AV529504 ( APZL38g02R )

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[1][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
           Tax=Arabidopsis thaliana RepID=Q8L7S8-2
          Length = 747

 Score =  270 bits (690), Expect = 4e-71
 Identities = 138/138 (100%), Positives = 138/138 (100%)
 Frame = +3

Query: 87  MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 266
           MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1   MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60

Query: 267 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 446
           AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61  AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120

Query: 447 GITHLFPIQRAVLVPALQ 500
           GITHLFPIQRAVLVPALQ
Sbjct: 121 GITHLFPIQRAVLVPALQ 138

[2][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
           RepID=RH3_ARATH
          Length = 748

 Score =  270 bits (690), Expect = 4e-71
 Identities = 138/138 (100%), Positives = 138/138 (100%)
 Frame = +3

Query: 87  MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 266
           MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1   MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60

Query: 267 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 446
           AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61  AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120

Query: 447 GITHLFPIQRAVLVPALQ 500
           GITHLFPIQRAVLVPALQ
Sbjct: 121 GITHLFPIQRAVLVPALQ 138

[3][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
           communis RepID=B9RFT3_RICCO
          Length = 772

 Score =  120 bits (301), Expect = 5e-26
 Identities = 82/158 (51%), Positives = 99/158 (62%), Gaps = 21/158 (13%)
 Frame = +3

Query: 90  ASTVGVPSLYQVPHLEISKPNSKKRSNCLSL-SLDKPFFTPLSLV------RRTRRIHSS 248
           +S +GV S++  P +E+S  + K  S  LS+ + DKP F  L L        +    H  
Sbjct: 4   SSVLGVSSIFHTPSVELS--SRKTNSTTLSIPTTDKPHFNSLVLQSCSLYNNKHGHGHGH 61

Query: 249 SLLVPSAVATPNSVLSEEAFKSLG--LSDHDEYDLDGDNNNVEA----DDG--------E 386
           S  V SA+A PNS+LSEEAFK LG  LSD DE   D DN++V +    DDG        +
Sbjct: 62  SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDE---DEDNDDVSSGGYEDDGAGESLPDDD 118

Query: 387 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           ELAISKL LPQRL ESLEKRGITHLFPIQRAVLVPAL+
Sbjct: 119 ELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALE 156

[4][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984A30
          Length = 764

 Score =  107 bits (266), Expect = 6e-22
 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%)
 Frame = +3

Query: 90  ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254
           +S +GV S+YQ   LE+S+     R++  SLSL     T L + +   TR +  +SL   
Sbjct: 3   SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57

Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395
                  VPSA+ATPNSVLSEEAFK LG    D  D+   +++ +       A   +ELA
Sbjct: 58  FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117

Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152

[5][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PRF1_VITVI
          Length = 762

 Score =  107 bits (266), Expect = 6e-22
 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%)
 Frame = +3

Query: 90  ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254
           +S +GV S+YQ   LE+S+     R++  SLSL     T L + +   TR +  +SL   
Sbjct: 3   SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57

Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395
                  VPSA+ATPNSVLSEEAFK LG    D  D+   +++ +       A   +ELA
Sbjct: 58  FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117

Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152

[6][TOP]
>UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C4J0_VITVI
          Length = 786

 Score =  107 bits (266), Expect = 6e-22
 Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 18/155 (11%)
 Frame = +3

Query: 90  ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 254
           +S +GV S+YQ   LE+S+     R++  SLSL     T L + +   TR +  +SL   
Sbjct: 3   SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57

Query: 255 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 395
                  VPSA+ATPNSVLSEEAFK LG    D  D+   +++ +       A   +ELA
Sbjct: 58  FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117

Query: 396 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           +++L LP RL ESLE+RGITHLFPIQRAVLVPAL+
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALE 152

[7][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
           sativa Japonica Group RepID=Q0DM51-3
          Length = 757

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
 Frame = +3

Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383
           RR          A+A+PNSVLSE AFK L LSD +E + +G    D   VEA      D 
Sbjct: 42  RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101

Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497
           +ELAI++L LP++L  +LEKRGITHLFPIQRAVL+PAL
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPAL 139

[8][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
           Group RepID=RH3_ORYSJ
          Length = 758

