 2e-59 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = +1 Query: 46 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 225 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL Sbjct: 1 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 60 Query: 226 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL Sbjct: 61 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 115 [2][TOP] >UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FIQ5_9CHLO Length = 118 Score = 78.2 bits (191), Expect = 3e-13 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 5/110 (4%) Frame = +1 Query: 76 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 249 VAAKP +R AR A V KAT ++ V KK A+LS L A PA A+VDER+NGD Sbjct: 12 VAAKPAARKVARKAT--VAKATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGD 68 Query: 250 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 390 GTG G+ND +LG++LL + +++ +F QKD G E+ D GL L Sbjct: 69 GTGLILGINDEILGFILLTIPALVFSQFFYAQKDDGIAAGGENDDSGLSL 118 [3][TOP] >UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1 Tax=Spinacia oleracea RepID=PSBW_SPIOL Length = 137 Score = 75.9 bits (185), Expect = 2e-12 Identities = 36/84 (42%), Positives = 55/84 (65%) Frame = +1 Query: 139 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 318 TT + + ++L+ A ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG Sbjct: 56 TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115 Query: 319 MWAIWFIGQKDLGDFEDADDGLKL 390 +WA++F+ L ED + GL L Sbjct: 116 IWALYFVYASGLE--EDEESGLSL 137 [4][TOP] >UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SYI0_SOYBN Length = 132 Score = 74.7 bits (182), Expect = 4e-12 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 11/120 (9%) Frame = +1 Query: 64 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKK----------VAMLSTLPATLAAH 210 RA V +PV S + + + KA VR + +K ++L+ A + Sbjct: 15 RAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMSS 74 Query: 211 PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL L Sbjct: 75 PAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASTLE--EDEESGLSL 132 [5][TOP] >UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=B7FHC2_MEDTR Length = 136 Score = 73.9 bits (180), Expect = 6e-12 Identities = 39/77 (50%), Positives = 53/77 (68%) Frame = +1 Query: 160 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 339 A +A +S ATL++ A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI Sbjct: 64 ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121 Query: 340 GQKDLGDFEDADDGLKL 390 L ED D GL L Sbjct: 122 YASSLD--EDEDSGLSL 136 [6][TOP] >UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T2W3_SOYBN Length = 133 Score = 72.8 bits (177), Expect = 1e-11 Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 12/121 (9%) Frame = +1 Query: 64 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKKVAMLSTL-----------PATLAA 207 R V +PV S + + + KA VR + +K + S L AT+++ Sbjct: 15 RTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMGASLLAAAAAATMSS 74 Query: 208 HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 387 A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL Sbjct: 75 PAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLE--EDEESGLS 132 Query: 388 L 390 L Sbjct: 133 L 133 [7][TOP] >UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SWM3_SOYBN Length = 136 Score = 72.8 bits (177), Expect = 1e-11 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 4/121 (3%) Frame = +1 Query: 40 IKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--- 210 ++ ++L +P + + + G R + ++ K ++V+ + + M ++L A +A Sbjct: 19 VQKRSLGFSSPVLGLPAMGKVG-RVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMS 77 Query: 211 -PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 387 PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L ED + GL Sbjct: 78 GPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLE--EDEESGLS 135 Query: 388 L 390 L Sbjct: 136 L 136 [8][TOP] >UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum bicolor RepID=C5XLL1_SORBI Length = 126 Score = 72.4 bits (176), Expect = 2e-11 