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[1][TOP]
>UniRef100_Q9C6C2 RNA polymerase subunit; 10595-12672 n=1 Tax=Arabidopsis thaliana
RepID=Q9C6C2_ARATH
Length = 375
Score = 173 bits (438), Expect = 6e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL
Sbjct: 293 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 352
Query: 225 PPEVLFTEAVKILEAKCEAITDF 157
PPEVLFTEAVKILEAKCEAITDF
Sbjct: 353 PPEVLFTEAVKILEAKCEAITDF 375
[2][TOP]
>UniRef100_Q8LD68 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q8LD68_ARATH
Length = 375
Score = 173 bits (438), Expect = 6e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL
Sbjct: 293 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 352
Query: 225 PPEVLFTEAVKILEAKCEAITDF 157
PPEVLFTEAVKILEAKCEAITDF
Sbjct: 353 PPEVLFTEAVKILEAKCEAITDF 375
[3][TOP]
>UniRef100_Q39215 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q39215_ARATH
Length = 375
Score = 173 bits (438), Expect = 6e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL
Sbjct: 293 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 352
Query: 225 PPEVLFTEAVKILEAKCEAITDF 157
PPEVLFTEAVKILEAKCEAITDF
Sbjct: 353 PPEVLFTEAVKILEAKCEAITDF 375
[4][TOP]
>UniRef100_UPI00019857F6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019857F6
Length = 372
Score = 124 bits (310), Expect = 4e-27
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED+ KGKK+ATVA+PR CTLC+EC+R DD HV + VKNHFIF IESTG+L
Sbjct: 288 PVNVFDIEDIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGAL 347
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PPEVLF EAVK+LE KCE +
Sbjct: 348 PPEVLFNEAVKVLEDKCERV 367
[5][TOP]
>UniRef100_A7Q9B1 Chromosome chr19 scaffold_66, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q9B1_VITVI
Length = 362
Score = 124 bits (310), Expect = 4e-27
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED+ KGKK+ATVA+PR CTLC+EC+R DD HV + VKNHFIF IESTG+L
Sbjct: 278 PVNVFDIEDIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGAL 337
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PPEVLF EAVK+LE KCE +
Sbjct: 338 PPEVLFNEAVKVLEDKCERV 357
[6][TOP]
>UniRef100_Q39216 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana
RepID=Q39216_ARATH
Length = 385
Score = 120 bits (301), Expect = 5e-26
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDD-DLVDHVDLGSVKNHFIFNIESTGS 229
P+ VFDIEDMG+G+KRATVA+PR C+LC+EC+RD + D VDL VKNHFIF IESTGS
Sbjct: 300 PKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGS 359
Query: 228 LPPEVLFTEAVKILEAKCEAI 166
PPEVLF EAVKILE KCE +
Sbjct: 360 QPPEVLFNEAVKILEDKCERV 380
[7][TOP]
>UniRef100_B9S9W7 DNA-directed RNA polymerase I/III subunits, putative n=1
Tax=Ricinus communis RepID=B9S9W7_RICCO
Length = 374
Score = 119 bits (299), Expect = 8e-26
Identities = 56/80 (70%), Positives = 65/80 (81%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED+G GKKRATVA+PR CTLC+EC+R + V L VK+HFIF IESTG+L
Sbjct: 290 PVNVFDIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGAL 349
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PPEVLFTEAVK+LE KCE +
Sbjct: 350 PPEVLFTEAVKVLEDKCERV 369
[8][TOP]
>UniRef100_C6TAS0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TAS0_SOYBN
Length = 388
Score = 119 bits (297), Expect = 1e-25
Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDD-DLVDHVDLGSVKNHFIFNIESTGS 229
P NVFDIED+GKGK+RA VA+PR CTLC+EC+R + D V L VKNHFIF IESTG+
Sbjct: 303 PVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGA 362
Query: 228 LPPEVLFTEAVKILEAKCEAI 166
LPPEVLFTEAVKILE KCE +
Sbjct: 363 LPPEVLFTEAVKILEDKCERV 383
[9][TOP]
>UniRef100_C5XXF5 Putative uncharacterized protein Sb04g006420 n=1 Tax=Sorghum
bicolor RepID=C5XXF5_SORBI
Length = 370
Score = 110 bits (275), Expect = 5e-23
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED+G G KRA VA+PR CTLC+ECV + + V+L V++HFIF IESTG+L
Sbjct: 287 PVNVFDIEDLGNGGKRAVVAKPRACTLCRECVMGPN-GNQVELRRVRDHFIFTIESTGAL 345
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PPEVLFTEAVKILE KCE +
Sbjct: 346 PPEVLFTEAVKILEEKCERV 365
[10][TOP]
>UniRef100_B9GFY9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GFY9_POPTR
Length = 390
Score = 109 bits (273), Expect = 8e-23
Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVR-DDDLVDHVDLGSVKNHFIFNIESTGS 229
P VFDIED G KK+A VA R CTLC+EC+R D++ V L VK+HFIF IESTG+
Sbjct: 305 PSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGA 364
Query: 228 LPPEVLFTEAVKILEAKCEAI 166
LPPEVLFTEAVKILEAKCE +
Sbjct: 365 LPPEVLFTEAVKILEAKCERV 385
[11][TOP]
>UniRef100_Q10MU2 Os03g0295400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10MU2_ORYSJ
Length = 379
Score = 108 bits (269), Expect = 2e-22
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDD------LVDHVDLGSVKNHFIFNI 244
P NVFDIED+G G+KRA VA+PR CTLC++CV V+ V+L V++HFIF I
Sbjct: 289 PVNVFDIEDLGNGEKRAVVARPRACTLCRQCVMGPTGEVMGPTVEQVELRRVRDHFIFTI 348
Query: 243 ESTGSLPPEVLFTEAVKILEAKCEAI 166
ESTG+LPPE+LFTEAV+ILE KCE +
Sbjct: 349 ESTGALPPEMLFTEAVRILEEKCERV 374
[12][TOP]
>UniRef100_B4FAR4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FAR4_MAIZE
Length = 372
Score = 103 bits (258), Expect = 5e-21
Identities = 51/78 (65%), Positives = 60/78 (76%)
Frame = -1
Query: 399 NVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPP 220
NVFDIED+ G KRA VA+PR CTLC+ECV + V+L V++HFIF IESTGS+PP
Sbjct: 291 NVFDIEDLANGGKRAVVARPRACTLCRECVMGPN-EKQVELRRVRDHFIFTIESTGSMPP 349
Query: 219 EVLFTEAVKILEAKCEAI 166
EVLFTEAVKILE KC +
Sbjct: 350 EVLFTEAVKILEEKCARV 367
[13][TOP]
>UniRef100_A9T5P0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T5P0_PHYPA
Length = 360
Score = 100 bits (250), Expect = 4e-20
Identities = 52/80 (65%), Positives = 58/80 (72%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P VFDIED+G KK A VA+PR CTLC+ECVR D V L VK+HFIF IESTG+L
Sbjct: 277 PTGVFDIEDVGTVKK-AIVARPRNCTLCRECVRGTDWDKRVQLTRVKDHFIFTIESTGAL 335
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PEVLFTEA+KIL KC I
Sbjct: 336 RPEVLFTEAIKILNEKCHRI 355
[14][TOP]
>UniRef100_O08521 Homologous to 40kD subunit of RNA-polymerase I and III (Fragment)
n=1 Tax=Cricetulus griseus RepID=O08521_CRIGR
Length = 347
Score = 80.5 bits (197), Expect = 5e-14
Identities = 34/80 (42%), Positives = 58/80 (72%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V ++E+ GKK+A VA RK T+ +EC+R + D V LG V++H++F++ESTG +
Sbjct: 258 PKGVIELEEGPDGKKQARVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIM 317
Query: 225 PPEVLFTEAVKILEAKCEAI 166
P+VLF +++ +L++KC A+
Sbjct: 318 KPDVLFIKSIAVLKSKCLAV 337
[15][TOP]
>UniRef100_O94616 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Schizosaccharomyces pombe RepID=RPAC1_SCHPO
Length = 348
Score = 80.5 bits (197), Expect = 5e-14
Identities = 34/80 (42%), Positives = 58/80 (72%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V ++E+ GKK+A VA RK T+ +EC+R + D V LG V++H++F++ESTG +
Sbjct: 259 PKGVIELEEGPDGKKQARVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIM 318
Query: 225 PPEVLFTEAVKILEAKCEAI 166
P+VLF +++ +L++KC A+
Sbjct: 319 KPDVLFIKSIAVLKSKCLAV 338
[16][TOP]
>UniRef100_Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 n=1
Tax=Dictyostelium discoideum RepID=RPAC1_DICDI
Length = 345
Score = 79.3 bits (194), Expect = 1e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ VFDIED G+ A+P CT+C+EC+RD + +V + V++HFIF+IESTG+L
Sbjct: 261 PKKVFDIEDSGQ----VVAARPLDCTMCRECIRDPEFEQNVKIERVRDHFIFSIESTGAL 316
Query: 225 PPEVLFTEAVKILEAKCEAITD 160
+F EA+KI KC + +
Sbjct: 317 KSREIFQEAIKIFIEKCNIVEE 338
[17][TOP]
>UniRef100_B6JXY4 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JXY4_SCHJY
Length = 349
Score = 77.0 bits (188), Expect = 6e-13
Identities = 34/80 (42%), Positives = 55/80 (68%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V ++ED GK RA VA RK T+ +EC+R + D V LG V+++F+++IESTG +
Sbjct: 259 PAGVIELEDGPNGKPRARVADVRKDTVSRECLRHPEFADKVQLGRVRDYFLYSIESTGII 318
Query: 225 PPEVLFTEAVKILEAKCEAI 166
P+ LF +++ +L++KC A+
Sbjct: 319 KPDQLFLKSIAVLKSKCMAV 338
[18][TOP]
>UniRef100_A2ER03 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein
n=1 Tax=Trichomonas vaginalis G3 RepID=A2ER03_TRIVA
Length = 341
Score = 76.6 bits (187), Expect = 8e-13
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P VFDIED + V PRKCT C+EC+R+ L +V LG NH+ F +ES G
Sbjct: 257 PMGVFDIED-----SKLVVRSPRKCTTCRECIRNPSLAHYVSLGKEANHYEFTVESVGVR 311
Query: 225 PPEVLFTEAVKILEAKCEAITD 160
P VL EA++IL+ +C+ T+
Sbjct: 312 PAYVLVKEALQILQNRCDEFTE 333
[19][TOP]
>UniRef100_UPI0000F2C148 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1
Tax=Monodelphis domestica RepID=UPI0000F2C148
Length = 346
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++D+ KGKK ATVA PR T +E R ++L V L V++H+IF++ESTG LPPE
Sbjct: 261 VIQVQDV-KGKKVATVANPRLDTFSREIFRHENLKKLVRLARVRDHYIFSVESTGVLPPE 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 320 VLVSEAIKVLMGKCRRFMD 338
[20][TOP]
>UniRef100_UPI00016E11AA UPI00016E11AA related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AA
Length = 351
Score = 75.9 bits (185), Expect = 1e-12
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
+ V D+ED GKK A VA R T +E +R DDL + V LG ++HFIF +E+TG LP
