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[1][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 297 bits (760), Expect = 4e-79
Identities = 152/152 (100%), Positives = 152/152 (100%)
Frame = +2
Query: 89 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 268
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 269 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 448
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120
Query: 449 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
GITHLFPIQRAVLVPALQGRDIIARAKTGTGK
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
[2][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 297 bits (760), Expect = 4e-79
Identities = 152/152 (100%), Positives = 152/152 (100%)
Frame = +2
Query: 89 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 268
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 269 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 448
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120
Query: 449 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
GITHLFPIQRAVLVPALQGRDIIARAKTGTGK
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
[3][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 146 bits (369), Expect = 8e-34
Identities = 95/172 (55%), Positives = 113/172 (65%), Gaps = 21/172 (12%)
Frame = +2
Query: 92 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSL-SLDKPFFTPLSLV------RRTRRIHSS 250
+S +GV S++ P +E+S + K S LS+ + DKP F L L + H
Sbjct: 4 SSVLGVSSIFHTPSVELS--SRKTNSTTLSIPTTDKPHFNSLVLQSCSLYNNKHGHGHGH 61
Query: 251 SLLVPSAVATPNSVLSEEAFKSLG--LSDHDEYDLDGDNNNVEA----DDG--------E 388
S V SA+A PNS+LSEEAFK LG LSD DE D DN++V + DDG +
Sbjct: 62 SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDE---DEDNDDVSSGGYEDDGAGESLPDDD 118
Query: 389 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
ELAISKL LPQRL ESLEKRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGK
Sbjct: 119 ELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGK 170
[4][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 133 bits (334), Expect = 1e-29
Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 18/169 (10%)
Frame = +2
Query: 92 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 256
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 257 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 397
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 398 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGK
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGK 166
[5][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 133 bits (334), Expect = 1e-29
Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 18/169 (10%)
Frame = +2
Query: 92 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 256
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 257 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 397
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 398 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGK
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGK 166
[6][TOP]
>UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C4J0_VITVI
Length = 786
Score = 133 bits (334), Expect = 1e-29
Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 18/169 (10%)
Frame = +2
Query: 92 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 256
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 257 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 397
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 398 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGK
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGK 166
[7][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 118 bits (295), Expect = 3e-25
Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 9/113 (7%)
Frame = +2
Query: 233 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 385
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL GRD+IARAKTGTGK
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGK 154
[8][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 118 bits (295), Expect = 3e-25
Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 9/113 (7%)
Frame = +2
Query: 233 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 385
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL GRD+IARAKTGTGK
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGK 154
[9][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 117 bits (292), Expect = 7e-25
Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 19/145 (13%)
Frame = +2
Query: 167 SNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLV--------PSAVATPNSVLSEEAFKSLG 322
S+ LS P F SL+ +T+ SL++ PSA+ATPN +LSEEAFK G
Sbjct: 6 SSASFLSEKPPHFN--SLIAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFK--G 61
Query: 323 LSDHDEYDLDGDNNN-VEADDGE----------ELAISKLSLPQRLEESLEKRGITHLFP 469
L +++ D D ++ V+ D E EL ISKL LPQRL ++L+ RGITHLFP
Sbjct: 62 LDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQRLVQTLQNRGITHLFP 121
Query: 470 IQRAVLVPALQGRDIIARAKTGTGK 544
IQRAVL+P L+GRD+IARAKTGTGK
Sbjct: 122 IQRAVLIPTLEGRDLIARAKTGTGK 146
[10][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 115 bits (289), Expect = 2e-24
Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 6/99 (6%)
Frame = +2
Query: 266 SAVATPNSVLSEEAFKSLGLS------DHDEYDLDGDNNNVEADDGEELAISKLSLPQRL 427
+A+A+PNSVLSE AFK LGL D D Y D + D +ELAIS+L LP +L
Sbjct: 43 AAIASPNSVLSEHAFKRLGLGAGSDDEDEDGYGSDQEGPAAVEGDKDELAISRLGLPAQL 102
Query: 428 EESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+LEKRGITHLFPIQRAVL+PAL+GRD+IARAKTGTGK
Sbjct: 103 VATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGK 141
[11][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 115 bits (289), Expect = 2e-24
Identities = 74/157 (47%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
Frame = +2
Query: 95 STVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRI---HSSSLLVP 265
+++G + ++P LE+ K K + + S K F+ + R R+ +SS +P
Sbjct: 5 TSIGASTACKLPSLELYK---KHKLTSIPTSSVKFHFSDGNKSRHINRLANFNSSDRFLP 61
Query: 266 SAVATPNS----VLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 433
SAVATPNS +LS+EAFK LG S E + + + + + +EL ISKL LP +L +
Sbjct: 62 SAVATPNSSSSSLLSDEAFKGLGSSFDGESEDEDFPSRTTSINADELDISKLDLPSQLVD 121
Query: 434 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
SL RGIT LFPIQRAVLVPAL+GRDIIARAKTGTGK
Sbjct: 122 SLRDRGITQLFPIQRAVLVPALEGRDIIARAKTGTGK 158
[12][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 115 bits (288), Expect = 2e-24
Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 11/111 (9%)
Frame = +2
Query: 245 SSSLLVPSAVATPNSVLSEEAFKSL-GLSDHDEYDLDGDNNNVEADDGE----------E 391
SSS PSA+A+PNS+LSEEAFK L G SD E D+D +V+ E E
Sbjct: 74 SSSFSPPSAIASPNSILSEEAFKGLDGFSDF-EADVDAGGADVDYASSETEPSSNTSEDE 132
Query: 392 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
L +SKL LP RL ++L+ RGITHLFPIQRAVL+PAL+GRD+IARAKTGTGK
Sbjct: 133 LDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKTGTGK 183
[13][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LKW8_PICSI
Length = 802
Score = 112 bits (279), Expect = 2e-23
Identities = 80/195 (41%), Positives = 106/195 (54%), Gaps = 43/195 (22%)
Frame = +2
Query: 89 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLS-------LDKPFFTPLSLVRRTRR--- 238
MAS +GV S Q LE+S+ S LS S +D+ F L + + + +
Sbjct: 1 MASVMGVSSSLQALSLEVSRRVPMPVSGALSSSSSSFLNSVDRGHFLGLPVSKNSTKRTI 60
