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[1][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 334 bits (857), Expect = 2e-90
Identities = 165/165 (100%), Positives = 165/165 (100%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH
Sbjct: 76 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 240
[2][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 329 bits (844), Expect = 5e-89
Identities = 161/165 (97%), Positives = 164/165 (99%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[3][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 328 bits (840), Expect = 1e-88
Identities = 160/165 (96%), Positives = 164/165 (99%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITA+DIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[4][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 327 bits (837), Expect = 3e-88
Identities = 160/165 (96%), Positives = 163/165 (98%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEET YLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETVYLE 240
[5][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 327 bits (837), Expect = 3e-88
Identities = 160/165 (96%), Positives = 163/165 (98%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[6][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 327 bits (837), Expect = 3e-88
Identities = 160/165 (96%), Positives = 163/165 (98%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[7][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 323 bits (827), Expect = 5e-87
Identities = 158/165 (95%), Positives = 162/165 (98%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITA+DIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATL EPIDLCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLMEPIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[8][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 322 bits (826), Expect = 6e-87
Identities = 157/165 (95%), Positives = 162/165 (98%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEI+DNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIVDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCI LKIERNRGYSLK+SNN EDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPIDLCIGLKIERNRGYSLKISNNLEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[9][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 317 bits (813), Expect = 2e-85
Identities = 155/165 (93%), Positives = 161/165 (97%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPP+VEI+DNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIVDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IAT+TE IDLCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGN K
Sbjct: 136 IATVTESIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNGK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETF+LE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFHLE 240
[10][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 317 bits (811), Expect = 3e-85
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVL+SNLYGTRN ICVQGPGYITARDIILPP+VEI+DNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLKSNLYGTRNPFICVQGPGYITARDIILPPSVEIVDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPI+LCI LKIERNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEK
Sbjct: 136 IATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILF+EIWTNGSLTPKEAL++ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFIEIWTNGSLTPKEALYEASRNLINLFIPFLHVEEETFYLE 240
[11][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 312 bits (799), Expect = 8e-84
Identities = 153/165 (92%), Positives = 158/165 (95%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNLNEIVLRSNLYG RNA+ICVQGPGYITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLNEIVLRSNLYGARNAIICVQGPGYITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTE IDLCI LKIERNRGYSLK+ N FEDRSYPIDAVFMPV+NANHSIHSYGNGN K
Sbjct: 136 IATLTESIDLCIGLKIERNRGYSLKILNTFEDRSYPIDAVFMPVQNANHSIHSYGNGNGK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[12][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 305 bits (781), Expect = 1e-81
Identities = 150/165 (90%), Positives = 157/165 (95%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNL EIVLRSNLYGT NALICVQGPG ITARDIILPP+VEIIDNTQH
Sbjct: 76 NIVGIQESVHEILMNLQEIVLRSNLYGTCNALICVQGPGSITARDIILPPSVEIIDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCI L+IERNRGYSLKM N+FED SYPIDA+FMPV+NANHSIHSYG GNEK
Sbjct: 136 IATLTEPIDLCIGLQIERNRGYSLKMPNHFEDGSYPIDALFMPVQNANHSIHSYGTGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNG+LTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[13][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 304 bits (779), Expect = 2e-81
Identities = 149/165 (90%), Positives = 156/165 (94%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GIQESVHEILMNL EIVLRSNLYGT NALICVQGPGYITARDIILPP+VEI+DNTQH
Sbjct: 76 NIVGIQESVHEILMNLQEIVLRSNLYGTCNALICVQGPGYITARDIILPPSVEIMDNTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IATLTEPIDLCI L+IERNRGYSLKM N FED SYPIDA+FMPV+NANHSIHSYG GNE
Sbjct: 136 IATLTEPIDLCIGLQIERNRGYSLKMPNPFEDGSYPIDALFMPVQNANHSIHSYGTGNEN 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNG+LTPKEALH+ASRNLINLFIPFLHVEEETFYLE
Sbjct: 196 QEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLE 240
[14][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 290 bits (742), Expect = 3e-77
Identities = 139/164 (84%), Positives = 152/164 (92%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR+A ICV+GPGY+TA+DI+LPP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRDAFICVKGPGYVTAQDIVLPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDL I L+IERNRGY +K NNF+D SYPIDAVFMPV+NANHSIHSYG GNEKQ
Sbjct: 137 ASLTEPIDLRIGLQIERNRGYGIKTPNNFQDGSYPIDAVFMPVQNANHSIHSYGTGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLINLFIPFLH EEE FYLE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHAEEEKFYLE 240
[15][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 288 bits (737), Expect = 1e-76
Identities = 138/164 (84%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGTRNA IC +GPGY+TA+DIILPP+VEI+DNTQHI
Sbjct: 79 IAGIQESVHEILMNLKEIVLRSNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHI 138
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+IERNRGY +K NNF D SYPID VFMPV N NHSIHSYGNGNEKQ
Sbjct: 139 ASLTEPIDLCIGLQIERNRGYGIKTPNNFHDGSYPIDVVFMPVRNVNHSIHSYGNGNEKQ 198
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +LE
Sbjct: 199 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENSHLE 242
[16][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 286 bits (731), Expect = 7e-76
Identities = 137/164 (83%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR A IC +GPGY+TA+DII PP+VEI+DNTQHI
Sbjct: 71 IVGIQESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHI 130
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPIDLCI L+IERNRGYS+K NNF+D SYPIDAVFMPV NANHSIHSYGNGNE+Q
Sbjct: 131 ARLMEPIDLCIGLQIERNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQ 190
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEET +LE
Sbjct: 191 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLE 234
[17][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 286 bits (731), Expect = 7e-76
Identities = 137/164 (83%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR A IC +GPGY+TA+DII PP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPIDLCI L+IERNRGYS+K NNF+D SYPIDAVFMPV NANHSIHSYGNGNE+Q
Sbjct: 137 ARLMEPIDLCIGLQIERNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEET +LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLE 240
[18][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 281 bits (720), Expect = 1e-74
Identities = 138/164 (84%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A ICV+GPG +TA DIILPP+VEI+DNTQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVLRSNLYGTCDASICVKGPGCVTAEDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI L+IERNRGY LK +NFED SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 AWLTEPIDFCIGLQIERNRGYILKTHHNFEDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EEE +LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLE 240
[19][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 281 bits (720), Expect = 1e-74
Identities = 134/164 (81%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLR NLYGTRNA IC +GPGY+TA+DIILPP+VEI+DNTQH+
Sbjct: 79 IVGIQESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHV 138
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+IERNRGY +K NF D SYPIDAVFMPV NANHSIH YGN NEKQ
Sbjct: 139 ASLTEPIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQ 198
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +LE
Sbjct: 199 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLE 242
[20][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 281 bits (718), Expect = 2e-74
Identities = 137/164 (83%), Positives = 150/164 (91%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 51 IAGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEIVDNTQHI 110
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+I+RNRGY +KM +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 111 ASLTEPIDLCIGLQIKRNRGYLIKMPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 170
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+A RNLI+LFIPFLH EEE LE
Sbjct: 171 EILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLE 214
[21][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 281 bits (718), Expect = 2e-74
Identities = 134/164 (81%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 ITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPID CI L+IERNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILF+EIWTNGSLTPKEALH ASRNLI+LFIPFLH+EE+ YL+
Sbjct: 197 EILFIEIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLYLQ 240
[22][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 280 bits (717), Expect = 3e-74
Identities = 134/164 (81%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 ITGIQESVHEILMNLKEIVLRSNLYGTSEASICVKGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPID CI L+IERNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILF+EIWTNGSLTPKEALH ASRNLI+LFIPFLH+EE+ YL+
Sbjct: 197 EILFIEIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLYLQ 240
[23][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 280 bits (717), Expect = 3e-74
Identities = 133/164 (81%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEI+MNL EIVLRSNLYGT A +CV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 ITGIQESVHEIIMNLKEIVLRSNLYGTSEASVCVKGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPID CI L+IERNRGY +K NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDFCIGLQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EE+ YL+
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ 240
[24][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 279 bits (713), Expect = 8e-74
Identities = 133/164 (81%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTRNA IC++GPGY+TA+DII PP+VE +DNTQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTRNASICIRGPGYVTAQDIISPPSVETVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+IERNRGY +K NN +D SYPIDAVFMPV NANHSIHSY NGNEKQ
Sbjct: 137 ANLTEPIDFCIELEIERNRGYRMKTPNNSQDGSYPIDAVFMPVRNANHSIHSYANGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH +EE LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAQEENILLE 240
[25][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 278 bits (712), Expect = 1e-73
Identities = 133/164 (81%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EI+LRSNLYGT +A ICV+GPG +TA+DIILPP VEI+DNTQHI
Sbjct: 77 ITGIQESVHEILMNLKEIILRSNLYGTSDASICVKGPGSVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPID CI L+IERNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EE+ YL+
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ 240
[26][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 278 bits (711), Expect = 1e-73
Identities = 133/164 (81%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IMGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTE ID CI L+I+RNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTETIDFCIGLQIKRNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EE+ YL+
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHIEEDNLYLQ 240
[27][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 278 bits (711), Expect = 1e-73
Identities = 135/164 (82%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTRNA ICV+GPG +TA+DIILP +VEI+DNTQ+I
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGCVTAQDIILPTSVEIVDNTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+LCI L+IERNRGY +K NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPINLCIGLQIERNRGYHIKTPKNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE 240
[28][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 276 bits (707), Expect = 4e-73
Identities = 132/164 (80%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLR NLYGTRNA IC +GPGY+TA+DIILPP+VEI+DNTQH+
Sbjct: 79 IVGIQESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHV 138
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+IERNRGY +K NF D SYPIDAVFMPV NANHSIH YGN NEKQ
Sbjct: 139 ASLTEPIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQ 198
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFI FLH +EE +LE
Sbjct: 199 EILFLEIWTNGSLTPKEALHEASRNLIDLFIHFLHAKEENLHLE 242
[29][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 276 bits (706), Expect = 5e-73
Identities = 133/164 (81%), Positives = 149/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQES+HEILMNL +VL+SNLYGT +A I V+GPGY+TA+DIILPP VEIIDNTQHI
Sbjct: 77 IAGIQESIHEILMNLKNVVLKSNLYGTCDASIYVKGPGYVTAQDIILPPFVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTE IDLCI L+IERNRGY +K +NNF+D SYPIDAVFMPV NANHS+HSYGNGNEKQ
Sbjct: 137 ASLTESIDLCIGLQIERNRGYRIKPTNNFQDGSYPIDAVFMPVRNANHSVHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE 240
[30][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 276 bits (705), Expect = 7e-73
Identities = 134/164 (81%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL EIVLRSNLYGT NA ICV+GPG +TA+DIILPP+VEIIDNTQHI
Sbjct: 77 ITGIQESIHEILMNLKEIVLRSNLYGTHNASICVKGPGCVTAQDIILPPSVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+L EPIDL I L+IERNRGY +K NF+D SY IDAVFMPV NANHS+HSYGNGNEKQ
Sbjct: 137 ASLREPIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE+F+LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEESFHLE 240
[31][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 275 bits (704), Expect = 9e-73
Identities = 133/164 (81%), Positives = 150/164 (91%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTR+A ICV+GPGY+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDITQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCIEL+IERNRGY +K NN ++RSYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERNRGYRMKTPNNAQERSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWT+GSLTPKEAL++ASRNLI+LFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTDGSLTPKEALYEASRNLIDLFIPFLHAEEQDTKLE 240
[32][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 275 bits (703), Expect = 1e-72
Identities = 135/164 (82%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMN EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IAGIQESVHEILMNFKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+IERNRGY +KM +N +D SYPIDAVFMPV NANHSIHSYG+GNEK
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYLMKMPHNSQDGSYPIDAVFMPVRNANHSIHSYGSGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+A RNLI+LFIPFLH EEET LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEETSPLE 240