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 13/128 (10%) Frame = +1 Query: 46 MQALSARAPR--VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-------- 195 M +SA A VA ++R A + ++ VR AK A +S A Sbjct: 1 MATVSAAAATTVVARAAIARPNALGLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAA 60 Query: 196 ---TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 366 T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ + DL E Sbjct: 61 GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLD--E 118 Query: 367 DADDGLKL 390 D + GL L Sbjct: 119 DEESGLSL 126 [9][TOP] >UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PUM2_VITVI Length = 135 Score = 72.4 bits (176), Expect = 2e-11 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 17/124 (13%) Frame = +1 Query: 70 PRVAAKP----VSRSGARSAVTVVCKATTVRSEVAKK-------------VAMLSTLPAT 198 PRV +P V S A + V+ K V + +K ++++ A Sbjct: 14 PRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKMGMGASLMAAACAA 73 Query: 199 LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADD 378 + PA ALVDERM+ +GTG PFG+++ LGW+L GVFG +WA++F+ L ED + Sbjct: 74 TMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFVYTATLE--EDEES 131 Query: 379 GLKL 390 GL L Sbjct: 132 GLSL 135 [10][TOP] >UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays RepID=B4FUI4_MAIZE Length = 127 Score = 72.0 bits (175), Expect = 2e-11 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%) Frame = +1 Query: 76 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 222 VA ++R A + ++ VR AK A +ST A T +A PA A Sbjct: 13 VARAAIARPNALGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72 Query: 223 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ GL L Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127 [11][TOP] >UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9S4T1_RICCO Length = 132 Score = 71.2 bits (173), Expect = 4e-11 Identities = 33/81 (40%), Positives = 52/81 (64%) Frame = +1 Query: 148 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 327 RS ++++++ + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+ Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113 Query: 328 IWFIGQKDLGDFEDADDGLKL 390 + + L D D D GL L Sbjct: 114 FYTVYTSTLDD--DEDSGLSL 132 [12][TOP] >UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays RepID=B6TM37_MAIZE Length = 127 Score = 71.2 bits (173), Expect = 4e-11 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%) Frame = +1 Query: 76 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 222 VA ++R A + + VR AK A +ST A T +A PA A Sbjct: 13 VARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72 Query: 223 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ GL L Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127 [13][TOP] >UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SEQ6_PHYPA Length = 142 Score = 70.9 bits (172), Expect = 5e-11 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 6/112 (5%) Frame = +1 Query: 73 RVAAKPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDE 234 R AA+PV+ + +VC S ++A T AT+A AHP FALVDE Sbjct: 32 RAAARPVAGVPVLAMPRIVCSLEKKESNKGDVNGLPQLAAAVTSAATMAYAHPVFALVDE 91 Query: 235 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 R++ +GTG GV++P L W+L+GV +WA++F L + +D D GL L Sbjct: 92 RLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGLSL 142 [14][TOP] >UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SZ65_RICCO Length = 134 Score = 70.5 bits (171), Expect = 7e-11 Identities = 39/80 (48%), Positives = 52/80 (65%) Frame = +1 Query: 151 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 330 S VA VA S + AT A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF +W++ Sbjct: 59 SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116 Query: 331 WFIGQKDLGDFEDADDGLKL 390 + + L ED D L L Sbjct: 117 YTVYTSTLD--EDDDSALSL 134 [15][TOP] >UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana RepID=Q41908_ARATH Length = 133 Score = 69.7 bits (169), Expect = 1e-10 Identities = 38/108 (35%), Positives = 59/108 (54%) Frame = +1 Query: 67 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 246 AP + P+ + ++ K T +S A + + ++PA ALVDERM+ Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKKETSQSWGPGVSAAATAALTAVMSNPAMALVDERMST 87 Query: 247 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 +GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL L Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSTLE--EDEESGLSL 133 [16][TOP] >UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=B9GS65_POPTR Length = 134 Score = 69.7 bits (169), Expect = 1e-10 Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Frame = +1 Query: 142 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 315 TV E +K ++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF Sbjct: 52 TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111 Query: 316 TMWAIWFIGQKDLGDFEDADDGLKL 390 +W+++F+ L ED D G+ L Sbjct: 112 FIWSLYFVYTSSLD--EDEDSGMSL 134 [17][TOP] >UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays RepID=B6T2W4_MAIZE Length = 131 Score = 69.7 bits (169), Expect = 1e-10 Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Frame = +1 Query: 25 ANSTNIKMQALSARAPRVA------AKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLST 186 A T + AL AR+ RV A PVS GA +++ A T Sbjct: 23 ALGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTA------------- 69 Query: 187 LPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 366 +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D + Sbjct: 70 -----SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DED 123 Query: 367 DADDGLKL 390 + GL L Sbjct: 124 EESGGLSL 131 [18][TOP] >UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays RepID=B6SMK2_MAIZE Length = 130 Score = 69.7 bits (169), Expect = 1e-10 Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 4/123 (3%) Frame = +1 Query: 34 TNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA----TL 201 T I +A AR P P R+ + K + V+ K A S L A T Sbjct: 10 TTIVARAAIAR-PNALGLPALRARSERVRCSYAKDAKNAAPVSTKGAGASLLAAAGAVTA 68 Query: 202 AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 381 +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL D ++ G Sbjct: 69 SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGG 127 Query: 382 LKL 390 L L Sbjct: 128 LSL 130 [19][TOP] >UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QVP6_VITVI Length = 135 Score = 69.7 bits (169), Expect = 1e-10 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 5/85 (5%) Frame = +1 Query: 151 SEVAKKVAMLSTLPATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 315 S++ ++M ++L A AA PA ALVDER++ +GTG PFG+++ +LGW+L GVFG Sbjct: 53 SDMGSSISMGASLMAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFG 112 Query: 316 TMWAIWFIGQKDLGDFEDADDGLKL 390 +WA++F L ED + GL L Sbjct: 113 LIWALYFTYTATLE--EDDESGLSL 135 [20][TOP] >UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM Length = 133 Score = 69.3 bits (168), Expect = 2e-10 Identities = 38/112 (33%), Positives = 61/112 (54%) Frame = +1 Query: 55 LSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDE 234 ++ AP + P+ + ++ K V + A A + + ++PA ALVD+ Sbjct: 24 VAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVMSNPAMALVDD 83 Query: 235 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 RM+ +GTG PFG+++ +LGW+LLGVFG +W +F L ED + GL L Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD--EDEESGLSL 133 [21][TOP] >UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=PSBW_ARATH Length = 133 Score = 69.3 bits (168), Expect = 2e-10 Identities = 38/108 (35%), Positives = 58/108 (53%) Frame = +1 Query: 67 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 246 AP + P+ + ++ K V A A + + ++PA ALVDERM+ Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMST 87 Query: 247 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 +GTG PFG+++ +LGW+L GVFG +W +F+ L ED + GL L Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE--EDEESGLSL 133 [22][TOP] >UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans RepID=Q7XYI4_BIGNA Length = 147 Score = 68.6 bits (166), Expect = 3e-10 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 3/123 (2%) Frame = +1 Query: 31 STNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRS-EVAKKVAMLSTLPATLAA 