Sbjct: 264 RGVIDLED-SNGKKVAKVANSRLDTCSREVLRHDDLKNVVKLGRHRDHFIFTVETTGILP 322
Query: 222 PEVLFTEAVKILEAKCE 172
P+VL TEA+K+L KC+
Sbjct: 323 PDVLVTEAIKVLMTKCQ 339
[21][TOP]
>UniRef100_B6Q738 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6Q738_PENMQ
Length = 373
Score = 75.5 bits (184), Expect = 2e-12
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P K T+ +EC+R D+ D V LG V++HFIFN+ESTG P + LF E+VK+
Sbjct: 297 GEDKAVVVDPFKDTVSRECLRHDEFKDKVKLGRVRDHFIFNVESTGQFPSDTLFLESVKV 356
Query: 189 LEAKC 175
L+ KC
Sbjct: 357 LKLKC 361
[22][TOP]
>UniRef100_UPI00016E11AB UPI00016E11AB related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AB
Length = 347
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -1
Query: 402 QNVFDIEDMGK-GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
+ V D+ED GKK A VA R T +E +R DDL + V LG ++HFIF +E+TG L
Sbjct: 260 RGVIDLEDSNAPGKKVAKVANSRLDTCSREVLRHDDLKNVVKLGRHRDHFIFTVETTGIL 319
Query: 225 PPEVLFTEAVKILEAKCE 172
PP+VL TEA+K+L KC+
Sbjct: 320 PPDVLVTEAIKVLMTKCQ 337
[23][TOP]
>UniRef100_B7Q825 Transferase, putative n=1 Tax=Ixodes scapularis RepID=B7Q825_IXOSC
Length = 344
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
+ V ++++ G K A VA R T + + DDL D V+L VK+HFIF++ESTG+ P
Sbjct: 255 KGVIELDETDDGHKVARVANARADTCSRNVFQYDDLKDAVELTRVKDHFIFSVESTGAYP 314
Query: 222 PEVLFTEAVKILEAKCEA 169
P++L TEA+K+L AKC+A
Sbjct: 315 PDLLVTEAIKVLMAKCQA 332
[24][TOP]
>UniRef100_Q4RCT8 Chromosome undetermined SCAF18092, whole genome shotgun sequence.
(Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4RCT8_TETNG
Length = 128
Score = 74.3 bits (181), Expect = 4e-12
Identities = 40/75 (53%), Positives = 50/75 (66%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V D+ED G+K A VA R T +E +R DDL V LG ++HFIF +ESTG LPPE
Sbjct: 43 VIDLEDPN-GRKVARVANSRLDTCSREVLRHDDLKKVVKLGRRRDHFIFTVESTGILPPE 101
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+K+L KC+
Sbjct: 102 VLVTEAIKVLMNKCQ 116
[25][TOP]
>UniRef100_UPI0000EDC949 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0000EDC949
Length = 346
Score = 73.9 bits (180), Expect = 5e-12
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V I+++ KGKK A VA PR T +E R D+L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIQIQEI-KGKKVAVVANPRLETFSREVFRHDELKKLVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+KIL KC D
Sbjct: 320 VLVSEAIKILMGKCRRFLD 338
[26][TOP]
>UniRef100_C0NBQ0 DNA-directed RNA polymerase I and III polypeptide n=1
Tax=Ajellomyces capsulatus G186AR RepID=C0NBQ0_AJECG
Length = 380
Score = 73.9 bits (180), Expect = 5e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGEKKAVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRRL 366
[27][TOP]
>UniRef100_A6R4R6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Ajellomyces capsulatus NAm1 RepID=A6R4R6_AJECN
Length = 380
Score = 73.9 bits (180), Expect = 5e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGEKKAVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRRL 366
[28][TOP]
>UniRef100_B0EJB9 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0EJB9_ENTDI
Length = 291
Score = 73.6 bits (179), Expect = 7e-12
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED V PR C +C+EC+R++ +++ LG +NH++F++ESTG
Sbjct: 205 PLNVFDIED-----GELIVKNPRNCKMCRECIREERS-EYIKLGREENHYLFSVESTGIY 258
Query: 225 PPEVLFTEAVKILEAKCEAI 166
P + +F+EAVKI+++K E +
Sbjct: 259 PAKEIFSEAVKIMKSKAEKL 278
[29][TOP]
>UniRef100_B8MRS0 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MRS0_TALSN
Length = 373
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P K T+ +EC+R D+ D V LG V++HFIFNIESTG P + LF E+V +
Sbjct: 297 GEDKAVVVDPFKDTVSRECLRHDEFKDKVKLGRVRDHFIFNIESTGQFPSDTLFLESVTV 356
Query: 189 LEAKC 175
L+ KC
Sbjct: 357 LKLKC 361
[30][TOP]
>UniRef100_A9V9D0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9D0_MONBE
Length = 363
Score = 73.2 bits (178), Expect = 9e-12
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V DI KG+ A + PR T+ +E R DDL D V+L V++HFIF++ES G+L P+
Sbjct: 261 VCDIVKNSKGEDEAKIVNPRADTVSREVFRHDDLRDKVELNRVRDHFIFSVESVGALAPD 320
Query: 216 VLFTEAVKILEAKCEAITDF 157
VL A++ L++KC+ + DF
Sbjct: 321 VLVLMALQELKSKCQRVIDF 340
[31][TOP]
>UniRef100_B3S4F3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S4F3_TRIAD
Length = 349
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V I+++ KG K A + +PR T ++ +RD +L +HV L +++HFIF IESTGS+
Sbjct: 258 PEGVIGIKEI-KGIKTAYIDKPRLDTCSRQVLRDPELKEHVILNKIRDHFIFCIESTGSI 316
Query: 225 PPEVLFTEAVKILEAKC 175
PP +F E+VKIL KC
Sbjct: 317 PPADIFRESVKILRQKC 333
[32][TOP]
>UniRef100_C5FSZ3 DNA-directed RNA polymerase I and III subunit RPAC1 n=1
Tax=Microsporum canis CBS 113480 RepID=C5FSZ3_NANOT
Length = 380
Score = 72.8 bits (177), Expect = 1e-11
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R D+ V LG V++HFIFNIESTG +++F E++K
Sbjct: 297 EGEKKAVVVDPFKDTVSRECLRHDEFKGKVKLGRVRDHFIFNIESTGQFNSDLMFLESIK 356
Query: 192 ILEAKCEAI 166
+L+ KC+ +
Sbjct: 357 VLKLKCQRL 365
[33][TOP]
>UniRef100_C4JJM6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JJM6_UNCRE
Length = 378
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
KG+K+A V P K T+ +EC+R ++ D V LG +++HFIFNIES G ++LF E+VK
Sbjct: 294 KGEKKAVVVDPFKDTVSRECLRHEEFKDKVKLGRIRDHFIFNIESVGQFNSDLLFIESVK 353
Query: 192 ILEAKC 175
+L KC
Sbjct: 354 VLRLKC 359
[34][TOP]
>UniRef100_C6HA00 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces
capsulatus H143 RepID=C6HA00_AJECH
Length = 380
Score = 72.4 bits (176), Expect = 1e-11
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+ V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGEKKVVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRRL 366
[35][TOP]
>UniRef100_Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Bos
taurus RepID=RPAC1_BOVIN
Length = 346
Score = 72.4 bits (176), Expect = 1e-11
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R++ L V L V++HFIF++ESTG LPP+
Sbjct: 261 VIEVQEI-QGKKVARVANPRLDTFSREVFRNEKLKKVVRLARVRDHFIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC+ D
Sbjct: 320 VLVSEAIKVLMGKCQRFLD 338
[36][TOP]
>UniRef100_UPI0000E80092 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 1 n=1
Tax=Gallus gallus RepID=UPI0000E80092
Length = 300
Score = 72.0 bits (175), Expect = 2e-11
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +I+++ KGKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+
Sbjct: 215 VIEIQNI-KGKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPD 273
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+KIL KC+
Sbjct: 274 VLVTEAIKILMGKCQ 288
[37][TOP]
>UniRef100_UPI00003ACD10 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 2 n=1
Tax=Gallus gallus RepID=UPI00003ACD10
Length = 346
Score = 72.0 bits (175), Expect = 2e-11
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +I+++ KGKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+
Sbjct: 261 VIEIQNI-KGKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPD 319
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+KIL KC+
Sbjct: 320 VLVTEAIKILMGKCQ 334
[38][TOP]
>UniRef100_Q6DRM8 RNA polymerase I 140 kDa subunit n=1 Tax=Danio rerio
RepID=Q6DRM8_DANRE
Length = 343
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E++ G+K A V R T +E +R DDL V LG V++HFIF++ESTG LPP+
Sbjct: 258 VIELENVN-GRKVAKVVNSRLDTCSREVLRHDDLKSLVKLGRVRDHFIFSVESTGILPPD 316
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+ +L +KC+
Sbjct: 317 VLVTEAINVLMSKCQ 331
[39][TOP]
>UniRef100_A2ATX1 Polymerase (RNA) I polypeptide C n=2 Tax=Danio rerio
RepID=A2ATX1_DANRE
Length = 362
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E++ G+K A V R T +E +R DDL V LG V++HFIF++ESTG LPP+
Sbjct: 277 VIELENVN-GRKVAKVVNSRLDTCSREVLRHDDLKSLVKLGRVRDHFIFSVESTGILPPD 335
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+ +L +KC+
Sbjct: 336 VLVTEAINVLMSKCQ 350
[40][TOP]
>UniRef100_UPI00017F0A34 PREDICTED: RNA polymerase I subunit hRPA39 n=1 Tax=Sus scrofa
RepID=UPI00017F0A34
Length = 346
Score = 71.2 bits (173), Expect = 3e-11
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R+D L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIEVQEI-QGKKVARVANPRLDTFSREVFRNDMLKKVVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 320 VLVSEAIKVLMGKCRRFLD 338
[41][TOP]
>UniRef100_C5GBG6 DNA-directed RNA polymerase I and III polypeptide n=2
Tax=Ajellomyces dermatitidis RepID=C5GBG6_AJEDR
Length = 380
Score = 71.2 bits (173), Expect = 3e-11
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGEKKAVVLDPFKDTVSRECLRHEEFRGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRRL 366
[42][TOP]
>UniRef100_C1H4P1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb01
RepID=C1H4P1_PARBA
Length = 380
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGAKKAVVLDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRKL 366
[43][TOP]
>UniRef100_C0SF50 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb03
RepID=C0SF50_PARBP
Length = 345
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 263 EGAKKAVVLDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 322
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 323 VLKLKCRKL 331
[44][TOP]
>UniRef100_A2QD13 Complex: RCP40 of S. cerevisiae associates with RCP19 of S.