[33][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 275 bits (703), Expect = 1e-72
Identities = 132/164 (80%), Positives = 148/164 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIV RSNLYGT +A ICV+GPGY+TA+DI+LPP VEI+DNTQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVFRSNLYGTCDASICVRGPGYVTAQDIVLPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPI+LCI L+IERNRGY +K NF+D SYPIDAVFMP+ NAN+SIHSYGNGNEKQ
Sbjct: 137 ARLMEPINLCIRLEIERNRGYLIKTPQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALHQASRNLI+LFIPFLH+EE+ +LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHQASRNLIDLFIPFLHMEEQNSHLE 240
[34][TOP]
>UniRef100_C6TK62 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
RepID=C6TK62_SOYBN
Length = 269
Score = 275 bits (702), Expect = 2e-72
Identities = 131/164 (79%), Positives = 147/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTR+A IC +GPGY+TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IIGIEESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +TEP++LCIELKIERNRGY +K NF+D SYPIDA FMPV N NHSIHSY NGNEKQ
Sbjct: 137 ANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE+ F LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFNLE 240
[35][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 275 bits (702), Expect = 2e-72
Identities = 131/164 (79%), Positives = 147/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTR+A IC +GPGY+TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IIGIEESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +TEP++LCIELKIERNRGY +K NF+D SYPIDA FMPV N NHSIHSY NGNEKQ
Sbjct: 137 ANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE+ F LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFNLE 240
[36][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 274 bits (701), Expect = 2e-72
Identities = 132/158 (83%), Positives = 144/158 (91%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR+A ICV+GPGY+TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI LCIEL+IERNRGY +K NNF++ SYPIDAVFMPV NANHSIHSY NGNE Q
Sbjct: 137 ANLTEPITLCIELQIERNRGYRIKTPNNFQNGSYPIDAVFMPVRNANHSIHSYVNGNENQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPF H EE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFFHAEE 234
[37][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 274 bits (700), Expect = 3e-72
Identities = 133/163 (81%), Positives = 146/163 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT NA ICV+GPG +TA+DI+LPP+VEIIDNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+L EPI LCI L+IERNRGY +K NNF+D SYPIDAVFMPV NANHSIHSYGN NEKQ
Sbjct: 137 ASLMEPIHLCIGLQIERNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+ASRNLI+LF+PFLH EEE +L
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLHL 239
[38][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 274 bits (700), Expect = 3e-72
Identities = 133/163 (81%), Positives = 146/163 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT NA ICV+GPG +TA+DI+LPP+VEIIDNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+L EPI LCI L+IERNRGY +K NNF+D SYPIDAVFMPV NANHSIHSYGN NEKQ
Sbjct: 137 ASLMEPIHLCIGLQIERNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+ASRNLI+LF+PFLH EEE +L
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLHL 239
[39][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 274 bits (700), Expect = 3e-72
Identities = 131/159 (82%), Positives = 145/159 (91%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR+A ICV+GPG +TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPI+LCIELKIERNRGY ++ NNF+D SYP+DA+FMPV N NHSIHSY NGNEKQ
Sbjct: 137 ANLMEPINLCIELKIERNRGYHIQTPNNFQDASYPMDAIFMPVRNVNHSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEE 235
[40][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 273 bits (699), Expect = 3e-72
Identities = 133/164 (81%), Positives = 147/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL EIVLRSNLYGT +A ICV+GPG +TA+DIILPP+VEIIDNTQHI
Sbjct: 77 ITGIQESIHEILMNLKEIVLRSNLYGTHDASICVKGPGCVTAQDIILPPSVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+L EPIDL I L+IERNRGY +K NF+D SY IDAVFMPV NANHS+HSYGNGNEKQ
Sbjct: 137 ASLREPIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE F+LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLE 240
[41][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 273 bits (699), Expect = 3e-72
Identities = 132/164 (80%), Positives = 148/164 (90%), Gaps = 1/164 (0%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQESVHEILMNL EI+L+SNLYGT +A IC++GPGY+TA+DII PP VEI+DNTQHI
Sbjct: 77 LVGIQESVHEILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
A+L EPIDLCI L+IERNRGY +K +NNF+D SYPIDAVFMPV NANHSIHSYGNGNEK
Sbjct: 137 ASLAEPIDLCIGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEK 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
QEILFLEIWTNGSLTPKEALHQASRNLI+LFIPFLH EEE +L
Sbjct: 197 QEILFLEIWTNGSLTPKEALHQASRNLIDLFIPFLHTEEENLHL 240
[42][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 273 bits (697), Expect = 6e-72
Identities = 134/166 (80%), Positives = 149/166 (89%), Gaps = 2/166 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQES+HEILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VEIIDNTQHI
Sbjct: 77 IAGIQESIHEILMNLKEIVLRSNLYGTCDASICVKGPGYVTAQDIILPPFVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNF--EDRSYPIDAVFMPVENANHSIHSYGNGNE 141
A+LT+ IDLCI L+IERNRGY +K +NNF +D SY IDAVFMPV NANHS+HSYGNGNE
Sbjct: 137 ASLTKAIDLCIGLQIERNRGYRIKPTNNFQVQDGSYSIDAVFMPVRNANHSVHSYGNGNE 196
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
KQEILFLEIWTNGSLTPKEALH+ASRNLI+ FIPFLH EEE +LE
Sbjct: 197 KQEILFLEIWTNGSLTPKEALHEASRNLIDFFIPFLHAEEENLHLE 242
[43][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 273 bits (697), Expect = 6e-72
Identities = 132/165 (80%), Positives = 147/165 (89%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
NI GI+ESVHEILMNL EIVLRSNLYGTR+A ICV+GP ++TA+DII PP+VEIID TQH
Sbjct: 76 NIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRHVTAQDIISPPSVEIIDTTQH 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IA+LTEPIDLCI L+IERNRGY++K N +D YPIDAVFMPV NANHSIHSYGNGNEK
Sbjct: 136 IASLTEPIDLCIGLQIERNRGYNMKTPKNSQDGRYPIDAVFMPVRNANHSIHSYGNGNEK 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EE F L+
Sbjct: 196 QEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHANEENFILK 240
[44][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 272 bits (696), Expect = 7e-72
Identities = 131/164 (79%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL EIVLRSNLYGTR+A IC +GPG +TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGSVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+LC+ELK+ERNRGY +K NN +D SY IDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPINLCMELKLERNRGYRIKTLNNIQDESYTIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL +ASRNLI+LFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTNGSLTPKEALFEASRNLIDLFIPFLHAEEDKLNLE 240
[45][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 271 bits (692), Expect = 2e-71
Identities = 131/164 (79%), Positives = 149/164 (90%), Gaps = 1/164 (0%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQESVH+ILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VE++DNTQHI
Sbjct: 77 LVGIQESVHDILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
A+LTEPI+LCI L+IERNRGY +K +NN +D SYPIDAVFMPV NANHSIHSYGNGN+K
Sbjct: 137 ASLTEPIELCIGLQIERNRGYLIKTPNNNSKDGSYPIDAVFMPVRNANHSIHSYGNGNDK 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
QEILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +L
Sbjct: 197 QEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHL 240
[46][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 270 bits (689), Expect = 5e-71
Identities = 130/164 (79%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL EIVL+SNLYGTR+A IC +GPGY+TA+DIILPP+VEI+DNTQHI
Sbjct: 77 IVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+LCIEL+IER RGY +K NN +D SY IDAVFMPV NANHSIHSY NGNEKQ
Sbjct: 137 ANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
[47][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 270 bits (689), Expect = 5e-71
Identities = 129/164 (78%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+HEI MNL EIVLRSNLYGTRNA ICV+GP Y+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESIHEIFMNLKEIVLRSNLYGTRNASICVRGPRYVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCIEL+I+R+RGY +K N +++ SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIQRDRGYRMKTPNKYQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEGIRLE 240
[48][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 269 bits (688), Expect = 6e-71
Identities = 130/164 (79%), Positives = 147/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRS+LYGTR+A ICV+GP Y+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCIEL+IER+RGY +K NN++D SYPIDAV MPV NANHSIHSYGN NEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIVLE 240
[49][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 269 bits (687), Expect = 8e-71
Identities = 128/163 (78%), Positives = 148/163 (90%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVL+SNLYGTR+A ICV+GP Y+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLKSNLYGTRDASICVRGPKYVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+LCIEL+IER+RGY +K NN++D SYPIDAV MPV NANHSIHSYG+GNEKQ
Sbjct: 137 ASLTEPINLCIELQIERDRGYRMKAPNNYQDGSYPIDAVSMPVRNANHSIHSYGSGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EE+ +L
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIHL 239
[50][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 267 bits (683), Expect = 2e-70
Identities = 133/164 (81%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A I ++GPGY+TA DIILPP VE++D+TQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVLRSNLYGTCDASISIKGPGYVTAEDIILPPHVEVVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPIDLCI LKIERNRGY LK NFED SYPIDAVFMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLMEPIDLCIGLKIERNRGYFLKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+E+E +LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHIEKENLHLE 238
[51][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 267 bits (683), Expect = 2e-70
Identities = 129/164 (78%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQESVHEILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DII PP VEIIDNTQHI
Sbjct: 77 LVGIQESVHEILMNLKEIVLRSNLYGTCDAAICVKGPGYVTAQDIISPPYVEIIDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+LCI L+IERNRGY +K + NF+D SYPIDAVFMPV N NHSI+SYG GN+K
Sbjct: 137 ASLTEPIELCIGLQIERNRGYLIKTAKNFQDGSYPIDAVFMPVRNVNHSIYSYGTGNDKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+A+RNLI+LFIPFLH EEE LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEAARNLIDLFIPFLHTEEENLDLE 240
[52][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 266 bits (681), Expect = 4e-70
Identities = 133/164 (81%), Positives = 146/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEI MNL EIVLRSNLYGT +A I ++GPG++TA+DIILPP VEI+D+TQHI
Sbjct: 77 IAGIQESVHEIFMNLKEIVLRSNLYGTCDASISIKGPGHVTAKDIILPPHVEIVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCI LKIERNRGY +K NFED SYPIDAVFMPV NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDLCIGLKIERNRGYFIKTHPNFEDGSYPIDAVFMPVRNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EEE +LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLE 238
[53][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 265 bits (677), Expect = 1e-69
Identities = 134/164 (81%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A I +GPGY+TA DIILPP VEI+D+TQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVLRSNLYGTCDASISFKGPGYVTAEDIILPPHVEIVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCI LKIERNRGY +K NFED SYPIDAVFMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDLCIGLKIERNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+E+E LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLPLE 238
[54][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 265 bits (677), Expect = 1e-69
Identities = 134/164 (81%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A I +GPGY+TA DIILPP VEI+D+TQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVLRSNLYGTCDASISFKGPGYVTAEDIILPPHVEIVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCI LKIERNRGY +K NFED SYPIDAVFMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDLCIGLKIERNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+E+E LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLPLE 238
[55][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 265 bits (677), Expect = 1e-69
Identities = 129/164 (78%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGT +A ICV+GP +TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTLDASICVRGPRSVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCI L+IER+RGY LK NN++D SYPID VFMPV NANHSIHSYGNG EKQ
Sbjct: 137 ANLTEPIDLCIGLQIERDRGYRLKTPNNYQDGSYPIDTVFMPVRNANHSIHSYGNGTEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLINLFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLINLFIPFLHAEEQEILLE 240
[56][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 265 bits (676), Expect = 2e-69
Identities = 125/164 (76%), Positives = 147/164 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEI+MNL EIVLRSNLYGT +A IC++GP Y+TA+DIILPP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEIVMNLKEIVLRSNLYGTLDASICIRGPRYVTAQDIILPPSVEIVDATQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTE +DLCI+L+IER+RGYS+K +N ED SYPIDA+FMPV NANHS+HSYGNGNEKQ
Sbjct: 137 ANLTERVDLCIKLQIERDRGYSMKTPHNDEDGSYPIDAIFMPVRNANHSVHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILF+EIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE +LE
Sbjct: 197 EILFIEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEREIHLE 240
[57][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 264 bits (675), Expect = 2e-69
Identities = 126/159 (79%), Positives = 142/159 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTR+A ICV+GPGY+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEP+D CI L+IE NRGY +K NN + SYPIDAVFMPV NANHSIHSYGNGNE Q
Sbjct: 137 ASLTEPVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQ 235
[58][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 263 bits (672), Expect = 5e-69
Identities = 130/164 (79%), Positives = 142/164 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGTR A IC +GPGY+TA+DII PP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPIDLCI L+IERNRGY + SYPIDAVFMPV NANHSIHSYGNG+E+Q
Sbjct: 137 ARLMEPIDLCIGLQIERNRGY---------NGSYPIDAVFMPVRNANHSIHSYGNGSERQ 187
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEET +LE
Sbjct: 188 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLE 231
[59][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 263 bits (672), Expect = 5e-69
Identities = 127/164 (77%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESVHEILMNL EIVLRSNLYGTR+A ICV+GP +TA+DII PP+VE++D TQHI
Sbjct: 77 IAGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+I+R+RGY +K + N +D SYPIDAV MPV NANHSIHSYGNGN+KQ
Sbjct: 137 ASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFE 240
[60][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 263 bits (672), Expect = 5e-69
Identities = 127/164 (77%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESVHEILMNL EIVLRSNLYGTR+A ICV+GP +TA+DII PP+VE++D TQHI
Sbjct: 77 IAGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L+I+R+RGY +K + N +D SYPIDAV MPV NANHSIHSYGNGN+KQ
Sbjct: 137 ASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFE 240
