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[1][TOP]
>UniRef100_UPI00005DC1C1 NRPA2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC1C1
Length = 1178
Score = 328 bits (842), Expect = 1e-88
Identities = 161/164 (98%), Positives = 163/164 (99%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++ RCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN
Sbjct: 197 VVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 256
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES
Sbjct: 257 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 316
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP
Sbjct: 317 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 360
[2][TOP]
>UniRef100_Q9FXG4 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FXG4_ARATH
Length = 1233
Score = 328 bits (842), Expect = 1e-88
Identities = 161/164 (98%), Positives = 163/164 (99%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++ RCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN
Sbjct: 229 VVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 288
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES
Sbjct: 289 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 348
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP
Sbjct: 349 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 392
[3][TOP]
>UniRef100_Q9C8S4 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9C8S4_ARATH
Length = 1114
Score = 308 bits (788), Expect = 2e-82
Identities = 153/164 (93%), Positives = 155/164 (94%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++ RCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN
Sbjct: 147 VVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 206
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDG
Sbjct: 207 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDG----- 261
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP
Sbjct: 262 ---VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 302
[4][TOP]
>UniRef100_A7QMB8 Chromosome undetermined scaffold_125, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QMB8_VITVI
Length = 320
Score = 258 bits (660), Expect = 2e-67
Identities = 121/164 (73%), Positives = 147/164 (89%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++RCVR+DQS+VTVKLYYLRNGSAR+GFWI GREYLLPVG+VLKAL ++ D EIYESL
Sbjct: 113 VVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLT 172
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYSE Y G GA+GTQLV ER KIILDEVRDL LFTR QC +H+G+HFQ V+DG++ ES
Sbjct: 173 CCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENES 232
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
SIVA+AVLR+Y+FVHLDN++DKFNLLIF++QKL+SL+DQTS+P
Sbjct: 233 YSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVP 276
[5][TOP]
>UniRef100_A5C2Y6 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C2Y6_VITVI
Length = 416
Score = 243 bits (620), Expect = 7e-63
Identities = 119/180 (66%), Positives = 145/180 (80%), Gaps = 16/180 (8%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++RCVR+DQS+VTVKLYYLRNGSAR+GFWI GREYLLPVG+VLKAL ++ D EIYESL
Sbjct: 193 VVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLT 252
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYSE Y G GA+GTQLV ER KIILDEVRDL LFTR QC +H+G+HFQ V+DG++ ES
Sbjct: 253 CCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENES 312
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFI----------------IQKLYSLVDQTSLP 546
SIVA+AVLR+Y+FVHLDN++DKFNLL+ + I KL+SL+DQTS+P
Sbjct: 313 YSIVADAVLREYIFVHLDNNYDKFNLLMLVIVSFKFLSYPYLIVATIVKLFSLIDQTSVP 372
[6][TOP]
>UniRef100_Q8H8K0 Putative RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q8H8K0_ORYSJ
Length = 264
Score = 239 bits (609), Expect = 1e-61
Identities = 109/164 (66%), Positives = 140/164 (85%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+RCV+DDQSSVT+KLYYL NGSAR+GFW+ GRE+LLPVG+VLKAL ++ D EI+ SL
Sbjct: 45 VIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLT 104
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYS+HY RG G + TQL+ ERA+IILDEVRDL LFTR +C HLG++F+ V++G +K+
Sbjct: 105 CCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDD 164
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
VAEAVL+DY+FVHL N+HDKFNLLIF++QKLY++VDQT+ P
Sbjct: 165 FETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASP 208
[7][TOP]
>UniRef100_B9G6G0 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group
RepID=B9G6G0_ORYSJ
Length = 1150
Score = 239 bits (609), Expect = 1e-61
Identities = 109/164 (66%), Positives = 140/164 (85%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+RCV+DDQSSVT+KLYYL NGSAR+GFW+ GRE+LLPVG+VLKAL ++ D EI+ SL
Sbjct: 151 VIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLT 210
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYS+HY RG G + TQL+ ERA+IILDEVRDL LFTR +C HLG++F+ V++G +K+
Sbjct: 211 CCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDD 270
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
VAEAVL+DY+FVHL N+HDKFNLLIF++QKLY++VDQT+ P
Sbjct: 271 FETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASP 314
[8][TOP]
>UniRef100_B8BHP0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BHP0_ORYSI
Length = 1086
Score = 239 bits (609), Expect = 1e-61
Identities = 109/164 (66%), Positives = 140/164 (85%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+RCV+DDQSSVT+KLYYL NGSAR+GFW+ GRE+LLPVG+VLKAL ++ D EI+ SL
Sbjct: 118 VIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLT 177
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYS+HY RG G + TQL+ ERA+IILDEVRDL LFTR +C HLG++F+ V++G +K+
Sbjct: 178 CCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDD 237
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
VAEAVL+DY+FVHL N+HDKFNLLIF++QKLY++VDQT+ P
Sbjct: 238 FETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASP 281
[9][TOP]
>UniRef100_B9SVH7 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SVH7_RICCO
Length = 1159
Score = 237 bits (604), Expect = 5e-61
Identities = 113/169 (66%), Positives = 141/169 (83%), Gaps = 6/169 (3%)
Frame = +1
Query: 55 LILRCVRD------DQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEE 216
+++RCVR+ DQSSV+VKLYYLR+GSAR+GFWI GREYLLP G+VLKAL + D E
Sbjct: 171 VVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDRE 230
Query: 217 IYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLD 396
IYE L CCY E Y + GA+G+QLV ERAKIILDEVRDL LFT+ +C +H+G+HFQPV+D
Sbjct: 231 IYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVMD 290
Query: 397 GVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSL 543
G++KE+ S VA AVL+DY+FVHL+N DKFNLLIF++QKL+SLVDQTS+
Sbjct: 291 GLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSV 339
[10][TOP]
>UniRef100_B9GLY1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9GLY1_POPTR
Length = 1109
Score = 192 bits (488), Expect = 1e-47
Identities = 102/171 (59%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Frame = +1
Query: 55 LILRCVRD------DQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEE 216
+++RCVR+ D SSVTV+LYYLRNGSARVGFW+ GREYLLPVG+VLKAL + D E
Sbjct: 141 VVIRCVREYQSSLTDHSSVTVRLYYLRNGSARVGFWVRGREYLLPVGIVLKALVETTDRE 200
Query: 217 IYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLD 396
IYE+L Y E Y GA+G+QL+ ERAKIILDEVR LFT++ C +H+G H
Sbjct: 201 IYENLTSYYDEKYEEVKGAVGSQLLGERAKIILDEVRVAALFTQDDCLQHIGTH------ 254
Query: 397 GVKKESLSI-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
S+SI VA AVL+DY+FVHL N HDKF+LLIF++QKL+S VD TS P
Sbjct: 255 --NCISISITVAHAVLKDYVFVHLPNFHDKFSLLIFMLQKLFSFVDHTSAP 303
[11][TOP]
>UniRef100_UPI0000DD9A19 Os10g0495600 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD9A19
Length = 1127
Score = 186 bits (472), Expect = 1e-45
Identities = 93/164 (56%), Positives = 116/164 (70%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+RCV+DDQSSVT+KLYYL NGSAR+GFW+ GRE+LLPVG+VLKAL ++ D EI+ SL
Sbjct: 179 VIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLT 238
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
CCYS+HY RG G + TQL+ ERA+IILDEV
Sbjct: 239 CCYSDHYERGKGVVSTQLIGERAQIILDEV------------------------------ 268
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
AEAVL+DY+FVHL N+HDKFNLLIF++QKLY++VDQT+ P
Sbjct: 269 ----AEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASP 308
[12][TOP]
>UniRef100_A9T5Q2 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T5Q2_PHYPA
Length = 1199
Score = 147 bits (372), Expect = 4e-34
Identities = 82/166 (49%), Positives = 111/166 (66%), Gaps = 2/166 (1%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I RCVR DQS+VT+++YY+ GSA +GF + +E+L+PVG++LKAL S + EIYE L
Sbjct: 220 MISRCVRPDQSAVTMRMYYMNYGSASLGFSVRRQEFLIPVGIILKALIESNEYEIYEQLM 279
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
S+ GA+G+Q V +RAKIIL+EVR L LFTR C + LG G+
Sbjct: 280 SIQSDSKAM-KGALGSQFVSQRAKIILEEVRQLSLFTRHDCLQFLG--------GLTCYF 330
Query: 415 LSI--VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
L + V E VL DY+ VHLDN DKFNLL+F++QKL++LVD + P
Sbjct: 331 LLVKSVGEQVLNDYILVHLDNPLDKFNLLVFMLQKLFALVDGMAAP 376
[13][TOP]
>UniRef100_C1MLF5 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MLF5_9CHLO
Length = 1198
Score = 103 bits (257), Expect = 8e-21
Identities = 62/160 (38%), Positives = 93/160 (58%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F +RCV D+ S TV+L+YL GSAR+ F +EY LP+GLV AL D+E+ +
Sbjct: 228 FATAIRCVSPDEHSCTVRLHYLTGGSARLAFIHRRQEYFLPLGLVFIALCEVSDKELQDV 287
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ C G GA ER ++L+E+ LG+ TR Q +LG F+ L+
Sbjct: 288 V--CSGVP---GPGA--HVFASERVAMVLEEIHTLGIQTRSQALSYLGICFRERLNADSW 340
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
E+ + + ++RD++F+HL DKFNLL+ ++QKLY+LV
Sbjct: 341 ETNIDIGKRIIRDHVFIHLATCSDKFNLLVLMLQKLYALV 380
[14][TOP]
>UniRef100_C1FDM4 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FDM4_9CHLO
Length = 1192
Score = 100 bits (248), Expect = 9e-20
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RC +D+ + TV+++Y +GSAR+ F +EY +P G++L+AL D + +
Sbjct: 209 IRCSANDEHTSTVRIHYTSDGSARLVFVHRRKEYFVPAGIILRALAEFSDSVVQAIV--- 265
Query: 241 YSEHYGRGDGAIGTQLVR-ERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
RG +G Q+ ER +IIL E G+ + Q +LG+HF+ LD E+
Sbjct: 266 -----ARGLTGLGAQVFAIERIRIILGEAATFGIHNKVQALAYLGEHFRAQLDANPWETN 320
Query: 418 SIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
V + ++ +++F+HL +D DKFNL++ ++QKLY+LV
Sbjct: 321 FDVGKRLICEHIFIHLQSDEDKFNLVLLMMQKLYALV 357
[15][TOP]
>UniRef100_A8NYQ6 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NYQ6_COPC7
Length = 1127
Score = 98.6 bits (244), Expect = 3e-19
Identities = 53/156 (33%), Positives = 94/156 (60%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCVR DQ+SVT L+YL NGSA F +EY++P+ L+LKAL N+ D+EI+E +
Sbjct: 199 IRCVRPDQTSVTNTLHYLANGSAMFRFTWRKQEYVIPIMLILKALVNASDKEIFEGV--- 255
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
+ Y + +R +++L + + T EQC ++LG F+ VL+ + + +
Sbjct: 256 VMQDY-------DNTFLTDRVELLLRSFKMYTMHTGEQCLEYLGDKFRVVLNLPEDWTNA 308
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ +++ + VHL+ DKF +L+++++K+YSL+
Sbjct: 309 AIGAWLIQKLVLVHLETPRDKFRMLLYMLRKMYSLI 344
[16][TOP]
>UniRef100_B0CXK3 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CXK3_LACBS
Length = 1179
Score = 98.2 bits (243), Expect = 3e-19
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCVR DQ+SVT L+YL NGSA + F +EY++P+ LVLKAL + D+EI+E +
Sbjct: 229 MRCVRPDQTSVTNTLHYLSNGSAMLRFSWRKQEYVIPIMLVLKALVGASDKEIFEGVIMQ 288
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
E+ + +R +++L + + T EQC ++LG F+ VL+ + + +
Sbjct: 289 DYEN----------TFLTDRVELLLRSFKMFTMQTGEQCLEYLGDKFRVVLNLPEDWTNA 338
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+LR + VHL+ +KF +L+F+++KLYSLV
Sbjct: 339 AQGAWLLRKMILVHLETPREKFRMLLFMLRKLYSLV 374
[17][TOP]
>UniRef100_Q01EE5 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01EE5_OSTTA
Length = 1128
Score = 97.4 bits (241), Expect = 6e-19
Identities = 55/147 (37%), Positives = 85/147 (57%)
Frame = +1
Query: 88 SVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCCYSEHYGRGD 267
S T++L+Y+RNGS +V F E+ +P GLVL++L D E++E C G
Sbjct: 211 SSTIRLHYMRNGSLKVAFQHRREEFFIPAGLVLRSLVACSDAELHE--RACMEL---LGT 265
Query: 268 GAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLSIVAEAVLRD 447
+ V+ER II +E + L +FT+ +LGQHF+ +L+ ES + V E LRD
Sbjct: 266 SSHEETFVKERLAIIQEECQSLYIFTQISALSYLGQHFRTLLEASASESDAAVGERFLRD 325
Query: 448 YLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+F+HL + DK +LL+ ++ KL +LV
Sbjct: 326 TIFIHLSRNGDKLSLLLLMMNKLLTLV 352
[18][TOP]
>UniRef100_A4RSZ5 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RSZ5_OSTLU
Length = 1145
Score = 97.1 bits (240), Expect = 8e-19
Identities = 54/167 (32%), Positives = 92/167 (55%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+S F ++RCV +D+ S V+L+Y+R G+ R+ +E+ +P G+VL+AL
Sbjct: 205 RSPLFSEFATVIRCVTEDEHSSIVRLHYMRTGALRLALQHRRQEFFIPAGIVLRALAVCS 264
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D E+Y + C + G + + +R ++ E +L + T+ +LGQHF+
Sbjct: 265 DAEMYRQV-CLHLRSAGTDE-----TFIEDRLALLQRECHELQIRTQMCALSYLGQHFRT 318
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+LD ES V E L D+++VHL ++ DK +LLI ++ KL S+V
Sbjct: 319 LLDLSSDESDISVGERFLEDFIYVHLQHNGDKLSLLILMLSKLLSIV 365
[19][TOP]
>UniRef100_Q9P7X8 Probable DNA-directed RNA polymerase I subunit RPA2 n=2
Tax=Schizosaccharomyces pombe RepID=RPA2_SCHPO
Length = 1174
Score = 96.7 bits (239), Expect = 1e-18
Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + L +RCVR DQSS+T L+YL NG F EYL+P ++LKAL +
Sbjct: 204 RGTSYSQYGLSIRCVRPDQSSLTNTLHYLNNGVTMFRFHWRKNEYLIPSMMILKALLETS 263