cerevisiae n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QD13_ASPNC
Length = 359
Score = 70.9 bits (172), Expect = 4e-11
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V +E +G+ +A V P K T+ +EC+R ++ V LG V++HFIFNIES G
Sbjct: 271 PSGVIGLEKGHEGELKAVVVDPFKDTVSRECLRHEEFQGKVKLGRVRDHFIFNIESVGQF 330
Query: 225 PPEVLFTEAVKILEAKC 175
+ LF E+VK+L+ KC
Sbjct: 331 ESDTLFLESVKVLKLKC 347
[45][TOP]
>UniRef100_UPI000186EDAD DNA-directed RNA polymerase I 40 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186EDAD
Length = 347
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +I + +G+K A VA R + + R +DL D V++ V+NHFIFNIES G++PP
Sbjct: 255 VIEIRENDEGEKEAYVASARYDSGSRIVFRQEDLKDCVEMKRVRNHFIFNIESVGAIPPN 314
Query: 216 VLFTEAVKILEAKC 175
LF EAVK+L+ KC
Sbjct: 315 ELFVEAVKVLKNKC 328
[46][TOP]
>UniRef100_UPI000175846B PREDICTED: similar to CG3756 CG3756-PA n=1 Tax=Tribolium castaneum
RepID=UPI000175846B
Length = 338
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
KG+K A VA R T + R +DL D V + +++HFIF +ES G+LPP+V+F EAVK
Sbjct: 263 KGRKYAVVANARYDTGSRNVFRYEDLKDAVAMTKIQDHFIFTVESVGALPPDVIFMEAVK 322
Query: 192 ILEAKCEAITD 160
IL+ KC A+ D
Sbjct: 323 ILKDKCLALLD 333
[47][TOP]
>UniRef100_UPI0000D6145A DNA-directed RNA polymerases I and III subunit RPAC1 (RNA
polymerases I and III subunit AC1) (DNA-directed RNA
polymerase I subunit C) (DNA- directed RNA polymerases I
and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
(AC40). n=1 Tax=Homo sapiens RepID=UPI0000D6145A
Length = 210
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = -1
Query: 375 GKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 196
G GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+
Sbjct: 131 GIGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAI 190
Query: 195 KILEAKCEAITD 160
K+L KC D
Sbjct: 191 KVLMGKCRRFLD 202
[48][TOP]
>UniRef100_UPI000059D8D9 UPI000059D8D9 related cluster n=1 Tax=Homo sapiens
RepID=UPI000059D8D9
Length = 169
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = -1
Query: 375 GKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 196
G GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+
Sbjct: 90 GIGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAI 149
Query: 195 KILEAKCEAITD 160
K+L KC D
Sbjct: 150 KVLMGKCRRFLD 161
[49][TOP]
>UniRef100_Q5JTD9 Polymerase (RNA) I polypeptide C, 30kDa (Fragment) n=1 Tax=Homo
sapiens RepID=Q5JTD9_HUMAN
Length = 168
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = -1
Query: 375 GKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 196
G GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+
Sbjct: 89 GIGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAI 148
Query: 195 KILEAKCEAITD 160
K+L KC D
Sbjct: 149 KVLMGKCRRFLD 160
[50][TOP]
>UniRef100_C1GK69 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Paracoccidioides brasiliensis Pb18
RepID=C1GK69_PARBD
Length = 380
Score = 70.5 bits (171), Expect = 6e-11
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK
Sbjct: 298 EGAKKAVVLDPFKDTVSRECLRHEEFRGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357
Query: 192 ILEAKCEAI 166
+L+ KC +
Sbjct: 358 VLKLKCRKL 366
[51][TOP]
>UniRef100_O15160 DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Homo
sapiens RepID=RPAC1_HUMAN
Length = 346
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/79 (44%), Positives = 53/79 (67%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIEVQEV-QGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 320 VLVSEAIKVLMGKCRRFLD 338
[52][TOP]
>UniRef100_UPI000155FEE2 PREDICTED: similar to DNA-directed RNA polymerases I and III
subunit RPAC1 (RNA polymerases I and III subunit AC1)
(DNA-directed RNA polymerase I subunit C) (DNA-directed
RNA polymerases I and III 40 kDa polypeptide) (RPA40)
(RPA39) (RPC40) (AC40) n=1 Tax=Equus caballus
RepID=UPI000155FEE2
Length = 346
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIEVQEV-QGKKVARVANPRLDTFSREVFRHEKLKKVVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 320 VLVSEAIKVLMGKCRRFLD 338
[53][TOP]
>UniRef100_UPI0000D9AD00 PREDICTED: RNA polymerase I subunit n=1 Tax=Macaca mulatta
RepID=UPI0000D9AD00
Length = 291
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+
Sbjct: 206 VIEVQEV-QGKKVARVANPRLDTFSREIFRHEKLKKVVRLARVRDHYIFSVESTGVLPPD 264
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 265 VLVSEAIKVLMGKCRRFLD 283
[54][TOP]
>UniRef100_UPI00005A26F6 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 4 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F6
Length = 296
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = -1
Query: 375 GKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 196
G GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+
Sbjct: 217 GIGKKVARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAI 276
Query: 195 KILEAKCEAITD 160
K+L KC D
Sbjct: 277 KVLMGKCRRFLD 288
[55][TOP]
>UniRef100_UPI00004A557E PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 1 n=1 Tax=Canis
lupus familiaris RepID=UPI00004A557E
Length = 346
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +++++ +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIEVQEV-QGKKVARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+K+L KC D
Sbjct: 320 VLVSEAIKVLMGKCRRFLD 338
[56][TOP]
>UniRef100_C5LDA1 DNA-directed RNA polymerases I and III 40 kDa polypeptide, putative
n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LDA1_9ALVE
Length = 365
Score = 69.3 bits (168), Expect = 1e-10
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDD-LVDHVDLGSVKNHFIFNIESTGS 229
P VFDIED A V PR CT C++C+ + D V LG +K+HFIF +ES G
Sbjct: 260 PMGVFDIEDGA-----AVVKNPRACTTCRQCIEPGNGFADKVSLGKLKDHFIFTVESVGQ 314
Query: 228 LPPEVLFTEAVKILEAKCEAI 166
+P +F +A +++ KC +
Sbjct: 315 IPAPQIFAQAAVVMQNKCRLV 335
[57][TOP]
>UniRef100_C5L9Q7 DNA-directed RNA polymerase I, putative n=1 Tax=Perkinsus marinus
ATCC 50983 RepID=C5L9Q7_9ALVE
Length = 310
Score = 69.3 bits (168), Expect = 1e-10
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDD-LVDHVDLGSVKNHFIFNIESTGS 229
P VFDIED A V PR CT C++C+ + D V LG +K+HFIF +ES G
Sbjct: 205 PMGVFDIEDGA-----AVVKNPRACTTCRQCIEPGNGFADKVSLGKLKDHFIFTVESVGQ 259
Query: 228 LPPEVLFTEAVKILEAKCEAI 166
+P +F +A +++ KC +
Sbjct: 260 IPAPQIFAQAAVVMQNKCRLV 280
[58][TOP]
>UniRef100_Q1DYH9 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1DYH9_COCIM
Length = 382
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R ++ V LG V++HFIFNIES G ++LF E+VK
Sbjct: 298 EGQKKAVVVDPFKDTVSRECLRHEEFKGKVKLGRVRDHFIFNIESVGQFNSDLLFLESVK 357
Query: 192 ILEAKC 175
+L+ KC
Sbjct: 358 VLKLKC 363
[59][TOP]
>UniRef100_C5P1D3 DNA-directed RNA polymerase, putative n=1 Tax=Coccidioides
posadasii C735 delta SOWgp RepID=C5P1D3_COCP7
Length = 382
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V P K T+ +EC+R ++ V LG V++HFIFNIES G ++LF E+VK
Sbjct: 298 EGEKKAVVVDPFKDTVSRECLRHEEFKGKVKLGRVRDHFIFNIESVGQFNSDLLFLESVK 357
Query: 192 ILEAKC 175
+L+ KC
Sbjct: 358 VLKLKC 363
[60][TOP]
>UniRef100_B5X7Z3 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Salmo
salar RepID=B5X7Z3_SALSA
Length = 353
Score = 68.9 bits (167), Expect = 2e-10
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E+ G GK A V R T +E +R DDL + V L V++HFIF++ESTG L P+
Sbjct: 268 VIEVENHG-GKVVAKVVNSRLDTCSREVLRHDDLKNAVKLARVRDHFIFSVESTGILAPD 326
Query: 216 VLFTEAVKILEAKCE 172