[61][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 263 bits (671), Expect = 6e-69
Identities = 129/164 (78%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGT +A ICV+GP ITA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTCDASICVKGPINITAKDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEP DLCI L+IERNRGY +K N ++ SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPFDLCIGLQIERNRGYRMKTPNKAQNGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIILE 240
[62][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 263 bits (671), Expect = 6e-69
Identities = 129/165 (78%), Positives = 147/165 (89%), Gaps = 1/165 (0%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL +IVLRSNLYGT +ALICV+GPGY+TA+DI+LPP+VEI+DNTQHI
Sbjct: 77 IVGIQESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQDILLPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFED-RSYPIDAVFMPVENANHSIHSYGNGNEK 138
A+LTEPIDL I L+IER+RGY++K N F+D YPIDAVFMPV NANHSI SYGNGNEK
Sbjct: 137 ASLTEPIDLSIGLQIERSRGYNIKTPNTFQDGNCYPIDAVFMPVRNANHSIQSYGNGNEK 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
QEILFLEIWTNGSLTPKEALH+ASR+LI+LFIPFL E+E LE
Sbjct: 197 QEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLPLE 241
[63][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 262 bits (670), Expect = 8e-69
Identities = 129/166 (77%), Positives = 149/166 (89%), Gaps = 3/166 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQESVH+ILMNL EIVLRSNLYGT +A ICV+GPGY+TA+DIILPP VE++DNTQHI
Sbjct: 77 LVGIQESVHDILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSY--GNGN 144
A+LTEPI+L I L+IER+RGY +K +NNF+D SYPIDAVFMP+ NANHSIHSY GNGN
Sbjct: 137 ASLTEPIELHIGLQIERSRGYLIKTPNNNFQDGSYPIDAVFMPIRNANHSIHSYGNGNGN 196
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
+KQEILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE +L
Sbjct: 197 DKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHL 242
[64][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 262 bits (669), Expect = 1e-68
Identities = 127/158 (80%), Positives = 141/158 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GP +TA+DIILPP VEI+DNTQHI
Sbjct: 77 ILGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPRGVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCI L++ERNRGY +K NNF+D S+PIDA+FMPV N NHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQLERNRGYHIKAPNNFQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
EILFLEIWTNGSLTPKEAL++ASRNLI+L IPFLH EE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLLIPFLHAEE 234
[65][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 262 bits (669), Expect = 1e-68
Identities = 129/164 (78%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL EIVLRSNLYGTR A IC +GPGY+TA+DIILP +VE+IDNTQHI
Sbjct: 77 IVGIQESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQDIILP-SVEVIDNTQHI 135
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+LCIEL+IER RGY +K NN +D SY IDAVFMPV NANHSIHSY NGN+KQ
Sbjct: 136 ANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNQKQ 195
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE E
Sbjct: 196 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 239
[66][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 261 bits (666), Expect = 2e-68
Identities = 127/164 (77%), Positives = 142/164 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRS YGT +A ICV+GPG +TA+DII PP VEI+D TQHI
Sbjct: 77 IVGIQESVHEILMNLKEIVLRSTFYGTCDASICVRGPGGVTAQDIISPPYVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDL IEL++ERNRGY +K NNF+D SYPID VFMPV N NHSIHSY NGNEKQ
Sbjct: 137 ANLTEPIDLRIELQLERNRGYRIKTPNNFQDGSYPIDVVFMPVRNVNHSIHSYSNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFL+ E+E F+LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLYAEKENFHLE 240
[67][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 261 bits (666), Expect = 2e-68
Identities = 126/164 (76%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEIL+NL EI+LRSNLYG +A ICV+GP Y+TA+DII PP VEI+D TQHI
Sbjct: 77 IVGIEESVHEILLNLKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCIEL+I+R+RGY +K +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPIDLCIELQIKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFE 240
[68][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 261 bits (666), Expect = 2e-68
Identities = 124/164 (75%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIV RS+LYGTR A ICV+GP Y+TA+DII PP+V+I+D TQ+I
Sbjct: 77 IVGIEESVHEILMNLKEIVFRSHLYGTRGASICVRGPRYVTAQDIISPPSVKIVDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPIDLCIEL+IER+RGY +K NN++D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRIKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGS TPKEAL++ASRNLI+LF+PFLH EE+ +E
Sbjct: 197 EILFLEIWTNGSFTPKEALYEASRNLIDLFLPFLHAEEQDINVE 240
[69][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 260 bits (665), Expect = 3e-68
Identities = 124/164 (75%), Positives = 144/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL +IV RS+LYGT +A ICV+GP ++TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKKIVFRSDLYGTLDASICVRGPRHVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP+DLCIELKIER RGY ++ NN++D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 AILTEPVDLCIELKIERGRGYCMRTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE+ +E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDINIE 240
[70][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 260 bits (665), Expect = 3e-68
Identities = 127/164 (77%), Positives = 145/164 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEIL+NL EIVLRSNLYG R+A ICV+GP Y+TA+DIILPP+VEI+D TQHI
Sbjct: 77 IIGIEESVHEILLNLKEIVLRSNLYGVRDASICVRGPRYVTAQDIILPPSVEIVDPTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDL IEL+I+R+RGY ++ +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPIDLYIELQIKRDRGYRMEPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFE 240
[71][TOP]
>UniRef100_A9L9C8 RNA polymerase alpha subunit n=1 Tax=Lemna minor RepID=A9L9C8_LEMMI
Length = 284
Score = 260 bits (664), Expect = 4e-68
Identities = 128/164 (78%), Positives = 144/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EIVLRSNLYGTR A ICV+GP ITA DIILP +VEI+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIVLRSNLYGTREASICVKGPKTITAEDIILPASVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
ATLTEP+DL I L+I+R+RGY ++ +NN +D SYPIDAVFMPV NANHSI+SYGNGNEKQ
Sbjct: 137 ATLTEPLDLYIGLQIQRDRGYRMRPTNNSQDGSYPIDAVFMPVRNANHSIYSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EE+ LE
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEKDINLE 240
[72][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 258 bits (658), Expect = 2e-67
Identities = 124/159 (77%), Positives = 142/159 (89%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESVHEIL+NL +IVLRSNLYG RNA ICV+GP YITA+DII PP+VEI+D TQHI
Sbjct: 77 IAGIEESVHEILLNLKDIVLRSNLYGVRNASICVRGPKYITAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+LCIEL+I+R+RGY +K +N+ D SYPID V MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPINLCIELQIKRDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+EIWTNGSLTPKEAL++ASRNLI+L IPFLH EEE
Sbjct: 197 EILFIEIWTNGSLTPKEALYEASRNLIDLLIPFLHAEEE 235
[73][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 257 bits (656), Expect = 3e-67
Identities = 124/164 (75%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEI MNL EIVL+SN+YGT++A I +GPGYITA+DIILPP+VEI+DN QHI
Sbjct: 77 IIGIEESVHEIFMNLKEIVLKSNMYGTQDASISFKGPGYITAQDIILPPSVEIVDNRQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +TEP++LCIELKIERNRGY +K NF+D SY IDA FMPV N N+SIHSY NGNEKQ
Sbjct: 137 ANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++AS+NLI+LFIPFLH EEE F LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASQNLIDLFIPFLHAEEENFNLE 240
[74][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 257 bits (656), Expect = 3e-67
Identities = 121/159 (76%), Positives = 141/159 (88%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GI+ESVHEILMNL ++V RS+LYGT +A ICV+GP ++TA+DII PP+VEI+D TQHI
Sbjct: 77 VVGIEESVHEILMNLKKMVFRSDLYGTLDASICVRGPRHVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP+DLCIELKIER RGY + NN++D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 AVLTEPVDLCIELKIERGRGYCTRTQNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQ 235
[75][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 256 bits (654), Expect = 6e-67
Identities = 128/164 (78%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IMGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
ATLTEPI+L I L+IE+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN +
Sbjct: 137 ATLTEPIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--K 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+L IPFLH +EE LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLNLE 238
[76][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 256 bits (654), Expect = 6e-67
Identities = 124/164 (75%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GI+ESVHEIL NL EIVLRSNLY R+A ICV+GP Y+TA+DII PP VEI+D TQ+I
Sbjct: 77 VVGIEESVHEILFNLKEIVLRSNLYEIRDASICVRGPRYVTAQDIISPPYVEIVDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCIEL+I+R+RGY +K N +D SYPIDAVFMPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPIDLCIELEIKRDRGYRMKPITNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFVPFLHAEEEDINFE 240
[77][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 256 bits (653), Expect = 7e-67
Identities = 130/164 (79%), Positives = 140/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESV EILMNL EIVLRSNLYGT A IC +GPGY+TA+DIILPP VEI DNTQHI
Sbjct: 62 IAGIQESVPEILMNLKEIVLRSNLYGTCGASICARGPGYVTAQDIILPPCVEIGDNTQHI 121
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI CI L+IER+RGY +K + F+DRSYPIDAVFMPV N NHSIHSY GNEKQ
Sbjct: 122 ARLTEPISFCIGLEIERSRGYLIKSPHIFQDRSYPIDAVFMPVRNVNHSIHSY--GNEKQ 179
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH EEE LE
Sbjct: 180 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 223
[78][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 256 bits (653), Expect = 7e-67
Identities = 129/164 (78%), Positives = 143/164 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVHEILMNL EIVLRSNLYGT +A I ++GPGY+TA DIILPP VEI+D+TQHI
Sbjct: 77 IAGIQESVHEILMNLKEIVLRSNLYGTCDASISIKGPGYVTAEDIILPPHVEIVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPI+ I LKIERN GY +K NFED SYPIDA+FMPV NANHSI+SY GNEKQ
Sbjct: 137 AWLTEPINFFIGLKIERNHGYFIKTHANFEDGSYPIDALFMPVRNANHSINSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+LFIPFLH+EEE +LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLE 238
[79][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 255 bits (651), Expect = 1e-66
Identities = 126/166 (75%), Positives = 144/166 (86%), Gaps = 2/166 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES+HEILMNL +IVLRSNLYGTR+A IC +GPGY+TARDIILPP+VEI+DNTQHI
Sbjct: 77 IVGIQESIHEILMNLKQIVLRSNLYGTRDASICFKGPGYVTARDIILPPSVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDA--VFMPVENANHSIHSYGNGNE 141
A LTEPI+LCIEL+IER RGY K +N +D SY ID VFMPV +AN+SIHSY N NE
Sbjct: 137 ANLTEPINLCIELQIERARGYRKKTIDNIQDGSYTIDVDPVFMPVIHANYSIHSYLNANE 196
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
KQEILFLEIWTNGSLTPKEAL++A+RNLI+LFIPFLH EEE F+ E
Sbjct: 197 KQEILFLEIWTNGSLTPKEALYEAARNLIDLFIPFLHAEEENFHFE 242
[80][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 255 bits (651), Expect = 1e-66
Identities = 127/164 (77%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IMGIQESVHEILMNLKEIVLRSNLYGTYEASICVRGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+L I L+IE+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN +
Sbjct: 137 ASLTEPIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--K 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+L IPFLH +EE LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLNLE 238
[81][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 254 bits (650), Expect = 2e-66
Identities = 127/164 (77%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IMGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+L I L+IE+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN +
Sbjct: 137 ASLTEPIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--K 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+ASRNLI+L IPFLH +EE LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLSLE 238
[82][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 254 bits (649), Expect = 2e-66
Identities = 123/164 (75%), Positives = 140/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQE VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPP+V I+DNTQHI
Sbjct: 77 IVGIQEPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +TEPI LCI L+IER+RGY + NF+D SY IDA+FMPV NANHSIHSY NGNEKQ
Sbjct: 137 ANVTEPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE E
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFE 240
[83][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 254 bits (648), Expect = 3e-66
Identities = 122/164 (74%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEI MNL EIVL+SN+YG ++A I +GPGYITA+DIILPP+VEI+DN QHI
Sbjct: 77 IIGIEESVHEIFMNLKEIVLKSNMYGIQDASISFKGPGYITAQDIILPPSVEIVDNRQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +TEP+ LCIELKIERNRGY +K NF+D SY IDA FMPV N N+SIHSY NGNEKQ
Sbjct: 137 ANVTEPVHLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++AS+NLI LFIPFLH EE+ F+LE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASQNLIELFIPFLHAEEDNFHLE 240
[84][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 253 bits (646), Expect = 5e-66
Identities = 122/159 (76%), Positives = 139/159 (87%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEIL+NL EIVLRSN+YG R+A IC +GP Y+TA+DII PP+VEI+D TQHI
Sbjct: 77 IIGIEESVHEILLNLKEIVLRSNIYGVRDASICARGPKYVTAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCI L+I R+RGY K + N ++ SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 137 ANLTEPIDLCIGLQIRRDRGYRTKPTTNSQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 235
[85][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 252 bits (643), Expect = 1e-65
Identities = 126/164 (76%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DIILPP VEI+DNTQHI
Sbjct: 77 IMGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEILDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+L I L+IE+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN +
Sbjct: 137 ASLTEPIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--K 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+L IPFLH +EE LE
Sbjct: 195 EILFLEIWTNGSLTPKEALYEASRNLIDLLIPFLHTKEENLNLE 238
[86][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 247 bits (631), Expect = 3e-64
Identities = 123/163 (75%), Positives = 140/163 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT +A IC++GP ++TA+DIILPP V+I+DNTQHI
Sbjct: 77 IGGIQESVHEILMNLKEIVLRSNLYGTCDASICIKGPRHVTAQDIILPPHVQIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID I LKIERNRGY K+ +F+D YPIDA+FMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDFFIGLKIERNRGYFNKVDLHFDDGIYPIDALFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+A+R LI+ FIPF H+EEE YL
Sbjct: 195 EILFLEIWTNGSLTPKEALHEAARILIDFFIPFFHMEEENLYL 237
[87][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 247 bits (630), Expect = 3e-64
Identities = 122/164 (74%), Positives = 140/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEI +NL EIVL NLYG R+A ICV+GP Y+TA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVHEIFINLKEIVL--NLYGVRDASICVRGPRYVTAQDIISPPSVEIVDTTQHI 134