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
 Frame = +3

Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383
           RR          A+A+PNSVLSE AFK L LSD +E + +G    D   VEA      D 
Sbjct: 42  RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101

Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497
           +ELAI++L LP++L  +LEKRGITHLFPIQRAVL+PAL
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPAL 139

[9][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
          Length = 735

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 19/131 (14%)
 Frame = +3

Query: 165 SNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLV--------PSAVATPNSVLSEEAFKSLG 320
           S+   LS   P F   SL+ +T+     SL++        PSA+ATPN +LSEEAFK  G
Sbjct: 6   SSASFLSEKPPHFN--SLIAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFK--G 61

Query: 321 LSDHDEYDLDGDNNN-VEADDGE----------ELAISKLSLPQRLEESLEKRGITHLFP 467
           L    +++ D D ++ V+ D  E          EL ISKL LPQRL ++L+ RGITHLFP
Sbjct: 62  LDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQRLVQTLQNRGITHLFP 121

Query: 468 IQRAVLVPALQ 500
           IQRAVL+P L+
Sbjct: 122 IQRAVLIPTLE 132

[10][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
           RepID=Q6L724_HORVU
          Length = 764

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
 Frame = +3

Query: 264 SAVATPNSVLSEEAFKSLGLS------DHDEYDLDGDNNNVEADDGEELAISKLSLPQRL 425
           +A+A+PNSVLSE AFK LGL       D D Y  D +       D +ELAIS+L LP +L
Sbjct: 43  AAIASPNSVLSEHAFKRLGLGAGSDDEDEDGYGSDQEGPAAVEGDKDELAISRLGLPAQL 102

Query: 426 EESLEKRGITHLFPIQRAVLVPALQ 500
             +LEKRGITHLFPIQRAVL+PAL+
Sbjct: 103 VATLEKRGITHLFPIQRAVLIPALE 127

[11][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
          Length = 775

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 11/97 (11%)
 Frame = +3

Query: 243 SSSLLVPSAVATPNSVLSEEAFKSL-GLSDHDEYDLDGDNNNVEADDGE----------E 389
           SSS   PSA+A+PNS+LSEEAFK L G SD  E D+D    +V+    E          E
Sbjct: 74  SSSFSPPSAIASPNSILSEEAFKGLDGFSDF-EADVDAGGADVDYASSETEPSSNTSEDE 132

Query: 390 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           L +SKL LP RL ++L+ RGITHLFPIQRAVL+PAL+
Sbjct: 133 LDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALE 169

[12][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
           truncatula RepID=Q2HUZ8_MEDTR
          Length = 753

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 7/143 (4%)
 Frame = +3

Query: 93  STVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRI---HSSSLLVP 263
           +++G  +  ++P LE+ K   K +   +  S  K  F+  +  R   R+   +SS   +P
Sbjct: 5   TSIGASTACKLPSLELYK---KHKLTSIPTSSVKFHFSDGNKSRHINRLANFNSSDRFLP 61

Query: 264 SAVATPNS----VLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 431
           SAVATPNS    +LS+EAFK LG S   E + +   +   + + +EL ISKL LP +L +
Sbjct: 62  SAVATPNSSSSSLLSDEAFKGLGSSFDGESEDEDFPSRTTSINADELDISKLDLPSQLVD 121

Query: 432 SLEKRGITHLFPIQRAVLVPALQ 500
           SL  RGIT LFPIQRAVLVPAL+
Sbjct: 122 SLRDRGITQLFPIQRAVLVPALE 144

[13][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LKW8_PICSI
          Length = 802

 Score = 87.4 bits (215), Expect = 5e-16
 Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 43/181 (23%)
 Frame = +3

Query: 87  MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLS-------LDKPFFTPLSLVRRTRR--- 236
           MAS +GV S  Q   LE+S+      S  LS S       +D+  F  L + + + +   
Sbjct: 1   MASVMGVSSSLQALSLEVSRRVPMPVSGALSSSSSSFLNSVDRGHFLGLPVSKNSTKRTI 60

Query: 237 ------------------------IHSSSLLVPSAVATPNSVLSEEAFKSLGLSD----- 329
                                   + SS+L   +AV++PNS++SEEAFK LGLS      
Sbjct: 61  ESLLKRGCTEFHVYEFTKFSPSPGLKSSTLQSSAAVSSPNSIISEEAFKGLGLSSGSSLN 120

