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[1][TOP] >UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana RepID=Q8L7S8-2 Length = 747 Score = 270 bits (690), Expect = 4e-71 Identities = 138/138 (100%), Positives = 138/138 (100%) Frame = +3 Query: 87 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 266 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60 Query: 267 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 446 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120 Query: 447 GITHLFPIQRAVLVPALQ 500 GITHLFPIQRAVLVPALQ Sbjct: 121 GITHLFPIQRAVLVPALQ 138 [2][TOP] >UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana RepID=RH3_ARATH Length = 748 Score = 270 bits (690), Expect = 4e-71 Identities = 138/138 (100%), Positives = 138/138 (100%) Frame = +3 Query: 87 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 266 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60 Query: 267 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 446 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120 Query: 447 GITHLFPIQRAVLVPALQ 500 GITHLFPIQRAVLVPALQ Sbjct: 121 GITHLFPIQRAVLVPALQ 138 [3][TOP] >UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RFT3_RICCO Length = 772 Score = 120 bits (301), Expect = 5e-26 Identities = 82/158 (51%), Positives = 99/158 (62%), Gaps = 21/158 (13%) Frame = +3 Query: 90 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSL-SLDKPFFTPLSLV------RRTRRIHSS 248 +S +GV S++ P +E+S + K S LS+ + DKP F L L + H Sbjct: 4 SSVLGVSSIFHTPSVELS--SRKTNSTTLSIPTTDKPHFNSLVLQSCSLYNNKHGHGHGH 61 Query: 249 SLLVPSAVATPNSVLSEEAFKSLG--LSDHDEYDLDGDNNNVEA----DDG--------E 386 S V SA+A PNS+LSEEAFK LG LSD DE D DN++V + DDG + Sbjct: 62 SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDE---DEDNDDVSSGGYEDDGAGESLPDDD 118 Query: 387 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 ELAISKL LPQRL ESLEKRGITHLFPIQRAVLVPAL+ Sbjct: 119 ELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALE 156 [4][TOP] >UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984A30 Length = 764 Score = 107 bits (266), Expect = 6e-22 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%) Frame = +3 Query: 90 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254 +S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57 Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395 VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117 Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+ Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152 [5][TOP] >UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PRF1_VITVI Length = 762 Score = 107 bits (266), Expect = 6e-22 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%) Frame = +3 Query: 90 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254 +S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57 Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395 VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117 Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+ Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152 [6][TOP] >UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5C4J0_VITVI Length = 786 Score = 107 bits (266), Expect = 6e-22 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%) Frame = +3 Query: 90 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254 +S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57 Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395 VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117 Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+ Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152 [7][TOP] >UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica Group RepID=Q0DM51-3 Length = 757 Score = 92.0 bits (227), Expect = 2e-17 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 9/98 (9%) Frame = +3 Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383 RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101 Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497 +ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPAL 139 [8][TOP] >UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica Group RepID=RH3_ORYSJ Length = 758 Score = 92.0 bits (227), Expect = 2e-17 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 9/98 (9%) Frame = +3 Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383 RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101 Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497 +ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPAL 139 [9][TOP] >UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR Length = 735 Score = 90.9 bits (224), Expect = 4e-17 Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 19/131 (14%) Frame = +3 Query: 165 SNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLV--------PSAVATPNSVLSEEAFKSLG 320 S+ LS P F SL+ +T+ SL++ PSA+ATPN +LSEEAFK G Sbjct: 6 SSASFLSEKPPHFN--SLIAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFK--G 61 Query: 321 LSDHDEYDLDGDNNN-VEADDGE----------ELAISKLSLPQRLEESLEKRGITHLFP 467 L +++ D D ++ V+ D E EL ISKL LPQRL ++L+ RGITHLFP Sbjct: 62 LDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQRLVQTLQNRGITHLFP 121 Query: 468 IQRAVLVPALQ 500 IQRAVL+P L+ Sbjct: 122 IQRAVLIPTLE 132 [10][TOP] >UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare RepID=Q6L724_HORVU Length = 764 Score = 89.7 bits (221), Expect = 9e-17 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 6/85 (7%) Frame = +3 Query: 264 SAVATPNSVLSEEAFKSLGLS------DHDEYDLDGDNNNVEADDGEELAISKLSLPQRL 425 +A+A+PNSVLSE AFK LGL D D Y D + D +ELAIS+L