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDL IEL+I+R+RGY + +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQ
Sbjct: 135 ANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE + E
Sbjct: 195 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 238
[88][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 246 bits (628), Expect = 6e-64
Identities = 124/166 (74%), Positives = 142/166 (85%), Gaps = 2/166 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRSNLYGT +A I V+GP +TA+DII PP+V+++D TQHI
Sbjct: 77 IVGIEESVHQILMNLKEIVLRSNLYGTCDASIFVRGPRCVTAQDIISPPSVKMVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSY--PIDAVFMPVENANHSIHSYGNGNE 141
A+LTEPIDLCI L+IER+RGY +K NN +D SY PI+AV MPV NANHSIHSYGNGNE
Sbjct: 137 ASLTEPIDLCIGLQIERDRGYRMKTPNNDQDGSYPIPIEAVSMPVRNANHSIHSYGNGNE 196
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
KQEILFLEIWTNGSLTPKEALH+AS NLI+LFIPFLH EEE LE
Sbjct: 197 KQEILFLEIWTNGSLTPKEALHEASHNLIDLFIPFLHGEEEDINLE 242
[89][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 244 bits (622), Expect = 3e-63
Identities = 120/167 (71%), Positives = 142/167 (85%), Gaps = 3/167 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQESV+EI+MNL EIVLRSNLYGTR+A ICV+GP +TA+DIILPP+V I+DNTQHI
Sbjct: 77 LVGIQESVYEIVMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSVAIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKM---SNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
TLTEPID C+ L+IERNRGYS+K+ +N+ +DR YPIDAVFMPV+N NHSIH+Y NG+
Sbjct: 137 VTLTEPIDFCVGLQIERNRGYSMKIPMPTNSHDDRGYPIDAVFMPVKNVNHSIHAYENGS 196
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
E+LF EIWTNGSLTPKEAL +ASR LINLFIPFLH EEE +LE
Sbjct: 197 --HEMLFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENSHLE 241
[90][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 243 bits (620), Expect = 5e-63
Identities = 118/159 (74%), Positives = 138/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D +Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTSQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[91][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 243 bits (619), Expect = 6e-63
Identities = 118/159 (74%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[92][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 242 bits (618), Expect = 8e-63
Identities = 117/164 (71%), Positives = 141/164 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVHEILMNL EI++RS+LYGTR+A ICV+GP Y+TA+DII PP+V+I+D TQHI
Sbjct: 77 IVGIEESVHEILMNLKEIIVRSDLYGTRDAFICVRGPKYVTAQDIISPPSVKIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A++TEPI+ CI L+IERNRGY + +N +D SYPIDAV MPV NAN+SI YGN NEKQ
Sbjct: 137 ASITEPINFCIGLEIERNRGYRTRTTN--QDASYPIDAVSMPVRNANYSIQCYGNENEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EE +L+
Sbjct: 195 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEERDLHLD 238
[93][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 242 bits (617), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVXMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[94][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[95][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[96][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[97][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[98][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[99][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[100][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[101][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[102][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[103][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[104][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[105][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[106][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[107][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDRAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[108][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[109][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[110][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 241 bits (616), Expect = 1e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[111][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLRIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[112][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDXAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[113][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 116/159 (72%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A IC++GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICIKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[114][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[115][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPKYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELIKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[116][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 241 bits (615), Expect = 2e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNLNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[117][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 241 bits (614), Expect = 2e-62
Identities = 120/163 (73%), Positives = 139/163 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLY + +A IC++GP ++TA+DIILPP V+I+DNTQHI
Sbjct: 77 IGGIQESVHEILMNLKEIVLRSNLYESCDASICIKGPRHVTAQDIILPPHVQIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID I LKIERNRGY K+ +F+D SYPIDA+FMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDFFIGLKIERNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+++R LI+ FIPF +EEE YL
Sbjct: 195 EILFLEIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLYL 237
[118][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 241 bits (614), Expect = 2e-62
Identities = 119/159 (74%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DII PP+VEI+D TQHI
Sbjct: 77 IVGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIISPPSVEIVDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPIDLCIEL+I+R+RGY + N +D SYPIDAV MPV N N+SI+S GN NEK
Sbjct: 137 ANLTEPIDLCIELQIKRDRGYHTEPRKNSQDGSYPIDAVSMPVRNVNYSIYSCGNENEKY 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 235
[119][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 241 bits (614), Expect = 2e-62
Identities = 120/163 (73%), Positives = 139/163 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLY + +A IC++GP ++TA+DIILPP V+I+DNTQHI
Sbjct: 77 IGGIQESVHEILMNLKEIVLRSNLYESCDASICIKGPRHVTAQDIILPPHVQIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID I LKIERNRGY K+ +F+D SYPIDA+FMPV+NANHSIHSY GNEKQ
Sbjct: 137 AWLTEPIDFFIGLKIERNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSY--GNEKQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
EILFLEIWTNGSLTPKEALH+++R LI+ FIPF +EEE YL
Sbjct: 195 EILFLEIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLYL 237
[120][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 240 bits (613), Expect = 3e-62
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+ EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D TQ I
Sbjct: 77 IVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPID CIEL+I+R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK
Sbjct: 137 ANLREPIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PF+H EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEE 235
[121][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 240 bits (613), Expect = 3e-62
Identities = 118/159 (74%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[122][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 240 bits (612), Expect = 4e-62
Identities = 115/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+ EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D TQ I
Sbjct: 77 IVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EP+D CIEL+I+R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK
Sbjct: 137 ANLREPVDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PF+H EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEE 235
[123][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 239 bits (611), Expect = 5e-62
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VE +D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVETVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[124][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 239 bits (610), Expect = 7e-62
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A I V+GP YITA+DIILPP+VEI+D +Q I
Sbjct: 82 IAGIEESVQEILLNLKEIVLRSNLYGVRDASISVKGPRYITAQDIILPPSVEIVDTSQPI 141
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 142 ANLTEPIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 201
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 202 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 240
[125][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 239 bits (610), Expect = 7e-62
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLXEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[126][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 239 bits (610), Expect = 7e-62
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDA MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAESMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[127][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 238 bits (608), Expect = 1e-61
Identities = 115/159 (72%), Positives = 135/159 (84%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+ EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EPID CIEL+I+R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK
Sbjct: 137 ANLREPIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PF+H EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEE 235
[128][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 238 bits (608), Expect = 1e-61
Identities = 115/159 (72%), Positives = 135/159 (84%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+ EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D TQ I
Sbjct: 77 IVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L EP+D CIEL+I+R+R Y ++ N +D SYPIDAVFMPV N N+SI S GNGNEK
Sbjct: 137 ANLREPVDFCIELQIKRDRAYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 235
[129][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 238 bits (607), Expect = 2e-61
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV M V N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMXVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[130][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 238 bits (606), Expect = 2e-61
Identities = 115/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A IC++GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICIKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNG EK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGIEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[131][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 237 bits (605), Expect = 3e-61
Identities = 117/159 (73%), Positives = 135/159 (84%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CIEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI GNGNEK
Sbjct: 137 ANLTEPIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFYCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[132][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 237 bits (605), Expect = 3e-61
Identities = 115/159 (72%), Positives = 136/159 (85%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP ITA+DIILPP+VE++D Q I
Sbjct: 77 IAGIEESVQEILVNLKEIVLRSNLYGVRDASICVKGPRCITAQDIILPPSVEVVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIQLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[133][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 237 bits (604), Expect = 3e-61
Identities = 117/165 (70%), Positives = 140/165 (84%), Gaps = 3/165 (1%)
Frame = -1
Query: 488 GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIAT 309
GIQESV+EI+MNL EIVLRS+LYGTR+A ICV+GP +TA+DIILPP+V I+DNTQHI T
Sbjct: 79 GIQESVYEIVMNLKEIVLRSSLYGTRDASICVRGPRDVTAQDIILPPSVSIVDNTQHIVT 138
Query: 308 LTEPIDLCIELKIERNRGYSLKM---SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
LTEPI+ C+ L+IERNRGYSL++ +N+ ++R YPIDAVFMPV+N NHSIHSY NG+
Sbjct: 139 LTEPIEFCVALQIERNRGYSLRIPTPNNSHDERGYPIDAVFMPVKNVNHSIHSYENGS-- 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
E+LF EIWTNGSLTPKEAL +ASR LINLFIPFLH EEE + E
Sbjct: 197 HEMLFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEEKPHFE 241
[134][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 237 bits (604), Expect = 3e-61
Identities = 117/164 (71%), Positives = 142/164 (86%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVH+ILMNL EIVL+SNLYGT +A + ++GP Y+TA+DIILPP VEI+D+TQHI
Sbjct: 77 IAGIQESVHDILMNLKEIVLKSNLYGTCDASLYIKGPRYVTAQDIILPPHVEIVDSTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+LCI LKIERNRGY +K F++ +Y +DAVFMPV N NHSI+SY GNEK+
Sbjct: 137 ASLTEPINLCIGLKIERNRGYLIKAHPPFQNETYSLDAVFMPVLNVNHSIYSY--GNEKK 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
EILFLEIWTNGSLTPKEALH+A++NL++LFIPFL +EEE LE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEAAQNLMDLFIPFLQMEEENLNLE 238
[135][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 236 bits (603), Expect = 5e-61
Identities = 115/159 (72%), Positives = 135/159 (84%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEPID CI+L+I+R+RGY ++ N++D SYPI V MPV N N+SI S GNGNEK
Sbjct: 137 ANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIXXVSMPVRNVNYSIFSCGNGNEKH 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEE 235
[136][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 236 bits (602), Expect = 6e-61
Identities = 121/167 (72%), Positives = 138/167 (82%), Gaps = 3/167 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES++EILMNL EIVLRSNL GTR+A ICV+GP +TA+DIILP + I+DNTQHI
Sbjct: 77 IVGIQESIYEILMNLKEIVLRSNLDGTRDASICVRGPRDVTAQDIILPNSAAIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLK--MSNNF-EDRSYPIDAVFMPVENANHSIHSYGNGN 144
TLTEPID CI L+I+RNRGYS K M NF +DR YPIDAVF+PV+N NHSIHSY NG+
Sbjct: 137 VTLTEPIDFCIGLQIDRNRGYSRKIPMPTNFHDDRGYPIDAVFLPVKNVNHSIHSYENGS 196
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
E+LFLEIWTNGSLTPKEAL +ASR LINLFIPFLH EEE F+ E
Sbjct: 197 --HEMLFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFHFE 241
[137][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 236 bits (601), Expect = 8e-61
Identities = 122/169 (72%), Positives = 140/169 (82%), Gaps = 6/169 (3%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+AGI+ES++EILMNL EIVLRSNLYGTR+A ICV+GP +TA+DIILPP+ I+DNTQHI
Sbjct: 77 MAGIKESIYEILMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSTAIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKM---SNNF-EDRSY--PIDAVFMPVENANHSIHSYG 153
TLTEPID C+ELKIER RGYS+K+ +N F D Y PIDAVFMPV N NHSI+SY
Sbjct: 137 VTLTEPIDFCVELKIERGRGYSIKIPMPTNPFHHDSGYPIPIDAVFMPVRNVNHSIYSYK 196
Query: 152 NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
G+ +EILFLEIWTNGSLTPKEAL +ASR LINLFIPFLH EEE FYL
Sbjct: 197 RGS--REILFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFYL 243
[138][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 234 bits (597), Expect = 2e-60
Identities = 118/167 (70%), Positives = 136/167 (81%), Gaps = 4/167 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ES++EILMNL EIVLRSNLYGTR+A ICV+GP +TA+DIILPP+ I+DNTQHI
Sbjct: 77 IAGIKESIYEILMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSTAIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFE----DRSYPIDAVFMPVENANHSIHSYGNG 147