VL TEA+K+L KC+
Sbjct: 327 VLVTEAIKVLMTKCQ 341
[61][TOP]
>UniRef100_Q0UUA6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UUA6_PHANO
Length = 350
Score = 68.9 bits (167), Expect = 2e-10
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V P K T+ +EC+R + D V+LG +++HFIF +ESTG + LF E+VK
Sbjct: 273 EGESKAVVDDPMKDTVSRECLRHPEFKDKVNLGRIRDHFIFRVESTGQWESDELFLESVK 332
Query: 192 ILEAKCEAI 166
+L+ KC+ I
Sbjct: 333 LLKVKCQRI 341
[62][TOP]
>UniRef100_UPI000194C203 PREDICTED: polymerase (RNA) I polypeptide C, 30kDa n=1
Tax=Taeniopygia guttata RepID=UPI000194C203
Length = 346
Score = 68.6 bits (166), Expect = 2e-10
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +I+++ GKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+
Sbjct: 261 VIEIQNIN-GKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPD 319
Query: 216 VLFTEAVKILEAKCE 172
VL +EA+KIL KC+
Sbjct: 320 VLVSEAIKILMGKCQ 334
[63][TOP]
>UniRef100_A1L3C2 Polr1c protein n=2 Tax=Mus musculus RepID=A1L3C2_MOUSE
Length = 347
Score = 68.6 bits (166), Expect = 2e-10
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E++ +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+
Sbjct: 262 VIEVEEV-QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPD 320
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+KIL KC D
Sbjct: 321 VLVSEAIKILMGKCRRFLD 339
[64][TOP]
>UniRef100_P52432 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Mus
musculus RepID=RPAC1_MOUSE
Length = 346
Score = 68.6 bits (166), Expect = 2e-10
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E++ +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+
Sbjct: 261 VIEVEEV-QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPD 319
Query: 216 VLFTEAVKILEAKCEAITD 160
VL +EA+KIL KC D
Sbjct: 320 VLVSEAIKILMGKCRRFLD 338
[65][TOP]
>UniRef100_UPI0000E468FB PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E468FB
Length = 335
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V D+E G A VA PR+ T +E DDL D V L +++HFIF++ESTG+L PE
Sbjct: 246 VIDVEKRN-GVPVAVVACPRRDTCGREVFSHDDLKDCVKLNRIRDHFIFSVESTGALRPE 304
Query: 216 VLFTEAVKILEAKCE 172
VL +EA+ IL++KC+
Sbjct: 305 VLVSEAINILKSKCK 319
[66][TOP]
>UniRef100_C1BKA8 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Osmerus
mordax RepID=C1BKA8_OSMMO
Length = 351
Score = 68.2 bits (165), Expect = 3e-10
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++E+ GK A V R T +E +R DDL + V L V++HFIF++ESTG LPP+
Sbjct: 266 VIELENCN-GKVIAKVVNSRPDTCSREVLRHDDLKNLVKLARVRDHFIFSVESTGILPPD 324
Query: 216 VLFTEAVKILEAKC 175
V+ TEA+K+L +KC
Sbjct: 325 VVVTEAIKVLMSKC 338
[67][TOP]
>UniRef100_B2WCA1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1
Tax=Pyrenophora tritici-repentis Pt-1C-BFP
RepID=B2WCA1_PYRTR
Length = 376
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A VA P T+ +EC+R + D V LG +++HFIF +ESTG + LF E+VK
Sbjct: 299 EGEPKAVVANPMNDTVSRECLRHPEFKDKVKLGRIRDHFIFRVESTGQWESDELFLESVK 358
Query: 192 ILEAKCEAI 166
+L+ KC+ I
Sbjct: 359 LLKIKCQRI 367
[68][TOP]
>UniRef100_Q4X0E8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus fumigatus RepID=Q4X0E8_ASPFU
Length = 374
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+
Sbjct: 298 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357
Query: 189 LEAKC 175
L+ KC
Sbjct: 358 LKLKC 362
[69][TOP]
>UniRef100_B8NHK8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=2
Tax=Aspergillus RepID=B8NHK8_ASPFN
Length = 373
Score = 67.0 bits (162), Expect = 6e-10
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V K T+ +EC+R ++ V LG V++HFIFNIESTG +VLF E+VK
Sbjct: 296 EGETKAVVRDAFKDTVSRECLRHEEFQGKVKLGRVRDHFIFNIESTGQFDSDVLFLESVK 355
Query: 192 ILEAKC 175
+L+ KC
Sbjct: 356 VLKLKC 361
[70][TOP]
>UniRef100_B0XTN4 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus fumigatus A1163 RepID=B0XTN4_ASPFC
Length = 414
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+
Sbjct: 338 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 397
Query: 189 LEAKC 175
L+ KC
Sbjct: 398 LKLKC 402
[71][TOP]
>UniRef100_A1DHS7 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1DHS7_NEOFI
Length = 374
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+
Sbjct: 298 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357
Query: 189 LEAKC 175
L+ KC
Sbjct: 358 LKLKC 362
[72][TOP]
>UniRef100_UPI0001B7A7D1 UPI0001B7A7D1 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A7D1
Length = 260
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K
Sbjct: 182 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 241
Query: 192 ILEAKCEAITD 160
IL KC D
Sbjct: 242 ILMGKCRRFLD 252
[73][TOP]
>UniRef100_Q6IP84 MGC78824 protein n=1 Tax=Xenopus laevis RepID=Q6IP84_XENLA
Length = 347
Score = 66.6 bits (161), Expect = 8e-10
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = -1
Query: 381 DMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTE 202
D GK+ A V R T +E R DDL + V + V++H+IF++ESTG LPP++L +E
Sbjct: 266 DEVNGKRVARVENARMDTCSREIFRHDDLKNLVRMARVRDHYIFSVESTGILPPDILVSE 325
Query: 201 AVKILEAKCEAITD 160
A+K+L KC D
Sbjct: 326 AIKVLMGKCRRFLD 339
[74][TOP]
>UniRef100_Q5RJK9 Polymerase (RNA) I polypeptide C n=2 Tax=Rattus norvegicus
RepID=Q5RJK9_RAT
Length = 346
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K
Sbjct: 268 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327
Query: 192 ILEAKCEAITD 160
IL KC D
Sbjct: 328 ILMGKCRRFLD 338
[75][TOP]
>UniRef100_Q6CQS0 KLLA0D14861p n=1 Tax=Kluyveromyces lactis RepID=Q6CQS0_KLULA
Length = 334
Score = 66.6 bits (161), Expect = 8e-10
Identities = 32/78 (41%), Positives = 52/78 (66%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V D+ + G+ A + PRK T+ +E +R D+ V LG V++HFIFN+ES+G++
Sbjct: 252 PKGVADVNEKGE----AYIKDPRKDTVSREVLRHDEFQGKVKLGRVRDHFIFNVESSGAM 307
Query: 225 PPEVLFTEAVKILEAKCE 172
PE +F ++V+IL+ K E
Sbjct: 308 TPEEIFFKSVRILKNKAE 325
[76][TOP]
>UniRef100_UPI00015B4B82 PREDICTED: similar to bifunctional aminoacyl-tRNA synthetase n=1
Tax=Nasonia vitripennis RepID=UPI00015B4B82
Length = 1549
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V +I + KGK+ A V R + + R DDL D V LG V +HFIF +ES G+LP
Sbjct: 1466 VIEIVETTKGKE-ARVKNARYDSCSRNVFRHDDLKDCVQLGRVPDHFIFTVESVGALPSS 1524
Query: 216 VLFTEAVKILEAKCE 172
VLF EAVK+L+ KC+
Sbjct: 1525 VLFIEAVKVLKKKCK 1539
[77][TOP]
>UniRef100_UPI00019261EE PREDICTED: similar to DNA-directed RNA polymerases I and III
subunit RPAC1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019261EE
Length = 354
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G RA V PRK + +E R++ L V L V++HFI+++ESTG+LPP+VL EA+KI
Sbjct: 278 GITRAVVDNPRKDSGMREIYRNEILKKIVKLEKVRDHFIYSVESTGALPPDVLVEEAIKI 337
Query: 189 LEAKC 175
L AKC
Sbjct: 338 LHAKC 342
[78][TOP]
>UniRef100_C8VNX6 DNA-directed RNA polymerase I and III subunit Rpc40, putative
(AFU_orthologue; AFUA_2G13720) n=2 Tax=Emericella
nidulans RepID=C8VNX6_EMENI
Length = 373
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V T+ +EC+R D+ V LG +++HFIFNIESTG +VLF E+VK+
Sbjct: 297 GELKAVVRDAFNDTVSRECLRHDEFKGKVKLGRIRDHFIFNIESTGQFDSDVLFLESVKV 356
Query: 189 LEAKC 175
L+ KC
Sbjct: 357 LKLKC 361
[79][TOP]
>UniRef100_B3LK74 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=3
Tax=Saccharomyces cerevisiae RepID=B3LK74_YEAS1
Length = 335
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I++ G A V RK T+ +E +R ++ D V LG V+NHFIFN+ES+G++