207 S+ + L A A R PVS A T K + ++ + +K + L A A Sbjct: 24 SSALSSSNLGATAIRSRVSPVSSVRAGRMATFAQKPSMKQNMQNFQKTMGAAGLAAVGAL 83 Query: 208 H--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 381 H PA ALVD R+NGDG G P G+ND L ++L GVF T+W ++ K + D +D D G Sbjct: 84 HQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVYATSVKGISDNDDEDSG 143 Query: 382 LKL 390 + L Sbjct: 144 MGL 146 [23][TOP] >UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N1F2_9CHLO Length = 119 Score = 68.6 bits (166), Expect = 3e-10 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 5/110 (4%) Frame = +1 Query: 76 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 249 + AKP++R ++ VV KAT +++ K A+LS +LAA PA A+VDER+NGD Sbjct: 12 LVAKPLARK-VQARKAVVSKATVAKAQAPTK-AVLSAAVVSLAAQALPALAVVDERLNGD 69 Query: 250 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 390 GTG G+ND +LG+VLL + +++ ++ QKD G ++ D GL L Sbjct: 70 GTGLILGLNDELLGFVLLTIPTLIFSQFYAAQKDEGIEAGGKNDDSGLSL 119 [24][TOP] >UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJA9_9ROSI Length = 133 Score = 68.6 bits (166), Expect = 3e-10 Identities = 34/113 (30%), Positives = 61/113 (53%) Frame = +1 Query: 52 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 231 ++ + V P + + ++ K T ++++ + A + PA ALVD Sbjct: 23 SVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVD 82 Query: 232 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 ER++ +GTG PFG+++ +L W+LLGVF +W+++F+ L ED D G+ L Sbjct: 83 ERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYTSSLD--EDEDSGMSL 133 [25][TOP] >UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9ET99_ORYSJ Length = 107 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 8/103 (7%) Frame = +1 Query: 106 ARSAVTVVCKATT--------VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGR 261 A +A +VV +A +R+ +++ A S L A PA ALVDERM+ +GTG Sbjct: 6 AAAATSVVARAVLAGPLGLPQMRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGL 65 Query: 262 PFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 G+++ +LGW+LLGVFG +W+++ I DL + E++ GL L Sbjct: 66 SLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 107 [26][TOP] >UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5C3A9_VITVI Length = 70 Score = 68.2 bits (165), Expect = 3e-10 Identities = 33/72 (45%), Positives = 47/72 (65%) Frame = +1 Query: 175 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 354 M + +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F L Sbjct: 1 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 60 Query: 355 GDFEDADDGLKL 390 ED + GL L Sbjct: 61 E--EDDESGLSL 70 [27][TOP] >UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9AXP0_PHYPA Length = 109 Score = 67.8 bits (164), Expect = 5e-10 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%) Frame = +1 Query: 85 KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDERMNG 246 +PVS A +VC A S+ + ++A T ATLA AHP FALVDER++ Sbjct: 2 EPVSGLPALRMPKIVCSAEKKESQTEELSGFPQLAAAVTSAATLAYAHPVFALVDERLST 61 Query: 247 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 +GTG G+++ L W+L+GV +WA++F D+G GL L Sbjct: 62 EGTGLGLGISNTKLTWILVGVTALIWALYFFVLLDVGQRVTMTSGLDL 109 [28][TOP] >UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3 Tax=Oryza sativa RepID=PSBW_ORYSJ Length = 124 Score = 67.8 bits (164), Expect = 5e-10 Identities = 40/107 (37%), Positives = 61/107 (57%) Frame = +1 Query: 70 PRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGD 249 P++ A+ R + A V+ A +AM +T A PA ALVDERM+ + Sbjct: 25 PQMRARRSERVRCNYSKEAATPAAAVKGAGASLLAMAAT------AAPAMALVDERMSTE 78 Query: 250 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 GTG G+++ +LGW+LLGVFG +W+++ I DL + E++ GL L Sbjct: 79 GTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 124 [29][TOP] >UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SWZ8_SOYBN Length = 133 Score = 67.0 bits (162), Expect = 8e-10 Identities = 30/73 (41%), Positives = 50/73 (68%) Frame = +1 Query: 172 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 351 ++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+ Sbjct: 63 