TLTEPID C+ LKIER RGYS+K+ + D +YPIDAVFMPV N NHSIHSY G
Sbjct: 137 FTLTEPIDFCVGLKIERGRGYSIKIPMPTDLFHHDSAYPIDAVFMPVRNVNHSIHSYERG 196
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYL 6
+ E+LFLEIWTNGSLTPKEAL +ASR LINL +PFLH EEE FYL
Sbjct: 197 S--HEMLFLEIWTNGSLTPKEALREASRKLINLLMPFLHAEEENFYL 241
[139][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 233 bits (594), Expect = 5e-60
Identities = 116/159 (72%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG RNA ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K
Sbjct: 117 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 215
[140][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 233 bits (594), Expect = 5e-60
Identities = 116/159 (72%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG RNA ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K
Sbjct: 117 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 215
[141][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 233 bits (593), Expect = 7e-60
Identities = 119/158 (75%), Positives = 132/158 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVHEILMNL EIVLRSNLYGT A ICV+GPGY+TA+DII PP VEI+DNTQHI
Sbjct: 77 IRGIQESVHEILMNLKEIVLRSNLYGTCEASICVKGPGYVTAQDIISPPYVEIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LTEPI+L I L+IE+NR LK N F+D SY I AV MPV + N+SIHS GNG KQ
Sbjct: 137 ASLTEPIELIIRLQIEKNRFIQLKERNTFQDGSYAIGAVLMPVRHMNYSIHSSGNG--KQ 194
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
EILFLEIWTNGSLTPKEALH+A RNLI+LFIPFLH EE
Sbjct: 195 EILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEE 232
[142][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 232 bits (592), Expect = 9e-60
Identities = 116/159 (72%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG RNA ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K
Sbjct: 117 ANLTEPEDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 215
[143][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 231 bits (589), Expect = 2e-59
Identities = 115/159 (72%), Positives = 134/159 (84%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R+A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP+D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K
Sbjct: 117 ANLTEPMDFRIELRIKRDRGYHTEVRKNAQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 215
[144][TOP]
>UniRef100_UPI0000E123FA Os05g0292500 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E123FA
Length = 351
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 186 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 245
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 246 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 305
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 306 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 344
[145][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 165 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 224
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 225 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 284
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 285 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 323
[146][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 137 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 235
[147][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 186 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 245
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 246 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 305
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 306 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 344
[148][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 117 ANLTEPTDFHIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 215
[149][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 229 bits (585), Expect = 6e-59
Identities = 114/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 77 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 137 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 235
[150][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 228 bits (582), Expect = 1e-58
Identities = 113/159 (71%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 186 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 245
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN +
Sbjct: 246 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNARY 305
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 306 EILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEE 344
[151][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 228 bits (581), Expect = 2e-58
Identities = 112/167 (67%), Positives = 136/167 (81%), Gaps = 3/167 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQES++EILMNL EIVLRS+LYGTR+A ICV+GP +TA+DIILP + I+DNTQHI
Sbjct: 77 LVGIQESIYEILMNLKEIVLRSHLYGTRDASICVRGPRDVTAQDIILPTSATIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLK---MSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
T+TEPID C+ L+IERNRGY ++ ++N +DR YPID+VFMPV+N NHSIHSY NG
Sbjct: 137 VTITEPIDFCVGLQIERNRGYFIQIPMLTNLHDDRGYPIDSVFMPVKNVNHSIHSYENG- 195
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
+LFLEIWTNGSLTPKEAL +ASR L NLFIPFLH EE+ F+ E
Sbjct: 196 -IHAMLFLEIWTNGSLTPKEALREASRKLSNLFIPFLHAEEQNFHFE 241
[152][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 227 bits (579), Expect = 3e-58
Identities = 113/159 (71%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+ESV EIL+NL EIVLRSNLYG R A ICV+GP YITA+DIILPP+VEI+D Q I
Sbjct: 57 IAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPI 116
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LTEP D IEL+I+R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K
Sbjct: 117 ANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKY 176
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSLTP EAL++ASRNLI+LF+PFLH EEE
Sbjct: 177 EILFLEIWTNGSLTPMEALYEASRNLIDLFLPFLHTEEE 215
[153][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 226 bits (577), Expect = 5e-58
Identities = 114/167 (68%), Positives = 134/167 (80%), Gaps = 3/167 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQES++EILMNL EIVLRS+LYGTR+A ICV+GP +T++DIILP I+DNTQHI
Sbjct: 77 LVGIQESIYEILMNLKEIVLRSHLYGTRDASICVRGPRDVTSQDIILPTFATIVDNTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLK---MSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
TLTEPID C+ L+IERNRGY ++ +SN +DR YPIDAVFMPV+N NHSIHSY NG
Sbjct: 137 VTLTEPIDFCVGLQIERNRGYFIQIPMLSNLHDDRGYPIDAVFMPVKNVNHSIHSYENG- 195
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLE 3
+LFLEIWTNGSLTPKEAL ASR LINLFIPFLH EE+ + E
Sbjct: 196 -IHAMLFLEIWTNGSLTPKEALRGASRKLINLFIPFLHAEEQNCHFE 241
[154][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 223 bits (567), Expect = 7e-57
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITFDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[155][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[156][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[157][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[158][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[159][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[160][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[161][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPKNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[162][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 222 bits (565), Expect = 1e-56
Identities = 109/159 (68%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[163][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 221 bits (562), Expect = 3e-56
Identities = 108/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+IL+NL EIVLRS+ YGTR A IC+ GP +TA+DIILPP+V IID TQHI
Sbjct: 77 IIGIEESVHDILINLKEIVLRSDPYGTREASICIVGPRNVTAQDIILPPSVRIIDATQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+LT+ I I L IE++RGY ++ N++D +PIDAVFMPV NAN+SIHSYGNGN+ Q
Sbjct: 137 ASLTKSITFDIRLWIEKDRGYRIQSPKNYQDGIFPIDAVFMPVRNANYSIHSYGNGNDIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLEIWTNGSL P+EAL++ASRNLI+LFIPFL EE+
Sbjct: 197 EILFLEIWTNGSLAPREALYRASRNLIDLFIPFLRAEEQ 235
[164][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 220 bits (561), Expect = 3e-56
Identities = 108/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + SNN++D +PIDAVFMPV + N+SIHSYG+GNE Q
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[165][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 219 bits (559), Expect = 6e-56
Identities = 107/159 (67%), Positives = 133/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGVREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I+L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIKLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[166][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 218 bits (556), Expect = 1e-55
Identities = 107/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[167][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 218 bits (556), Expect = 1e-55
Identities = 107/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[168][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 218 bits (556), Expect = 1e-55
Identities = 107/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[169][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 218 bits (556), Expect = 1e-55
Identities = 107/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[170][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 218 bits (556), Expect = 1e-55
Identities = 107/159 (67%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[171][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 218 bits (555), Expect = 2e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITFDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+ FIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDFFIPFLHGEEQ 235
[172][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 218 bits (554), Expect = 2e-55
Identities = 107/159 (67%), Positives = 130/159 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A IC+ GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIRGASICIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL +ASR LI LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALSEASRILIELFIPFLHGEEQ 235
[173][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 217 bits (553), Expect = 3e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITFDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+L IPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQ 235
[174][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 217 bits (552), Expect = 4e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIV RS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[175][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 217 bits (552), Expect = 4e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIV RS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[176][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 217 bits (552), Expect = 4e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIV RS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[177][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 216 bits (551), Expect = 5e-55
Identities = 106/159 (66%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIVLRS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+L IPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQ 235
[178][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 215 bits (548), Expect = 1e-54
Identities = 105/159 (66%), Positives = 130/159 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIV RS+ YG R A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV + N+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[179][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 215 bits (547), Expect = 1e-54
Identities = 105/159 (66%), Positives = 130/159 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL EIV RS+ YG R A I + GP +TA+DIILPP+V+ ID TQHI
Sbjct: 77 IIGIEESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKTIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[180][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 214 bits (544), Expect = 3e-54
Identities = 105/159 (66%), Positives = 130/159 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+ILMNL IVLRS+ YG A I + GP +TA+DIILPP+V+IID TQHI
Sbjct: 77 IIGIEESVHDILMNLKXIVLRSDSYGIXEASIYIVGPRNVTAQDIILPPSVKIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A LT+ I I L+IE+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +
Sbjct: 137 ARLTKSITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+LFLEIWTNG LTP+EAL++ASRNLI+LFIPFLH EE+
Sbjct: 197 EVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ 235
[181][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 211 bits (536), Expect = 3e-53
Identities = 102/161 (63%), Positives = 132/161 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVH++L+NL EIVLRS+ Y T+ A I + GP +TA+DIILPP+V+IID TQ+I
Sbjct: 77 ILGIQESVHDVLINLGEIVLRSDSYETQKAFISILGPKKVTAQDIILPPSVKIIDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+ I L IELKIE++ GY ++ D ++P+DAVFMP+ N N+S+HS+ NGNE Q
Sbjct: 137 ATVTKAIHLDIELKIEKDFGYRIEDPIKSADGNFPVDAVFMPIRNVNYSVHSFENGNETQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETF 12
EILFLEIWTNGS+TPKEAL++ASR+LINLFIPFLH E++ F
Sbjct: 197 EILFLEIWTNGSVTPKEALYEASRSLINLFIPFLHAEKKEF 237
[182][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 206 bits (525), Expect = 5e-52
Identities = 101/159 (63%), Positives = 132/159 (83%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVH+IL+NL EIVLRSN Y T+ A I + GP +TA+DIILPP+V+IID TQ+I
Sbjct: 77 IAGIQESVHDILINLKEIVLRSNSYETQKAFISILGPKKVTAQDIILPPSVKIIDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
ATLT+ I L IEL+IE++ GY ++ S D +PIDA+FMP+ NAN+S+HS+ + N+ Q
Sbjct: 137 ATLTKTIHLDIELEIEKDCGYRIQDSIKSTDGHFPIDAIFMPIRNANYSVHSFEHENKTQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+EIWTNGS+TPKEAL++ASR+LI+LFIPFLH E++
Sbjct: 197 EILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHAEKK 235
[183][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 203 bits (516), Expect = 6e-51
Identities = 100/159 (62%), Positives = 131/159 (82%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVH+IL+NL EIVL+SN T+ A I + GP ITA+DIILPP+V+IID TQ+I
Sbjct: 77 IVGIQESVHDILINLKEIVLKSNSSETQKAFISILGPKKITAQDIILPPSVKIIDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+PI L IEL+IE++ GY ++ S D +PIDA+FMP+ NAN+S+HS+ N N+ Q
Sbjct: 137 ATITKPIHLDIELEIEKDCGYRIQDSVKSIDGYFPIDAIFMPIRNANYSVHSFENNNKIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+EIWTNGS+TPKEAL++ASR+LI+LFIPFLH E++
Sbjct: 197 EILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHPEKK 235
[184][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 200 bits (508), Expect = 5e-50
Identities = 97/159 (61%), Positives = 129/159 (81%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQES H+IL+NL EIVL+SN Y T+ A + + GP ITA+DIILPP+V+IID TQ+I
Sbjct: 77 IVGIQESAHDILINLKEIVLKSNSYETQKAFLSILGPKKITAQDIILPPSVKIIDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+PI L IEL+I+++ GY + S D + IDA+FMP+ NAN+S+HS+ N N+ Q
Sbjct: 137 ATITKPIHLDIELEIDKDCGYRIXDSVKSIDGYFSIDAIFMPIRNANYSVHSFENNNKIQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+EIWTNGS+TPKEAL++ASR+LI+LFIPFLH E++
Sbjct: 197 EILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHTEKK 235
[185][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 195 bits (495), Expect = 2e-48