Sbjct: 252 PPGVIGIDE---GSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESSGAM 308
Query: 225 PPEVLFTEAVKILEAKCE 172
PE +F ++V+IL+ K E
Sbjct: 309 TPEEIFFKSVRILKNKAE 326
[80][TOP]
>UniRef100_UPI00004DA7E9 DNA-directed RNA polymerases I and III subunit RPAC1 (RNA
polymerases I and III subunit AC1) (DNA-directed RNA
polymerase I subunit C) (DNA- directed RNA polymerases I
and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
(AC40). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00004DA7E9
Length = 347
Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
GK+ A V R T +E R DDL D V + V++++IF++ESTG LPP++L +EA+K+
Sbjct: 270 GKRVARVINARTDTCGREIFRHDDLKDLVRMARVRDYYIFSVESTGILPPDILVSEAIKV 329
Query: 189 LEAKCEAITD 160
L KC D
Sbjct: 330 LMGKCRRFLD 339
[81][TOP]
>UniRef100_Q5KIG6 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q5KIG6_CRYNE
Length = 350
Score = 65.1 bits (157), Expect = 2e-09
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V +IE G+ + V PRK T+ +E +R + D V L +++HFIFN+ES G
Sbjct: 256 PPGVIEIEKDENGEDQCVVKNPRKDTVSREVLRHPEFQDLVQLARIRDHFIFNVESAGQY 315
Query: 225 PPEVLFTEAVKILEAKCEAITD 160
PE L EA+KIL K + + +
Sbjct: 316 SPEELVPEAIKILLGKIKDVEE 337
[82][TOP]
>UniRef100_P07703 DNA-directed RNA polymerases I and III subunit RPAC1 n=3
Tax=Saccharomyces cerevisiae RepID=RPAC1_YEAST
Length = 335
Score = 65.1 bits (157), Expect = 2e-09
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I++ G A V RK T+ +E +R ++ D V LG V+NHFIFN+ES G++
Sbjct: 252 PPGVIGIDE---GSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAM 308
Query: 225 PPEVLFTEAVKILEAKCE 172
PE +F ++V+IL+ K E
Sbjct: 309 TPEEIFFKSVRILKNKAE 326
[83][TOP]
>UniRef100_A1C7I5 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1
Tax=Aspergillus clavatus RepID=A1C7I5_ASPCL
Length = 374
Score = 64.7 bits (156), Expect = 3e-09
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+ +A V P T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+
Sbjct: 298 GELKAVVRDPFNDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357
Query: 189 LEAKC 175
L+ KC
Sbjct: 358 LKLKC 362
[84][TOP]
>UniRef100_B6KLD3 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=2
Tax=Toxoplasma gondii RepID=B6KLD3_TOXGO
Length = 346
Score = 64.3 bits (155), Expect = 4e-09
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P VFDIED A PR CT C+ C+ + ++L +K+HFIF+IESTGS+
Sbjct: 260 PMGVFDIEDT---TGEAYARYPRNCTTCRACI--ERFPKEIELRKIKDHFIFSIESTGSV 314
Query: 225 PPEVLFTEAVKILEAK 178
P +LF A++IL+ K
Sbjct: 315 PAPLLFKMAIEILKEK 330
[85][TOP]
>UniRef100_B6GYD0 Pc12g12250 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6GYD0_PENCW
Length = 374
Score = 63.9 bits (154), Expect = 5e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G+++A V T+ +EC+R ++ V LG V++HFIFN+ESTG ++LF EA+K+
Sbjct: 298 GEQKAVVKDAFNDTVSRECLRHEEFQGKVKLGRVRDHFIFNVESTGQFESDMLFLEAIKV 357
Query: 189 LEAKC 175
++ KC
Sbjct: 358 MKLKC 362
[86][TOP]
>UniRef100_UPI00005A26F7 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 5 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F7
Length = 338
Score = 63.5 bits (153), Expect = 7e-09
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K+L K
Sbjct: 265 ARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGK 324
Query: 177 CEAITD 160
C D
Sbjct: 325 CRRFLD 330
[87][TOP]
>UniRef100_A7ECC0 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ECC0_SCLS1
Length = 387
Score = 63.5 bits (153), Expect = 7e-09
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+K+A V + T+ +EC+R ++ V LG V++HFIF+IES G + LF E++K
Sbjct: 310 EGEKKAVVVDAMRDTVSRECLRHEEFQGKVKLGRVRDHFIFSIESLGQWDSDELFLESIK 369
Query: 192 ILEAKCEA 169
L KCEA
Sbjct: 370 TLRTKCEA 377
[88][TOP]
>UniRef100_A4HA24 DNA-directed RNA polymerase, alpha subunit,putative n=1
Tax=Leishmania braziliensis RepID=A4HA24_LEIBR
Length = 446
Score = 62.8 bits (151), Expect = 1e-08
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLV--------DHVDLGSVKNHFIF 250
P VF ED KG ATV P KCTLC+EC+R DD D V + K H IF
Sbjct: 339 PAGVFGYEDGQKGAA-ATVLAPEKCTLCRECLRSDDNAGAAAASEGDRVRVQKDKTHVIF 397
Query: 249 NIESTGSLPPEVLFTEAVKILEAKCEAITD 160
+IES G L P + +++ +C A+ +
Sbjct: 398 HIESVGQLHPAQILRFGLRLFAERCRALAE 427
[89][TOP]
>UniRef100_Q0CY78 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0CY78_ASPTN
Length = 374
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V T+ +EC+R ++ V LG V++HFIFN+ES+G +VLF E+VK
Sbjct: 297 EGEMKAVVRDAFNDTVSRECLRHEEFQGKVKLGRVRDHFIFNVESSGQFNSDVLFLESVK 356
Query: 192 ILEAKC 175
+L+ KC
Sbjct: 357 VLKLKC 362
[90][TOP]
>UniRef100_UPI000186AA5B hypothetical protein BRAFLDRAFT_133039 n=1 Tax=Branchiostoma
floridae RepID=UPI000186AA5B
Length = 308
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G K+A V R T +E R DL D V L +++HFIF++ESTG+L P+VL EA K+
Sbjct: 225 GVKKARVVNSRLDTCSREIFRHPDLKDCVKLNKLRDHFIFSVESTGALAPDVLVCEATKV 284
Query: 189 LEAKC 175
L KC
Sbjct: 285 LMGKC 289
[91][TOP]
>UniRef100_C3Z3J6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z3J6_BRAFL
Length = 290
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = -1
Query: 369 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 190
G K+A V R T +E R DL D V L +++HFIF++ESTG+L P+VL EA K+
Sbjct: 207 GVKKARVVNSRLDTCSREIFRHPDLKDCVKLNKLRDHFIFSVESTGALAPDVLVCEATKV 266
Query: 189 LEAKC 175
L KC
Sbjct: 267 LMGKC 271
[92][TOP]
>UniRef100_B6AC64 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AC64_9CRYT
Length = 351
Score = 62.0 bits (149), Expect = 2e-08
Identities = 34/82 (41%), Positives = 46/82 (56%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P NVFDIED+ + V PR CT C+ C+ + V++ K+HFIF+IESTGS+
Sbjct: 268 PMNVFDIEDI---TGKVYVKNPRNCTTCRACI--EKFPKKVEIFKNKHHFIFSIESTGSI 322
Query: 225 PPEVLFTEAVKILEAKCEAITD 160
P L A+ IL K I +
Sbjct: 323 SPIQLVKTAINILREKSHKINN 344
[93][TOP]
>UniRef100_A6RP60 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RP60_BOTFB
Length = 389
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V + T+ +EC+R ++ V LG V++HFIF+IES G + LF E++K
Sbjct: 312 EGEDKAVVVDAMRDTVSRECLRHEEFQGKVKLGRVRDHFIFSIESLGQWDSDELFLESIK 371
Query: 192 ILEAKCEA 169
L KCEA
Sbjct: 372 TLRTKCEA 379
[94][TOP]
>UniRef100_UPI000151BDE7 conserved hypothetical protein n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151BDE7
Length = 333
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
Q F +G A V RK T+ +E +R ++ V LG +++HFIFN+ESTG++P
Sbjct: 248 QKCFPSGVIGIENDTAFVKDARKDTVSREVLRHEEFNGKVKLGRIRDHFIFNVESTGAMP 307
Query: 222 PEVLFTEAVKILEAKCE 172
PE +F ++V++L+ K +
Sbjct: 308 PEEIFFKSVRVLKNKAD 324
[95][TOP]
>UniRef100_C1E0F4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E0F4_9CHLO
Length = 394
Score = 60.8 bits (146), Expect = 4e-08
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = -1
Query: 393 FDIEDMGKGKKRATVAQPRKCTLCKECVR----DDDLVDHVDLGSVKNHFIFNIESTGSL 226
F+ + KG+K V R C C E VR + + V + K+HFIF +E+ G L
Sbjct: 311 FEKDGGKKGEKCVKVVNERGCDYCLERVRTLCGEPGWDEKVRVLKSKSHFIFTVETAGQL 370
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PP+VLF EAVK+L +KC+++
Sbjct: 371 PPDVLFKEAVKVLASKCQSV 390
[96][TOP]
>UniRef100_Q6FXP6 Strain CBS138 chromosome B complete sequence n=1 Tax=Candida
glabrata RepID=Q6FXP6_CANGA
Length = 334
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V I + G+ A V PRK T+ +E +R ++ V LG V++HF+FN+ESTG++
Sbjct: 252 PKGVIGINENGE----AYVLDPRKDTVSREVLRHEEFEGKVKLGRVRDHFVFNVESTGAM 307
Query: 225 PPEVLFTEAVKILEAKCE 172