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D+EI+E + G+ +G + +R +++L + GL+++ + ++LG F+
Sbjct: 264 DKEIFEGI-------VGKD---LGNTFLTDRVELMLRAYKSYGLYSQTETLQYLGSKFRV 313
Query: 388 VLDGVKKESLSI-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
VL GV ++ + V +L+ + VHL DKF LL+F+I+KLY+LV
Sbjct: 314 VL-GVAEDLTDVEVGRFLLQKVVLVHLREAKDKFRLLLFMIRKLYALV 360
[20][TOP]
>UniRef100_Q5KEV8 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KEV8_CRYNE
Length = 1193
Score = 94.7 bits (234), Expect = 4e-18
Identities = 56/162 (34%), Positives = 89/162 (54%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCVR D+++ T ++YL NG A + F EY++P+ L+LKAL ++ D+EI+E L
Sbjct: 243 IRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILKALVDASDKEIFEGLI-- 300
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G + +R +++L + GL T QC +LG+ F+ VL+ S
Sbjct: 301 --------QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYLGEKFRVVLNVPDDWSNV 352
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
V +LR + VHL DKF +L+F+++KLYS V + P
Sbjct: 353 QVGGYLLRKVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCP 394
[21][TOP]
>UniRef100_Q4PFI0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PFI0_USTMA
Length = 1289
Score = 94.4 bits (233), Expect = 5e-18
Identities = 55/159 (34%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
Frame = +1
Query: 55 LILRCV-RDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESL 231
+++RC+ +DD SVT ++YL NG + F +EY++PV +VLKAL ++ D+EI+ S+
Sbjct: 283 IVIRCLHKDDLISVTNAVHYLHNGGLTMRFSWRKQEYMVPVVMVLKALVDATDKEIFASI 342
Query: 232 NCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKE 411
G + +R +++L + L++ QC ++LG F+ VL +
Sbjct: 343 V----------QGDFENTFLTDRVELLLRNFKQYSLWSGHQCLEYLGSKFRVVLGCPEDY 392
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ + V ++ L VHLD+ DK+ +LIF+IQKLYSLV
Sbjct: 393 TDAQVGTELISRILLVHLDSPRDKYKMLIFMIQKLYSLV 431
[22][TOP]
>UniRef100_Q1E8J1 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E8J1_COCIM
Length = 1243
Score = 94.0 bits (232), Expect = 7e-18
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL +
Sbjct: 225 RGASYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALIETN 284
Query: 208 DEEIYESLNCCYSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 384
D EI+E L GR G I V +R +++L + G+ ++ +CR +LG+ F+
Sbjct: 285 DREIFERL-------VGREGSLGINNTFVTDRMELLLRTYKAYGVHSKSKCRAYLGEKFR 337
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
VL S V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 338 YVLGMADNVSDEDVGTEFLRKIVLPHLGNQNVTEPQDNDKFNMILFMIRKLYTLV 392
[23][TOP]
>UniRef100_C5PH78 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PH78_COCP7
Length = 1243
Score = 94.0 bits (232), Expect = 7e-18
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL +
Sbjct: 225 RGASYTKFGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALIETN 284
Query: 208 DEEIYESLNCCYSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 384
D EI+E L GR G I V +R +++L + G+ ++ +CR +LG+ F+
Sbjct: 285 DREIFERL-------VGREGSLGINNTFVTDRMELLLRTYKAYGVHSKSKCRAYLGEKFR 337
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
VL S V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 338 YVLGMADNVSDEDVGTEFLRKIVLPHLGNQNVTEPQDNDKFNMILFMIRKLYTLV 392
[24][TOP]
>UniRef100_C5G0Y5 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5G0Y5_NANOT
Length = 1243
Score = 93.6 bits (231), Expect = 9e-18
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ S+ F + +R VR DQ+S T L+YL +G+ + F EYL+PV +VLKAL +
Sbjct: 225 RGSAYTKFGIQIRSVRPDQTSQTNVLHYLSDGNVTLRFSWRKNEYLVPVMMVLKALIETN 284
Query: 208 DEEIYESLNCCYSEHYGRGDG-AIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 384
D EI+E L GR D I V +R +++L + G+ +R +CR +LG F+
Sbjct: 285 DREIFERL-------VGREDSLGIENTFVTDRVELLLRTYKAYGVHSRSKCRAYLGSKFR 337
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
VL + V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 338 FVLGMPEDVPDEDVGTEFLRKIVLPHLGNQNVTESQDNDKFNMILFMIRKLYTLV 392
[25][TOP]
>UniRef100_B6K4L6 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K4L6_SCHJY
Length = 1170
Score = 92.8 bits (229), Expect = 1e-17
Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCVR DQSS+T L+YL NG A F EYL+P ++LKAL + D+EI+E +
Sbjct: 215 IRCVRPDQSSLTNTLHYLSNGVAMFRFHWRKNEYLIPSMMILKALIETSDKEIFEGIVGQ 274
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
+E+ + +R +++L + GL T+ Q ++LG F+ VL G+ ++
Sbjct: 275 ETEN----------TFLTDRVELMLRAYKSYGLSTQTQSLQYLGSKFRVVL-GLAEDLTD 323
Query: 421 I-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ V +LR + V+L ++ DKF +L+F+I+KLY+LV
Sbjct: 324 VEVGRTLLRRVVLVNLPDNRDKFRMLLFMIRKLYALV 360
[26][TOP]
>UniRef100_C4JFY6 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JFY6_UNCRE
Length = 1243
Score = 92.4 bits (228), Expect = 2e-17
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 236 IRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALIETNDREIFERL--- 292
Query: 241 YSEHYGRGDGAIGTQ--LVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
GR +G++G + V +R +++L + G+ +R +CR +LG+ F+ VL +
Sbjct: 293 ----VGR-EGSLGMKNTFVTDRMELLLRTYKAYGVHSRSKCRAYLGEKFRYVLGMSENVP 347
Query: 415 LSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D+DKFN+++FII+KLY+LV
Sbjct: 348 DEDVGTEFLRKIVLPHLGNQNVTESQDNDKFNMILFIIRKLYTLV 392
[27][TOP]
>UniRef100_C6HDP1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HDP1_AJECH
Length = 1242
Score = 92.0 bits (227), Expect = 2e-17
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 236 IRSVRTDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALVETNDREIFERL--- 292
Query: 241 YSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
GR G I V +R +++L + L+ R+ R +LG+ F+PVL
Sbjct: 293 ----VGREGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDTRAYLGEKFRPVLGMPADIPD 348
Query: 418 SIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
+V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 349 DMVGAEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKLYTLV 392
[28][TOP]
>UniRef100_B8N4K6 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8N4K6_ASPFN
Length = 1237
Score = 92.0 bits (227), Expect = 2e-17
Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E
Sbjct: 233 FGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVMMILKALVETNDREIFEG 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L S I V +R +++L + L +R CR +LG+ F+PVL
Sbjct: 293 LVGSASSE------GINNTFVTDRVELLLRTYKGYNLHSRSACRAYLGEKFKPVLGVPMD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S LR + HL N D+DKF L++F+I+KLY+LV
Sbjct: 347 MSNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKLIMFMIRKLYALV 393
[29][TOP]
>UniRef100_UPI000151A7C9 conserved hypothetical protein n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A7C9
Length = 1166
Score = 91.7 bits (226), Expect = 3e-17
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +RCVR DQ+S T L+YL +G+ F EYL+PV +++KAL +
Sbjct: 204 RGASYTKFGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMIMKALVETS 263
Query: 208 DEEIYESLNCCYSEHYGRGDGAIG----TQLVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G + +R +++L + L+++++ +LG
Sbjct: 264 DREIF--------------DGIVGADTSNSFLTDRLELLLRSYKKYNLYSKQETLAYLGD 309
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL++ DKF +L+F+I+KLY+LV
Sbjct: 310 KFRVVFGATPDVSDIEVGQEVLKRIVLVHLEDPKDKFRMLLFMIRKLYTLV 360
[30][TOP]
>UniRef100_Q0CKF7 DNA-directed RNA polymerase I polypeptide 2 n=1 Tax=Aspergillus
terreus NIH2624 RepID=Q0CKF7_ASPTN
Length = 1205
Score = 91.7 bits (226), Expect = 3e-17
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 237 IRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMILKALVETNDREIFEGLVGN 296
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
S I V +R +++L + + TR CR +LG+ F+PVL S
Sbjct: 297 ASSE------GINNTFVTDRVELLLRTYKGYNVHTRSSCRAYLGEKFKPVLGVPSDMSNE 350
Query: 421 IVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
LR + HL N D+DKF +++F+I+KLY+LV
Sbjct: 351 DAGTEFLRKVVLPHLGNQNVTETQDYDKFKMIMFMIRKLYALV 393
[31][TOP]
>UniRef100_C5GTC3 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GTC3_AJEDR
Length = 1243
Score = 91.7 bits (226), Expect = 3e-17
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F E+L+PV ++LKAL + D +I+E L
Sbjct: 236 IRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVAMILKALVETNDRDIFERL--- 292
Query: 241 YSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
GR G I V +R +++L + GL R+ R +LG+ F+PVL
Sbjct: 293 ----VGREGSKGIQNSFVTDRVELLLRTYKGYGLHGRDDTRAYLGEKFRPVLGMPADMPD 348
Query: 418 SIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 349 EAVGTEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKLYTLV 392
[32][TOP]
>UniRef100_A6RAC1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6RAC1_AJECN
Length = 1214
Score = 91.7 bits (226), Expect = 3e-17
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 236 IRSVRADQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALVETNDREIFERL--- 292
Query: 241 YSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
GR G I V +R +++L + L+ R+ R +LG+ F+PVL
Sbjct: 293 ----VGREGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDTRAYLGEKFRPVLGMPADIPD 348
Query: 418 SIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
+V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 349 DMVGAEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKLYTLV 392
[33][TOP]
>UniRef100_A5DAV4 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DAV4_PICGU
Length = 1166
Score = 91.7 bits (226), Expect = 3e-17
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +RCVR DQ+S T L+YL +G+ F EYL+PV +++KAL +
Sbjct: 204 RGASYTKFGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMIMKALVETS 263
Query: 208 DEEIYESLNCCYSEHYGRGDGAIG----TQLVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G + +R +++L + L+++++ +LG
Sbjct: 264 DREIF--------------DGIVGADTSNSFLTDRLELLLRSYKKYNLYSKQETLAYLGD 309
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL++ DKF +L+F+I+KLY+LV
Sbjct: 310 KFRVVFGATPDVSDIEVGQEVLKRIVLVHLEDPKDKFRMLLFMIRKLYTLV 360
[34][TOP]
>UniRef100_Q6BKD3 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=Q6BKD3_DEBHA
Length = 1167
Score = 91.3 bits (225), Expect = 4e-17
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +RCVR DQ+S T L+YL +G+ F EYL+P ++LKAL +
Sbjct: 204 RGASYTKFGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWKKNEYLVPAMMILKALIETN 263
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG IG + +R +++L + L+++++ +LG
Sbjct: 264 DREIF--------------DGIIGADTSNSFLTDRLELLLRTYKQYNLYSKQETLAYLGD 309
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL N+ DKF +L+F+I+KLYSLV
Sbjct: 310 KFRIVFGSAPDVSDIEVGKEVLQRIVLVHLPNNLDKFRMLLFMIRKLYSLV 360
[35][TOP]
>UniRef100_Q4WMY3 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus
RepID=Q4WMY3_ASPFU
Length = 1235
Score = 91.3 bits (225), Expect = 4e-17
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV +++KAL + D EI+E
Sbjct: 233 FGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMIMKALVETNDREIFEG 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ +G + V +R +++L + L TR CR +LG+ F+PVL
Sbjct: 293 I---VGSATSKG---VNNTFVTDRVELLLRTYKAYNLHTRSSCRAYLGEKFKPVLGVPAD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S LR + HL N D+DKF L++F+I+KLY+LV
Sbjct: 347 MSNEDAGTEFLRKIVLPHLGNQNVTEIQDYDKFKLIMFMIRKLYALV 393
[36][TOP]
>UniRef100_C0NSE6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NSE6_AJECG
Length = 1242
Score = 91.3 bits (225), Expect = 4e-17
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 236 IRSVRIDQTSQTNVLHYLSDGNVTFRFSWRKNEYLVPVVMILKALVETNDREIFERL--- 292
Query: 241 YSEHYGR-GDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
GR G I V +R +++L + L+ R+ R +LG+ F+PVL
Sbjct: 293 ----VGREGSEGIKNSFVTDRVELLLRTYKGYKLYGRDDTRAYLGEKFRPVLGMPADIPD 348
Query: 418 SIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
+V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 349 DMVGAEFLRKVVLPHLGNQNVTESQDNDKFNMILFMIRKLYTLV 392
[37][TOP]
>UniRef100_B0Y7L8 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus A1163
RepID=B0Y7L8_ASPFC
Length = 1235
Score = 91.3 bits (225), Expect = 4e-17
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV +++KAL + D EI+E
Sbjct: 233 FGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMIMKALVETNDREIFEG 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ +G + V +R +++L + L TR CR +LG+ F+PVL
Sbjct: 293 I---VGSATSKG---VNNTFVTDRVELLLRTYKAYNLHTRSSCRAYLGEKFKPVLGVPAD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S LR + HL N D+DKF L++F+I+KLY+LV
Sbjct: 347 MSNEDAGTEFLRKIVLPHLGNQNVTEIQDYDKFKLIMFMIRKLYALV 393
[38][TOP]
>UniRef100_C4QY42 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QY42_PICPG
Length = 1165
Score = 90.9 bits (224), Expect = 6e-17
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ S F + +R VR DQ+S T L+YL++G+ F EYL+PV ++LKAL +
Sbjct: 204 RGDSYTQFGIQIRAVRPDQTSQTNVLHYLKDGNVTFRFSWRKNEYLVPVPMILKALVETN 263
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G++ + +R +++L + L ++++ +LG
Sbjct: 264 DREIF--------------DGIVGSETSNSFLTDRLELLLRNYKHYKLVSKQETLAYLGD 309
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
F+ V + S V + VLR + VHL ++ DKF LL+F+I+KLY+LV P
Sbjct: 310 KFRVVFNATPDVSDVDVGKEVLRRIVLVHLPDNRDKFRLLLFMIRKLYALVSGDCCP 366
[39][TOP]
>UniRef100_A8Q437 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q437_MALGO
Length = 691
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/157 (33%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +1
Query: 61 LRCV-RDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNC 237