Identities = 93/159 (58%), Positives = 128/159 (80%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+++IL+N EIVLRS+ Y T+ A I + GP ITA DI+LPP+V+ ID++QHI
Sbjct: 77 IIGIEESINDILINFKEIVLRSDSYETQKAYISITGPKDITAEDILLPPSVQAIDDSQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+ I L IE++I+++RGY ++ S + + IDAVFMP+ AN+S+HS+GN + Q
Sbjct: 137 ATITKDITLDIEIEIQKDRGYRIQDSKESQAGEFFIDAVFMPIRKANYSVHSFGNNKKFQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+EIWT+GSLTPKEAL++ASRNLI+LF+PFLH EEE
Sbjct: 197 EILFIEIWTDGSLTPKEALYEASRNLIDLFLPFLHTEEE 235
[186][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 194 bits (493), Expect = 3e-48
Identities = 98/169 (57%), Positives = 123/169 (72%), Gaps = 10/169 (5%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+HEILMNL EIVLRS+ YG R I V GP +TA+DI+LPP+V IID TQHI
Sbjct: 77 IIGIEESIHEILMNLKEIVLRSDAYGIREGSIHVVGPKKVTAQDIMLPPSVRIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS----------YPIDAVFMPVENANHSI 165
A + + I L I L+IE+ RGY ++ NN+ + +PIDA F PV+N N+SI
Sbjct: 137 ANINKSITLDISLQIEKGRGYIIQNPNNYNPKDEIFAIDAAFVFPIDAAFAPVQNVNYSI 196
Query: 164 HSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
HSY + NE QEILFLEIWTNG L PKEAL++ASRNLI+ F+PFL+ +EE
Sbjct: 197 HSYWSENETQEILFLEIWTNGGLAPKEALYEASRNLIDFFLPFLNAKEE 245
[187][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 192 bits (488), Expect = 1e-47
Identities = 95/157 (60%), Positives = 125/157 (79%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGIQESVH+I +N EIVL SN T+ A I + GP ITA+DIILPP+V+IID Q+I
Sbjct: 77 IAGIQESVHDISINSKEIVLESNSSETQKAFISILGPKKITAQDIILPPSVKIIDGKQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
ATLT+ I L IEL+IE++ GY ++ SN + + IDA+FMP+ NAN+S+HS+ N N+ Q
Sbjct: 137 ATLTKAIQLDIELEIEKDYGYRIQNSNKSTNSHFFIDAIFMPIRNANYSVHSFENENKTQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
E+LF+EIWTNGS+TPK+AL++ASR+LI+LFIPFLH E
Sbjct: 197 EMLFIEIWTNGSITPKDALYEASRSLIDLFIPFLHAE 233
[188][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 191 bits (486), Expect = 2e-47
Identities = 91/159 (57%), Positives = 124/159 (77%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVH+IL+NL EIVL+SN Y T+ A I + GP +TA DI+LP +VE+ID TQHI
Sbjct: 77 IMGIQESVHDILINLKEIVLKSNSYKTQEASISILGPKRVTAEDIVLPSSVEVIDATQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+ + I+L I ++RGY ++ +ED ++ ++A F P+ NAN+S+HS+ N EKQ
Sbjct: 137 ATITKAVYFNIKLGIRKDRGYRIENPVKYEDGNFAVNAAFTPIRNANYSVHSFENEKEKQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+E+WTNGSLTPKEAL +AS++LINLFIP LH ++E
Sbjct: 197 EILFIEVWTNGSLTPKEALREASQSLINLFIPLLHEKKE 235
[189][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 191 bits (485), Expect = 2e-47
Identities = 98/161 (60%), Positives = 125/161 (77%), Gaps = 2/161 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRS--NLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQ 321
I GIQESV +IL+NL EIVL+S N T+ A + + GP +TARDII PP+VE+ID TQ
Sbjct: 78 ILGIQESVRDILINLKEIVLKSKSNSCETQKAFLSIFGPKEVTARDIIFPPSVEVIDTTQ 137
Query: 320 HIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNE 141
+IATLT+ I L IELKIE++ GY + S D + +DAVF P+ NAN+S+HS+ N NE
Sbjct: 138 YIATLTKAIHLDIELKIEKDCGYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNE 197
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
QEILF+EIWTNGS+TPKEAL++ASR+LI+LFIPFLH E+E
Sbjct: 198 TQEILFIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKE 238
[190][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 191 bits (484), Expect = 3e-47
Identities = 97/161 (60%), Positives = 125/161 (77%), Gaps = 2/161 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRS--NLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQ 321
I GIQESV +IL+NL EIVL+S N T+ A + + GP +TARDI+ PP+VE+ID TQ
Sbjct: 78 ILGIQESVRDILINLKEIVLKSKSNSCETQKAFLSIFGPKEVTARDIVFPPSVEVIDTTQ 137
Query: 320 HIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNE 141
+IATLT+ I L IELKIE++ GY + S D + +DAVF P+ NAN+S+HS+ N NE
Sbjct: 138 YIATLTKAIHLDIELKIEKDCGYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNE 197
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
QEILF+EIWTNGS+TPKEAL++ASR+LI+LFIPFLH E+E
Sbjct: 198 TQEILFIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKE 238
[191][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 190 bits (483), Expect = 4e-47
Identities = 98/159 (61%), Positives = 119/159 (74%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+I +NL IVL+S+ YG R A I GP +TA+DIILPP+V IID TQHI
Sbjct: 77 IMGIEESVHDISINLRGIVLQSDPYGIREASIYSVGPRDVTAQDIILPPSVRIIDTTQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A+L E I I +I ++RGY ++ NN D + DAV MPV NAN+SIHSYGNGNE Q
Sbjct: 137 ASLKESITSDIRSQIGKDRGYRIQSPNNSRDGIFSTDAVSMPVRNANYSIHSYGNGNEMQ 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF EIWTNGSL P EAL++ASRNLI+LFIPF+ EE+
Sbjct: 197 EILFSEIWTNGSLAPGEALYEASRNLIDLFIPFMRAEEQ 235
[192][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 186 bits (473), Expect = 5e-46
Identities = 85/159 (53%), Positives = 123/159 (77%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+AGIQE++H+IL+NL EIVLRS+ G + A++ V GP +TA DI LPP+V++ID++Q+I
Sbjct: 77 VAGIQETIHDILVNLKEIVLRSDSDGNQKAILSVTGPKRVTAGDISLPPSVKVIDDSQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
T+T+PI + IEL IE + GY ++ N + D +P+DAVFMPV N N+S+H +G+G E +
Sbjct: 137 VTITQPISVNIELNIECDCGYRIESLNEYRDGEFPVDAVFMPVRNVNYSVHPFGSGKEMR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILF+E+WTNGSLTP EA+ +AS++ I+L PFLH + E
Sbjct: 197 EILFIEVWTNGSLTPTEAISKASKSSIDLLSPFLHTKHE 235
[193][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 180 bits (456), Expect = 5e-44
Identities = 86/155 (55%), Positives = 120/155 (77%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ES+H+IL+NL EI+LRS+ + A ICV GP +TARDI + +IDNTQ++
Sbjct: 78 INGIRESIHDILINLKEIILRSDSPEPQKAYICVSGPSEVTARDIQGSSLIHVIDNTQYV 137
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T I L IEL IE++RGY ++ S + + +PIDAVFMP+ NAN+S+HS+G+ + +
Sbjct: 138 ATITGKISLDIELDIEKDRGYRMENSRKYREGFFPIDAVFMPIRNANYSVHSFGSREKTK 197
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLH 30
EIL LEIWTNGSLTP++AL++ASRNLI+LFIP ++
Sbjct: 198 EILLLEIWTNGSLTPEKALYEASRNLIDLFIPSMN 232
[194][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 174 bits (440), Expect = 4e-42
Identities = 82/159 (51%), Positives = 118/159 (74%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQE++H+I +NL E V RS+ ++ A + V GP +TA D LPP+V+IID++Q+I
Sbjct: 77 ITGIQETIHDISVNLKETVPRSDSNDSKEAFLSVTGPKRVTAGDTSLPPSVKIIDDSQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
T+T+PI + IE +IE++ GY ++ N + D +P+DAV MPV N N+S+H +G+G E +
Sbjct: 137 VTITQPISVNIESRIEKDCGYRIEEFNGYRDGEFPVDAVPMPVRNVNYSVHPFGSGREMR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EI F+EIWTNGS TP EAL +AS+NLI+L IPFLH++ E
Sbjct: 197 EISFIEIWTNGSPTPNEALCEASKNLIDLLIPFLHMKHE 235
[195][TOP]
>UniRef100_A6BM49 RNA polymerase alpha subunit n=2 Tax=Spermatophyta
RepID=A6BM49_BRANA
Length = 326
Score = 174 bits (440), Expect = 4e-42
Identities = 85/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
++GI+ESVH+IL+NL EIVL+S LYG A IC GP +TA+DIILP +++IID TQHI
Sbjct: 78 MSGIKESVHDILLNLKEIVLKSELYGIHKASICTVGPRNVTAQDIILPSSIKIIDGTQHI 137
Query: 314 ATLTEPIDLCIELKIERNRGYSL--KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNE 141
A+LT+ + + L IERN+GY++ + S ++ +PIDA MPV N N SIHSY + N+
Sbjct: 138 ASLTKSVPFNVMLTIERNQGYAIPSQSSRRHKNGLFPIDAPCMPVRNVNFSIHSYKSEND 197
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+E+L EIWTNG LTP+EA ++A LI+L +P LH+EE+
Sbjct: 198 IREMLIFEIWTNGGLTPREAFYEACWKLIDLIVPLLHMEED 238
[196][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 171 bits (432), Expect = 3e-41
Identities = 86/159 (54%), Positives = 120/159 (75%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GI+ES+H+IL+NL EIVL+S+ Y T+ A I + GP +TA DI+LP +V+IID +QHI
Sbjct: 77 LVGIKESIHDILINLKEIVLQSDSYETQKASISILGPRDVTAGDILLPTSVKIIDASQHI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T I L +EL+IER+ GY + + IDA+F P+ NAN+SIHS+ + N+ +
Sbjct: 137 ATITTAIPLDVELRIERDCGYRTLNLKESQSGEFFIDALFTPIRNANYSIHSFESNNKVR 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
EILFLE+WTNGSLTP AL +ASR+LI+LFI FL++E+E
Sbjct: 197 EILFLEVWTNGSLTPGAALSEASRDLIDLFIIFLNMEKE 235
[197][TOP]
>UniRef100_B7ZII6 RNA polymerase alpha chain n=1 Tax=Ephedra equisetina
RepID=B7ZII6_EPHEU
Length = 258
Score = 170 bits (431), Expect = 4e-41
Identities = 83/159 (52%), Positives = 116/159 (72%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
+I GI+ESVH+ILMNL +IVLRS LYG A IC GP +TA+DIILP +++IID+TQH
Sbjct: 77 SIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQDIILPSSIQIIDDTQH 136
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IA+LT+ I + LKIE+ + Y+++ +D +PID V +PV+N N SIHSY + +
Sbjct: 137 IASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPVQNVNFSIHSYKSSDNI 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
QE+L EIWTNG LTP+E +++A +L++L IP L VE+
Sbjct: 197 QEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQ 235
[198][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 169 bits (429), Expect = 7e-41
Identities = 87/166 (52%), Positives = 124/166 (74%), Gaps = 2/166 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G+QES+H+IL+NL EIVL+S + + A I V GP ITA+DI P ++I+ Q+I
Sbjct: 77 IIGLQESIHDILINLKEIVLKSESFEPQKAYISVLGPKKITAQDIKGPSCIKIMIIAQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
ATL + I L IEL IE++RGY ++ +++ +P+DAVFMP+ NAN+S+HS+ + + +
Sbjct: 137 ATLNKDILLEIELNIEKDRGYRIENLQKYQEGLFPVDAVFMPIRNANYSVHSFESEKKIK 196
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE--EETFYLE 3
EILFLEIWT+GSLTPKEAL++ASRNLI+LFIP ++ E E+ F +E
Sbjct: 197 EILFLEIWTDGSLTPKEALYEASRNLIDLFIPLINSEKKEKNFGIE 242
[199][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 167 bits (424), Expect = 3e-40
Identities = 84/157 (53%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLY-GTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
I G+QE++H++L+NL EIVLR + + A + V GP +TA D+ LPP VE IDN+Q+
Sbjct: 77 ITGLQETIHDVLVNLKEIVLRGDSKEDIQEAFLSVTGPKEVTAGDLSLPPGVEAIDNSQY 136
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IAT+T+PI L IEL+IE++ GY ++ +PIDAVFMPV N N+SIH +G+G
Sbjct: 137 IATITQPISLTIELEIEKDCGYRIENLAKSGKGQFPIDAVFMPVRNVNYSIHLFGSGRAT 196
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV 27
QEILF+EIWTNGSLTP EAL +AS L++L FL+V
Sbjct: 197 QEILFIEIWTNGSLTPHEALRKASEKLMDLLTTFLYV 233
[200][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 164 bits (415), Expect = 3e-39
Identities = 82/158 (51%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
Frame = -1
Query: 488 GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIAT 309
G++E+ +IL+NL E+V+RS+ + A+I GPG +TA DI+LPP++E+ D TQHIA
Sbjct: 191 GVEETPMDILVNLKELVIRSDSDEPQKAIISAIGPGPVTAGDIVLPPSLEVTDPTQHIAY 250
Query: 308 LTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSY-GNGNEKQE 132
LT+ + L IEL +E+ GY + D + ID+VFMPV NAN+S+HSY + QE
Sbjct: 251 LTKEVSLDIELDVEKGCGYRMGDHTKSGDGRFYIDSVFMPVRNANYSVHSYESEPDVTQE 310
Query: 131 ILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
ILFLEIWTNGS+TP+EALH+A+R LI+LF+PFLH +++
Sbjct: 311 ILFLEIWTNGSITPEEALHEAARCLIDLFLPFLHPKKK 348
[201][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 158 bits (400), Expect = 2e-37
Identities = 78/159 (49%), Positives = 116/159 (72%), Gaps = 2/159 (1%)
Frame = -1
Query: 488 GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIAT 309
GIQESVH+IL+N EIVL+S + A I + GP +TA+DI LP +VE+ID QHIAT
Sbjct: 82 GIQESVHDILINSKEIVLKSKSSEAQKAFISIVGPRRVTAQDIELPTSVEVIDPMQHIAT 141
Query: 308 LTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK--Q 135
+T+ + L IELKIE++ GY + ++D ++ +DAVF P+ + N+SIH + + ++ +
Sbjct: 142 ITKKVKLNIELKIEKDSGYRRQNIVEYKDGNFTVDAVFTPIRSVNYSIHCFESHDKSIMK 201
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E+L EIW+NGS+TP+EA+++ASR+ INLF+PFL E+E
Sbjct: 202 EMLLYEIWSNGSITPEEAIYEASRSSINLFLPFLQAEKE 240
[202][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 150 bits (380), Expect = 3e-35
Identities = 74/152 (48%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++ES+ +IL+NL EIV + T+ I V+GP ITA DI + P +EI+D+ Q I
Sbjct: 74 LTGVRESIQDILLNLKEIVFKGVCDKTQKGFIFVKGPKKITASDIQIEPCIEILDSNQII 133
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGN-GNEK 138
A LTEPID +EL IE++ G+ L+ + S+ IDA+FMP+ N N+SIH G+ K
Sbjct: 134 AHLTEPIDFKVELTIEKSMGFRLQNATQISKDSFSIDAIFMPIRNVNYSIHPVEKAGDWK 193
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFI 42
E+L LEIWTNGS+TPKEA HQAS ++N+F+
Sbjct: 194 SELLILEIWTNGSITPKEAFHQASEKIMNIFL 225
[203][TOP]
>UniRef100_C7B2H8 RNA polymerase alpha chain n=1 Tax=Selaginella moellendorffii
RepID=C7B2H8_9TRAC
Length = 247
Score = 150 bits (378), Expect = 6e-35
Identities = 80/158 (50%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGT-RNALICVQGPGYITARDIILPPAVEIIDNTQH 318
IAG++ESVH+ILMNL EIVL++N + + A I + GP +TA+DI+LPP+V +D TQH
Sbjct: 77 IAGVRESVHDILMNLKEIVLKTNPFSAAQEAHIPIVGPRKVTAQDIVLPPSVGTMDPTQH 136
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGN--GN 144
IAT+T I I L++ER G+ + ++ S P DAVFMP+ +AN+SIH G+ G
Sbjct: 137 IATITRKIHSSIGLRVERGCGFRKRNMIEYQKGSLPPDAVFMPIRHANYSIHRLGSHGGG 196
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLH 30
+E+L LE T+GS TP+EA+++ASRNL NLF PF H
Sbjct: 197 IMKEMLLLEARTDGSPTPREAIYEASRNLANLFSPFPH 234
[204][TOP]
>UniRef100_O98462 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirogyra maxima
RepID=RPOA_SPIMX
Length = 344
Score = 146 bits (369), Expect = 6e-34
Identities = 72/161 (44%), Positives = 109/161 (67%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQES+H+IL+NL ++++++ + + LI + GP +TA DI L + I + HI
Sbjct: 79 LEGIQESIHDILLNLKQVIIKNKICEFQKCLISIIGPKKVTAADIELSQNITISNPYHHI 138
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
AT+T+PI +EL I + RGY ++ N+ +D +P+DA+F PV N N SIH N E+Q
Sbjct: 139 ATITKPIRFQVELIINKGRGYLIQDGNDVQDGYFPVDALFNPVRNVNFSIH---NLAEQQ 195
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETF 12
E L LEIWTNG++TP +AL Q S NLI+LF+P +E++T+
Sbjct: 196 EALILEIWTNGAITPLDALRQGSENLIHLFLPPFGLEDDTY 236
[205][TOP]
>UniRef100_B2Y1Z1 RNA polymerase alpha chain n=1 Tax=Welwitschia mirabilis
RepID=B2Y1Z1_WELMI
Length = 340
Score = 142 bits (357), Expect = 2e-32
Identities = 75/161 (46%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+ESVH+I+MNL EIV R L+G A I GP +TA+DIILPP ++I+D TQHI
Sbjct: 81 ILGIEESVHDIIMNLREIVFRCELHGIHKAYIYTVGPKNVTAQDIILPPFIQIVDGTQHI 140
Query: 314 ATLTEPIDLCIELKIERNRG---YSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
A++T+PI L + LKIE+N G S+ + R P + +MPV + ++++ Y +
Sbjct: 141 ASITKPIHLHVTLKIEKNWGETTESIHPITKYFTRYIPTEIFYMPVRSVTYNVYFYKDEY 200
Query: 143 EKQ--EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV 27
+ +IL E+WTNG LTPKEAL++A LI+L IP L V
Sbjct: 201 DIHIYDILIFELWTNGELTPKEALYEACWRLIDLIIPLLDV 241
[206][TOP]
>UniRef100_Q8M9V7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chaetosphaeridium
globosum RepID=RPOA_CHAGL
Length = 334
Score = 140 bits (354), Expect = 3e-32
Identities = 64/158 (40%), Positives = 108/158 (68%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
+++G+QESVH+IL+NL +I+L S+ G + V GP + A D+ LP ++I++ Q+
Sbjct: 76 SLSGVQESVHDILINLKKIILSSSFSGIFEGFLSVVGPKTVLASDLNLPSFIKIVNPDQY 135
Query: 317 IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK 138
IAT+ +PI+ +++ I++ +GYSLK + + + +D VF+P+ + N+SIHS+ +
Sbjct: 136 IATVNKPINFNLQIYIQKGKGYSLKNPISIKQGFFLVDPVFIPIRSVNYSIHSFEDEKAT 195
Query: 137 QEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
+E L +E+WTNGS+ PKEA+ +AS NL+NLF P + E
Sbjct: 196 KEFLIVEVWTNGSIEPKEAIKEASYNLVNLFTPLVSQE 233
[207][TOP]
>UniRef100_Q32RM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zygnema