PE + +++ IL+ K E
Sbjct: 308 QPEDIVLKSIDILKKKAE 325
[97][TOP]
>UniRef100_Q6BV37 DEHA2C05654p n=1 Tax=Debaryomyces hansenii RepID=Q6BV37_DEBHA
Length = 335
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V DI G+ A V RK T+ +E +R ++ V LG ++HFIFN+ESTG++
Sbjct: 253 PSGVIDINKNGE----AVVKDSRKDTVSREVLRHEEFNGKVKLGRKRDHFIFNVESTGAM 308
Query: 225 PPEVLFTEAVKILEAKCE 172
PE +F ++V++L+ K E
Sbjct: 309 SPEEIFFKSVRVLKNKAE 326
[98][TOP]
>UniRef100_A5DPW5 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DPW5_PICGU
Length = 333
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
Q F +G A V RK T+ +E +R ++ V LG +++HFIFN+ESTG++P
Sbjct: 248 QKCFPSGVIGIENDTAFVKDARKDTVSREVLRHEEFNGKVKLGRIRDHFIFNVESTGAMP 307
Query: 222 PEVLFTEAVKILEAKCE 172
PE +F ++V++L+ K +
Sbjct: 308 PEEIFFKSVRVLKNKAD 324
[99][TOP]
>UniRef100_UPI00002223F9 Hypothetical protein CBG01436 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI00002223F9
Length = 367
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
+ V IE G K+ A V RK T + R +DL V LG K HFIF++ESTG+L
Sbjct: 281 EGVIGIEKKG-AKRIAVVKDARKDTCSRNVFRHEDLAKVVQLGKNKQHFIFSVESTGALK 339
Query: 222 PEVLFTEAVKILEAKCEAI 166
L EA K++E KC ++
Sbjct: 340 SAELVVEACKVMETKCRSL 358
[100][TOP]
>UniRef100_B5Y3D1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B5Y3D1_PHATR
Length = 319
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = -1
Query: 390 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 211
D D ++A V P CT+ + +R +L V + + +HFIF++ES G P VL
Sbjct: 231 DATDPAGTSRKARVCNPYACTMSRNYMRHTELAQAVRMSRIPDHFIFSVESVGMYAPGVL 290
Query: 210 FTEAVKILEAKCEAITDF 157
EA++IL+ KC + D+
Sbjct: 291 VAEALRILQRKCRKVMDY 308
[101][TOP]
>UniRef100_A8WQE9 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae
RepID=A8WQE9_CAEBR
Length = 698
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
+ V IE G K+ A V RK T + R +DL V LG K HFIF++ESTG+L
Sbjct: 612 EGVIGIEKKG-AKRIAVVKDARKDTCSRNVFRHEDLAKVVQLGKNKQHFIFSVESTGALK 670
Query: 222 PEVLFTEAVKILEAKCEAI 166
L EA K++E KC ++
Sbjct: 671 SAELVVEACKVMETKCRSL 689
[102][TOP]
>UniRef100_C4R920 RNA polymerase subunit, common to RNA polymerase I and III n=1
Tax=Pichia pastoris GS115 RepID=C4R920_PICPG
Length = 335
Score = 60.5 bits (145), Expect = 6e-08
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V IE+ +A V R+ T+ +EC+R + V L ++HFIFN+ESTG +
Sbjct: 252 PKGVIAIEN-----GQAVVKDARRDTVSRECLRHPEFEGKVKLARQRDHFIFNVESTGCM 306
Query: 225 PPEVLFTEAVKILEAKCE 172
PPE +F ++V+IL+ K E
Sbjct: 307 PPEEIFFKSVRILKNKAE 324
[103][TOP]
>UniRef100_B8CCH8 Dna-directed RNA polymerase I 40kDa polypeptide, rpo1-1-like
protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CCH8_THAPS
Length = 351
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = -1
Query: 390 DIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 211
D ED G K +A ++ P CT+ + +R+ L + + + V NHFIF++ES G + P V+
Sbjct: 281 DDEDGGH-KVKAELSNPYACTMSRNYMRNPTLKESIKMSRVPNHFIFSVESVGMMEPAVI 339
Query: 210 FTEAVKILEAKC 175
+EA+K+L+ KC
Sbjct: 340 VSEALKVLKEKC 351
[104][TOP]
>UniRef100_Q29L21 GA17664 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q29L21_DROPS
Length = 333
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R + + R L D V LG V++H+IF +ES GSL P+V+F EAVK+L+ K
Sbjct: 263 AYVKDARYDSCSRNVYRYPQLEDSVTLGRVRDHYIFTVESVGSLKPDVIFLEAVKVLKKK 322
Query: 177 CEAITD 160
C A D
Sbjct: 323 CRAFID 328
[105][TOP]
>UniRef100_A7TPZ5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TPZ5_VANPO
Length = 320
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V DI + A V RK T+ +E +R ++ D V L V+NHFIFNIE+ G++
Sbjct: 238 PPGVIDINE----NDEAYVKDARKDTMTREVLRHEEFQDKVKLDRVRNHFIFNIETVGAM 293
Query: 225 PPEVLFTEAVKILEAKCE 172
E +F ++VKIL+ K E
Sbjct: 294 SAEEIFLKSVKILKNKAE 311
[106][TOP]
>UniRef100_Q9UAY9 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans
RepID=Q9UAY9_CAEEL
Length = 366
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLP 223
+ V IE G K+ A V RK T + R +DL V LG K HFIF++ESTG+L
Sbjct: 280 EGVIAIEKKG-AKRIAVVKDARKDTCSRNVFRHEDLSKVVQLGKNKQHFIFSVESTGALK 338
Query: 222 PEVLFTEAVKILEAKCEAI 166
L EA K++E KC ++
Sbjct: 339 SSELVVEACKVMEIKCRSL 357
[107][TOP]
>UniRef100_A4HY87 DNA-directed RNA polymerase, alpha subunit, putative n=1
Tax=Leishmania infantum RepID=A4HY87_LEIIN
Length = 442
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDL--------VDHVDLGSVKNHFIF 250
P VF E KG ATV P KCTLC+EC+R DD D V + K H +F
Sbjct: 335 PAGVFGYEGGQKGAA-ATVVAPEKCTLCRECLRSDDKGAEAAASEGDRVRVQKEKTHVLF 393
Query: 249 NIESTGSLPPEVLFTEAVKILEAKCEAITD 160
+IES G L P + +++ +C A+ +
Sbjct: 394 HIESVGQLHPAQILRFGLRLFAERCRALAE 423
[108][TOP]
>UniRef100_Q75A87 ADR031Cp n=1 Tax=Eremothecium gossypii RepID=Q75A87_ASHGO
Length = 364
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = -1
Query: 366 KKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKIL 187
K A V RK T+ +E +R +L V LG V++HFIFN+ES G++ PE +F ++V+IL
Sbjct: 291 KGEAFVQDARKDTVSREVLRHPELEQKVKLGRVRDHFIFNVESAGAMTPEEIFFKSVRIL 350
Query: 186 EAKCE 172
+ K E
Sbjct: 351 KNKAE 355
[109][TOP]
>UniRef100_C5DTY7 ZYRO0C12364p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DTY7_ZYGRC
Length = 335
Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V RK T+ +E +R ++ + V LG V++HF+FN+ESTG++ PE +F ++V++L+ K
Sbjct: 265 AYVQDARKDTVSREVLRHEEFSNKVKLGRVRDHFVFNVESTGAMTPEEIFFKSVRVLKNK 324
Query: 177 CE 172
E
Sbjct: 325 AE 326
[110][TOP]
>UniRef100_C5DLD4 KLTH0F12056p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DLD4_LACTC
Length = 350
Score = 59.3 bits (142), Expect = 1e-07
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V I D G+ A V R T+ +E +R ++ V LG VKNHFIFN+ES G++ PE
Sbjct: 271 VIGINDNGE----AFVKDARHDTVSREVLRHEEFEGKVKLGRVKNHFIFNVESAGAMTPE 326
Query: 216 VLFTEAVKILEAKCE 172
+F ++V+IL+ K E
Sbjct: 327 EIFFKSVRILKNKAE 341
[111][TOP]
>UniRef100_Q171Q8 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti
RepID=Q171Q8_AEDAE
Length = 335
Score = 58.9 bits (141), Expect = 2e-07
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = -1
Query: 360 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 181
+A V R + + R + D V L V+NHFIFN+ES G+L P+V+F EA K+L+
Sbjct: 264 QAYVKDARYDSCSRNVYRYPQIADAVTLSRVRNHFIFNVESLGALKPDVIFVEAAKVLKK 323
Query: 180 KCEAITD 160
KC+ D
Sbjct: 324 KCKMFLD 330
[112][TOP]
>UniRef100_B9WBJ1 DNA-directed RNA polymerases I and III subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9WBJ1_CANDC
Length = 336
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I+ GK A V RK T+ +E +R + V LG ++HFIFN+ESTG++
Sbjct: 254 PPGVIGIDTNGK----AYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAM 309
Query: 225 PPEVLFTEAVKILEAKCE 172
PP +F ++V++L+ K E
Sbjct: 310 PPAEIFFKSVRLLKNKAE 327
[113][TOP]
>UniRef100_C1MRA1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MRA1_9CHLO
Length = 410
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = -1
Query: 363 KRATVAQPRKCTLCKECVR----DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 196
+R R C C E VR + + V L K+HFIF +ESTG +PPE++F EAV
Sbjct: 337 RRVVAKNERGCEFCVERVRALSGEPGWEEKVQLLKKKDHFIFTVESTGQMPPELIFKEAV 396
Query: 195 KILEAKCEAI 166
+L +KC+++
Sbjct: 397 NVLASKCQSV 406
[114][TOP]
>UniRef100_Q59ZF5 Putative uncharacterized protein RPC40 n=1 Tax=Candida albicans
RepID=Q59ZF5_CANAL
Length = 369
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I+ GK A V RK T+ +E +R + V LG ++HFIFN+ESTG++