+RCV R D S+T ++YL NG + F +EY++PV +VLKAL ++ D+EI+ S+
Sbjct: 263 IRCVGRHDLMSITNSVHYLDNGGVTLRFSWRKQEYMVPVVMVLKALVSATDKEIFASIV- 321
Query: 238 CYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESL 417
+ +R +++L + L+T EQC ++LG F+ V+ + S
Sbjct: 322 ---------QADTSNTFLTDRVELLLRSFKQYALWTGEQCLEYLGDKFRVVMRAPEDWSH 372
Query: 418 SIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ V E ++ + HLD DK+ LL+F+I+KLY+ V
Sbjct: 373 AQVGEELINRLVLTHLDMPRDKYRLLVFMIRKLYAFV 409
[40][TOP]
>UniRef100_A1DMM7 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1DMM7_NEOFI
Length = 1232
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV +++K L + D EI+E
Sbjct: 233 FGIQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMIMKGLVETNDREIFEG 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ +G + V +R +++L + L TR CR +LG+ F+PVL
Sbjct: 293 I---VGSATSKG---VNNTFVTDRVELLLRTYKAYNLHTRSSCRAYLGEKFKPVLGVPAD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S LR + HL N D+DKF L++F+I+KLY+LV
Sbjct: 347 MSNEDAGTEFLRKIVLPHLGNQNVTETQDYDKFKLIMFMIRKLYALV 393
[41][TOP]
>UniRef100_B4N0U3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N0U3_DROWI
Length = 1122
Score = 89.0 bits (219), Expect = 2e-16
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR D+SS + L+YL NGSAR F V R +PV L+LK L + DEEIY L
Sbjct: 202 VLVQTVRADESSFSNVLHYLNNGSARFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRLI 261
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
Y Q + +L +V++ G++T QCR +G F+ + V + E
Sbjct: 262 QGYET----------DQYYISCVQTMLRDVQNEGVYTHAQCRNFIGTLFRSRIAEVPEWE 311
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + VHLD+ DKF L++F++QKL+
Sbjct: 312 PAEAVTDFILRERIMVHLDSYEDKFQLIVFMVQKLF 347
[42][TOP]
>UniRef100_C5MG45 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MG45_CANTT
Length = 1166
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/167 (32%), Positives = 90/167 (53%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +RCVR DQ+S T L+YL +G+ F EYL+PV ++LKAL +
Sbjct: 206 RGASYTKYGIQIRCVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVTMILKALVETN 265
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI++ G G + +R +++L + L ++++ +LG F+
Sbjct: 266 DREIFD----------GIVGNDTGNSFLTDRLELLLRTYKKYNLNSQQETLAYLGDKFRV 315
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
V S V + VL+ + VHL ++ DKF +L+F+I+KLYSLV
Sbjct: 316 VFGATPDMSDIDVGKEVLKRIVLVHLPDNTDKFRMLLFMIRKLYSLV 362
[43][TOP]
>UniRef100_O74633 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Neurospora
crassa RepID=RPA2_NEUCR
Length = 1234
Score = 89.0 bits (219), Expect = 2e-16
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + +I+R VR D++S T L+YL +G+ F EYL+PV +++KAL +
Sbjct: 219 RGASYTPYGIIMRSVRPDETSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMIMKALVETN 278
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI+E L +G + + +R +++L + GL+++ Q R +LGQ F+
Sbjct: 279 DREIFEGL---VGPPQSKG---VANTFLTDRVELLLRTYKKYGLYSKTQTRAYLGQKFRV 332
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHL-------DNDHDKFNLLIFIIQKLYSLV 528
VL S V LR + VHL D DKFN+L+F+ +KLY+LV
Sbjct: 333 VLGVPDTMSDYEVGTEFLRKIVLVHLGSQDVTEQQDADKFNMLLFMCRKLYALV 386
[44][TOP]
>UniRef100_Q6C6G0 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6C6G0_YARLI
Length = 1165
Score = 88.6 bits (218), Expect = 3e-16
Identities = 54/173 (31%), Positives = 93/173 (53%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ S+ +F + +R VR DQSS T L+YL +G + F EYL+PV ++LKAL +
Sbjct: 206 RGSNYTTFGVQIRSVRPDQSSQTNVLHYLSDGGITMRFSWRKNEYLVPVMMILKALVETN 265
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI++ + + + +R +++L + L ++++ LG+ F+
Sbjct: 266 DREIFDGIVASEGSN----------SFLTDRLELLLRNYKSYKLTSKQENLAFLGEKFRI 315
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
V+D K S V +L+ + VHL ++ DKF +L+F+I+KLY+LV P
Sbjct: 316 VMDAPKDMSNEDVGRLMLKRVILVHLQDNTDKFRMLLFMIRKLYALVASECSP 368
[45][TOP]
>UniRef100_Q75DS1 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Eremothecium
gossypii RepID=RPA2_ASHGO
Length = 1198
Score = 88.6 bits (218), Expect = 3e-16
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +RCVR DQ+S T L+YL +G F EYL+PV L+LKALT++
Sbjct: 219 RGTSYSHYGVQIRCVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVVLILKALTDAS 278
Query: 208 DEEIYESLNCCYSEHYGRGDGAIG----TQLVRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG +G + +R +++L + R L R Q ++L
Sbjct: 279 DREIF--------------DGIVGADTSNSFLTDRLELLLRGFKKRFPQLLNRRQVLQYL 324
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL-DNDHDKFNLLIFIIQKLYSLV 528
G F+ VL S +V + +LR + VHL D + DK N+L+F+I+KLYSLV
Sbjct: 325 GDKFRVVLQASPDMSDYLVGQELLRRIVLVHLGDENTDKSNMLMFMIRKLYSLV 378
[46][TOP]
>UniRef100_Q5B697 DNA-directed RNA polymerase n=2 Tax=Emericella nidulans
RepID=Q5B697_EMENI
Length = 1231
Score = 88.2 bits (217), Expect = 4e-16
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EY++PV ++LKAL + D EI+E
Sbjct: 233 FGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYIIPVVMILKALVETNDREIFEG 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ S I V +R +++L + L +R +CR +G+ F+PVL
Sbjct: 293 IVGSASSE------GINNTFVTDRVELLLRTYKAYKLHSRSECRAFIGEKFKPVLGVPAD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
LR + HL N D+DKF +L+F+I+KLY+LV
Sbjct: 347 TPNEEAGTEFLRKVVLPHLGNQNVTETQDYDKFKMLMFMIRKLYALV 393
[47][TOP]
>UniRef100_C1GRK6 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1GRK6_PARBA
Length = 1220
Score = 88.2 bits (217), Expect = 4e-16
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LK L + D +I+E
Sbjct: 232 FGIQIRSVRPDQTSQTNFLHYLSDGNVTFRFTWRKNEYLVPVVMILKGLVQTNDRDIFER 291
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L H G I V +R +++L + G+ R+ R +LG+ F+PVL
Sbjct: 292 L----VGH--EGSKGIKNSFVTDRVELLLRTYKGYGIHGRDDIRAYLGEKFRPVLGMPTD 345
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 346 IPDEAVGVEFLRKVVLPHLGNHSVTDSQDNDKFNMILFMIRKLYTLV 392
[48][TOP]
>UniRef100_C1G8U3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1G8U3_PARBD
Length = 1242
Score = 88.2 bits (217), Expect = 4e-16
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LK L + D +I+E
Sbjct: 232 FGIQIRSVRPDQTSQTNFLHYLSDGNVTFRFTWRKNEYLVPVVMILKGLVQTNDRDIFER 291
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L H G I V +R +++L + G+ R+ R +LG+ F+PVL
Sbjct: 292 L----VGH--EGSEGIKNSFVTDRVELLLRTYKGYGIHGRDDIRAYLGEKFRPVLGMPTD 345
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 346 IPDEAVGVEFLRKVVLPHLGNHNVTDSQDNDKFNMILFMIRKLYTLV 392
[49][TOP]
>UniRef100_C0S2A9 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0S2A9_PARBP
Length = 1242
Score = 88.2 bits (217), Expect = 4e-16
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LK L + D +I+E
Sbjct: 232 FGIQIRSVRPDQTSQTNFLHYLSDGNVTFRFTWRKNEYLVPVVMILKGLVQTNDRDIFER 291
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L H G I V +R +++L + G+ R+ R +LG+ F+PVL
Sbjct: 292 L----VGH--EGSEGIKNSFVTDRVELLLRTYKGYGIHGRDDIRAYLGEKFRPVLGMPTD 345
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D+DKFN+++F+I+KLY+LV
Sbjct: 346 IPDEAVGVEFLRKVVLPHLGNHNVTDSQDNDKFNMILFMIRKLYTLV 392
[50][TOP]
>UniRef100_A1CTA9 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CTA9_ASPCL
Length = 1234
Score = 88.2 bits (217), Expect = 4e-16
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+P ++LKAL + D EI+E +
Sbjct: 237 IRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKSEYLVPAMMILKALVETNDREIFEGIVGS 296
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
S + V +R +++L + L +R CR +LG+ F+PVL S
Sbjct: 297 ASSK------GVSNTFVTDRVELLLRTYKGYNLHSRSSCRAYLGEKFKPVLGVPADMSNE 350
Query: 421 IVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
LR + HL N D+DKF L++F+I+KLY+LV
Sbjct: 351 DAGTEFLRKVVLPHLGNQNVTGTQDYDKFKLVMFMIRKLYALV 393
[51][TOP]
>UniRef100_Q54BM1 DNA-directed RNA polymerase I subunit rpa2 n=1 Tax=Dictyostelium
discoideum RepID=RPA2_DICDI
Length = 1130
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/158 (32%), Positives = 89/158 (56%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCVR D+SS+T L+Y+ +G + F +E+ LP L+LKAL ++ ++EIYE++
Sbjct: 194 ITIRCVRPDRSSITNNLHYINDGQTTLRFLYRRQEFFLPATLLLKALKDTTEKEIYENI- 252
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+GD + +R ++ L E + + T+E+ ++G F+ S
Sbjct: 253 -------VQGDNE--NTFLTDRVELSLREQKINNINTQEEVLDYIGSRFRARTQFPPSFS 303
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ + ++FVHL N +DK+NLLI +IQKLY++V
Sbjct: 304 NIKIGRWFINQFVFVHLPNYNDKYNLLILMIQKLYAMV 341
[52][TOP]
>UniRef100_Q0UYS5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UYS5_PHANO
Length = 1616
Score = 87.8 bits (216), Expect = 5e-16
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++LR +R DQ+S T L+YL +G+ + F EYL+PV +VLK+L + D EI+E L
Sbjct: 217 ILLRSMRPDQTSQTNALHYLSDGNVNLRFSWRKAEYLVPVMMVLKSLVETNDREIFEGL- 275
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+G Q V +R +++L + GL ++ + R +LGQ F+ VL + S
Sbjct: 276 ----VGAAGSEGLAEKQFVTDRVELLLRTYKVYGLHSKAKTRAYLGQKFKVVLQIPEDTS 331
Query: 415 LSIVAEAVLRDYLFVHLD-------NDHDKFNLLIFIIQKLYSLVD 531
LR + HL D DKF +L+F+I+KLYSLV+
Sbjct: 332 DEEAGTEFLRRIVLPHLGAYHITPAQDADKFRMLLFMIRKLYSLVE 377
[53][TOP]
>UniRef100_A7F6Y6 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7F6Y6_SCLS1
Length = 1165
Score = 87.4 bits (215), Expect = 6e-16
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F +++R VR DQ+S T L+YL +G+ F E+L+P ++LKAL + D+EI+E
Sbjct: 226 FGMLIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPAMMILKALVETNDKEIFEG 285
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L G + +R +++L + GL+T+ + R +LG+ F+ VL
Sbjct: 286 LVGT------PGSKGTDNTFLNDRVELLLRTYKAYGLYTKSKTRAYLGEKFRIVLGVPDT 339
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S V LR + VHL N D DKF +L+F+ +KLYSLV
Sbjct: 340 MSNYDVGTEFLRKIVLVHLGNTNVTEAQDKDKFKMLLFMTRKLYSLV 386
[54][TOP]
>UniRef100_A6SQF0 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SQF0_BOTFB
Length = 1207
Score = 87.4 bits (215), Expect = 6e-16
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F +++R VR DQ+S T L+YL +G+ F E+L+P ++LKAL + D+EI+E
Sbjct: 226 FGMLIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPAMMILKALVETNDKEIFEG 285
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L G + +R +++L + GL+T+ + R +LG+ F+ VL
Sbjct: 286 L------VGAAGSKGAENTFLTDRVELLLRTYKAYGLYTKSKTRAYLGEKFRIVLGVPDT 339
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S V LR + VHL N D DKF +L+F+ +KLYSLV
Sbjct: 340 MSNYDVGTEFLRKIVLVHLGNTDVTEAQDKDKFKMLLFMTRKLYSLV 386
[55][TOP]
>UniRef100_A3LWA8 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LWA8_PICST
Length = 1167
Score = 87.4 bits (215), Expect = 6e-16
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+
Sbjct: 211 FGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMILKALIETNDREIF-- 268
Query: 229 LNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLD 396
DG +G + +R +++L + L+++++ +LG F+ V
Sbjct: 269 ------------DGIVGADSANSFLTDRLELLLRTYKQYNLYSKQETLAYLGDKFRVVFG 316
Query: 397 GVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
S V + VLR + VHL ++ DKF +L+F+I+KLYSLV
Sbjct: 317 ATPDVSDIEVGKEVLRRIVLVHLPDNADKFRMLLFMIRKLYSLV 360
[56][TOP]
>UniRef100_P28365 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Euplotes
octocarinatus RepID=RPA2_EUPOC
Length = 1166
Score = 87.4 bits (215), Expect = 6e-16
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCVRDD ++ T+ L YL +GS + +E+L+P+ L+LKAL N D +IYE +
Sbjct: 199 MRCVRDDFTAQTITLTYLSDGSVSLRLIYQKQEFLIPIILILKALKNCTDRQIYERI--- 255
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G + + +R + IL +DL ++ +Q + +G F+ VL G+ E+
Sbjct: 256 -------VKGNFNQRQISDRVEAILAVGKDLNIYDSDQSKALIGSRFRIVLAGITSETSD 308
Query: 421 IVA-EAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
I A + L ++ +H D+ KF+ LI +I KLY+ V
Sbjct: 309 IDAGDLFLSKHICIHTDSYEAKFDTLILMIDKLYASV 345
[57][TOP]
>UniRef100_B4KFJ3 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KFJ3_DROMO
Length = 1122
Score = 87.0 bits (214), Expect = 8e-16
Identities = 55/159 (34%), Positives = 90/159 (56%), Gaps = 4/159 (2%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VRDD+ S+T L+YL NG+AR F V R +PV L+LK L + DE+IY N
Sbjct: 202 IMVQTVRDDEMSLTNVLHYLNNGTARFMFSHVKRLSYVPVCLILKCLMDYTDEQIY---N 258
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLG----QHFQPVLDGV 402
C G Q + +L +V++ G++T QCR +G FQ V + +
Sbjct: 259 CLV-------QGYESDQYYLTCVQSMLRDVQNEGVYTSAQCRSFIGTLFRSRFQEVPEWM 311
Query: 403 KKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
E+ V E ++R+ + VHL+ + +KF L++F++QKL+
Sbjct: 312 PDEA---VTEFIIRERIMVHLNTNEEKFQLIVFMVQKLF 347
[58][TOP]
>UniRef100_C7YYG1 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YYG1_NECH7
Length = 1195
Score = 87.0 bits (214), Expect = 8e-16
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ILR VR D++S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 225 IILRAVRPDETSQTNVLHYLNDGNMTFRFSWRKNEYLIPVMMILKALVETNDREIFEGL- 283
Query: 235 CCYSEHYGRGDGAIGTQ-----LVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDG 399
G +G++ + +R +++L + L+++ + R +LG+ F+ VL
Sbjct: 284 ----------VGPVGSKSTENTFLTDRIELLLRTYKSYNLYSKSETRAYLGEKFRVVLGV 333
Query: 400 VKKESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
S V LR + VHL N D++KF LL+F+I+KLY+LV
Sbjct: 334 PDTMSNLDVGTEFLRRIVLVHLGNVDVTEEQDNEKFKLLLFMIRKLYALV 383
[59][TOP]
>UniRef100_A4RK90 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RK90_MAGGR
Length = 1240
Score = 86.7 bits (213), Expect = 1e-15
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ILR VR D++S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 225 IILRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMILKALVETNDSEIFEGL- 283
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
C G +G + +R +++L + GL+++ + R +LG+ F+ VL S
Sbjct: 284 -CGPP----GSKGVGNSFLTDRVELLLRTYKSYGLYSKTKTRAYLGEKFRVVLGVQDSMS 338
Query: 415 LSIVAEAVLRDYLFVHL-------DNDHDKFNLLIFIIQKLYSLV 528
V L+ + VHL D DKF +++ +++KLY+LV
Sbjct: 339 HYDVGTEFLKKIVLVHLGSHDVTEQEDADKFRMILVMMRKLYALV 383
[60][TOP]
>UniRef100_UPI000023E481 hypothetical protein FG05627.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E481
Length = 1201
Score = 86.3 bits (212), Expect = 1e-15
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ILR VR D++S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 225 IILRAVRPDETSQTNVLHYLNDGNMTFRFSWRKNEYLVPVMMILKALVETNDREIFEGL- 283
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
G A G + +R +++L + L+++ R LG+ F+ VL +
Sbjct: 284 -----VGPAGSKAAGNTFLTDRIELLLRTYKSYNLYSKSDTRAFLGEKFRVVLGVPDTMT 338
Query: 415 LSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + VHL N D++K+ L++F+I+KLY+LV
Sbjct: 339 NYEVGTEFLRKIVLVHLGNVDVTEEQDNEKYKLILFMIRKLYALV 383
[61][TOP]
>UniRef100_Q5AFK6 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5AFK6_CANAL
Length = 1166
Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +R VR DQ+S T L+YL +G+ F E+L+PV ++LKAL +
Sbjct: 206 RGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVVMILKALIETN 265
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G + +R +++L + L+++++ +LG
Sbjct: 266 DREIF--------------DGIVGNDTENSFLTDRLELLLRTYKTYNLYSQQETLAYLGD 311
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL N+ DKF +L+F+I+KLYSLV
Sbjct: 312 KFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNADKFRMLLFMIRKLYSLV 362
[62][TOP]
>UniRef100_C4YTC6 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YTC6_CANAL
Length = 1166
Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +R VR DQ+S T L+YL +G+ F E+L+PV ++LKAL +
Sbjct: 206 RGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVVMILKALIETN 265
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G + +R +++L + L+++++ +LG
Sbjct: 266 DREIF--------------DGIVGNDTENSFLTDRLELLLRTYKTYNLYSQQETLAYLGD 311
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL N+ DKF +L+F+I+KLYSLV
Sbjct: 312 KFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNADKFRMLLFMIRKLYSLV 362
[63][TOP]
>UniRef100_B9WJL4 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WJL4_CANDC
Length = 1166
Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +R VR DQ+S T L+YL +G+ F E+L+PV ++LKAL +
Sbjct: 206 RGASYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFRFSWRKNEFLVPVVMILKALIETN 265
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQ----LVRERAKIILDEVRDLGLFTREQCRKHLGQ 375
D EI+ DG +G + +R +++L + L+++++ +LG
Sbjct: 266 DREIF--------------DGIVGNDTENSFLTDRLELLLRTYKTYNLYSQQETLAYLGD 311
Query: 376 HFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
F+ V S V + VL+ + VHL N+ DKF +L+F+I+KLYSLV
Sbjct: 312 KFRVVFGASPDMSDIEVGKEVLKRIVLVHLPNNTDKFRMLLFMIRKLYSLV 362
[64][TOP]
>UniRef100_B2A911 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2A911_PODAN
Length = 1234
Score = 86.3 bits (212), Expect = 1e-15
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+R VR D++S T L+YL +G+ F EYL+PV ++LKAL + D EI+ESL
Sbjct: 225 IIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMILKALVETNDREIFESL- 283
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+G + + +R +++L + L+T++Q R +LGQ F+ VL +
Sbjct: 284 --VGPPTSKG---VENTFLTDRVELLLRTYKTYNLYTKKQTRAYLGQKFRVVLGVPDTMT 338
Query: 415 LSIVAEAVLRDYLFVHL-------DNDHDKFNLLIFIIQKLYSLV 528
V LR + VHL + D DKF +L+F+ +KLY+LV
Sbjct: 339 DYEVGTEFLRKVVLVHLGCNDVTEEQDTDKFKMLLFMCRKLYALV 383
[65][TOP]
>UniRef100_A2QVK7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QVK7_ASPNC
Length = 1213
Score = 85.9 bits (211), Expect = 2e-15
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E +
Sbjct: 237 IRSVRPDQTSQTNVLHYLTDGNLTFRFSWRKAEYLVPVMMILKALVETNDREIFEGIVGS 296
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
S I V +R +++L + +R CR +LG+ F+PVL S
Sbjct: 297 ASSE------GIKNTFVTDRVELLLRVYKAYNTHSRAACRAYLGEKFRPVLGVPADMSNE 350
Query: 421 IVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
LR + HL N D+DKF +++F+I+KLY+LV
Sbjct: 351 DAGTEFLRKVVLPHLGNQNVTENQDYDKFKMILFMIRKLYALV 393
[66][TOP]
>UniRef100_C4Y3J9 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y3J9_CLAL4
Length = 1232
Score = 85.5 bits (210), Expect = 2e-15
Identities = 53/167 (31%), Positives = 88/167 (52%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S F + +RCVR DQ+S T L+YL++G+ F EYL+PV +VLKAL +
Sbjct: 269 RGASYTKFGVQIRCVRPDQTSQTNVLHYLKDGNVTFRFSWRKNEYLVPVVMVLKALVETN 328
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI++ + + + + +R +++L + L +++ +LG F+
Sbjct: 329 DREIFDGIVAADTSN----------SFLTDRLELLLRTYKQYNLHSQKSTLAYLGDKFRV 378
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
S V VL+ + VHL ++ DKF LL+F I+KLY+LV
Sbjct: 379 AFGATPDVSDIDVGREVLKRIVLVHLPDNADKFRLLLFSIRKLYTLV 425
[67][TOP]
>UniRef100_Q22C62 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q22C62_TETTH
Length = 1178
Score = 85.1 bits (209), Expect = 3e-15
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + ++CVR+D S T+ L+Y+ +GS + +E+L+P ++LKAL + D +IY
Sbjct: 210 FAVQMKCVREDLYSKTITLHYVSDGSVFLRILHRKQEFLIPAIVILKALADISDLQIYNK 269
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L G + +R ++++ + + L T+E+C HLG++F+ VL+
Sbjct: 270 L----------VKGQSSKSAISDRVEVLIRGSKAMSLNTKEECLAHLGKNFRVVLNITNP 319
Query: 409 E-SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
E + V E + + + VHL+N+ DK N + +I KLY+LV P
Sbjct: 320 EITDKQVGEIFMNENICVHLNNNIDKLNTICVMISKLYALVSDEICP 366
[68][TOP]
>UniRef100_Q29N37 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29N37_DROPS
Length = 1126
Score = 84.7 bits (208), Expect = 4e-15
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VRDD+ S + L+YL NG+AR F + R +PV L+LK L + DEEIY L
Sbjct: 206 IMVQTVRDDECSFSNVLHYLNNGTARFMFSHIKRLSYVPVCLILKCLMDYTDEEIYNRLV 265
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
Y + Q + +L +V + G++T QCR +G F+ + V + +
Sbjct: 266 QGYEK----------DQYYVSSVQTMLRDVHNEGVYTHAQCRSFIGTLFRSRFNVVPEWQ 315
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + VHLD +KF L++F++QKL+
Sbjct: 316 PDEDVTDFILRERILVHLDTYEEKFQLIVFMVQKLF 351
[69][TOP]
>UniRef100_B4Q634 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4Q634_DROSI
Length = 1129
Score = 84.3 bits (207), Expect = 5e-15
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D+SS++ ++YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 MLVQTVREDESSLSNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRL- 267
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G Q + +L EV++ ++T QC+ +G F+ V + +
Sbjct: 268 ---------VQGYESDQYYVSCVQSMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + +HLDN DKF L++F+IQKL+
Sbjct: 319 PDEDVTDFILRERVMIHLDNYEDKFQLIVFMIQKLF 354
[70][TOP]
>UniRef100_B4P2D8 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P2D8_DROYA
Length = 1129
Score = 84.3 bits (207), Expect = 5e-15
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D+SS++ ++YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 MLVQTVREDESSLSNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDFTDEEIYNRLV 268
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
Y Q + +L EV++ ++T QC+ +G F+ V + +
Sbjct: 269 KGYE----------SDQYYVSCVQSMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + +HLDN DKF L++F+IQKL+
Sbjct: 319 PDEDVTDFILRERVMIHLDNYEDKFQLIVFMIQKLF 354
[71][TOP]
>UniRef100_B4LTK7 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LTK7_DROVI
Length = 1122
Score = 84.3 bits (207), Expect = 5e-15
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VRDD+ S+T L+YL NG+AR F V R +PV L+LK L + DE+IY N
Sbjct: 202 VMVQTVRDDELSLTNVLHYLNNGTARFMFSHVKRLSYVPVCLILKCLMDYTDEQIY---N 258
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLG----QHFQPVLDGV 402
C G Q + +L +V++ G++T QCR +G F V D +
Sbjct: 259 CLV-------QGYESDQYYLTCVQSMLRDVQNEGVYTSAQCRSFIGTLFRSRFPEVPDWL 311
Query: 403 KKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
E+ V E ++R+ + VHL + +KF L++F++QKL+
Sbjct: 312 PDEA---VTEYIMRERIMVHLATNEEKFQLIVFMVQKLF 347
[72][TOP]
>UniRef100_B4JDN9 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JDN9_DROGR
Length = 1125
Score = 83.6 bits (205), Expect = 9e-15
Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VRDD+ S+T L+YL NG+AR F + R +PV L+LK L + DE+IY N
Sbjct: 205 VMVQTVRDDELSLTNTLHYLNNGTARFMFSHMKRLSYVPVCLILKCLMDYTDEQIY---N 261
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLG----QHFQPVLDGV 402
C G Q + +L +V++ G++T QCR +G F V + +
Sbjct: 262 CLV-------QGYESDQYYLTCVQSMLRDVQNEGVYTSAQCRSFIGTLFRSRFPEVPEWL 314
Query: 403 KKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
E+ V E +LR+ + VHL + +KF L++F++QKL+
Sbjct: 315 PDEA---VTEFILRERIMVHLQTNEEKFQLIVFMVQKLF 350
[73][TOP]
>UniRef100_B3N7P8 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3N7P8_DROER
Length = 1129
Score = 83.6 bits (205), Expect = 9e-15
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D+SS++ ++YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 MLVQTVREDESSLSNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRL- 267
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G Q + +L EV++ ++T QC+ +G F+ V + +
Sbjct: 268 ---------VQGYESDQYYVSCVQSMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + +HLD + DKF L++F+IQKL+
Sbjct: 319 PDEDVTDFILRERVMIHLDTNEDKFQLIVFMIQKLF 354
[74][TOP]
>UniRef100_B0W5T2 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0W5T2_CULQU
Length = 1129
Score = 83.6 bits (205), Expect = 9e-15
Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++RCVR DQ+S L+YL NG+A++ F I +P+ ++LKAL++ D EIY+ L
Sbjct: 202 IMIRCVRTDQTSTNNVLHYLVNGTAKLMFSIRRSLTFIPIMMLLKALSDYTDNEIYKRLI 261
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
Y E Q + + +L E+ + G+ + +C+ ++G+ F+ L +
Sbjct: 262 VGYEE----------DQYYKHCIQNMLRELHEEGIHNQVECKDYMGKVFRTKLYYLPAWY 311
Query: 415 LSIV-AEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
+ +L+ + +HLD+D DKFNLL+F++QKL++
Sbjct: 312 TDAQRTDHLLKTCVLIHLDDDLDKFNLLVFMMQKLFT 348
[75][TOP]
>UniRef100_Q2HEC1 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HEC1_CHAGB
Length = 1188
Score = 83.6 bits (205), Expect = 9e-15
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+I+R VR D++S T L+YL +G+ F EYL+PV ++LKAL + D EI+E L
Sbjct: 179 IIVRSVRPDETSQTNVLHYLNDGNVTFRFSWRKNEYLVPVMMILKALIETNDREIFEGL- 237
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+G I + +R +++L + GL+T+ Q R +LG+ F+ VL + S
Sbjct: 238 --VGPPNSKG---IENTFLTDRVELLLRTYKTYGLYTKTQTRAYLGEKFRVVLGVPETMS 292
Query: 415 LSIVAEAVLRDYLFVHL-------DNDHDKFNLLIFIIQKLYSLV 528
V LR + V+L + D DKF +L+F+ +KLY+LV
Sbjct: 293 DYEVGTEFLRRIVLVNLGCVDVTEEQDLDKFKMLLFMCRKLYALV 337
[76][TOP]
>UniRef100_B6HRF9 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HRF9_PENCW
Length = 1249
Score = 82.8 bits (203), Expect = 2e-14
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R VR DQ+S T L+YL +G+ F EYL+PV ++LKAL + D EI+E+
Sbjct: 233 FGVQIRSVRPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMILKALAETNDREIFEA 292
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
+ S + V +R +++L ++ CR HLG+ F+PVL
Sbjct: 293 IVGAASSK------GMSNTFVTDRVELLLRTYHAYQKHSQYDCRSHLGKAFRPVLGVPAD 346
Query: 409 ESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
V LR + HL N D DKF L+ F+I+KLYS V
Sbjct: 347 MPDEEVGTEFLRKVVLPHLGNENVTESQDWDKFKLITFMIRKLYSTV 393
[77][TOP]
>UniRef100_P20028 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Drosophila
melanogaster RepID=RPA2_DROME
Length = 1129
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D+SS++ ++YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 MLVQTVREDESSLSNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRL- 267
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G Q + +L EV++ ++T QC+ +G F+ V + +
Sbjct: 268 ---------VQGYESDQYYVSCVQAMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + +HLD DKF L++F+IQKL+
Sbjct: 319 PDDDVTDFILRERVMIHLDTYEDKFQLIVFMIQKLF 354
[78][TOP]
>UniRef100_B4ICW4 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4ICW4_DROSE
Length = 1129
Score = 82.0 bits (201), Expect = 3e-14
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D+SS++ ++YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 MLVQTVREDESSLSNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRL- 267
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G Q + +L EV++ ++T QC+ +G F+ V + +
Sbjct: 268 ---------VQGYESDQYYVSCVQSMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +LR+ + +HLD DKF L++F+IQKL+
Sbjct: 319 PDEDVTDFILRERVMIHLDTYEDKFQLIVFMIQKLF 354
[79][TOP]
>UniRef100_B3MUI2 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MUI2_DROAN
Length = 1129
Score = 82.0 bits (201), Expect = 3e-14
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VR+D++S L+YL NG+A+ F V R +PV L+LK L + DEEIY L
Sbjct: 209 VLVQTVREDETSFNNVLHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRLI 268
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G Q + +L EV++ ++T QCR +G F+ V + +
Sbjct: 269 ----------QGYESDQYYLSCVQSMLREVQNENVYTHSQCRSFIGNLFRSRFPEVPEWQ 318
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLY 519
V + +L++ + VHLD+ DKF L++F++QKL+
Sbjct: 319 PDEDVTDFILKERIMVHLDSYEDKFQLIVFMVQKLF 354
[80][TOP]
>UniRef100_C3YW52 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YW52_BRAFL
Length = 1140
Score = 81.6 bits (200), Expect = 3e-14
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCV DQ++ T+ L+YL NG+ + F ++ +P+ ++LKAL + D+ IY L
Sbjct: 210 MRCVTKDQTAATIVLHYLTNGTVTLCFVYKKEQFFVPLIIILKALVETTDQHIYSEL--- 266