circumcarinatum RepID=RPOA_ZYGCR
Length = 356
Score = 139 bits (351), Expect = 8e-32
Identities = 68/157 (43%), Positives = 102/157 (64%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GI+ES+H+IL+NL +IV +S+ + ++ GPG +TA+ I LPP V+++DNTQ+I
Sbjct: 74 LKGIRESIHDILLNLKDIVFKSDTLERQEGILLFNGPGIVTAQHIKLPPVVQVVDNTQYI 133
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A L P + I + +E + + + + +DA PV N N+SIHS G G+ +Q
Sbjct: 134 ARLEMPTSIEIHITLENTKTCTSLNTMPTTKGRFILDAALKPVRNMNYSIHSLGEGDMRQ 193
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
E+L LE+WTNGSLTP+E + QAS+NL +L P L VE
Sbjct: 194 EMLVLEVWTNGSLTPQEVISQASQNLNDLLKPLLKVE 230
[208][TOP]
>UniRef100_Q5EFY5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Andreaea rupestris
RepID=Q5EFY5_9BRYO
Length = 195
Score = 132 bits (332), Expect = 1e-29
Identities = 68/118 (57%), Positives = 89/118 (75%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GIQESVH+IL+N EIVL+SN Y T+ A I + GP ITA+DIILPP+V+IID TQ+I
Sbjct: 77 ILGIQESVHDILINSKEIVLKSNSYETQKAFISILGPKKITAQDIILPPSVKIIDTTQYI 136
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNE 141
ATLT+ I L IE +IE++ GY ++ S D + +DAVFMP+ NAN+SIHS+ N N+
Sbjct: 137 ATLTKAIHLDIESEIEKDCGYRIQDSKKSTDGLFFVDAVFMPIRNANYSIHSFENKNK 194
[209][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 132 bits (332), Expect = 1e-29
Identities = 65/157 (41%), Positives = 107/157 (68%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQE+V +IL+N+ ++ + SN + + A I V GP + A DI+ PP++ + D +Q+I
Sbjct: 178 VDGIQETVQDILLNVRDVAIGSNTHEPQKAFISVMGPRQVIAGDILCPPSLVVPDPSQNI 237
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +T I +E+++E++ GY + + + ID+VFMPV AN+S+HS+ + +
Sbjct: 238 ALVTAAIPFNVEIEVEKDVGYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTR 297
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
EILFLEI+TNGS++P+EAL +A+R+LI+L +P L E
Sbjct: 298 EILFLEIYTNGSISPEEALIEAARSLIDLLLPLLESE 334
[210][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 132 bits (332), Expect = 1e-29
Identities = 65/157 (41%), Positives = 107/157 (68%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GIQE+V +IL+N+ ++ + SN + + A I V GP + A DI+ PP++ + D +Q+I
Sbjct: 265 VDGIQETVQDILLNVRDVAIGSNTHEPQKAFISVMGPRQVIAGDILCPPSLVVPDPSQNI 324
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQ 135
A +T I +E+++E++ GY + + + ID+VFMPV AN+S+HS+ + +
Sbjct: 325 ALVTAAIPFNVEIEVEKDVGYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTR 384
Query: 134 EILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
EILFLEI+TNGS++P+EAL +A+R+LI+L +P L E
Sbjct: 385 EILFLEIYTNGSISPEEALIEAARSLIDLLLPLLESE 421
[211][TOP]
>UniRef100_A7Q481 Chromosome chr9 scaffold_49, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q481_VITVI
Length = 150
Score = 125 bits (313), Expect = 2e-27
Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 4/97 (4%)
Frame = -1
Query: 344 VEIIDNTQH----IATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENA 177
+++I N + IA L +PIDLCI L+I+RN YS+K NNF+D SYPID VFM V+NA
Sbjct: 52 LDLISNNNYSTILIARLKKPIDLCIGLQIKRNCKYSMKRPNNFQDGSYPIDTVFMSVQNA 111
Query: 176 NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQAS 66
NH+IH YGN NE+QEILFL++WTN +LTPKEA H+AS
Sbjct: 112 NHNIHFYGNVNERQEILFLKLWTNKNLTPKEAFHEAS 148
[212][TOP]
>UniRef100_Q2JUJ5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=RPOA_SYNJA
Length = 331
Score = 124 bits (311), Expect = 3e-27
Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 4/164 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EIL+N+ E+VLRSN T+ + QGPG +TA + LP VE+I+ HI
Sbjct: 86 VPGVREDVMEILLNMKELVLRSNAPDTQVGRLVAQGPGEVTAEKLQLPSEVEVINPRHHI 145
Query: 314 ATLTEPIDLCIELKIERNRGY---SLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
ATL E L +E I R RGY S + ID+VFMPV N+++ + G
Sbjct: 146 ATLAEGAILEMEFMIGRGRGYRAVDYSDSKSMAIDFLQIDSVFMPVRKVNYTVEAARVGQ 205
Query: 143 E-KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEET 15
+++ L LEIWTNGSLTP+EAL QA+R L+ LF P V +T
Sbjct: 206 SLEKDRLILEIWTNGSLTPQEALSQAARILVGLFSPLQEVSFDT 249
[213][TOP]
>UniRef100_A2CI44 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chlorokybus
atmophyticus RepID=RPOA_CHLAT
Length = 318
Score = 123 bits (308), Expect = 7e-27
Identities = 61/159 (38%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E+V +IL+NL EIVL++ T+ + VQGP + ARD+ LP ++E++D Q+I
Sbjct: 73 IHGVREAVLDILLNLKEIVLKTQSQETQRGHLSVQGPSTVLARDLQLPSSIELVDPDQYI 132
Query: 314 ATLTEPIDLCIELKIERNRGYSL---KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
AT++ + L +E +E +GY L + F+ PIDAVFMPV N+++ G+
Sbjct: 133 ATISGRVSLNMEFTVEVGKGYQLPDYEKKKTFQVDVLPIDAVFMPVTKVNYTVEENYGGD 192
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV 27
QE + +E+WTNGS+ ++A+ + +INLF P +V
Sbjct: 193 RSQERVIIEVWTNGSINSRQAIDLSVNKIINLFSPLQNV 231
[214][TOP]
>UniRef100_O46914 DNA-directed RNA polymerase subunit alpha n=1 Tax=Guillardia theta
RepID=RPOA_GUITH
Length = 318
Score = 117 bits (294), Expect = 3e-25
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+E V EIL+NL EIV L + + VQGP +TAR LPP +++ID Q+I
Sbjct: 68 INGIREDVLEILLNLKEIVFSGQLQESTIGRLTVQGPAIVTARSFELPPEIKLIDPEQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFED--RSYPIDAVFMPVENANHSI-HSYGNGN 144
AT+ L +E KIE GY + +N + +D+VFMPV+ N I + G N
Sbjct: 128 ATICGNNTLEMEFKIEVGSGYKIVEKDNSTEHFEFLQVDSVFMPVKKVNFRIEETRGENN 187
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEET 15
E L L+IWTNGS++ KEA+ A+ NLINLF P ++ E+
Sbjct: 188 ILNEQLILDIWTNGSISAKEAISNAADNLINLFSPLKTIDGES 230
[215][TOP]
>UniRef100_A0YJS0 DNA-directed RNA polymerase alpha subunit n=1 Tax=Lyngbya sp. PCC
8106 RepID=A0YJS0_9CYAN
Length = 314
Score = 116 bits (290), Expect = 9e-25
Identities = 68/164 (41%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EIL+NL EIVL S + + VQGP +TA LP VE++D Q+I
Sbjct: 68 IPGVREDVLEILLNLKEIVLNSYSNQRQIGRLLVQGPATVTAGHFDLPSEVEVVDKNQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIH-SYGNG 147
ATL+ L +E ++E+ GY N E + IDAVFMPV N+++ + G
Sbjct: 128 ATLSPGSTLEMEFQVEKGTGYRAIDRNRDEATAVDFLQIDAVFMPVRKVNYTVEDARVGG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEET 15
+ +++ L L+IWTNGSLTP+EAL QA+ L++LF+P + E+
Sbjct: 188 SLEKDRLILDIWTNGSLTPQEALSQAATILVDLFVPLKDITLES 231
[216][TOP]
>UniRef100_Q2JL74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=RPOA_SYNJB
Length = 335
Score = 116 bits (290), Expect = 9e-25
Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EIL+N+ E+VLRS+ T+ + QGPG +TA + LP VE+I+ HI
Sbjct: 88 VPGVREDVMEILLNMKELVLRSSSPETQVGRLVAQGPGEVTAEKLQLPSDVEVINPRHHI 147
Query: 314 ATLTEPIDLCIELKIERNRGY-------SLKMSNNFEDRSYPIDAVFMPVENANHSIHSY 156
ATL E L +E I R GY S M+ +F ID+VFMPV N+++ +
Sbjct: 148 ATLAEGAILEMEFMIGRGHGYRAVDYSDSKAMAIDF----LQIDSVFMPVRKVNYAVEAA 203
Query: 155 GNGN-EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV 27
G +++ L LEIWTNGSLTP+EAL QA+R L+ LF P V
Sbjct: 204 RVGQFLEKDRLVLEIWTNGSLTPQEALSQAARILVGLFAPLQEV 247
[217][TOP]
>UniRef100_P48118 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanophora
paradoxa RepID=RPOA_CYAPA
Length = 315
Score = 115 bits (287), Expect = 2e-24
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = -1
Query: 497 NIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQH 318
+I G++E V E+L+NL IVL+S + + +QG +T + LP VEII TQ+
Sbjct: 67 SIPGVKEDVLELLLNLKNIVLKSYTNEPQIGRLKIQGACKVTTANFELPSEVEIIHGTQY 126
Query: 317 IATLTEPIDLCIELKIERNRGYSL---KMSNNFEDRSYPIDAVFMPVENANHSIHS-YGN 150
+AT+ E L +E KIE+ RGY + K + N D PIDA+FMPV N+ + +
Sbjct: 127 VATVAENAILEMEFKIEKGRGYKIIDKKQTENSID-FLPIDAIFMPVRKVNYMVEEIFLR 185
Query: 149 GNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+E +E L LEIW NGS+TP++++ QA+ L+NLF PF + E
Sbjct: 186 NSEIKERLILEIWRNGSVTPQDSISQAAEVLLNLFNPFKKINFE 229
[218][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 114 bits (286), Expect = 3e-24
Identities = 71/167 (42%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Frame = -1
Query: 488 GIQESVHEILMNLNEIVLRSNL--------YGTRNALICVQGPGYITARDIILPPAVEII 333
G++ESV EIL+NL +IV++ + A I QGPG +TA I P ++ +
Sbjct: 79 GVRESVDEILLNLKQIVIKGAKGASITPLDHKEYRASIFAQGPGVVTAEHIKFPSSILAV 138
Query: 332 DNTQHIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYG 153
D Q IATL LCIEL I + L + + + IDA F PV+ AN SIHS G
Sbjct: 139 DPDQSIATLLNETQLCIELFIRQGIAKQLTRTKK-NHQGFFIDANFTPVQKANFSIHSVG 197
Query: 152 NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLF----IPFLHVE 24
+ Q++L LEIWTN +LTP EAL+QA +L+NLF P LH E
Sbjct: 198 DPKGLQQLLLLEIWTNKTLTPAEALYQAHASLLNLFHQISPPLLHKE 244
[219][TOP]
>UniRef100_B1XJI4 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Synechococcus
sp. PCC 7002 RepID=B1XJI4_SYNP2
Length = 313
Score = 114 bits (285), Expect = 3e-24
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E EI++N+ EI+L+S + + + GPG +TA LP VE++D TQ+I
Sbjct: 68 IPGVREDALEIILNMKEIILKSYTHQPQIGRLTATGPGQVTAAQFDLPSEVEVVDPTQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHS-YGNG 147
ATL + L +E +IE+ + Y N E + IDAVFMPV N+S+ S + G
Sbjct: 128 ATLADGAKLEMEFRIEKGKSYRAVQRNRDEATALDFLQIDAVFMPVTKVNYSVDSIHSEG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
+ ++ L LEIWTNGS+ P+EAL QA+ + LF P
Sbjct: 188 DAVRDRLTLEIWTNGSIKPEEALSQAAAIAVELFNP 223
[220][TOP]
>UniRef100_Q9MUV0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesostigma viride
RepID=RPOA_MESVI
Length = 316
Score = 114 bits (285), Expect = 3e-24
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ GI+ESV EIL+NL EIV R+ + + +QGP + A ++ LP ++E++D Q+I
Sbjct: 73 LPGIRESVLEILLNLKEIVFRTKSLDVQKGYLSIQGPCVVKAANLQLPTSIEVVDGGQYI 132
Query: 314 ATLTEPIDLCIELKIERNRGYSL---KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGN 144
ATL+ +L +E I +GY + + N S P+DA+FMP+ N+ +
Sbjct: 133 ATLSGNANLDMEFVINTGKGYQMADYAIKKNSYISSLPVDAIFMPIHKVNYMVEQDHTSK 192
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
E + LEIWTNGS++P++AL + +I+LF P H E
Sbjct: 193 FLTERVILEIWTNGSISPRDALDIGIKKVIDLFNPLHHCSSE 234
[221][TOP]
>UniRef100_B4VPM9 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Microcoleus
chthonoplastes PCC 7420 RepID=B4VPM9_9CYAN
Length = 315
Score = 113 bits (282), Expect = 8e-24
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAGI+E V EIL+N+ E+VL+S G + + GP + + LP VE +D Q+I
Sbjct: 68 IAGIREDVLEILLNMKEVVLKSYTPGPHIGRVMITGPSTVRSAQFDLPSDVEFVDPGQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIH-SYGNG 147
ATL + L +E +IER +GY E S +DAVFMPV N+S+ + +G
Sbjct: 128 ATLADGAKLEMEFRIERGKGYRSVERGRDETSSVDFLQLDAVFMPVTKVNYSVEDTRVDG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
+ +++ L L++WTNGS++P+EAL QA+ L++LF P +E
Sbjct: 188 SLEKDRLILDVWTNGSVSPQEALSQAANILVDLFNPLKDIE 228
[222][TOP]
>UniRef100_B0JY38 RNA polymerase alpha subunit n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JY38_MICAN
Length = 313
Score = 112 bits (281), Expect = 1e-23
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V E+++N+ EI+L+S T+ + GP + A LP VEI+D Q++
Sbjct: 68 VQGVREDVMELMLNMKEIILKSYTNQTQIGRLVATGPATVVAAQFDLPSEVEIVDRNQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATL E L +E ++E+ +GY + E S ID++FMPV N+S+
Sbjct: 128 ATLAEGAKLEMEFRVEKGKGYRAIDRSKDEATSLDFLQIDSIFMPVTKVNYSVEDIRSES 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
+ ++ L LEIWTNGS+ PKEAL QA+ L+NLF P
Sbjct: 188 GQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNP 223
[223][TOP]
>UniRef100_Q9TLV2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidium
caldarium RepID=RPOA_CYACA
Length = 310
Score = 112 bits (281), Expect = 1e-23
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EIL+NL IVL+ N+ + + VQGP +T+ I P + ++D Q+I
Sbjct: 72 VKGVKEDVLEILLNLKNIVLKGNVLKNQIGRLKVQGPAIVTSGQIEFPLDITVVDPCQYI 131
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS----YPIDAVFMPVENANHSIHSYGNG 147
AT++ L +ELK+E++ GY K+ F +S PID++FMPV+ N+ + +
Sbjct: 132 ATISGNDYLEMELKVEKSSGY--KLVETFSKKSPLDFLPIDSIFMPVKKVNYYVEEILDS 189
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
E L LE+WTNGSL+P+++++ AS NL+ LF P
Sbjct: 190 KVAYEKLILELWTNGSLSPQQSINYASDNLVKLFNP 225
[224][TOP]
>UniRef100_P73297 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechocystis sp.
PCC 6803 RepID=RPOA_SYNY3
Length = 314
Score = 112 bits (280), Expect = 1e-23
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++N+ E+VL+S + + GPG +TA +P VE+ID Q+I
Sbjct: 68 ILGVREDVLEIMLNMKELVLKSYTDQPQIGRLTAIGPGTVTAAQFEVPSEVEVIDPNQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATL E L +E ++ER GY + E+ S ID+VFMPV N+++ +G
Sbjct: 128 ATLAEGAKLEMEFRVERGVGYRVIERGKDENSSLDFLQIDSVFMPVTKVNYTVEDIRADG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
++ L L+IWTNGS+ P+EAL +AS + NLFIP + E
Sbjct: 188 MSPKDRLILDIWTNGSIQPREALSEASDIIANLFIPLKDLNE 229
[225][TOP]
>UniRef100_P49465 DNA-directed RNA polymerase subunit alpha n=1 Tax=Odontella
sinensis RepID=RPOA_ODOSI
Length = 312
Score = 112 bits (280), Expect = 1e-23
Identities = 68/161 (42%), Positives = 95/161 (59%), Gaps = 7/161 (4%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+E + EIL+NL IVL+S + + ++GP +TA I LP VEI++ +I
Sbjct: 68 IPGIREDILEILLNLKGIVLKSKTNDLKFGRLKIKGPAVVTANCIQLPSEVEIVNPNHYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSL------KMSNNFEDRSYPIDAVFMPVENANHSIHS-Y 156
AT+T L IE KIE GY L K S ++ IDA+FMPV+ + I + Y
Sbjct: 128 ATITTSNVLEIEFKIESGTGYKLAGQTFCKKSQDY----LQIDAIFMPVQKVDFKIENIY 183
Query: 155 GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 33
N N+ E LFL+IWTNGS++P+EA+ ASR +I+ F L
Sbjct: 184 DNSNDLTERLFLDIWTNGSMSPEEAVSSASRFIISFFSSLL 224
[226][TOP]
>UniRef100_B0C430 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Acaryochloris
marina MBIC11017 RepID=B0C430_ACAM1
Length = 313
Score = 112 bits (279), Expect = 2e-23
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V +IL+N+ ++VLRS+ + + VQGP +T D LP VEI++ TQ++
Sbjct: 68 IPGVREDVLDILLNMKQVVLRSHTNDPQIGRLFVQGPATVTTDDFELPTEVEIVNPTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSYGNGN 144
ATL+ L +E +IE+ +GY N E + IDA++MPV N+ + G
Sbjct: 128 ATLSSDATLEMEFRIEQGKGYHAVGKNRDEAAALDFLEIDAIYMPVRRVNYEVEDARVGG 187
Query: 143 E-KQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
+++ L L+IWTNG+LTP+E+L QA+ L++LF P
Sbjct: 188 ALEKDRLILDIWTNGNLTPQESLSQAATILVDLFNP 223
[227][TOP]
>UniRef100_A8YCU3 RpoA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YCU3_MICAE
Length = 313
Score = 111 bits (278), Expect = 2e-23
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V E+++N+ EI L+S T+ + GP + A LP VEI+D Q++
Sbjct: 68 VEGVREDVMELMLNMKEITLKSYTNQTQIGRLVATGPATVVAAQFDLPSEVEIVDRNQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATL E L +E ++E+ +GY + E S ID++FMPV N+S+
Sbjct: 128 ATLAEGAKLEMEFRVEKGKGYRAIDRSKEEATSLDFLQIDSIFMPVTKVNYSVEDIRSES 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
+ ++ L LEIWTNGS+ PKEAL QA+ L+NLF P
Sbjct: 188 GQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNP 223
[228][TOP]
>UniRef100_A0T0K0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaeodactylum
tricornutum RepID=RPOA_PHATR
Length = 311
Score = 110 bits (276), Expect = 4e-23
Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E + EIL+NL I+ S + T+ + VQGP +TA I LPP VEII+ +I
Sbjct: 68 IPGVREDILEILLNLKGIICTSQIQDTQFGHLKVQGPSVVTADLIQLPPGVEIINPNHYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNF--EDRSY-PIDAVFMPVENANHSIHS-YGNG 147
AT++ L IE K E GY L S NF ED +Y +D +FMPV+ + I + Y
Sbjct: 128 ATISTSNILEIEFKFEYGSGYHL-ASQNFVEEDENYLQLDTIFMPVQKVDFKIENIYDAT 186
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
N E LFL+IWTNGS++P +AL A++ +I+LF
Sbjct: 187 NNISERLFLDIWTNGSISPNDALESAAQVIIDLF 220
[229][TOP]
>UniRef100_A3IQ28 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanothece sp.