Query: 239 ------------------------IHSSSLLVPSAVATPNSVLSEEAFKSLGLSD----- 331
+ SS+L +AV++PNS++SEEAFK LGLS
Sbjct: 61 ESLLKRGCTEFHVYEFTKFSPSPGLKSSTLQSSAAVSSPNSIISEEAFKGLGLSSGSSLN 120
Query: 332 -HDEYDLDGDNNN---VEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 499
D+YD + + N V+ +DG L +S L+L Q L E+L RGITHLFPIQRAVLVPAL
Sbjct: 121 LSDDYDYEDEIGNDVVVDNNDGN-LDLSGLNLSQELVEALANRGITHLFPIQRAVLVPAL 179
Query: 500 QGRDIIARAKTGTGK 544
+GRD+I RAKTGTGK
Sbjct: 180 EGRDLIGRAKTGTGK 194
[14][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 112 bits (279), Expect = 2e-23
Identities = 62/98 (63%), Positives = 71/98 (72%), Gaps = 6/98 (6%)
Frame = +2
Query: 269 AVATPNSVLSEEAFKSLGLSDHDE-----YDLDGDNNNVEAD-DGEELAISKLSLPQRLE 430
A+A+PNSVLSE AFK L L DE Y D D + D EELAI++L LP L
Sbjct: 41 ALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDELV 100
Query: 431 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+LEKRGITHLFPIQRAVL+PAL+GRD+IARAKTGTGK
Sbjct: 101 ATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGK 138
[15][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F737_ORYSJ
Length = 697
Score = 108 bits (270), Expect = 3e-22
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 23/127 (18%)
Frame = +2
Query: 233 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 385
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPALQGRDIIAR 523
+ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL GRD+IAR
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALDGRDLIAR 161
Query: 524 AKTGTGK 544
AKTGTGK
Sbjct: 162 AKTGTGK 168
[16][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 103 bits (257), Expect = 8e-21
Identities = 67/134 (50%), Positives = 78/134 (58%), Gaps = 30/134 (22%)
Frame = +2
Query: 233 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDE-----YDLD------GDNNNVEA- 376
RR A+A+PNSVLSE AFK L LSD +E Y D D VEA
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEGAYGSDEEGAYGSDEEGVEAV 101
Query: 377 ----DDGEELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPALQ 502
D +ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL
Sbjct: 102 GGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALD 161
Query: 503 GRDIIARAKTGTGK 544
GRD+IARAKTGTGK
Sbjct: 162 GRDLIARAKTGTGK 175
[17][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFR6_PHYPA
Length = 793
Score = 93.6 bits (231), Expect = 8e-18
Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 10/103 (9%)
Frame = +2
Query: 266 SAVATPNSVLSEEAFKSLGLS-----DHDEYDLDGDN-----NNVEADDGEELAISKLSL 415
+AVAT V + S G S + DE D+D D +N DDG+ELAIS+L +
Sbjct: 85 NAVATDFLVAQKGRAGSFGYSRGTDSEEDESDIDDDAEVIRVDNESMDDGDELAISRLGI 144
Query: 416 PQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
P + ++L KRGIT LFPIQRAVL PA+QGRD+I RAKTGTGK
Sbjct: 145 PDAVADALAKRGITQLFPIQRAVLEPAMQGRDLIGRAKTGTGK 187
[18][TOP]
>UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7H7_PHYPA
Length = 689
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 266 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDN---NNVEADDGEELAISKLSLPQRLEES 436
SA+AT + S F D DE+D + + +N DD +ELA++ L +PQ + ++
Sbjct: 4 SAIATDYA--STSIFGLTDGLDTDEFDDEEEIIRVDNESVDDEDELAVANLGIPQAVVDA 61
Query: 437 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
L KRGI LFPIQRAVL PA+QGRD+I RAKTGTGK
Sbjct: 62 LAKRGIEKLFPIQRAVLDPAMQGRDLIGRAKTGTGK 97
[19][TOP]
>UniRef100_B9N3Z1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z1_POPTR
Length = 377
Score = 80.9 bits (198), Expect = 6e-14
Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 215 SLVRRTRRIHSS----SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADD 382
SL+ +T+ I ++ S + SA++TPNS+L++ L D+ + D N+ +
Sbjct: 15 SLIDKTQFITTTATSISSFILSAISTPNSILAQNT----QLDDNFKDGTDALNHETTRPN 70