Query: 330 -HDEYDLDGDNNN---VEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 497
             D+YD + +  N   V+ +DG  L +S L+L Q L E+L  RGITHLFPIQRAVLVPAL
Sbjct: 121 LSDDYDYEDEIGNDVVVDNNDGN-LDLSGLNLSQELVEALANRGITHLFPIQRAVLVPAL 179

Query: 498 Q 500
           +
Sbjct: 180 E 180

[14][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
          Length = 744

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +3

Query: 267 AVATPNSVLSEEAFKSLGLSDHDE-----YDLDGDNNNVEAD-DGEELAISKLSLPQRLE 428
           A+A+PNSVLSE AFK L L   DE     Y  D D      + D EELAI++L LP  L 
Sbjct: 41  ALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDELV 100

Query: 429 ESLEKRGITHLFPIQRAVLVPALQ 500
            +LEKRGITHLFPIQRAVL+PAL+
Sbjct: 101 ATLEKRGITHLFPIQRAVLIPALE 124

[15][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9F737_ORYSJ
          Length = 697

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 53/112 (47%), Positives = 65/112 (58%), Gaps = 23/112 (20%)
 Frame = +3

Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 383
           RR          A+A+PNSVLSE AFK L LSD +E + +G    D   VEA      D 
Sbjct: 42  RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101

Query: 384 EELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPAL 497
           +ELAI++L LP++L  +LEKRGITHLFPIQ              RAVL+PAL
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPAL 153

[16][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8AMQ6_ORYSI
          Length = 779

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 54/119 (45%), Positives = 64/119 (53%), Gaps = 30/119 (25%)
 Frame = +3

Query: 231 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDE-----YDLD------GDNNNVEA- 374
           RR          A+A+PNSVLSE AFK L LSD +E     Y  D       D   VEA 
Sbjct: 42  RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEGAYGSDEEGAYGSDEEGVEAV 101

Query: 375 ----DDGEELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPAL 497
                D +ELAI++L LP++L  +LEKRGITHLFPIQ              RAVL+PAL
Sbjct: 102 GGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPAL 160

[17][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RFR6_PHYPA
          Length = 793

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
 Frame = +3

Query: 264 SAVATPNSVLSEEAFKSLGLS-----DHDEYDLDGDN-----NNVEADDGEELAISKLSL 413
           +AVAT   V  +    S G S     + DE D+D D      +N   DDG+ELAIS+L +
Sbjct: 85  NAVATDFLVAQKGRAGSFGYSRGTDSEEDESDIDDDAEVIRVDNESMDDGDELAISRLGI 144

Query: 414 PQRLEESLEKRGITHLFPIQRAVLVPALQ 500
           P  + ++L KRGIT LFPIQRAVL PA+Q
Sbjct: 145 PDAVADALAKRGITQLFPIQRAVLEPAMQ 173

[18][TOP]
>UniRef100_B9N3Z1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z1_POPTR
          Length = 377

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
 Frame = +3

Query: 213 SLVRRTRRIHSS----SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADD 380
           SL+ +T+ I ++    S  + SA++TPNS+L++       L D+ +   D  N+     +
Sbjct: 15  SLIDKTQFITTTATSISSFILSAISTPNSILAQNT----QLDDNFKDGTDALNHETTRPN 70

Query: 381 GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 500
            ++L IS L LPQRL ++L  +GIT LF IQRAVLVPAL+
Sbjct: 71  -DQLDISNLCLPQRLIQTLHTQGITILFTIQRAVLVPALE 109

[19][TOP]
>UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9S7H7_PHYPA
          Length = 689

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = +3

Query: 264 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDN---NNVEADDGEELAISKLSLPQRLEES 434
           SA+AT  +  S   F      D DE+D + +    +N   DD +ELA++ L +PQ + ++
Sbjct: 4   SAIATDYA--STSIFGLTDGLDTDEFDDEEEIIRVDNESVDDEDELAVANLGIPQAVVDA 61

Query: 435 LEKRGITHLFPIQRAVLVPALQ 500
           L KRGI  LFPIQRAVL PA+Q
Sbjct: 62  LAKRGIEKLFPIQRAVLDPAMQ 83