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ---PVLDGVKKE 411
G+ D + V +L + ++ GL T+ K++G+ F+ PV D E
Sbjct: 267 ---IKGKEDNSFFKGCVAS----MLRQAQNEGLMTQAGILKYIGERFRVKLPVPDWYTDE 319
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
V + +LR + +HLD+D DKFN L+ + QKL++L
Sbjct: 320 E---VGQFLLRQCVCIHLDSDWDKFNTLVLMTQKLFAL 354
[81][TOP]
>UniRef100_UPI00017B4E1B UPI00017B4E1B related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4E1B
Length = 1134
Score = 81.3 bits (199), Expect = 4e-14
Identities = 48/158 (30%), Positives = 84/158 (53%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCV++D ++V + L+YL NG+ + F + LP+G LKAL + D +IY+ L
Sbjct: 213 MRCVKEDHTAVNMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFTDFQIYQEL--- 269
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
GR D + + V E +++++ G TR Q LG+ F+ ++ + +
Sbjct: 270 ---IKGREDNSFYKKCVTEMLRLVME-----GCVTRSQVLSFLGERFRVKMNLPEWYTHQ 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L D + +HL +D +KFNLL + +KL++ Q
Sbjct: 322 QCATILLEDCICIHLKSDAEKFNLLCLMTRKLFTFAKQ 359
[82][TOP]
>UniRef100_B6QA38 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QA38_PENMQ
Length = 1261
Score = 80.5 bits (197), Expect = 7e-14
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Frame = +1
Query: 46 SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE 225
+F + +R R DQ++ T L+YL +G+ F +EYL+PV ++LKAL + D EI+E
Sbjct: 239 TFGVQIRSARPDQTTQTNVLHYLSDGNVTFRFSWRKQEYLVPVMMILKALVETNDREIFE 298
Query: 226 SLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVK 405
+ G+ T V +R +++L +++R R +LG+ F+PVL
Sbjct: 299 GI-----VGNASSKGSANT-FVTDRVELLLRTFHGYKIWSRSDARAYLGKKFRPVLFAPA 352
Query: 406 KESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
+ LR + HL N D+DKF L++F+I+KLYS V
Sbjct: 353 TWTHEECGTEFLRKIVLPHLGNQNVTTTQDYDKFKLILFMIRKLYSFV 400
[83][TOP]
>UniRef100_Q8SSB7 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SSB7_ENCCU
Length = 1062
Score = 80.1 bits (196), Expect = 1e-13
Identities = 54/168 (32%), Positives = 87/168 (51%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
K+S + + +RCV D+ L+Y +G+ + + E+L P+ LVLKAL N+
Sbjct: 174 KTSFFSDYMVSMRCVGRDEIGHMNFLHYCTDGNVVIKIFHKKYEFLFPLVLVLKALVNTT 233
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
DEE++ GA+G +RA +L + +F+R +C ++G F
Sbjct: 234 DEELF---------------GALGG---GQRAVHLLKCFAEHNVFSRTECLDYIGSRFSA 275
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVD 531
+L+ ES + VAE +L Y+ HL ++ DKFN LI +KL+S VD
Sbjct: 276 ILN---FESKAEVAEEILSKYVVSHLSSNLDKFNFLILAARKLFSFVD 320
[84][TOP]
>UniRef100_A0BY74 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0BY74_PARTE
Length = 1115
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/156 (28%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
++CVR DQ + T+ L+YL +G+ + + +E +PV ++L+ALT+ D +IY+ +
Sbjct: 192 MKCVRSDQYARTITLHYLMDGNVYLRIILKKKELQMPVIILLRALTDMNDYQIYQQI--- 248
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
+ D + +R ++++ + + G+ T++ +++G+ + L+ E+
Sbjct: 249 VRSQADKSD-------ISDRVEVMIADAKSRGINTQKDALEYIGRLLRVELNIFNPETTD 301
Query: 421 I-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+ V LR+++ VHLDND DK ++L+ I+KLY+L
Sbjct: 302 LQVGRIFLREHICVHLDNDQDKASILLLCIEKLYAL 337
[85][TOP]
>UniRef100_B8LZJ7 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8LZJ7_TALSN
Length = 1264
Score = 79.7 bits (195), Expect = 1e-13
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Frame = +1
Query: 46 SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE 225
+F + +R R DQ++ T L+YL +G+ F +EYL+PV ++LKAL + D EI+E
Sbjct: 239 TFGVQIRSARPDQTTQTNVLHYLSDGNVTFRFSWRKQEYLVPVMMILKALVETNDREIFE 298
Query: 226 SLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVK 405
+ S G T V +R +++L + +++R R +LG+ F+PVL
Sbjct: 299 GIVGNAST-----KGPANT-FVTDRVELLLRTFKGYKIYSRSDARAYLGKKFRPVLFAPA 352
Query: 406 KESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQKLYSLV 528
+ LR + HL N D+DKF L++F+I+KLY+ V
Sbjct: 353 TWTHEECGAEFLRKIVLPHLGNQNVTTTQDYDKFKLMLFMIRKLYAFV 400
[86][TOP]
>UniRef100_A0E2A7 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0E2A7_PARTE
Length = 1115
Score = 79.3 bits (194), Expect = 2e-13
Identities = 45/167 (26%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
K + F + ++CVR DQ + T+ L+YL +G+ + + +E +PV ++L+ALT+
Sbjct: 181 KGFNFSPFAVQMKCVRSDQYARTITLHYLMDGNVYLRIILKKKELQMPVIILLRALTDMN 240
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D +IY+ + + D + +R ++++ + + G+ T++ +++G+ +
Sbjct: 241 DYQIYQQI---VRSQADKSD-------ISDRVEVMIADAKSRGINTQKDALEYIGRLLRV 290
Query: 388 VLDGVKKESLSI-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
L+ E+ + V LR+++ VHL+ND DK ++L+ I+KLY+L
Sbjct: 291 ELNIFNPETTDLQVGRIFLREHICVHLENDQDKASILLLCIEKLYAL 337
[87][TOP]
>UniRef100_Q6CW73 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CW73_KLULA
Length = 1203
Score = 79.3 bits (194), Expect = 2e-13
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV ++L+AL ++
Sbjct: 225 RGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPVVMILRALCDTN 284
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILD--EVRDLGLFTREQCRKHLGQHF 381
D EI+ +H GD + +R +++L + R L R+Q ++LG F
Sbjct: 285 DREIF--------DHVVGGD--TSNSFLTDRLELLLRGFKKRYPTLQNRKQTLQYLGDKF 334
Query: 382 QPVLDGVKKESLSIVAEAVLRDYLFVHL-DNDHDKFNLLIFIIQKLYSLV 528
+ V + V + +L + VHL +N+ DKFN+L+F+I+KLYSLV
Sbjct: 335 RVVFQASPDMTDLQVGQELLNRIVLVHLGENNKDKFNMLLFMIRKLYSLV 384
[88][TOP]
>UniRef100_C7GV35 Rpa135p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GV35_YEAS2
Length = 1203
Score = 79.0 bits (193), Expect = 2e-13
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV ++LKAL ++
Sbjct: 225 RGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVVMILKALCHTS 284
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQL----VRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG + + +R +++L + R L R Q ++L
Sbjct: 285 DREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHLQNRTQVLQYL 330
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL D DKF +L+F+I+KLYSLV
Sbjct: 331 GDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRKLYSLV 385
[89][TOP]
>UniRef100_A6ZWQ5 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae YJM789
RepID=A6ZWQ5_YEAS7
Length = 1203
Score = 79.0 bits (193), Expect = 2e-13
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV ++LKAL ++
Sbjct: 225 RGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVVMILKALCHTS 284
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQL----VRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG + + +R +++L + R L R Q ++L
Sbjct: 285 DREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPQLQNRTQVLQYL 330
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL D DKF +L+F+I+KLYSLV
Sbjct: 331 GDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRKLYSLV 385
[90][TOP]
>UniRef100_P22138 DNA-directed RNA polymerase I subunit RPA2 n=3 Tax=Saccharomyces
cerevisiae RepID=RPA2_YEAST
Length = 1203
Score = 79.0 bits (193), Expect = 2e-13
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV ++LKAL ++
Sbjct: 225 RGASYSHYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLVPVVMILKALCHTS 284
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQL----VRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG + + +R +++L + R L R Q ++L
Sbjct: 285 DREIF--------------DGIIGNDVKDSFLTDRLELLLRGFKKRYPHLQNRTQVLQYL 330
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL D DKF +L+F+I+KLYSLV
Sbjct: 331 GDKFRVVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLLFMIRKLYSLV 385
[91][TOP]
>UniRef100_UPI00017586B7 PREDICTED: similar to RNA polymerase I 135kD subunit CG4033-PA n=1
Tax=Tribolium castaneum RepID=UPI00017586B7
Length = 993
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Frame = +1
Query: 34 SSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDE 213
S CG + +RCVR+DQ++ T L+++ +G+A++ F Y P+ L+LK L + CD+
Sbjct: 67 SDCG---ISMRCVREDQTATTNVLHFVTDGTAKLMFSYKKVLYYTPLVLILKCLCDYCDQ 123
Query: 214 EIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ-PV 390
IY+ L Y + + +L + L T E C+ +LG+ F+
Sbjct: 124 FIYQKLIQGYQH----------DSYYLDCVQNMLRNLHIENLHTHEDCKVYLGKMFRVKF 173
Query: 391 LDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
+ + S +A+ +L+ + +HLD DKFN+L+F+ QKL+ V P
Sbjct: 174 YECPDWLTDSEIADFILKKCIMIHLDKPEDKFNMLVFMCQKLFVFVQDKCKP 225
[92][TOP]
>UniRef100_C4MAB3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4MAB3_ENTHI
Length = 1106
Score = 78.6 bits (192), Expect = 3e-13
Identities = 50/167 (29%), Positives = 92/167 (55%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
K + + +I+RC+RDD +++T L++L NG + F +E+ +PV L+L+
Sbjct: 174 KGAHFTKYGIIIRCMRDDITTLTNTLHFLDNGKVSLRFIFKKQEFFIPVVLLLRVYGGMS 233
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI++ + E+ + A LVR L+ GL + EQ ++G F+
Sbjct: 234 DREIFQLITMNNYENSNLVNAA--EMLVRRENGSPLN-----GLNSPEQVLTYIGSKFRL 286
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
++DG + + + + + VL ++ VHL + +K +LLIF++QKL++LV
Sbjct: 287 IMDGTEGVNDTELGKRVLDEFCLVHLSSYAEKSDLLIFMLQKLFALV 333
[93][TOP]
>UniRef100_UPI0000E4A24D PREDICTED: hypothetical protein, partial n=2 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E4A24D
Length = 643
Score = 78.2 bits (191), Expect = 4e-13
Identities = 52/171 (30%), Positives = 88/171 (51%)
Frame = +1
Query: 10 KWQ*ILKSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLK 189
KW+ + F + +RCVR+DQS VT+ L+YL GS V F + LP+ LVL+
Sbjct: 80 KWK--TRGKGFTEFGVQMRCVRNDQSIVTITLHYLTTGSIVVSFAYNKEIFFLPLLLVLR 137
Query: 190 ALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHL 369
AL ++ D+ +Y+ L G + +L + + L ++EQ +H+
Sbjct: 138 ALVDTSDQHVYDEL----------VKGKEKDTFLIGCVTGMLRQTQTQNLSSQEQALEHI 187
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
G+ F+ L + A+ +L+ + VHLD++ DKFN L F+ +KL++
Sbjct: 188 GERFRIKLSVPPWHTNVQTAKFLLQQCICVHLDSNQDKFNTLAFMARKLFA 238
[94][TOP]
>UniRef100_UPI00017920E2 PREDICTED: similar to DNA-directed RNA polymerase I 135 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017920E2
Length = 1120
Score = 77.8 bits (190), Expect = 5e-13
Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++RCV+DD ++ T L+YL NG+A++ I R + P+ L+++ LTNS DE I+ +
Sbjct: 202 ILIRCVKDDLTT-TNNLHYLTNGTAKLMIPIKKRVFYAPIFLIMRCLTNSSDEFIFRHII 260
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK-E 411
G D + V E ++ + + + +E ++++G F+P + + +
Sbjct: 261 ------KGHEDDLYFIRSVME----MMRSLHESNIHCQEDAKEYIGILFRPRFYELPEWK 310
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSL 543
+ V + +LR Y+ +HL+ D DK LL+F++QKL+S+ L
Sbjct: 311 TNKEVCDHMLRSYVLIHLNTDFDKLKLLVFMLQKLFSVAQNKCL 354
[95][TOP]
>UniRef100_Q7QG74 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QG74_ANOGA
Length = 1152
Score = 77.8 bits (190), Expect = 5e-13
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCVR+DQ S L+YL NG+A++ + +PV ++LKAL + D EIY+ L
Sbjct: 209 VFIRCVREDQYSTRNVLHYLTNGTAKLMISVSRALSFIPVMMILKALGDRSDNEIYKKLT 268
Query: 235 CC-YSEHYGRGDGAIGTQLVRERAKIILDEVRDL---GLFTREQCRKHLGQHFQPVLDGV 402
C S+ Y + + I+ +RDL L + ++CR ++G + L +
Sbjct: 269 ACDESDQYYK--------------RCIMAMLRDLHAENLHSSQECRSYMGMLLRRRLMDI 314
Query: 403 KKESLSIVAEA---VLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ +A +L+ + +HLD+ DKFNLL+ ++ KLY++V
Sbjct: 315 NLPAWYSDEQAGHFLLQHCVLIHLDSVEDKFNLLVHMVHKLYAVV 359
[96][TOP]
>UniRef100_B0ERH0 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0ERH0_ENTDI
Length = 1106
Score = 77.8 bits (190), Expect = 5e-13
Identities = 50/167 (29%), Positives = 90/167 (53%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
K + + +I+RC+R+D +++T L++L NG + F +E+ +PV L+L+
Sbjct: 174 KGAHFTKYGIIIRCMREDITTLTNTLHFLDNGKVTLRFIFKKQEFFIPVVLLLRVYGGMS 233
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 387
D EI+E + E+ + A LVR L+ GL T EQ ++G F+
Sbjct: 234 DREIFELITMNNYENSNLVNAA--EMLVRRENGSPLN-----GLNTPEQVLSYIGSKFRL 286
Query: 388 VLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
++D + + + + VL ++ VHL + +K +LLIF++QKL++LV
Sbjct: 287 IMDSTEGVNDIELGKRVLEEFCLVHLSSYSEKSDLLIFMLQKLFALV 333
[97][TOP]
>UniRef100_Q4V967 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=Q4V967_DANRE
Length = 1132
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/162 (29%), Positives = 85/162 (52%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
+ + +RCV+++ +++ + L+YL NG+ V F + LP+G LKAL + D +IY+
Sbjct: 207 YAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLGFALKALVDYSDYQIYQE 266
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L GR D + V E +I++D+ G T+ + +LG+ F+ L+ +
Sbjct: 267 L------IKGREDNSFYKSCVSEMLRIVMDQ----GCTTKIKVLNYLGERFRVKLNLPEW 316
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
+ A +L + L +HL D +KF +L + +KL+S Q
Sbjct: 317 FTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
[98][TOP]
>UniRef100_B8JKD7 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=B8JKD7_DANRE
Length = 1132
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/162 (29%), Positives = 85/162 (52%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
+ + +RCV+++ +++ + L+YL NG+ V F + LP+G LKAL + D +IY+
Sbjct: 207 YAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLGFALKALVDYSDYQIYQE 266
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L GR D + V E +I++D+ G T+ + +LG+ F+ L+ +
Sbjct: 267 L------IKGREDNSFYKSCVSEMLRIVMDQ----GCTTKIKVLNYLGERFRVKLNLPEW 316
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
+ A +L + L +HL D +KF +L + +KL+S Q
Sbjct: 317 FTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
[99][TOP]
>UniRef100_A2VCY0 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2VCY0_DANRE
Length = 1132