Sbjct: 287 PPGVIGIDANGK----AYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAM 342
Query: 225 PPEVLFTEAVKILEAKCE 172
PP +F ++V++L+ K E
Sbjct: 343 PPAEIFFKSVRLLKNKAE 360
[115][TOP]
>UniRef100_C4YIK8 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Candida albicans RepID=C4YIK8_CANAL
Length = 336
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I+ GK A V RK T+ +E +R + V LG ++HFIFN+ESTG++
Sbjct: 254 PPGVIGIDANGK----AYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAM 309
Query: 225 PPEVLFTEAVKILEAKCE 172
PP +F ++V++L+ K E
Sbjct: 310 PPAEIFFKSVRLLKNKAE 327
[116][TOP]
>UniRef100_Q014V0 RNA polymerase subunit (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q014V0_OSTTA
Length = 382
Score = 58.2 bits (139), Expect = 3e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = -1
Query: 375 GKG-KKRATVAQPRKCTLCKECVRD----DDLVDHVDLGSVKNHFIFNIESTGSLPPEVL 211
GKG KK V + R C LC E VR+ + + + KNHFIF IES G + P +
Sbjct: 304 GKGDKKTVKVVETRGCDLCVERVRELTGEPGWDEKIAVRKHKNHFIFTIESVGQMKPGTI 363
Query: 210 FTEAVKILEAKCEAI 166
F EAVKIL +KC+ +
Sbjct: 364 FKEAVKILASKCQNV 378
[117][TOP]
>UniRef100_Q9VMX3 CG3756 n=1 Tax=Drosophila melanogaster RepID=Q9VMX3_DROME
Length = 333
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K
Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322
Query: 177 CEAITD 160
C A+ D
Sbjct: 323 CRALID 328
[118][TOP]
>UniRef100_Q5CPY6 RNA polymerase III C5 subunit n=1 Tax=Cryptosporidium parvum Iowa
II RepID=Q5CPY6_CRYPV
Length = 344
Score = 58.2 bits (139), Expect = 3e-07
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P VFDIED+ A PR CT C+ C+ + + + L K HFIF+IE+TG +
Sbjct: 260 PMKVFDIEDV---TGNAVPTNPRNCTTCRACI--EKFPNKIKLLKDKFHFIFSIETTGCI 314
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PP L A+ IL K E I
Sbjct: 315 PPVELVKTAIDILRKKGEKI 334
[119][TOP]
>UniRef100_Q5CJZ9 DNA-directed RNA polymerase I n=1 Tax=Cryptosporidium hominis
RepID=Q5CJZ9_CRYHO
Length = 344
Score = 58.2 bits (139), Expect = 3e-07
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P VFDIED+ A PR CT C+ C+ + + + L K HFIF+IE+TG +
Sbjct: 260 PMKVFDIEDV---TGNAVPTNPRNCTTCRACI--EKFPNKIKLLKDKFHFIFSIETTGCI 314
Query: 225 PPEVLFTEAVKILEAKCEAI 166
PP L A+ IL K E I
Sbjct: 315 PPVELVKTAIDILRKKGEKI 334
[120][TOP]
>UniRef100_B4Q356 GD23312 n=1 Tax=Drosophila simulans RepID=B4Q356_DROSI
Length = 333
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K
Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322
Query: 177 CEAITD 160
C A+ D
Sbjct: 323 CRALID 328
[121][TOP]
>UniRef100_B4LUA3 GJ24400 n=1 Tax=Drosophila virilis RepID=B4LUA3_DROVI
Length = 333
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R + + R L D V + V++H+IFN+ES G+L PEV+F EAVK+L+ K
Sbjct: 263 AYVKDARYDSCSRNVYRYPHLADAVTMARVRDHYIFNVESVGALKPEVIFLEAVKVLKKK 322
Query: 177 CEAITD 160
C + D
Sbjct: 323 CRSFID 328
[122][TOP]
>UniRef100_B4I197 GM18508 n=1 Tax=Drosophila sechellia RepID=B4I197_DROSE
Length = 331
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K
Sbjct: 261 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 320
Query: 177 CEAITD 160
C A+ D
Sbjct: 321 CRALID 326
[123][TOP]
>UniRef100_B4JB45 GH11517 n=1 Tax=Drosophila grimshawi RepID=B4JB45_DROGR
Length = 333
Score = 57.8 bits (138), Expect = 4e-07
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -1
Query: 402 QNVFDIEDMGKGKKRATVAQPRKCTLCKECV-RDDDLVDHVDLGSVKNHFIFNIESTGSL 226
QN F +G + + + C V R L D V + V++H+IF++ES G+L
Sbjct: 247 QNCFSPGVIGIDENECAYVKDARYDSCSRNVYRYPQLADAVIMARVRDHYIFSVESVGAL 306
Query: 225 PPEVLFTEAVKILEAKCEAITD 160
PEV+F EAVK+L+ KC A D
Sbjct: 307 KPEVIFLEAVKVLKKKCRAFID 328
[124][TOP]
>UniRef100_B0W725 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Culex
quinquefasciatus RepID=B0W725_CULQU
Length = 335
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1
Query: 360 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 181
+A V R + + R L D V + V+NHFIFN+ES G+L P+ +F EA K+L+
Sbjct: 264 QAYVKDARYDSCSRNVYRYPQLADSVTMSRVRNHFIFNVESLGALKPDAIFVEAAKVLKK 323
Query: 180 KCEAITD 160
KC+ D
Sbjct: 324 KCKMFLD 330
[125][TOP]
>UniRef100_C4XY85 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4XY85_CLAL4
Length = 333
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I++ G+ A VA RK T+ +E +R ++ V LG + HFIFN+ESTG++
Sbjct: 251 PSGVIGIDEKGE----AYVADARKDTVSREVLRHEEFSGKVKLGRDREHFIFNVESTGAM 306
Query: 225 PPEVLFTEAVKILEAKCE 172
P +F ++V++L+ K +
Sbjct: 307 SPAEIFLKSVRVLKNKVD 324
[126][TOP]
>UniRef100_UPI0000DB7696 PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Apis mellifera
RepID=UPI0000DB7696
Length = 347
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -1
Query: 363 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 184
+ A V PR + + + +DL + L ++NH IF IES G+L P VLF EA+KIL+
Sbjct: 273 REARVKNPRYDSCSRNVFQHEDLKGCIRLNRIRNHIIFTIESVGTLLPSVLFVEAIKILK 332
Query: 183 AKCEAITD 160
KC+ +
Sbjct: 333 GKCKTFLE 340
[127][TOP]
>UniRef100_B4NW96 GE11271 n=1 Tax=Drosophila yakuba RepID=B4NW96_DROYA
Length = 333
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K
Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322
Query: 177 CEAITD 160
C A D
Sbjct: 323 CRAFID 328
[128][TOP]
>UniRef100_B4KGY1 GI17014 n=1 Tax=Drosophila mojavensis RepID=B4KGY1_DROMO
Length = 333
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R + + R L D V +G V++H+IF++ES G+L PEV+F EAV++L+ K
Sbjct: 263 AYVKDARYDSCSRNVFRYPHLADAVTMGRVRDHYIFSVESVGALKPEVIFLEAVRVLKKK 322
Query: 177 CEAITD 160
C + D
Sbjct: 323 CRSFID 328
[129][TOP]
>UniRef100_B3N4C9 GG25034 n=1 Tax=Drosophila erecta RepID=B3N4C9_DROER
Length = 329
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K
Sbjct: 259 AYVKDARYDTCSRNVYRYPQLNDAVTLSRIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 318
Query: 177 CEAITD 160
C A D
Sbjct: 319 CRAFID 324
[130][TOP]
>UniRef100_A7TDY1 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TDY1_VANPO
Length = 335
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V I D G+ A V RK T+ +E R + V LG V+NHFI N+ESTG++ PE
Sbjct: 255 VIGINDNGE----AYVKDARKDTVSREVFRHPEFEGKVKLGRVRNHFIVNVESTGAMTPE 310
Query: 216 VLFTEAVKILEAKCE 172
+F ++V+IL K E
Sbjct: 311 EIFFKSVRILRNKAE 325
[131][TOP]
>UniRef100_A5DTC9 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5DTC9_LODEL
Length = 336
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I+D G+ A V RK T+ +E +R + V LG +++FIFN+ESTG++
Sbjct: 254 PPGVIGIKDDGE----AYVEDARKDTVSREVLRHPEFEGKVKLGRQRDYFIFNVESTGAM 309
Query: 225 PPEVLFTEAVKILEAKCE 172
PP +F +++++L++K E
Sbjct: 310 PPCEIFLKSIRVLKSKAE 327
[132][TOP]
>UniRef100_UPI000023F302 hypothetical protein FG00365.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F302
Length = 381
Score = 57.0 bits (136), Expect = 6e-07
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
KG+ +A V K T+ +E +R ++ V LG ++HFIF+IESTG + LF E+VK
Sbjct: 304 KGETKAVVVDAMKDTVSREALRHEEFQGKVKLGRRRDHFIFSIESTGQWDSDELFLESVK 363
Query: 192 ILEAKCEAI 166
L+ KC+ +
Sbjct: 364 HLKLKCKKL 372
[133][TOP]
>UniRef100_Q10MU3 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10MU3_ORYSJ
Length = 352
Score = 56.6 bits (135), Expect = 8e-07
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECV 310
P NVFDIED+G G+KRA VA+PR CTLC++CV
Sbjct: 289 PVNVFDIEDLGNGEKRAVVARPRACTLCRQCV 320
[134][TOP]
>UniRef100_C5M6J2 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1
Tax=Candida tropicalis MYA-3404 RepID=C5M6J2_CANTT
Length = 337