Query: 383 GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
++L IS L LPQRL ++L +GIT LF IQRAVLVPAL+GRDIIAR K TGK
Sbjct: 71 -DQLDISNLCLPQRLIQTLHTQGITILFTIQRAVLVPALEGRDIIARVKNRTGK 123
[20][TOP]
>UniRef100_A9RFT8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RFT8_PHYPA
Length = 638
Score = 76.3 bits (186), Expect = 1e-12
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = +2
Query: 323 LSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 502
LS DE G N D ELAI L + + + +L KRGITHLFPIQRAVL PA++
Sbjct: 5 LSSSDEEGFVGKKNAGAGKD--ELAIDSLGVSEDIVNALAKRGITHLFPIQRAVLEPAMK 62
Query: 503 GRDIIARAKTGTGK 544
G+D+IARAKTGTGK
Sbjct: 63 GQDLIARAKTGTGK 76
[21][TOP]
>UniRef100_A9T4H8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T4H8_PHYPA
Length = 619
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+ELAI+ L + + + E+L KRGITHLFPIQRAVL PA++G+D+IARAKTGTGK
Sbjct: 2 DELAINSLGVSEDIVEALAKRGITHLFPIQRAVLEPAMKGQDLIARAKTGTGK 54
[22][TOP]
>UniRef100_UPI00019844A0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019844A0
Length = 666
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +2
Query: 287 SVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLF 466
SV+S + SD ++ GD E L ISKL + Q + +L +GIT LF
Sbjct: 89 SVVSRAEYAVADFSDEEKSSKGGD---------EGLEISKLGIAQEIVSALANKGITKLF 139
Query: 467 PIQRAVLVPALQGRDIIARAKTGTGK 544
PIQRAVL PA+QGRD+I RA+TGTGK
Sbjct: 140 PIQRAVLEPAMQGRDMIGRARTGTGK 165
[23][TOP]
>UniRef100_A5AH66 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AH66_VITVI
Length = 666
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +2
Query: 287 SVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLF 466
SV+S + SD ++ GD E L ISKL + Q + +L +GIT LF
Sbjct: 89 SVVSRAEYAVADFSDEEKSSKGGD---------EGLEISKLGIAQEIVSALANKGITKLF 139
Query: 467 PIQRAVLVPALQGRDIIARAKTGTGK 544
PIQRAVL PA+QGRD+I RA+TGTGK
Sbjct: 140 PIQRAVLEPAMQGRDMIGRARTGTGK 165
[24][TOP]
>UniRef100_B9S3L6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9S3L6_RICCO
Length = 323
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +2
Query: 359 NNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGT 538
NN++ +D+ E L I KL + Q + +L +RGIT LFPIQ+AVL PA+QGRD+ RA+TGT
Sbjct: 87 NNDINSDE-EGLEIGKLGIAQEIVSALARRGITKLFPIQKAVLEPAMQGRDLFGRARTGT 145
Query: 539 GK 544
GK
Sbjct: 146 GK 147
[25][TOP]
>UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum
bicolor RepID=C5YRW1_SORBI
Length = 618
Score = 70.9 bits (172), Expect = 6e-11
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L I+KL + ++ E L K+GIT LFPIQRAVL PA+QGRD++ RAKTGTGK
Sbjct: 96 EGLEIAKLGISNKIVERLAKKGITKLFPIQRAVLEPAMQGRDMVGRAKTGTGK 148
[26][TOP]
>UniRef100_B6SV06 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SV06_MAIZE
Length = 613
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +2
Query: 350 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 529
+G+ V+ + L I++L R+ E L RGIT LFPIQRAVL PA+QG+D+I RA+
Sbjct: 81 EGEGEGVDTGAEKGLEIARLGTSPRIVEKLAARGITRLFPIQRAVLEPAMQGKDMIGRAR 140
Query: 530 TGTGK 544
TGTGK
Sbjct: 141 TGTGK 145
[27][TOP]
>UniRef100_C5X9H0 Putative uncharacterized protein Sb02g002790 n=1 Tax=Sorghum
bicolor RepID=C5X9H0_SORBI
Length = 602
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +2
Query: 353 GDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 532
G+ V+ E L I++L + R+ E L RGIT LFPIQRAVL PA+QG+D+I RA+T
Sbjct: 73 GEGVGVDTGAEEGLEIARLWISPRIVEKLAARGITKLFPIQRAVLEPAMQGKDMIGRART 132
Query: 533 GTGK 544
GTGK
Sbjct: 133 GTGK 136
[28][TOP]
>UniRef100_C1MMH8 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMH8_9CHLO
Length = 803
Score = 68.2 bits (165), Expect = 4e-10
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +2
Query: 299 EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQR 478