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTST 122 Query: 352 LGDFEDADDGLKL 390 L + E++ GL L Sbjct: 123 LEEGEES--GLSL 133 [30][TOP] >UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=A9PEP9_POPTR Length = 134 Score = 65.9 bits (159), Expect = 2e-09 Identities = 37/113 (32%), Positives = 59/113 (52%) Frame = +1 Query: 52 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 231 +L V P R + ++ K + ++++ + A + PA ALVD Sbjct: 24 SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVD 83 Query: 232 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 ERM+ +GTG PFG+++ +L W+LLGVF +WA++F L ED + GL L Sbjct: 84 ERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYTATLE--EDEESGLSL 134 [31][TOP] >UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam RepID=Q8W536_9FABA Length = 96 Score = 65.5 bits (158), Expect = 2e-09 Identities = 32/72 (44%), Positives = 45/72 (62%) Frame = +1 Query: 175 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 354 M + A + PA ALVDER++ +GTG PFG+++ +LGW+L VFG +W +FI L Sbjct: 27 MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSL 86 Query: 355 GDFEDADDGLKL 390 ED + GL L Sbjct: 87 E--EDEESGLSL 96 [32][TOP] >UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora stellata RepID=B5A4J5_GYMST Length = 147 Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Frame = +1 Query: 88 PVSRSGARSAVTVVCKATTVRSEVAKKVAMLST---LPATLAAH--PAFALVDERMNGDG 252 P +R AR T V + +E K L AT A H PA ALVD R+NGDG Sbjct: 41 PATRMMARQGRTAVYAKKGLNTESLKNFQRNMAAVGLSATAALHQLPAEALVDARLNGDG 100 Query: 253 TGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 390 G P G+ND L ++L GVF +WA + K + + +D D GL + Sbjct: 101 AGIPLGINDSRLFFILAGVFTLVWAAYSTSVKGISNNDDDDSGLSI 146 [33][TOP] >UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays RepID=B6TMB3_MAIZE Length = 127 Score = 63.9 bits (154), Expect = 7e-09 Identities = 30/73 (41%), Positives = 47/73 (64%) Frame = +1 Query: 172 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 351 ++L+ + + P ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ + Sbjct: 57 SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTST 116 Query: 352 LGDFEDADDGLKL 390 L ED D GL L Sbjct: 117 LD--EDDDSGLSL 127 [34][TOP] >UniRef100_Q10NF9 Retrotransposon protein, putative, unclassified, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10NF9_ORYSJ Length = 840 Score = 63.5 bits (153), Expect = 9e-09 Identities = 57/145 (39%), Positives = 66/145 (45%), Gaps = 9/145 (6%) Frame = -1 Query: 508 PLPH--------PHPPLHRRLRTAKNRGHCSSHDYEAAKKGSTTKPFTASGHRRRPRSRP 353 P PH P P R R+ + R SS D + +P + S RRRPRS P Sbjct: 302 PSPHHRRSPGRAPRSPSPARHRSPRRR---SSLDRHWSPSPGRRRPRSPSPGRRRPRS-P 357 Query: 352 GPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGGQCRRRSCAHRPGRRRGGQP-G*PAGCSA 176 P R R P+ RRRP PSPGR R R RRR + PGRRR P G P S Sbjct: 358 SPGRRRPRSPSPGRRRPRSPSPGR-RRPRSPSPGRRRPRSRSPGRRRSPSPRGSPRLRSP 416 Query: 175 WRPSWPPRCGRWWPCTPRSRQSERR 101 RP R P +PRSR + RR Sbjct: 417 KRP-------RRSPISPRSRSANRR 434 [35][TOP] >UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SEQ5_PHYPA Length = 64 Score = 63.5 bits (153), Expect = 9e-09 Identities = 30/62 (48%), Positives = 42/62 (67%) Frame = +1 Query: 205 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 384 AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F L + +D D GL Sbjct: 4 AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGL 62 Query: 385 KL 390 L Sbjct: 63 SL 64 [36][TOP] >UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PQQ7_PICSI Length = 149 Score = 63.2 bits (152), Expect = 1e-08 Identities = 29/65 (44%), Positives = 45/65 (69%) Frame = +1 Query: 196 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 375 T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D Sbjct: 87 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 144 Query: 376 DGLKL 390 GL L Sbjct: 145 SGLSL 149 [37][TOP] >UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NLC2_PICSI Length = 146 Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/65 (46%), Positives = 44/65 (67%) Frame = +1 Query: 196 