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A VA RK T+ +E +R + V LG ++HFIFN+ESTG++ P+ +F ++V+IL+ K
Sbjct: 267 AYVADARKDTVSREVLRHPEFDGKVKLGRQRDHFIFNVESTGAMTPDEIFCKSVRILKNK 326
Query: 177 CE 172
E
Sbjct: 327 AE 328
[135][TOP]
>UniRef100_Q4QDF5 DNA-directed RNA polymerase, alpha subunit, putative n=1
Tax=Leishmania major RepID=Q4QDF5_LEIMA
Length = 442
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDD--------LVDHVDLGSVKNHFIF 250
P VF E +G ATV P KCTLC+EC+R +D D V + K H +F
Sbjct: 335 PAGVFGYEGGQRGAA-ATVVAPEKCTLCRECLRSEDKGAEAAANKGDRVRVQKDKTHVLF 393
Query: 249 NIESTGSLPPEVLFTEAVKILEAKCEAITD 160
+IES G L P + +++ +C A+ +
Sbjct: 394 HIESVGQLHPAQILRFGLRLFAERCRALAE 423
[136][TOP]
>UniRef100_B4N0H9 GK24584 n=1 Tax=Drosophila willistoni RepID=B4N0H9_DROWI
Length = 332
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = -1
Query: 363 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 184
+ A V R + + R L D V L V++H+IF +ES G+L PEV+F EAVK+L+
Sbjct: 260 ENAYVKDARYDSGSRNVYRYSHLADAVTLARVRDHYIFTVESVGALKPEVIFIEAVKVLK 319
Query: 183 AKCEAITD 160
KC + D
Sbjct: 320 KKCRSFID 327
[137][TOP]
>UniRef100_A8P6Y5 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein
n=1 Tax=Brugia malayi RepID=A8P6Y5_BRUMA
Length = 339
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R T + +R +DL ++++L +K+HFIF++ESTG+L L EA K++E K
Sbjct: 264 AFVKDARSDTCSRNILRYEDLAEYIELSRIKDHFIFSVESTGALRSAELVVEACKVMEEK 323
Query: 177 CEAI 166
C +
Sbjct: 324 CRTL 327
[138][TOP]
>UniRef100_Q7RN53 DNA-directed RNA polymerases i and iii 40 kDa polypeptide n=1
Tax=Plasmodium yoelii yoelii RepID=Q7RN53_PLAYO
Length = 286
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+NVFDIE+ G P C+ C+ C+ + + KNHFIF +ESTG
Sbjct: 204 PKNVFDIEESGN----LVAKNPLDCSSCRACI--EKYPQKITFQKTKNHFIFTVESTGCF 257
Query: 225 PPEVLFTEAVKILEAK 178
P +F +A+ IL+ K
Sbjct: 258 PSADIFKKALNILKVK 273
[139][TOP]
>UniRef100_A9BKT2 Rpa5 n=1 Tax=Cryptophyta RepID=A9BKT2_9CRYP
Length = 335
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -1
Query: 405 PQNVFDIEDMGK-GKKRATVAQPRKCTLCKECVRDDD-LVDHVDLGSVKNHFIFNIESTG 232
P VFD+E+ KR V+ P CT+CKEC+ +V + +G F IE+TG
Sbjct: 241 PMKVFDLEEFSLFSLKRLFVSSPNYCTMCKECIDFPKYVVPKIRIGRNNQKITFIIETTG 300
Query: 231 SLPPEVLFTEAVKILEAKC 175
PE+LF A+ +L KC
Sbjct: 301 IFSPEILFHRAIFLLVGKC 319
[140][TOP]
>UniRef100_UPI000180C3EB PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Ciona intestinalis
RepID=UPI000180C3EB
Length = 345
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 396 VFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPE 217
V ++ G + A V RK T +E +R L D V+L V++HFI++IES+ ++ P
Sbjct: 255 VIEVYRNKNGDQEARVVDARKDTCSREVLRHPHLKDRVELSKVRDHFIYSIESSVAITPN 314
Query: 216 VLFTEAVKILEAKCEAI 166
L A+KI+ KC +
Sbjct: 315 ELMCRAIKIMMGKCRTL 331
[141][TOP]
>UniRef100_B3MVL4 GF21532 n=1 Tax=Drosophila ananassae RepID=B3MVL4_DROAN
Length = 333
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = -1
Query: 357 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 178
A V R + + R + D V L V++H+IF +ES G+L PEV+F EAVK+L+ K
Sbjct: 263 AYVKDARYDSCSRNVYRYPQINDSVTLARVRDHYIFTVESVGALKPEVIFLEAVKVLKKK 322
Query: 177 CEAITD 160
C + D
Sbjct: 323 CRSFID 328
[142][TOP]
>UniRef100_Q6C4T2 YALI0E23947p n=1 Tax=Yarrowia lipolytica RepID=Q6C4T2_YARLI
Length = 339
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P+ V ++E + VA RK T+ +E +R ++ V LG ++HFIFN+ES+G+L
Sbjct: 255 PKGVIELEG-----GKPVVADARKDTVSREVLRHEEFNGKVKLGRRRDHFIFNVESSGAL 309
Query: 225 PPEVLFTEAVKILEAKCEAI 166
P+ +F ++V L+AK + +
Sbjct: 310 EPDEIFLKSVMELQAKAQTL 329
[143][TOP]
>UniRef100_B2A971 Predicted CDS Pa_1_8610 n=1 Tax=Podospora anserina
RepID=B2A971_PODAN
Length = 372
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/69 (36%), Positives = 44/69 (63%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V P+ T+ +E +R ++ D V LG ++HFI+ +ESTG + +F E+V
Sbjct: 295 EGELKAVVVDPKSDTVSREALRHEEFKDKVKLGRRRDHFIYLVESTGQWKSDAIFLESVS 354
Query: 192 ILEAKCEAI 166
L+AK +A+
Sbjct: 355 HLKAKAKAL 363
[144][TOP]
>UniRef100_C7YHM9 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHM9_NECH7
Length = 381
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
+G+ +A V K T+ +E +R ++ V LG ++HFIF+IESTG + LF E+VK
Sbjct: 304 EGETKAVVVDAMKDTVSREVLRHEEFEGKVKLGRRRDHFIFSIESTGQWDSDELFLESVK 363
Query: 192 ILEAKCEAI 166
L+ KC+ +
Sbjct: 364 HLKLKCKKL 372
[145][TOP]
>UniRef100_UPI0001AE7263 UPI0001AE7263 related cluster n=1 Tax=Homo sapiens
RepID=UPI0001AE7263
Length = 242
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1
Query: 312 VRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAITD 160
+R++ L V L V++H+IF++ESTG LPP+VL +EA+K+L KC D
Sbjct: 184 MRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 234
[146][TOP]
>UniRef100_Q5JTE0 Polymerase (RNA) I polypeptide C, 30kDa (Fragment) n=2 Tax=Homo
sapiens RepID=Q5JTE0_HUMAN
Length = 200
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1
Query: 312 VRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAITD 160
+R++ L V L V++H+IF++ESTG LPP+VL +EA+K+L KC D
Sbjct: 142 MRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 192
[147][TOP]
>UniRef100_A0D420 Chromosome undetermined scaffold_37, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0D420_PARTE
Length = 316
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRD-DDLVDHVDLGSVKNHFIFNIESTGS 229
P VF ++ + V PR CT C+ECVR+ + V+L + NHFIF+IES G
Sbjct: 238 PMKVFGVKG-----NQIKVVNPRNCTTCRECVREANGFEKDVELNKIDNHFIFSIESVGQ 292
Query: 228 LPPEVLFTEAVKILEAKCE 172
+ + +A+++ +K +
Sbjct: 293 YEAKDIMLQAIEVFRSKVQ 311
[148][TOP]
>UniRef100_A4R0T4 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4R0T4_MAGGR
Length = 373
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = -1
Query: 372 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 193
KG+ +A V P + T+ +EC+R + V LG ++HFIF+IES G + LF ++
Sbjct: 296 KGEMKAVVNDPMRDTVSRECLRHAEFEGKVKLGRRRDHFIFSIESAGQWDSDELFLASIA 355
Query: 192 ILEAKCEAITD 160
L++KC+ + +
Sbjct: 356 ELKSKCKKLEE 366
[149][TOP]
>UniRef100_A0D2I2 Chromosome undetermined scaffold_35, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0D2I2_PARTE
Length = 316
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRD-DDLVDHVDLGSVKNHFIFNIESTGS 229
P VF I+ + V PR CT C+ECVR+ + V+L + NHFIF+IES G
Sbjct: 238 PMKVFGIKG-----NQIKVVNPRNCTTCRECVREANGFEKDVELNKIDNHFIFSIESVGQ 292
Query: 228 LPPEVLFTEAVKILEAKCE 172
+ + +A+ + +K +
Sbjct: 293 YEAKDIMLQAIDVFRSKVQ 311
[150][TOP]
>UniRef100_A3GGP5 RNA polymerase III (C) subunit n=1 Tax=Pichia stipitis
RepID=A3GGP5_PICST
Length = 336
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = -1
Query: 405 PQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSL 226
P V I G+ A V RK T+ +E +R ++ V LG ++HFIFN+ESTG++
Sbjct: 254 PSGVIGINADGE----AYVKDARKDTVSREVLRHEEFDGKVKLGRKRDHFIFNVESTGAM 309
Query: 225 PPEVLFTEAVKILEAKCE 172
PE +F +++ +L+ K E
Sbjct: 310 APEEIFFKSLLVLKNKVE 327
[151][TOP]
>UniRef100_UPI00005A26F8 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa
polypeptide (RPA40) (RPA39) isoform 6 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A26F8
Length = 328
Score = 53.1 bits (126), Expect = 9e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -1
Query: 309 RDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAITD 160
R + L V L V++H+IF++ESTG LPP+VL +EA+K+L KC D
Sbjct: 271 RKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 320