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/162 (29%), Positives = 85/162 (52%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
+ + +RCV+++ +++ + L+YL NG+ V F + LP+G LKAL + D +IY+
Sbjct: 207 YAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYRKELFFLPLGFALKALVDYSDYQIYQE 266
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L GR D + V E +I++D+ G T+ + +LG+ F+ L+ +
Sbjct: 267 L------IKGREDNSFYKSCVSEMLRIVMDQ----GCTTKIKVLNYLGERFRVKLNLPEW 316
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
+ A +L + L +HL D +KF +L + +KL+S Q
Sbjct: 317 FTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQ 358
[100][TOP]
>UniRef100_Q6FPQ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FPQ9_CANGA
Length = 1202
Score = 76.6 bits (187), Expect = 1e-12
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV +++KAL ++
Sbjct: 222 RGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPVVMIMKALVDTS 281
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGT----QLVRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG+ + +R +++L + R L R Q ++L
Sbjct: 282 DREIF--------------DGIIGSNTNNSFLTDRLELLLRGFKKRYPQLKNRTQVLQYL 327
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL + + DKF +L+F+++KLYSLV
Sbjct: 328 GDKFRLVFQASPDKSDYEVGQEVLNRIVLVHLGSNGNMDKFRMLLFMVRKLYSLV 382
[101][TOP]
>UniRef100_B2VTW1 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VTW1_PYRTR
Length = 1178
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+R +R DQ+S T L+YL +G+ F EYL+P+ +++KAL + D EI+E L
Sbjct: 232 IRSMRPDQTSQTNALHYLDDGNVNFRFSWRKSEYLVPLVMIMKALVETNDREIFEGL--- 288
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G Q V +R +++L + GL T+ + R LGQ F+ VL S
Sbjct: 289 --VGAAGSKGLREKQFVSDRVELLLRTFKVYGLHTKAKTRAFLGQKFKVVLQLPPDISDF 346
Query: 421 IVAEAVLRDYLFVHLD-------NDHDKFNLLIFIIQKLYSLVD 531
LR + HL D DKF +L+F+ +KLYSLV+
Sbjct: 347 DGGTEFLRKIVLPHLGCVAVTPAQDADKFRMLLFMTRKLYSLVE 390
[102][TOP]
>UniRef100_UPI00015B5556 PREDICTED: similar to CG4033-PA, partial n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5556
Length = 1097
Score = 76.3 bits (186), Expect = 1e-12
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++LRCVRDD ++ L+Y+ +GSA++ F Y +P+ L+LK L N D+ IY +L
Sbjct: 179 ILLRCVRDDNTATNNSLHYVTDGSAKLMFTHRKVLYYVPLILMLKCLMNVSDKYIYNALT 238
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
G D V ++ V + L + EQC+ ++G+ F+ + +
Sbjct: 239 A------GCDDDVYYKNCVLN----MMRTVHEKDLHSHEQCKAYIGKMFRIKFYELPVNA 288
Query: 415 LSI-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVD 531
I V + +++ + +HLD+ DKF+LL F+ +KL++L D
Sbjct: 289 TDIEVCDFIIKYCIAIHLDDPADKFHLLCFMTKKLFALAD 328
[103][TOP]
>UniRef100_C5DNH9 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DNH9_LACTC
Length = 1197
Score = 76.3 bits (186), Expect = 1e-12
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR DQ+S T L+YL +G F EYL+PV ++LKAL
Sbjct: 220 RGASYSQYGIQIRSVRPDQTSQTNVLHYLNDGEVTFRFSWRKNEYLIPVVMILKALCELN 279
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGT----QLVRERAKIIL-DEVRDLG-LFTREQCRKHL 369
D EI+ DG +G+ + +R +++L + G L R Q ++L
Sbjct: 280 DREIF--------------DGIVGSDTSNSFLTDRLELLLRGHKKKYGELHNRRQVLQYL 325
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL-DNDHDKFNLLIFIIQKLYSLV 528
G F+ VL + V E +L+ + VHL D++ DK +L+F+I+KLYSLV
Sbjct: 326 GDKFRVVLQASPDATDFQVGEELLKRIVLVHLGDSNEDKSRMLLFMIRKLYSLV 379
[104][TOP]
>UniRef100_A9VCU6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9VCU6_MONBE
Length = 1136
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Frame = +1
Query: 46 SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE 225
S+ + +RCVR DQS+ TV ++Y +G+ +GF ++YL+P L+L+AL+ D +I+
Sbjct: 218 SYGVQMRCVRPDQSAQTVVVHYKNDGTCTLGFSYRKQQYLIPAILLLRALSGVSDRQIFM 277
Query: 226 SLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVK 405
+ RGD + + ER +I+L + LF+++ C +LG F+ +L+
Sbjct: 278 DI--------VRGD--MSNSFLVERVEIMLRQYTRERLFSQQACLAYLGNLFKVILNLHP 327
Query: 406 KESLSIVAEAVLRDYLFVHL-DNDHD-KFNLLIFIIQKLYSLVDQTSLP 546
+ S A + + L VH+ ND K+ +L+ +I+++YSL ++ P
Sbjct: 328 ETSDVEAAHILFKRVLLVHIAPNDFQAKYRVLVGLIRRVYSLAAGSTQP 376
[105][TOP]
>UniRef100_C5E449 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5E449_ZYGRC
Length = 1196
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ ++ F + +R VR DQ+S T L+YL +G F EYL+PV +++KAL +
Sbjct: 218 RGAAYSQFGVQIRSVRPDQTSQTNVLHYLHDGQVTFRFSWRKNEYLIPVVMIIKALCDIS 277
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQL----VRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG L + +R +++L + R L R Q ++L
Sbjct: 278 DREIF--------------DGIIGPDLSNSFLTDRLELLLRGFKKRYPQLRNRTQVLQYL 323
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL D + DK LL+F+I+KLYSLV
Sbjct: 324 GDKFRIVFQAPPDKSDLDVGKEVLHRIVLVHLNGDTNEDKCRLLLFMIRKLYSLV 378
[106][TOP]
>UniRef100_A7TIY2 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TIY2_VANPO
Length = 1204
Score = 75.1 bits (183), Expect = 3e-12
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ +S + + +R VR+DQ+S T L+YL +G F EYL+P ++LKAL ++
Sbjct: 225 RGASYTQYGIQIRSVRNDQTSQTNVLHYLNDGQVTFRFSWRKNEYLIPAVMILKALCDTS 284
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQL----VRERAKIILD--EVRDLGLFTREQCRKHL 369
D EI+ DG IG+ + + +R +++L + R L R Q +++
Sbjct: 285 DREIF--------------DGIIGSDIKNSFLTDRLELLLRGFKKRYPQLQNRTQVLQYI 330
Query: 370 GQHFQPVLDGVKKESLSIVAEAVLRDYLFVHL--DNDHDKFNLLIFIIQKLYSLV 528
G F+ V +S V + VL + VHL N+ DK +L+F+I+KLYSLV
Sbjct: 331 GDKFRVVFQASPDKSDYDVGQEVLNRIVLVHLGTGNNEDKSRMLMFMIRKLYSLV 385
[107][TOP]
>UniRef100_UPI000155D06F PREDICTED: similar to RNA polymerase I polypeptide B n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155D06F
Length = 1146
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/158 (27%), Positives = 83/158 (52%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + + CVRD+ +++ + L+YL NG+ V F + LP+G LKAL D +I++
Sbjct: 219 FGVSMHCVRDEHTAINMNLHYLENGTVMVNFIYQKELFFLPLGFALKALVGFSDHQIFQE 278
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L GR D + V + +++++E G T++Q +LG+ F+ L+ +
Sbjct: 279 L------IKGREDNSFYKNCVSQMLRMVMEE----GCTTQKQVLNYLGERFRIKLNLPEW 328
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
AE +L + +HL ++ +KF +L + +KL++
Sbjct: 329 YRNEQAAEFLLNQCICIHLKSNTEKFYMLCLMTRKLFA 366
[108][TOP]
>UniRef100_UPI00005E7539 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica
RepID=UPI00005E7539
Length = 1135
Score = 74.3 bits (181), Expect = 5e-12
Identities = 44/158 (27%), Positives = 82/158 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVRD+ +++ + L+YL NGS V F + LP+G VLKAL D +I++ L
Sbjct: 212 MHCVRDEHTAINMNLHYLENGSVMVNFIYHKELFFLPLGFVLKALVAFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
GR + + V + +++++E G T++Q +LG+ F+ L +
Sbjct: 269 ---IKGREENSFFRNCVSQMLRVVMEE----GCITQKQVLNYLGERFRVKLSLPDWYTNV 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
AE +L + +HL ++ +KF +L + +KL++ +
Sbjct: 322 QAAEFLLNQCVCIHLKSNEEKFYVLCLMTRKLFTFAKE 359
[109][TOP]
>UniRef100_UPI00016E11D5 UPI00016E11D5 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11D5
Length = 953
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/160 (26%), Positives = 83/160 (51%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCV+DD +++ + L+YL NG+ + F + LP+G LKAL + D IY+ L
Sbjct: 210 MAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFSDFHIYQEL- 268
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
GR D + + V E +++++E G T+ + LG+ F+ ++ + +
Sbjct: 269 -----VKGREDNSFYKKCVTEMLRLVMEE----GCITQSKVLNFLGERFRVKMNLPEWYT 319
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L + + +HL + +KF +L + +KL++ Q
Sbjct: 320 NEQCAHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQ 359
[110][TOP]
>UniRef100_UPI00016E11AD UPI00016E11AD related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AD
Length = 1132
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/160 (26%), Positives = 83/160 (51%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCV+DD +++ + L+YL NG+ + F + LP+G LKAL + D IY+ L
Sbjct: 210 MAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFSDFHIYQEL- 268
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
GR D + + V E +++++E G T+ + LG+ F+ ++ + +
Sbjct: 269 -----VKGREDNSFYKKCVTEMLRLVMEE----GCITQSKVLNFLGERFRVKMNLPEWYT 319
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L + + +HL + +KF +L + +KL++ Q
Sbjct: 320 NEQCAHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQ 359
[111][TOP]
>UniRef100_UPI00016E11AC UPI00016E11AC related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11AC
Length = 1134
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/160 (26%), Positives = 83/160 (51%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCV+DD +++ + L+YL NG+ + F + LP+G LKAL + D IY+ L
Sbjct: 210 MAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFSDFHIYQEL- 268
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
GR D + + V E +++++E G T+ + LG+ F+ ++ + +
Sbjct: 269 -----VKGREDNSFYKKCVTEMLRLVMEE----GCITQSKVLNFLGERFRVKMNLPEWYT 319
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L + + +HL + +KF +L + +KL++ Q
Sbjct: 320 NEQCAHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQ 359
[112][TOP]
>UniRef100_UPI0001926601 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001926601
Length = 1371
Score = 72.0 bits (175), Expect = 3e-11
Identities = 47/161 (29%), Positives = 86/161 (53%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R ++ DQS L+YL +GS + F ++ +P+ L+LKALT + D+ IY+
Sbjct: 203 FGVSIRSIQKDQSGNINVLHYLTDGSFTLSFIHQKEQFFVPLALILKALTANSDQYIYKQ 262
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L +G+ D +V + + DE L ++ K++G F+ ++ +
Sbjct: 263 L------LHGKEDDIFFKDVVVNMLRTLNDE----NLLSQNDVLKYMGMRFRIKVNLPEW 312
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVD 531
S +A+ + + + VHL+ DKFNLLI++ QKL++L +
Sbjct: 313 TSDEDIAKYMFQTCVLVHLEKITDKFNLLIYMTQKLFALAN 353
[113][TOP]
>UniRef100_Q6P9Q2 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q6P9Q2_MOUSE
Length = 1135
Score = 72.0 bits (175), Expect = 3e-11
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + +RCVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSMRCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G +++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFRNSVSQMLRIVIEE----GCHSQKQVLN 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L AE +L + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGECFRVKLSLPDWYPNVEAAEFLLNQCICIHLQSNTDKFYLLCLMTRKLFAL 356
[114][TOP]
>UniRef100_Q3UMX7 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q3UMX7_MOUSE
Length = 1135
Score = 72.0 bits (175), Expect = 3e-11
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + +RCVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSMRCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G +++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFRNSVSQMLRIVIEE----GCHSQKQVLN 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L AE +L + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGECFRVKLSLPDWYPNVEAAEFLLNQCICIHLQSNTDKFYLLCLMTRKLFAL 356
[115][TOP]
>UniRef100_A2AP84 RNA polymerase 1-2 n=1 Tax=Mus musculus RepID=A2AP84_MOUSE
Length = 754
Score = 72.0 bits (175), Expect = 3e-11
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + +RCVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSMRCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G +++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFRNSVSQMLRIVIEE----GCHSQKQVLN 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L AE +L + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGECFRVKLSLPDWYPNVEAAEFLLNQCICIHLQSNTDKFYLLCLMTRKLFAL 356
[116][TOP]
>UniRef100_UPI0001B7B29C DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA
polymerase I subunit 2) (RPA135) (A127). n=1 Tax=Rattus
norvegicus RepID=UPI0001B7B29C
Length = 1134
Score = 71.6 bits (174), Expect = 3e-11
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + + CVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSIHCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G T++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFKNSVSQMLRIVMEE----GCHTQKQVLD 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L + AE + + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGERFRVKLSLPDWYPNAEAAEFLFNQCICIHLKSNTDKFYLLCLMTRKLFAL 356
[117][TOP]
>UniRef100_UPI000154DCB5 UPI000154DCB5 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI000154DCB5
Length = 1135
Score = 71.6 bits (174), Expect = 3e-11
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + + CVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSIHCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G T++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFKNSVSQMLRIVMEE----GCHTQKQVLD 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L + AE + + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGERFRVKLSLPDWYPNAEAAEFLFNQCICIHLKSNTDKFYLLCLMTRKLFAL 356
[118][TOP]
>UniRef100_O54888 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Rattus
norvegicus RepID=RPA2_RAT
Length = 1135
Score = 71.6 bits (174), Expect = 3e-11
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + + CVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSIHCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G T++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFKNSVSQMLRIVMEE----GCHTQKQVLD 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L + AE + + +HL ++ DKF LL + +KL++L
Sbjct: 303 YLGERFRVKLSLPDWYPNAEAAEFLFNQCICIHLKSNTDKFYLLCLMTRKLFAL 356
[119][TOP]
>UniRef100_Q8LNU6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q8LNU6_ORYSJ
Length = 855
Score = 71.2 bits (173), Expect = 5e-11