LP +L Sbjct: 43 AAIASPNSVLSEHAFKRLGLGAGSDDEDEDGYGSDQEGPAAVEGDKDELAISRLGLPAQL 102 Query: 426 EESLEKRGITHLFPIQRAVLVPALQ 500 +LEKRGITHLFPIQRAVL+PAL+ Sbjct: 103 VATLEKRGITHLFPIQRAVLIPALE 127 [11][TOP] >UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR Length = 775 Score = 89.4 bits (220), Expect = 1e-16 Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 11/97 (11%) Frame = +3 Query: 243 SSSLLVPSAVATPNSVLSEEAFKSL-GLSDHDEYDLDGDNNNVEADDGE----------E 389 SSS PSA+A+PNS+LSEEAFK L G SD E D+D +V+ E E Sbjct: 74 SSSFSPPSAIASPNSILSEEAFKGLDGFSDF-EADVDAGGADVDYASSETEPSSNTSEDE 132 Query: 390 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 L +SKL LP RL ++L+ RGITHLFPIQRAVL+PAL+ Sbjct: 133 LDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALE 169 [12][TOP] >UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago truncatula RepID=Q2HUZ8_MEDTR Length = 753 Score = 89.0 bits (219), Expect = 2e-16 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 7/143 (4%) Frame = +3 Query: 93 STVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRI---HSSSLLVP 263 +++G + ++P LE+ K K + + S K F+ + R R+ +SS +P Sbjct: 5 TSIGASTACKLPSLELYK---KHKLTSIPTSSVKFHFSDGNKSRHINRLANFNSSDRFLP 61 Query: 264 SAVATPNS----VLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 431 SAVATPNS +LS+EAFK LG S E + + + + + +EL ISKL LP +L + Sbjct: 62 SAVATPNSSSSSLLSDEAFKGLGSSFDGESEDEDFPSRTTSINADELDISKLDLPSQLVD 121 Query: 432 SLEKRGITHLFPIQRAVLVPALQ 500 SL RGIT LFPIQRAVLVPAL+ Sbjct: 122 SLRDRGITQLFPIQRAVLVPALE 144 [13][TOP] >UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKW8_PICSI Length = 802 Score = 87.4 bits (215), Expect = 5e-16 Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 43/181 (23%) Frame = +3 Query: 87 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLS-------LDKPFFTPLSLVRRTRR--- 236 MAS +GV S Q LE+S+ S LS S +D+ F L + + + + Sbjct: 1 MASVMGVSSSLQALSLEVSRRVPMPVSGALSSSSSSFLNSVDRGHFLGLPVSKNSTKRTI 60 Query: 237 ------------------------IHSSSLLVPSAVATPNSVLSEEAFKSLGLSD----- 329 + SS+L +AV++PNS++SEEAFK LGLS Sbjct: 61 ESLLKRGCTEFHVYEFTKFSPSPGLKSSTLQSSAAVSSPNSIISEEAFKGLGLSSGSSLN 120 Query: 330 -HDEYDLDGDNNN---VEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497 D+YD + + N V+ +DG L +S L+L Q L E+L RGITHLFPIQRAVLVPAL Sbjct: 121 LSDDYDYEDEIGNDVVVDNNDGN-LDLSGLNLSQELVEALANRGITHLFPIQRAVLVPAL 179 Query: 498 Q 500 + Sbjct: 180 E 180 [14][TOP] >UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE Length = 744 Score = 85.9 bits (211), Expect = 1e-15 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 6/84 (7%) Frame = +3 Query: 267 AVATPNSVLSEEAFKSLGLSDHDE-----YDLDGDNNNVEAD-DGEELAISKLSLPQRLE 428 A+A+PNSVLSE AFK L L DE Y D D + D EELAI++L LP L Sbjct: 41 ALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDELV 100 Query: 429 ESLEKRGITHLFPIQRAVLVPALQ 500 +LEKRGITHLFPIQRAVL+PAL+ Sbjct: 101 ATLEKRGITHLFPIQRAVLIPALE 124 [15][TOP] >UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F737_ORYSJ Length = 697 Score = 82.4 bits (202), Expect = 1e-14 Identities = 53/112 (47%), Positives = 65/112 (58%), Gaps = 23/112 (20%) Frame = +3 Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383 RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101 Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPAL 497 +ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPAL 153 [16][TOP] >UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8AMQ6_ORYSI Length = 779 Score = 77.4 bits (189), Expect = 5e-13 Identities = 54/119 (45%), Positives = 64/119 (53%), Gaps = 30/119 (25%) Frame = +3 Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDE-----YDLD------GDNNNVEA- 374 RR A+A+PNSVLSE AFK L LSD +E Y D D VEA Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEGAYGSDEEGAYGSDEEGVEAV 101 Query: 375 ----DDGEELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPAL 497 D +ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL Sbjct: 102 GGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPAL 160 [17][TOP] >UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFR6_PHYPA Length = 793 Score = 68.9 bits (167), Expect = 2e-10 Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 10/89 (11%) Frame = +3 Query: 264 SAVATPNSVLSEEAFKSLGLS-----DHDEYDLDGDN-----NNVEADDGEELAISKLSL 413 +AVAT V + S G S + DE D+D D +N DDG+ELAIS+L + Sbjct: 85 NAVATDFLVAQKGRAGSFGYSRGTDSEEDESDIDDDAEVIRVDNESMDDGDELAISRLGI 144 Query: 414 PQRLEESLEKRGITHLFPIQRAVLVPALQ 500 P + ++L KRGIT LFPIQRAVL PA+Q Sbjct: 145 PDAVADALAKRGITQLFPIQRAVLEPAMQ 173 [18][TOP] >UniRef100_B9N3Z1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z1_POPTR Length = 377 Score = 60.5 bits (145), Expect = 6e-08 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 4/100 (4%) Frame = +3 Query: 213 SLVRRTRRIHSS----SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADD 380 SL+ +T+ I ++ S + SA++TPNS+L++ L D+ + D N+ + Sbjct: 15 SLIDKTQFITTTATSISSFILSAISTPNSILAQNT----QLDDNFKDGTDALNHETTRPN 70 Query: 381 GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500 ++L IS L LPQRL ++L +GIT LF IQRAVLVPAL+ Sbjct: 71 -DQLDISNLCLPQRLIQTLHTQGITILFTIQRAVLVPALE 109 [19][TOP] >UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7H7_PHYPA Length = 689 Score = 57.8 bits (138), Expect = 4e-07 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%) Frame = +3 Query: 264 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDN---NNVEADDGEELAISKLSLPQRLEES 434 SA+AT + S F D DE+D + + +N DD +ELA++ L +PQ + ++ Sbjct: 4 SAIATDYA--STSIFGLTDGLDTDEFDDEEEIIRVDNESVDDEDELAVANLGIPQAVVDA 61 Query: 435 LEKRGITHLFPIQRAVLVPALQ 500 L KRGI LFPIQRAVL PA+Q Sbjct: 62 LAKRGIEKLFPIQRAVLDPAMQ 83