+E F D ++YD D ++ A + + I + + +L KRGI LFPIQ
Sbjct: 113 DELFDDDDEDDEEDYDDDDEDEPAAAKNSDPNHIDNFPISVLTKAALRKRGIESLFPIQS 172
Query: 479 AVLVPALQGRDIIARAKTGTGK 544
AVL PAL+GRDI+ RA+TGTGK
Sbjct: 173 AVLAPALEGRDIVGRARTGTGK 194
[29][TOP]
>UniRef100_B9IHF6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IHF6_POPTR
Length = 551
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L IS+L + Q + +L K+GIT LFPIQRAVL PA+QG+D+ RA+TGTGK
Sbjct: 40 EGLEISRLGISQEIVGALAKKGITKLFPIQRAVLEPAMQGKDMFGRARTGTGK 92
[30][TOP]
>UniRef100_B9GE86 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GE86_ORYSJ
Length = 676
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGK
Sbjct: 144 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGK 196
[31][TOP]
>UniRef100_A2ZMM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZMM6_ORYSI
Length = 630
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGK
Sbjct: 96 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGK 148
[32][TOP]
>UniRef100_Q0ILZ4 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Oryza sativa Japonica
Group RepID=RH9_ORYSJ
Length = 628
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGK
Sbjct: 96 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGK 148
[33][TOP]
>UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana
RepID=RH9_ARATH
Length = 610
Score = 66.2 bits (160), Expect = 1e-09
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Frame = +2
Query: 227 RTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLD-GDNNNV-EADDGEELAI 400
+ R H S VPS + S++S F + + E D GD+ +V + G+ LAI
Sbjct: 63 KVRDFHVKS--VPSEFRS--SIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAI 118
Query: 401 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+ L + + ++L+ RGI LFPIQ+AVL PA++GRD+I RA+TGTGK
Sbjct: 119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGK 166
[34][TOP]
>UniRef100_Q0D8N0-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-2
Length = 585
Score = 65.9 bits (159), Expect = 2e-09
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Frame = +2
Query: 164 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 310
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 311 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 490
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 491 PALQGRDIIARAKTGTGK 544
PA+QG+D+I RA+TGTGK
Sbjct: 117 PAMQGKDMIGRARTGTGK 134
[35][TOP]
>UniRef100_Q0D8N0-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-3
Length = 330
Score = 65.9 bits (159), Expect = 2e-09
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Frame = +2
Query: 164 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 310
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 311 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 490
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 491 PALQGRDIIARAKTGTGK 544
PA+QG+D+I RA+TGTGK
Sbjct: 117 PAMQGKDMIGRARTGTGK 134
[36][TOP]
>UniRef100_Q0D8N0 DEAD-box ATP-dependent RNA helicase 53 n=3 Tax=Oryza sativa
RepID=RH53_ORYSJ
Length = 602
Score = 65.9 bits (159), Expect = 2e-09
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Frame = +2
Query: 164 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 310
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 311 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 490
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 491 PALQGRDIIARAKTGTGK 544
PA+QG+D+I RA+TGTGK
Sbjct: 117 PAMQGKDMIGRARTGTGK 134
[37][TOP]
>UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana
RepID=RH53_ARATH
Length = 616
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 353 GDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 532