Identities = 31/41 (75%), Positives = 39/41 (95%)
Frame = +1
Query: 424 VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
VAEAVL+DY+FVHL N+HDKFNLLIF++QKLY++VDQT+ P
Sbjct: 1 VAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASP 41
[120][TOP]
>UniRef100_C4V829 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V829_NOSCE
Length = 1054
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/165 (28%), Positives = 82/165 (49%)
Frame = +1
Query: 52 FLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESL 231
++ +R V DD+ L+Y +G F+ E+ +P+ ++LKAL N+ D+EIY+ L
Sbjct: 170 YIYIRSVGDDELGHVGYLHYSIDGDVFYRFFRRRNEFHIPIIIILKALVNTTDQEIYKML 229
Query: 232 NCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKE 411
N ++ Y + L + +F+R +C +++G F+ ++ E
Sbjct: 230 N---NDIY---------------ITVALKKATKEEVFSRAECIEYIGARFKQSMNASTNE 271
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
I +L Y+ HL + DKFN LI+ I+KL+SLV +P
Sbjct: 272 EACI---EILDTYVCPHLTKNQDKFNFLIYSIKKLFSLVKGEIIP 313
[121][TOP]
>UniRef100_UPI0000E1F637 PREDICTED: RNA polymerase I polypeptide B isoform 6 n=3 Tax=Pan
troglodytes RepID=UPI0000E1F637
Length = 1070
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 147 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 203
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 204 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 256
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 257 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 291
[122][TOP]
>UniRef100_UPI0000E1F636 PREDICTED: RNA polymerase I polypeptide B isoform 2 n=1 Tax=Pan
troglodytes RepID=UPI0000E1F636
Length = 952
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[123][TOP]
>UniRef100_UPI0000E1F635 PREDICTED: hypothetical protein isoform 5 n=1 Tax=Pan troglodytes
RepID=UPI0000E1F635
Length = 1079
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 156 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 212
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 213 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 265
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 266 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 300
[124][TOP]
>UniRef100_UPI0000E1F634 PREDICTED: RNA polymerase I polypeptide B isoform 1 n=1 Tax=Pan
troglodytes RepID=UPI0000E1F634
Length = 1098
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[125][TOP]
>UniRef100_UPI0000E1F633 PREDICTED: RNA polymerase I polypeptide B isoform 9 n=1 Tax=Pan
troglodytes RepID=UPI0000E1F633
Length = 1135
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[126][TOP]
>UniRef100_UPI0000DB71A2 PREDICTED: similar to RNA polymerase I 135kD subunit CG4033-PA n=1
Tax=Apis mellifera RepID=UPI0000DB71A2
Length = 1121
Score = 70.5 bits (171), Expect = 8e-11
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
L LR VRDD ++ L+Y+ +GSA++ F Y +P+ L+LK L + D IY L
Sbjct: 202 LFLRSVRDDNTTANNTLHYVTDGSAKLMFSHKKVLYYVPLILILKCLVDVSDIFIYNVLT 261
Query: 235 --CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
C Y +Y G I L RA V + GL E+C+ ++G+ F+ + +
Sbjct: 262 AGCEYDLYY---KGCILNML---RA------VHEQGLNNHEECKAYIGKMFRIKFFELPE 309
Query: 409 ESLSI-VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVD 531
++ I V + +++ + +HL+N DKF LL F+ +KL++L +
Sbjct: 310 DATDIDVCDFIIKHCIAIHLNNPLDKFYLLAFMTKKLFALAN 351
[127][TOP]
>UniRef100_UPI000179E6BD DNA-directed RNA polymerase I-like protein n=1 Tax=Bos taurus
RepID=UPI000179E6BD
Length = 1136
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L
Sbjct: 269 ---IKGKEDDSFFRNSVSQMLRIVMEE----GCSTQKQVLNYLGERFRVKLSLPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[128][TOP]
>UniRef100_Q5RB08 DNA-directed RNA polymerase n=1 Tax=Pongo abelii RepID=Q5RB08_PONAB
Length = 1135
Score = 70.5 bits (171), Expect = 8e-11
Identities = 44/159 (27%), Positives = 83/159 (52%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + + CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++
Sbjct: 208 FGVSMHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQE 267
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 268 L------IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDW 317
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 318 YPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[129][TOP]
>UniRef100_A6QLS0 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A6QLS0_BOVIN
Length = 1135
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L
Sbjct: 269 ---IKGKEDDSFFRNSVSQMLRIVMEE----GCSTQKQVLNYLGERFRVKLSLPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[130][TOP]
>UniRef100_Q2TAM4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=Q2TAM4_HUMAN
Length = 952
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[131][TOP]
>UniRef100_B7Z6Y7 cDNA FLJ53412, highly similar to DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B7Z6Y7_HUMAN
Length = 924
Score = 70.5 bits (171), Expect = 8e-11
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 1 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 57
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 58 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCLTQKQVLNYLGECFRVKLNVPDWYPNE 110
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 111 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 145
[132][TOP]
>UniRef100_UPI0001819D78 polymerase (RNA) I polypeptide B, 128kDa n=1 Tax=Pongo abelii
RepID=UPI0001819D78
Length = 1135
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[133][TOP]
>UniRef100_UPI00018817D1 UPI00018817D1 related cluster n=1 Tax=Homo sapiens
RepID=UPI00018817D1
Length = 952
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[134][TOP]
>UniRef100_B7Z823 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z823_HUMAN
Length = 1173
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 250 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 306
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 307 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 359
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 360 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 394
[135][TOP]
>UniRef100_Q5REE8 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Pongo abelii
RepID=RPA2_PONAB
Length = 1136
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[136][TOP]
>UniRef100_B7Z1W6 DNA-directed RNA polymerase n=2 Tax=Homo sapiens RepID=B7Z1W6_HUMAN
Length = 996
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 73 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 129
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 130 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 182
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 183 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 217
[137][TOP]
>UniRef100_Q9H9Y6 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Homo sapiens
RepID=RPA2_HUMAN
Length = 1135
Score = 69.7 bits (169), Expect = 1e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[138][TOP]
>UniRef100_UPI000155F834 PREDICTED: similar to RNA polymerase I polypeptide B isoform 2 n=1
Tax=Equus caballus RepID=UPI000155F834
Length = 952
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFVYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+ +E G T++Q +LG+ F+ L+ +
Sbjct: 269 ---IKGKEDDSFFRNSVSQMLRIVTEE----GCSTQKQVLNYLGERFRVKLNLPDWYPDA 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFAL 356
[139][TOP]
>UniRef100_UPI000155F832 PREDICTED: similar to RNA polymerase I polypeptide B isoform 1 n=1
Tax=Equus caballus RepID=UPI000155F832
Length = 1135
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/155 (27%), Positives = 81/155 (52%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFVYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+ +E G T++Q +LG+ F+ L+ +
Sbjct: 269 ---IKGKEDDSFFRNSVSQMLRIVTEE----GCSTQKQVLNYLGERFRVKLNLPDWYPDA 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFAL 356
[140][TOP]
>UniRef100_P70700 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Mus musculus
RepID=RPA2_MOUSE
Length = 1135
Score = 69.3 bits (168), Expect = 2e-10
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = +1
Query: 10 KWQ*ILKSSSCG--SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 183
KW KS G F + +RCVR++ S+V + L+Y+ NG+ + F + LP+G
Sbjct: 197 KW----KSRGLGYTQFGVSMRCVREEHSAVNMNLHYVENGTVMLNFIYRKELFFLPLGFA 252
Query: 184 LKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRK 363
LKAL + D +I++ L G+ + + V + +I+++E G +++Q
Sbjct: 253 LKALVSFSDYQIFQEL------IKGKEEDSFFRNSVSQMLRIVIEE----GCHSQKQVLN 302
Query: 364 HLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+LG+ F+ L AE +L + +HL ++ DKF L + +KL++L
Sbjct: 303 YLGECFRVKLSLPDWYPNVEAAEFLLNQGICIHLQSNTDKFYLRCLMTRKLFAL 356
[141][TOP]
>UniRef100_B8CA95 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CA95_THAPS
Length = 1069
Score = 68.9 bits (167), Expect = 2e-10
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Frame = +1
Query: 61 LRCVRD--DQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNS---------C 207
+RC R D S++T L+YL G A + F +E+LLP+ LV++AL+
Sbjct: 85 IRCQRHNGDMSTITNTLHYLTTGGATLKFVARKQEFLLPLVLVMRALSGGDGSTRGHGIT 144
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDL-GLFTREQCRKHLGQHFQ 384
DEE+Y + G VR RA+++L E + G+ T E+C +G F+
Sbjct: 145 DEELYNRIV----------QGDESNTFVRARAELLLREAKQFNGMQTPEECLAFVGSRFR 194
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
+ S + ++ Y+ +HL + DK +F+++KLYS
Sbjct: 195 LMSMKANSTSDVEIGHYIINRYILIHLPSYGDKLEYTLFMLRKLYS 240
[142][TOP]
>UniRef100_UPI000187DD6D hypothetical protein MPER_06071 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187DD6D
Length = 323
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/125 (32%), Positives = 69/125 (55%)
Frame = +1
Query: 154 REYLLPVGLVLKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDL 333
+EY++P+ L LKAL N+ D EI+E + + Y + R +++L
Sbjct: 9 QEYVIPIMLFLKALVNASDREIFEGI---MMQDYDN-------TFLSGRVELLLRSFTVF 58
Query: 334 GLFTREQCRKHLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQK 513
+ T +QC ++LG F+ VL + + V +L+ + VHL+N DK+ +L+F+++K
Sbjct: 59 TMRTGDQCLEYLGDKFRVVLGVPGDWTNAAVGAYLLQKLVLVHLENPRDKYRMLLFMLRK 118
Query: 514 LYSLV 528
LYSLV
Sbjct: 119 LYSLV 123
[143][TOP]
>UniRef100_UPI0000ECC7B6 DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA
polymerase I subunit 2) (DNA-directed RNA polymerase I
135 kDa polypeptide) (RPA135). n=2 Tax=Gallus gallus
RepID=UPI0000ECC7B6
Length = 1016
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/154 (27%), Positives = 77/154 (50%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++ CV+D+ S++ + L+YL NG V F + LP+G LKAL N D +I+E L
Sbjct: 95 VVMHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLPLGFALKALVNFTDYQIFEEL- 153
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+ + V E +L V + G +T++ ++LG+ F+ L+ + S
Sbjct: 154 -----VKDKKNDTFYVNCVTE----MLRAVAEAGCYTQQNVLEYLGKSFRVKLNLPEWYS 204
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKL 516
A+ + + +HL + +KF LL + +KL
Sbjct: 205 NEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKL 238
[144][TOP]
>UniRef100_UPI0000D9D5B2 PREDICTED: polymerase (RNA) I polypeptide B, 128kDa isoform 1 n=1
Tax=Macaca mulatta RepID=UPI0000D9D5B2
Length = 952
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGGCFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[145][TOP]
>UniRef100_UPI0000D9D5B1 PREDICTED: RNA polymerase I polypeptide B isoform 2 n=1 Tax=Macaca
mulatta RepID=UPI0000D9D5B1
Length = 1079
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 156 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 212
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG F+ L+
Sbjct: 213 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGGCFRVKLNVPDWYPNE 265
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 266 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 300
[146][TOP]
>UniRef100_UPI0000D9D5B0 PREDICTED: polymerase (RNA) I polypeptide B, 128kDa isoform 3 n=1
Tax=Macaca mulatta RepID=UPI0000D9D5B0
Length = 1135
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/155 (27%), Positives = 80/155 (51%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GCSTQKQVLNYLGGCFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 322 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 356
[147][TOP]
>UniRef100_UPI0000ECC7B5 DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA
polymerase I subunit 2) (DNA-directed RNA polymerase I
135 kDa polypeptide) (RPA135). n=1 Tax=Gallus gallus
RepID=UPI0000ECC7B5
Length = 760
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/154 (27%), Positives = 77/154 (50%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++ CV+D+ S++ + L+YL NG V F + LP+G LKAL N D +I+E L
Sbjct: 98 VVMHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLPLGFALKALVNFTDYQIFEEL- 156
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
+ + V E +L V + G +T++ ++LG+ F+ L+ + S
Sbjct: 157 -----VKDKKNDTFYVNCVTE----MLRAVAEAGCYTQQNVLEYLGKSFRVKLNLPEWYS 207
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKL 516
A+ + + +HL + +KF LL + +KL
Sbjct: 208 NEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKL 241
[148][TOP]
>UniRef100_UPI000186CB0F DNA-directed RNA polymerase I 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186CB0F
Length = 1114
Score = 67.4 bits (163), Expect = 7e-10
Identities = 45/159 (28%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++LRCV +D++S L+++ +G+ +V Y +P+ L+LK+L N D +++ L
Sbjct: 213 ILLRCVSEDETSTNNVLHFVTDGTVKVMLSYGRSLYFIPLCLILKSLINVSDLYVFKRLT 272