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 375 T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F G ED D Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYS--GVKEDED 141 Query: 376 DGLKL 390 GL L Sbjct: 142 SGLSL 146 [38][TOP] >UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NL01_PICSI Length = 146 Score = 63.2 bits (152), Expect = 1e-08 Identities = 29/65 (44%), Positives = 45/65 (69%) Frame = +1 Query: 196 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 375 T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F ++ ED D Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 141 Query: 376 DGLKL 390 GL L Sbjct: 142 SGLSL 146 [39][TOP] >UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU Length = 162 Score = 62.4 bits (150), Expect = 2e-08 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Frame = +1 Query: 118 VTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWV 297 + +V + T E+ K+VA L + + PA A+VD+R+NGDGTG P G+ND LG + Sbjct: 68 IRLVTMSATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGII 127 Query: 298 LLGVFGTMWAIWFIGQKD----LGDFEDADDGLKL 390 L V ++ ++FI K + +D D GL L Sbjct: 128 LATVPLAIFGLYFIAGKQDASIVAGGKDDDSGLSL 162 [40][TOP] >UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1 Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA Length = 156 Score = 61.6 bits (148), Expect = 3e-08 Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 9/132 (6%) Frame = +1 Query: 22 RANSTNIKMQALSARAPRVAAKPVSRSGARSAVT----VVCKATTVRSEVAKKVAMLSTL 189 R S+ I + LS+ +P P R+G R A V +AT E K+V S L Sbjct: 28 RDKSSTIMLTILSSLSPICNLSP-RRAGPRQASNQRHGVTVRATP--QEAGKQVFGTSML 84 Query: 190 PATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI-GQKDLG-- 357 +++ PA A+VD+R+NGDGTG P G+ND LG +L V +++++FI G++D G Sbjct: 85 ISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASVPLAIFSLYFIAGKQDAGIE 144 Query: 358 -DFEDADDGLKL 390 ++ D GL L Sbjct: 145 NGGKNDDSGLSL 156 [41][TOP] >UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens RepID=Q9AXN9_PHYPA Length = 69 Score = 60.8 bits (146), Expect = 6e-08 Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +1 Query: 193 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 369 ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F L + +D Sbjct: 4 ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYFSYSSTLPEGDD 63 Query: 370 ADDGLKL 390 D GL L Sbjct: 64 -DSGLDL 69 [42][TOP] >UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9AXN8_PHYPA Length = 158 Score = 58.5 bits (140), Expect = 3e-07 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%) Frame = +1 Query: 31 STNIKMQALSARAPRVAA--KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTL 189 +T + +L++ + AA KPV+ A VVC A S+ + ++A T Sbjct: 21 ATRLATTSLASSSSGFAATLKPVAGLPALRMPKVVCAAERSESKAERVNGVAQLAAAVTS 80 Query: 190 PATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 339 ATLA +HP ALVDER++ +GTG G+++ L W+L+GV +W ++ + Sbjct: 81 AATLAYSHPVLALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWTLYLL 131 [43][TOP] >UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Tax=Mesostigma viride RepID=A2SY30_MESVI Length = 128 Score = 55.5 bits (132), Expect = 2e-06 Identities = 38/107 (35%), Positives = 58/107 (54%) Frame = +1 Query: 49 QALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALV 228 Q L AR P+ AA+ V AR AV VC+A + VA A +++ A A PA A++ Sbjct: 22 QRLVARKPQAAAR-VPAKCARKAV--VCQAQKNEAAVAVSAAAIASSVAFAA--PAQAII 76 Query: 229 DERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 369 ++ M +G G G+N LG+V+LG F +W+++ + L ED Sbjct: 77 EDAMYTEGAGIALGLNSGALGFVMLGAFTLVWSLYSSYTRSLDSSED 123 [44][TOP] >UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC Length = 1279 Score = 54.7 bits (130), Expect = 4e-06 Identities = 36/95 (37%), Positives = 45/95 (47%) Frame = -2 Query: 342 ADEPDSPHGAEDAQQDPAQDGVVHAEGAASAVAVHALIDQGEGGVGSQGSRQGAQHGDLL 163 A E + G+ A D + G +A GA A G G G GS GA+ G + Sbjct: 251 ASEDRTGSGSGPAPGDGSAPGAAYASGAGHAPG------DGTGPGGGYGS--GARPGPGV 302 Query: 162 GHLAADGGGLAHHGHGRASAGAAHGLGSHAGGASG 58 GH+ DG G H GR + GA H GS AGGA+G Sbjct: 303 GHVPGDGAGAGHVPGGRTAPGAGHAPGSGAGGAAG 337