CCY0110 RepID=A3IQ28_9CHRO
Length = 314
Score = 110 bits (275), Expect = 5e-23
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++N+ EIVL+S + + G ++TA LP VE+I+ TQ I
Sbjct: 68 IPGVREDVLEIMLNMKEIVLKSYTEQPQIGRLVATGAAHVTAGQFDLPSEVEVINPTQPI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATLTE L +E +IE+ GY ++ E + IDAVFMPV N+S+ S G
Sbjct: 128 ATLTEGAKLEMEFRIEKGVGYVPVERSSDEPTALDFLQIDAVFMPVTKVNYSVESIRGEE 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 188 GEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNP 223
[230][TOP]
>UniRef100_A0ZG51 DNA-directed RNA polymerase alpha subunit n=1 Tax=Nodularia
spumigena CCY9414 RepID=A0ZG51_NODSP
Length = 315
Score = 110 bits (275), Expect = 5e-23
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EILM + E++LRS + + V GP +T LP VE+ID TQ++
Sbjct: 68 VPGVREDVLEILMKMKEVILRSYSSQPQIGRLLVNGPATVTVAHFDLPSEVEVIDQTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSI-HSYGNG 147
ATL E L +E +IE+ +GY E S ID+VFMPV N+S+ + G
Sbjct: 128 ATLAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSVEEARGES 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+ ++ L LE+WTNGS++P+EAL A+ L+ LF P + E
Sbjct: 188 SIPKDRLLLEVWTNGSISPQEALSSAAGILVELFNPLKDISLE 230
[231][TOP]
>UniRef100_B1WQT5 RNA polymerase alpha subunit n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WQT5_CYAA5
Length = 314
Score = 110 bits (274), Expect = 6e-23
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++N+ EIVL+S + + G ++TA LP VE+I+ TQ I
Sbjct: 68 IPGVREDVLEIMLNMKEIVLKSYTDQPQIGRLVATGAAHVTAGQFDLPSEVEVINPTQPI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATLTE L +E +IE+ GY ++ E + IDAVFMPV N+S+ S G
Sbjct: 128 ATLTEGAKLEMEFRIEKGVGYVPVERSSDEPTALDFLQIDAVFMPVTKVNYSVESIRGEE 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 188 GEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNP 223
[232][TOP]
>UniRef100_Q4C148 DNA-directed RNA polymerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C148_CROWT
Length = 314
Score = 110 bits (274), Expect = 6e-23
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++N+ EIVL+S + + G ++TA LP VE+++ TQ I
Sbjct: 68 IPGVREDVLEIMLNMKEIVLKSYTEQPQIGRLVATGAAHVTAGQFELPSEVEVVNPTQPI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS----YPIDAVFMPVENANHSIHSY-GN 150
ATLTE L +E +IE+ GY + + + E+ + IDAVFMPV N+S+ S G
Sbjct: 128 ATLTEGAKLEMEFRIEKGVGY-VPVERSSEEPAALDFLQIDAVFMPVTKVNYSVESIRGE 186
Query: 149 GNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 187 EGEAKDRLMLEIWTNGSFNPKEALSKAADILVDLFNP 223
[233][TOP]
>UniRef100_A0T0Z4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Thalassiosira
pseudonana RepID=RPOA_THAPS
Length = 313
Score = 110 bits (274), Expect = 6e-23
Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E + EIL+NL IVL+S + + +QGP ITA I LPP +EII+ +I
Sbjct: 70 IPGVREDILEILLNLKGIVLKSKTPNRQFGRLRLQGPAVITASSIQLPPEIEIINPNHYI 129
Query: 314 ATLTEPIDLCIELKIERNRGYSLK---MSNNFEDRSYPIDAVFMPVENANHSIHS-YGNG 147
AT++ L IE KIE Y L S+ FED DA+FMPV+ + + + Y N
Sbjct: 130 ATISSSHILEIEFKIESGSKYRLANELFSDKFED-FIETDAIFMPVQKVDFKVENVYDNS 188
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
N +E L ++IWTNGS++P++A+ S +INLF
Sbjct: 189 NNIKERLLIDIWTNGSISPEQAIFSGSNLIINLF 222
[234][TOP]
>UniRef100_Q3MF97 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anabaena
variabilis ATCC 29413 RepID=RPOA_ANAVT
Length = 315
Score = 110 bits (274), Expect = 6e-23
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 4/163 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EI+M + E++L+S + + V GP ITA LP VE+ID TQ++
Sbjct: 68 VPGVREDVLEIIMRMKEVILKSYSSQAQIGRLLVNGPTTITASHFDLPSEVEVIDPTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
AT+ E L +E +IER +GY E S ID++FMPV N+S+ +G
Sbjct: 128 ATIAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSVEEVRADG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+ ++ L LE+WTNGS++P+EAL A+ L++LF P + E
Sbjct: 188 SIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLE 230
[235][TOP]
>UniRef100_Q8YPK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nostoc sp. PCC
7120 RepID=RPOA_ANASP
Length = 315
Score = 110 bits (274), Expect = 6e-23
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 4/163 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EI+M + E++L+S + + V GP ITA LP VE+ID TQ++
Sbjct: 68 VPGVREDVLEIIMRMKEVILKSYSSQAQIGRLLVNGPTTITASHFDLPSEVEVIDPTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
AT+ E L +E +IER +GY E S ID++FMPV N+S+ +G
Sbjct: 128 ATIAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSVEEVRADG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+ ++ L LE+WTNGS++P+EAL A+ L++LF P + E
Sbjct: 188 SIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLE 230
[236][TOP]
>UniRef100_B2ITN1 DNA-directed RNA polymerase, alpha subunit RpoA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2ITN1_NOSP7
Length = 315
Score = 109 bits (273), Expect = 8e-23
Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 4/163 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EILM + E++L++ + + V GP ITA LP VE+ID TQ++
Sbjct: 68 VPGVREDVLEILMRMKEVILKNYSSQPQIGRLLVSGPTTITAAHFDLPSEVEVIDPTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSI-HSYGNG 147
AT+ E L +E +IE+ +GY E S ID++FMPV N+S+ S G G
Sbjct: 128 ATIAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSVEESRGEG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
++ L LE+WTNGS++P+EAL A+ L++LF P + E
Sbjct: 188 LIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLE 230
[237][TOP]
>UniRef100_C7QS38 DNA-directed RNA polymerase, alpha subunit n=2 Tax=Cyanothece
RepID=C7QS38_CYAP0
Length = 316
Score = 108 bits (271), Expect = 1e-22
Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 4/156 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++N+ EIVL+S + + G +TA + LP VE++D TQ++
Sbjct: 70 IPGVREDVLEIMLNMKEIVLKSYSDQAQIGRLVATSAGTVTAANFELPSEVEVVDPTQYV 129
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
ATLTE L +E +IE GY + S IDAVFMPV N+ + G
Sbjct: 130 ATLTEGSKLEMEFRIETGTGYKGVERGKDDGTSLDFLEIDAVFMPVTKVNYIVEDIRGEH 189
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
E Q+ L LEIWTNGS PKEAL +A+ +++LF P
Sbjct: 190 GEAQDRLILEIWTNGSFNPKEALSEAAEIVVDLFSP 225
[238][TOP]
>UniRef100_B4B3P8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7822 RepID=B4B3P8_9CHRO
Length = 314
Score = 108 bits (271), Expect = 1e-22
Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I+G++E V E+++N+ EI L+S + + GP +TA LP VEI+D +Q++
Sbjct: 68 ISGVREDVMELILNMKEITLKSYTSQPQIGRLVATGPATVTAGQFDLPSEVEIVDPSQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSYG-NG 147
ATL E L +E +IE+ +GY + S ID+VFMPV N+S+ +G
Sbjct: 128 ATLAEGSKLEMEFRIEKGKGYRAIERGKDDSTSLDFLQIDSVFMPVTKVNYSVEDVRVDG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
++ L +EIWTNGS+ PKEAL +A+ +++LF P + E
Sbjct: 188 TSSKDRLTIEIWTNGSVNPKEALSEAAAIIVDLFSPLRDLNE 229
[239][TOP]
>UniRef100_B9YIU5 DNA-directed RNA polymerase, alpha subunit n=1 Tax='Nostoc azollae'
0708 RepID=B9YIU5_ANAAZ
Length = 314
Score = 108 bits (270), Expect = 2e-22
Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
+ G++E V EILM + E++L++ + + V GP +TA LP VE+ID TQ++
Sbjct: 68 VPGVREDVLEILMRMKEVILKNYSSQPQIGRLLVNGPVTVTAAHFDLPSEVEVIDPTQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSYGNGN 144
AT+ + L +E +IER +GY E S ID+VFMPV N+S+
Sbjct: 128 ATIADGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSVEEARGDG 187
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
++ L LE+WTNGS++P+EAL A+ L++LF P + E
Sbjct: 188 SLKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLE 229
[240][TOP]
>UniRef100_B5W6Q8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Arthrospira
maxima CS-328 RepID=B5W6Q8_SPIMA
Length = 314
Score = 108 bits (269), Expect = 2e-22
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E V EI++NL E VL+S+ Y + + VQGP +T LP VE+++ Q+I
Sbjct: 68 IEGVREDVLEIMLNLKEAVLKSHTYQKQIGRLLVQGPATVTVGHFDLPSEVEVVNKNQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS-----YPIDAVFMPVENANHSIHSYGN 150
ATL+ L +E +IE+ GY + + D S IDA+FMPV N+++ +
Sbjct: 128 ATLSPGATLEMECQIEKGTGY--RAVDRHRDDSAALDFLQIDAIFMPVRKVNYTVEDARD 185
Query: 149 GNE-KQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
G +++ L LEIWT+GSLTP+EA+ QA+ L++LF
Sbjct: 186 GGSLEKDRLTLEIWTSGSLTPQEAISQAAAILVDLF 221
[241][TOP]
>UniRef100_Q6J226 RNA polymerase alpha subunit (Fragment) n=1 Tax=Chaetoceros
gracilis RepID=Q6J226_9STRA
Length = 300
Score = 108 bits (269), Expect = 2e-22
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+E + EIL+NL +V++S + ++GP +TA I LPP +EII+ +I
Sbjct: 70 IPGIREDILEILLNLKGVVVKSATPDISFGRLKIKGPAVVTADSIQLPPNIEIINPNHYI 129
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHS-YGNG 147
AT++ L IE K ER GY L F D+S IDA+FMP++ + I + Y N
Sbjct: 130 ATISTSNVLEIEFKFERGTGYKL-AGQTFCDKSEDFLQIDAIFMPIQKVDFKIENVYDNS 188
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
N E LFL+IWTNGS++P +A+ AS+ +I F
Sbjct: 189 NSITERLFLDIWTNGSISPDDAISYASKFIIEFF 222
[242][TOP]
>UniRef100_Q6J224 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassionema
frauenfeldii RepID=Q6J224_9STRA
Length = 298
Score = 108 bits (269), Expect = 2e-22
Identities = 63/160 (39%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E + EIL+NL IV++S+ + + VQGP +TA I LP ++I++ +I
Sbjct: 68 IPGVREDILEILLNLKGIVIKSDTTEIKFGRLKVQGPLVLTADSIDLPSGIKIVNPNHYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSL--KMSNNFEDRSYPIDAVFMPVENANHSIHS-YGNGN 144
AT++ I+L +E KIE GY L ++ N+ ID++FMPV+ N I + Y N
Sbjct: 128 ATISTSINLELEFKIEHGIGYKLASQLFNDENKNFLQIDSIFMPVQKVNFKIENLYDADN 187
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVE 24
E L LEIWTNGS+ P EAL +A + +IN F L +
Sbjct: 188 SISERLILEIWTNGSIEPIEALKKACKIIINCFNSLLKTQ 227
[243][TOP]
>UniRef100_Q7NFF5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gloeobacter
violaceus RepID=RPOA_GLOVI
Length = 314
Score = 108 bits (269), Expect = 2e-22
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Frame = -1
Query: 488 GIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIAT 309
GI+E V +IL+N+ E+VLRS + + VQGP +TA D+ LP V+++ +IAT
Sbjct: 70 GIREDVLDILLNMKELVLRSYTSDIQIGRLAVQGPKRVTAADLELPTEVQVVHPRHYIAT 129
Query: 308 LTEPIDLCIELKIERNRGYSLKMSNNFEDRS----YPIDAVFMPVENANHSIHSYGN-GN 144
L E L +E +IER +GY + ED + IDA+FMPV N ++ S + N
Sbjct: 130 LAEDGQLEMEFQIERGKGYR-AIERGSEDGAAIDYLSIDAIFMPVRKVNWTVESERSAAN 188
Query: 143 EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 18
+Q+ L LEIWT+GSL+P+EAL QA++ L++ P + E
Sbjct: 189 VEQDRLTLEIWTSGSLSPQEALSQAAKILVDQLRPLQEITFE 230
[244][TOP]
>UniRef100_Q6J221 RNA polymerase alpha subunit (Fragment) n=1 Tax=Phaeodactylum sp.
Bohlin BA153065 RepID=Q6J221_9STRA
Length = 298
Score = 106 bits (265), Expect = 7e-22
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E + EIL+NL I+ S + T+ + VQGP +TA I LPP VEII+ +I
Sbjct: 68 IPGVREDILEILLNLKGIICTSQIQDTQFGHLKVQGPSVVTADLIQLPPEVEIINPNHYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNF--EDRSY-PIDAVFMPVENANHSIHS-YGNG 147
AT+T L IE K GY L S F ED +Y +D +FMPV+ + I + Y
Sbjct: 128 ATITTSNILEIEFKFVYGGGYHL-ASQKFCREDENYLQLDTIFMPVQKVDFKIENIYDAT 186
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
N E LFL+IWTNGS++P +AL A++ +I+LF
Sbjct: 187 NNISERLFLDIWTNGSISPNDALESAAQVIIDLF 220
[245][TOP]
>UniRef100_B7KI11 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7424 RepID=B7KI11_CYAP7
Length = 314
Score = 106 bits (264), Expect = 9e-22
Identities = 56/162 (34%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I+G++E V E+++N+ EI L+S + + GP +TA +P +E++D +Q++
Sbjct: 68 ISGVREDVMELILNMKEITLKSYTSQPQIGRLVATGPATVTAAQFDVPSEIEVVDPSQYV 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSYG-NG 147
ATL++ L +E ++E+ +GY + S ID+VFMPV N+S+ +G
Sbjct: 128 ATLSDGSKLEMEFRVEKGKGYRAIERGKDDTTSLDFLQIDSVFMPVTKVNYSVEDVRVDG 187
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEE 21
++ L LEIWTNGS+ PKEAL +A+ +++LF P + E
Sbjct: 188 TGSKDRLTLEIWTNGSINPKEALSEAAAIIVDLFSPLKDLNE 229
[246][TOP]
>UniRef100_Q2WGF4 RNA polymerase alpha chain like (Fragment) n=1 Tax=Selaginella
uncinata RepID=Q2WGF4_SELUN
Length = 245
Score = 106 bits (264), Expect = 9e-22
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
IAG++ESVHE MNL EI L ++ + A I + GPG + ARD + P ++ II QH
Sbjct: 76 IAGVRESVHETSMNLKEIALTAHPSAAQEAHIPIVGPGKVAARDTVPPSSIGIIYPAQHA 135
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIH--SYGNGNE 141
AT+T I ++E GY + ++ S P DAV MP+ NAN+SIH +G
Sbjct: 136 ATVTRKIRSSTGSRVEGGCGYRRRNMVEYQKGSPPPDAVSMPIRNANYSIHRLESHSGGI 195
Query: 140 KQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 39
+E+ E T+GS TP EA ++ASR+ NLF P
Sbjct: 196 MKEMPPPEARTDGSPTPGEATYEASRDSANLFSP 229
[247][TOP]
>UniRef100_Q6J225 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassiosira sp.
Cleve BA153110 RepID=Q6J225_9STRA
Length = 300
Score = 105 bits (263), Expect = 1e-21
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E + EIL+NL IVL+S + A + + GP ITA I LPP VEII+ +I
Sbjct: 70 IPGVREDILEILLNLKGIVLKSKNSTRQFARLRLHGPAVITASSIQLPPDVEIINPNHYI 129
Query: 314 ATLTEPIDLCIELKIERNRGYSL-------KMSNNFEDRSYPIDAVFMPVENANHSIHS- 159
ATL+ L IE KIE Y L K+SN E DA+FMP + + + +
Sbjct: 130 ATLSSSHILEIEFKIESGHDYRLANETFSDKLSNFIE-----TDAIFMPDQKDDFKVENV 184
Query: 158 YGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
Y N N +E +FL++WTNGS++P++A+ AS +I+LF
Sbjct: 185 YDNSNNVKERVFLDVWTNGSISPEQAIFSASNLIIDLF 222
[248][TOP]
>UniRef100_B8HMS8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7425 RepID=B8HMS8_CYAP4
Length = 314
Score = 105 bits (262), Expect = 2e-21
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I G++E +IL+ + E+VLRS + + +QGP +TA + + P VE+I+ +I
Sbjct: 67 IPGVREDALDILLRMKELVLRSYSPDPQIGRLFIQGPATVTAINFEVSPDVEVINLDHYI 126
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSYGNGN 144
ATL+ L +E KIE+ +GY E S IDA+FMPV N+++ +G
Sbjct: 127 ATLSADATLEMEFKIEQGKGYRAIERGKDESASLDFLQIDAIFMPVRKVNYTVEDARSGG 186
Query: 143 -EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV 27
+++ L LEIWTNGSLTP+EAL+Q + L++LF P V
Sbjct: 187 LVEKDRLVLEIWTNGSLTPQEALNQGASILVDLFNPLKDV 226
[249][TOP]
>UniRef100_Q6J227 RNA polymerase alpha subunit (Fragment) n=1 Tax=Corethron hystrix
RepID=Q6J227_9STRA
Length = 301
Score = 105 bits (261), Expect = 2e-21
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 5/155 (3%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNAL--ICVQGPGYITARDIILPPAVEIIDNTQ 321
I G++E V E+L+NL IV+++N + + VQGP ITA I LP +EI++ Q
Sbjct: 69 IEGVREDVLELLLNLRPIVIKNNSDNSEMKFGRLKVQGPAVITANAIQLPTELEILNPNQ 128
Query: 320 HIATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS--YPIDAVFMPVENANHSIHS-YGN 150
+IAT++ + L +E K E GY L E S IDAVFMPV+ + + + Y
Sbjct: 129 YIATISRSMILEMEFKFESGIGYRLVNQTKMESSSDFLEIDAVFMPVQKVDFKVENIYDK 188
Query: 149 GNEKQEILFLEIWTNGSLTPKEALHQASRNLINLF 45
E L ++IWTNGS++P+ AL+++S N+I LF
Sbjct: 189 NKHISENLIIDIWTNGSISPETALYESSNNIIELF 223
[250][TOP]
>UniRef100_A6MW22 DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodomonas salina
RepID=RPOA_RHDSA
Length = 314
Score = 105 bits (261), Expect = 2e-21
Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 9/169 (5%)
Frame = -1
Query: 494 IAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHI 315
I GI+E V EIL+NL E+VL+S + VQGP +T ++ LP VE+ID Q+I
Sbjct: 68 IPGIREDVLEILLNLKEVVLKSQTKNPSVGRLRVQGPAIVTTSNLELPSEVELIDPNQYI 127
Query: 314 ATLTEPIDLCIELKIERNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHSY-GNG 147
AT+ L +E +IE +GY L + + ++ S +DA+FMPV+ N+ N
Sbjct: 128 ATICGNNILEMEFRIETGKGYHL-IERSIDETSIDFLQVDAIFMPVKKVNYLTKDIRSND 186
Query: 146 NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHV-----EEET 15
N QE L LE+WTNGS+ P++A+ Q + L L P + EE+T
Sbjct: 187 NLLQEQLLLEVWTNGSIDPQDAVSQGGKILTELLHPLKEINFKSDEEDT 235