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVL-DGVKKE 411
GR D + K +L +V G+ T E+ + +G+ F+ D
Sbjct: 273 ------EGRDDDFYFKSCI----KTMLYDVHVQGIDTHEEAKCFIGKTFRLKFPDQSPWF 322
Query: 412 SLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ + + + ++ L +HL+++ DKFNLLIF+ QKL++ V
Sbjct: 323 TDAQICDLIMEKCLAIHLNDNKDKFNLLIFMTQKLFAFV 361
[149][TOP]
>UniRef100_UPI0000EB2940 DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA
polymerase I subunit 2) (DNA-directed RNA polymerase I
135 kDa polypeptide) (RPA135). n=1 Tax=Canis lupus
familiaris RepID=UPI0000EB2940
Length = 1134
Score = 67.4 bits (163), Expect = 7e-10
Identities = 42/155 (27%), Positives = 78/155 (50%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I S
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIXRS---- 267
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ + + V + +I+++E G T++Q +LG+ F+ L
Sbjct: 268 ---SQGKEEDSFFRNSVSQMLRIVMEE----GCSTQKQVLNYLGERFRVKLSLPDWYPNE 320
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
AE + + +HL ++ +KF +L + +KL++L
Sbjct: 321 QAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFAL 355
[150][TOP]
>UniRef100_UPI000180C381 PREDICTED: similar to RNA polymerase I polypeptide B n=1 Tax=Ciona
intestinalis RepID=UPI000180C381
Length = 1144
Score = 67.0 bits (162), Expect = 9e-10
Identities = 44/166 (26%), Positives = 86/166 (51%)
Frame = +1
Query: 49 FFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 228
F + +R + +DQ++ L+YL NG+ + + + LP+ L+LKAL D +IY+
Sbjct: 211 FGVSVRSMTEDQTTAPFVLHYLSNGTVTICVYHRKEMFFLPLVLILKALVPFSDRDIYKE 270
Query: 229 LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 408
L + D T V+ +L + + LF ++ ++LG+ F+ L+
Sbjct: 271 LIKT------KEDDTYFTCCVQN----MLRQAQAYNLFEQKDFLRYLGEKFRIKLNRASW 320
Query: 409 ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP 546
S + +A +L+ ++ +HLD++ DKF L+ F+ +K++ L +P
Sbjct: 321 YSDTDIAHFMLKHHVLIHLDSNEDKFRLISFMTRKVFDLALGKCMP 366
[151][TOP]
>UniRef100_A7SSE2 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SSE2_NEMVE
Length = 913
Score = 67.0 bits (162), Expect = 9e-10
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Frame = +1
Query: 43 GSFF----LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCD 210
GSF+ + +R V+ DQS+V + L+YL +G+ + Y +PV +LKAL N D
Sbjct: 158 GSFYTEYGVQMRSVKGDQSAVNMTLHYLNDGNVMMCIAYRKELYYVPVVFILKALMNVTD 217
Query: 211 EEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPV 390
+ IY L + ++ ++L ++ G ++ +++G F+
Sbjct: 218 QHIYRELIKAEENN----------TFWKDCVAMMLRTAQEEGAVNQKSVLEYIGLRFRVK 267
Query: 391 LDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+ S VA+ +++ + +HLD + DKFNLLI + +KLY+L
Sbjct: 268 MRLPDWFSDEAVAQYLIQQCICIHLDTNADKFNLLILMTRKLYAL 312
[152][TOP]
>UniRef100_Q6PCJ2 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis
RepID=Q6PCJ2_XENLA
Length = 1134
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/154 (25%), Positives = 78/154 (50%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCV+D+ ++V + L+YL NGS V F + +P+G LKAL D +I+ L
Sbjct: 212 IRCVQDEHTAVNMNLHYLENGSVMVNFIYQKELFFIPLGFALKALVEFSDYQIFTEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + + + +++++E G ++ K+LG+ F+ + +
Sbjct: 269 ---IKGKEDNSFYRDCMTQMLRVVVEE----GCHNQKNVLKYLGERFRVKFYLPEWYTDE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
AE ++ + +HL + +KF +L + QKL++
Sbjct: 322 QAAEFLISHCICIHLKTNVEKFYMLCMMTQKLFT 355
[153][TOP]
>UniRef100_Q4TBC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4TBC6_TETNG
Length = 1071
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/158 (27%), Positives = 75/158 (47%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCV++D ++V + L+YL NG+ + F + LP+G LKAL + D +IY+ L
Sbjct: 137 MRCVKEDHTAVNMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFTDFQIYQEL--- 193
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
GR D + F + Q LG+ F+ ++ + +
Sbjct: 194 ---IKGREDNS----------------------FYKNQVLSFLGERFRVKMNLPEWYTHQ 228
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L D + +HL +D +KFNLL + +KL++ Q
Sbjct: 229 QCATILLEDCICIHLKSDAEKFNLLCLMTRKLFTFAKQ 266
[154][TOP]
>UniRef100_UPI00004D7E4D DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA
polymerase I subunit 2) (DNA-directed RNA polymerase I
135 kDa polypeptide) (RPA135). n=1 Tax=Xenopus
(Silurana) tropicalis RepID=UPI00004D7E4D
Length = 1135
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/154 (26%), Positives = 78/154 (50%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
LRCVRD+ ++V + L+YL NGS V F + +P+G LKAL + D +I+ L
Sbjct: 212 LRCVRDEHTAVNMNLHYLENGSVMVNFIYQKELFFIPLGFALKALVDYSDYQIFTEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ + + + + + +++E G +++ K+LG+ F+ +
Sbjct: 269 ---IKGKEENSFYRDCMTQMLRAVVEE----GCHSQKNVLKYLGERFRVKFYLPDWFTDE 321
Query: 421 IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
AE ++ + +HL + +KF +L + QKL++
Sbjct: 322 QAAEFLISQCICIHLKTNVEKFYMLCMMTQKLFT 355
[155][TOP]
>UniRef100_A2EN74 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2EN74_TRIVA
Length = 1104
Score = 64.3 bits (155), Expect = 6e-09
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 46 SFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE 225
+F R + D SS+T ++Y G+ V I R + +P+ ++L+AL D IYE
Sbjct: 183 NFATSFRSMAPDCSSITTNVHYQNTGNMVVLIPIQRRMFFVPLPILLRALVEVDDRTIYE 242
Query: 226 SLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVK 405
S+ C + D I T L +L + TR R LG HF+ VL +
Sbjct: 243 SI-CGQNPDSFYSDRVIAT----------LRYASELDIHTRAGARDFLGAHFRTVLQCPR 291
Query: 406 KESLSIVAEAVLRDYLFVHLDND--HDKFNLLIFIIQKLYSLVDQTSLP 546
+ E +L+ LF HL ++ KF+LLI++ ++L LV LP
Sbjct: 292 HFTNEECCEVLLKRNLFPHLSDEAPSKKFDLLIYMTRRLLQLVKGEILP 340
[156][TOP]
>UniRef100_Q98S72 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
RepID=Q98S72_GUITH
Length = 1109
Score = 63.2 bits (152), Expect = 1e-08
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 25 LKSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNS 204
L+ + SF +RCV S T L+YL NGS F I +E+ PV ++LKA+ +
Sbjct: 172 LRGKNFSSFACSIRCVNRYGLSRTFHLHYLTNGSILCRFIIRNQEFFFPVVIILKAIKDV 231
Query: 205 CDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 384
D EI++ + ++ + AI K+I D + R+ +++G+ F+
Sbjct: 232 SDTEIFKDITNNLHDNNMFKEVAI---------KLISDSYNYIKSNFRDNYLEYIGKLFK 282
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDND-HDKFNLLIFIIQKL 516
+ +L + ++ + LF+H++ND + K+ LLI++IQKL
Sbjct: 283 IFEKKIHLNNLE-TGKNLIENNLFIHVENDMNQKYLLLIYMIQKL 326
[157][TOP]
>UniRef100_B7FQD9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQD9_PHATR
Length = 1147
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = +1
Query: 61 LRCVRD--DQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNS-CDEEIYESL 231
+RC R D S++T ++YL G A + F +E+L+P L+L+AL+ S E+YE +
Sbjct: 183 MRCARHNGDMSAITNTVHYLTTGGANLKFVAKKQEFLIPAILILRALSGSESQTELYERI 242
Query: 232 NCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDL--GLFTREQCRKHLGQHFQPVLDGVK 405
+GD + T LV RA ++L + R L T ++C +G F+ + +
Sbjct: 243 --------VQGDQS-NTFLV-ARAGLLLQDARARFGSLNTPDECLAFIGTRFRRLSQKAE 292
Query: 406 KESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYS 522
S + ++R ++ +HL DK L+ +++KLY+
Sbjct: 293 TTSDVEIGHHIIRRFVLIHLPTYRDKLECLLLMLRKLYA 331
[158][TOP]
>UniRef100_C9SLU9 DNA-directed RNA polymerase I subunit RPA2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SLU9_9PEZI
Length = 1208
Score = 62.0 bits (149), Expect = 3e-08
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Frame = +1
Query: 172 VGLVLKALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTRE 351
V ++LKAL + D EI+E L +G + + +R +++L GL+T+
Sbjct: 241 VMMILKALVETNDREIFEGLIG------SKGSKSAQNTFLTDRVELLLRTYTSYGLYTKT 294
Query: 352 QCRKHLGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDN-------DHDKFNLLIFIIQ 510
+ R +LG+ F+ VL S V L+ + VHL N D DKF +L+F+I+
Sbjct: 295 ETRAYLGEKFRVVLGVPDTMSHYDVGTEFLKRIVLVHLGNVDVTEQQDSDKFKMLLFMIR 354
Query: 511 KLYSLV 528
KLY+LV
Sbjct: 355 KLYALV 360
[159][TOP]
>UniRef100_Q8IHJ3 Putative RNA polymerase B n=1 Tax=Brugia malayi RepID=Q8IHJ3_BRUMA
Length = 453
Score = 60.5 bits (145), Expect = 8e-08
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE-SL 231
+++RCVR + S+V + L+YL +G+ + + LP V+K+LT+ D+ I E +
Sbjct: 181 MMIRCVRGNYSAVMMTLHYLESGTIVIALQYRRELFYLPFMYVIKSLTSMNDQCIMEHMI 240
Query: 232 NCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ-PVLDGVKK 408
C +H+ +G +L D G+ ++ +G F+ D V
Sbjct: 241 RCRPGDHFWKG-----------CVTAMLALCNDDGVVNQKTALTAIGARFRVATQDRVGP 289
Query: 409 ESLS-IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+S V +LR + +HLDND DKF LL ++ QKL +L
Sbjct: 290 WEISEDVGRFLLRVCVAIHLDNDEDKFFLLSYMAQKLIAL 329
[160][TOP]
>UniRef100_A8PJT7 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
RepID=A8PJT7_BRUMA
Length = 1108
Score = 60.5 bits (145), Expect = 8e-08
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYE-SL 231
+++RCVR + S+V + L+YL +G+ + + LP V+K+LT+ D+ I E +
Sbjct: 181 MMIRCVRGNYSAVMMTLHYLESGTIVIALQYRRELFYLPFMYVIKSLTSMNDQCIMEHMI 240
Query: 232 NCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ-PVLDGVKK 408
C +H+ +G +L D G+ ++ +G F+ D V
Sbjct: 241 RCRPGDHFWKG-----------CVTAMLALCNDDGVVNQKTALTAIGARFRVATQDRVGP 289
Query: 409 ESLS-IVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSL 525
+S V +LR + +HLDND DKF LL ++ QKL +L
Sbjct: 290 WEISEDVGRFLLRVCVAIHLDNDEDKFFLLSYMAQKLIAL 329
[161][TOP]
>UniRef100_A9BKT9 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BKT9_9CRYP
Length = 1129
Score = 58.2 bits (139), Expect = 4e-07
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Frame = +1
Query: 28 KSSSCGSFFLILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSC 207
+ + C + R V Q+S T+ L+YL NGS + +E+ +PV +++K+L
Sbjct: 178 RGNLCTTLSCSFRSVDRLQTSRTLHLHYLTNGSIHARIIVQKKEFFIPVIMLIKSLMPIS 237
Query: 208 DEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRD-LGLFTREQCRKHLGQHFQ 384
D++I+ESL +S+ + R R ++ + + L T+ + LG+ F+
Sbjct: 238 DKKIFESLTKTFSK----------DKFYRIRIMAMIKDAHETCDLKTQISVLEFLGKVFK 287
Query: 385 PVLDGVKKESLSIVAEAVLRDYLFVHLDNDHD-KFNLLIFIIQKLYSLVDQTSL 543
L ++ SI E L +++ +HL D + K LL+F+I KL S+ + S+
Sbjct: 288 TSLQTNTIDAKSI-GEKFLFNHILIHLGEDKEAKVKLLLFMINKLLSVQKKISI 340
[162][TOP]
>UniRef100_UPI00016E11D6 UPI00016E11D6 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E11D6
Length = 1072
Score = 57.8 bits (138), Expect = 5e-07
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+ +RCV+DD +++ + L+YL NG+ + F + LP+G LKAL + D IY+ L
Sbjct: 135 MAMRCVKDDHTAINMTLHYLDNGTVMLNFIYQKELFFLPLGFALKALVDFSDFHIYQEL- 193
Query: 235 CCYSEHYGRGDGAIGTQLV------RERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLD 396
GR D + V R R K+ L E +T EQC
Sbjct: 194 -----VKGREDNSFYKSKVLNFLGERFRVKMNLPE-----WYTNEQC------------- 230
Query: 397 GVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQ 534
A +L + + +HL + +KF +L + +KL++ Q
Sbjct: 231 ----------AHILLDECVCIHLKTNVEKFYMLCLMTRKLFTFAKQ 266
[163][TOP]
>UniRef100_Q9NVC2 cDNA FLJ10816 fis, clone NT2RP4000997, highly similar to
DNA-DIRECTED RNA POLYMERASE I 135 KD POLYPEPTIDE (EC
2.7.7.6) n=1 Tax=Homo sapiens RepID=Q9NVC2_HUMAN
Length = 336
Score = 57.4 bits (137), Expect = 7e-07
Identities = 37/135 (27%), Positives = 67/135 (49%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+ CVR++ S+V + L+YL NG+ + F + LP+G LKAL + D +I++ L
Sbjct: 212 MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQEL--- 268
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLS 420
G+ D + V + +I+++E G T++Q +LG+ F+ L+
Sbjct: 269 ---IKGKEDDSFLRNSVSQMLRIVMEE----GWLTQKQVLNYLGECFRVKLNVPDWYPNE 321
Query: 421 IVAEAVLRDYLFVHL 465
AE + + +HL
Sbjct: 322 QAAEFLFNQCICIHL 336
[164][TOP]
>UniRef100_C4Q6P1 DNA-directed RNA polymerase I subunit, putative n=1 Tax=Schistosoma
mansoni RepID=C4Q6P1_SCHMA
Length = 1155
Score = 57.0 bits (136), Expect = 9e-07
Identities = 37/158 (23%), Positives = 80/158 (50%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
+++RCVR+D++ + L++L NG + F + ++L+P+ ++L+ S +
Sbjct: 173 IVMRCVREDETVSILMLHWLVNGEPALAFIVEREQFLVPISIILRVSFKSLYKTFGNVRT 232
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKES 414
C S + + A IL ++D ++ + +LG F+ ++ + S
Sbjct: 233 CNIS--------FLFLKFHIRNAMRILIRLKDDEYSSQTRALCYLGGLFRKRMNVPDRLS 284
Query: 415 LSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLV 528
+ +L +Y+ +HL + DK++LL F+I+KL++ V
Sbjct: 285 DEEAGKFLLSEYIAIHLSSFLDKYHLLCFMIKKLHAFV 322
[165][TOP]
>UniRef100_B4G8A6 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4G8A6_DROPE
Length = 1127
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Frame = +1
Query: 55 LILRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLN 234
++++ VRDD+ S + L+YL NG+AR F + R +PV L+LK L + DEEIY L
Sbjct: 206 IMVQTVRDDECSFSNVLHYLNNGTARFMFSHIKRLSYVPVCLILKCLMDYTDEEIYNRLV 265
Query: 235 CCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCR 360
Y + Q + +L +V + G++T QCR
Sbjct: 266 QGYEK----------DQYYVSSVQTMLRDVHNEGVYTHAQCR 297
[166][TOP]
>UniRef100_UPI00018639F2 hypothetical protein BRAFLDRAFT_81001 n=1 Tax=Branchiostoma
floridae RepID=UPI00018639F2
Length = 1032
Score = 53.9 bits (128), Expect = 7e-06
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +1
Query: 61 LRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESLNCC 240
+RCV DQ++ T+ L+YL NG+ + F ++ +P+ ++LKAL + D+ IY L
Sbjct: 165 MRCVTKDQTAATIVLHYLTNGTVTLCFVYKKEQFFVPLIIILKALVETTDQHIYSEL--- 221
Query: 241 YSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ---PVLDGVKKE 411
G+ D + V +L + ++ GL T+ K++G+ F+ PV D E
Sbjct: 222 ---IKGKEDNSFFKGCVAS----MLRQAQNEGLMTQAGILKYIGERFRVKLPVPDWYTDE 274
Query: 412 SLSIVAEAVLRDYLF 456
+ ++ LF
Sbjct: 275 EVGQFLLRLMTQKLF 289