GD+ +V G+ LAIS+L + + ++L +GI LFPIQ+AVL PA++GRD+I RA+T
Sbjct: 94 GDSESV---GGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRART 150
Query: 533 GTGK 544
GTGK
Sbjct: 151 GTGK 154
[38][TOP]
>UniRef100_B9HDF9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HDF9_POPTR
Length = 556
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 386 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E L IS L + + + SL K+GIT LFPIQ+AVL PA+QG+D+ RA+TGTGK
Sbjct: 65 EGLEISNLGISKEIVNSLAKKGITKLFPIQKAVLEPAMQGKDMFGRARTGTGK 117
[39][TOP]
>UniRef100_C1E681 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas sp. RCC299
RepID=C1E681_9CHLO
Length = 790
Score = 61.2 bits (147), Expect = 5e-08
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 329 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 508
D DE D + +++N + + + L + +L KRGI LFPIQ +VL PALQGR
Sbjct: 116 DDDEDDEEDEDDNKR----DPMHVDNFPLSDITKAALRKRGIETLFPIQASVLEPALQGR 171
Query: 509 DIIARAKTGTGK 544
D++ RA+TGTGK
Sbjct: 172 DVVGRARTGTGK 183
[40][TOP]
>UniRef100_UPI000194C8EA PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194C8EA
Length = 708
Score = 57.0 bits (136), Expect = 9e-07
Identities = 44/139 (31%), Positives = 65/139 (46%)
Frame = +2
Query: 128 PHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPSAVATPNSVLSEEA 307
P + SK SK+ + SL+K + S R SSS S+ +
Sbjct: 63 PKAKKSKSVSKQNGHAKEESLEKSRLSSFSSKSSRRSRQSSS--------------SDTS 108
Query: 308 FKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVL 487
S SD D+ +L GD +E A S S+ + + L+ RG+T+LFP+Q
Sbjct: 109 SDSESESDQDQ-ELTGDQ--------KEGAFSNFSISKETVQLLQARGVTYLFPVQVKTF 159
Query: 488 VPALQGRDIIARAKTGTGK 544
P G+D+IA+A+TGTGK
Sbjct: 160 NPVYTGKDVIAQARTGTGK 178
[41][TOP]
>UniRef100_C7QBM5 DEAD/DEAH box helicase domain protein n=1 Tax=Catenulispora
acidiphila DSM 44928 RepID=C7QBM5_CATAD
Length = 854
Score = 57.0 bits (136), Expect = 9e-07
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = +2
Query: 350 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 529
D D ++ E+ +G+ +A ++L LP+ L + L + G+ + FPIQ A + AL GR ++ +A+
Sbjct: 51 DVDFDDTESAEGDPVAFTELGLPEELVKKLAENGVHNTFPIQAATIPDALAGRHVLGKAR 110
Query: 530 TGTGK 544
TG+GK
Sbjct: 111 TGSGK 115
[42][TOP]
>UniRef100_UPI0001B587FC putative ATP-dependent RNA helicase n=1 Tax=Streptomyces sp. C
RepID=UPI0001B587FC
Length = 694
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +2
Query: 230 TRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE-LAISK 406
T + + +L V A+ +++ +E ++L D D+ + + +ADD E + +
Sbjct: 7 TEIVDAETLAVTEAM---DAIERDEIIEALEADVADVADVTAEADAADADDAEPTITFAD 63
Query: 407 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GK
Sbjct: 64 LGLPEGVVRKLGQNGVTSPFPIQAATIPDALAGKDILGRGRTGSGK 109
[43][TOP]
>UniRef100_UPI0001B4FB0E putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4FB0E
Length = 745
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = +2
Query: 350 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 529
D + + E G E+ ++L LP+++ L + G+T FPIQ A + A+ G+DI+ R +
Sbjct: 58 DAEQSTPETSKGPEITFAELGLPEQIVRKLAQNGVTTPFPIQAATIPDAMAGKDILGRGR 117
Query: 530 TGTGK 544
TG+GK
Sbjct: 118 TGSGK 122
[44][TOP]
>UniRef100_Q019E9 ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q019E9_OSTTA
Length = 683
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 380 DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
D + + + + ++L KRG+ LFPIQ+AVL PA+ G+D++ RA+TGTGK
Sbjct: 21 DADPADVDNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGK 75
[45][TOP]
>UniRef100_UPI0001AEE82A ATP-dependent RNA helicase n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEE82A
Length = 789
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +2
Query: 260 VPSAVA-TPNSVLSEEAFKSLGLSDH----DEYDLDGDNNNVEADDGEE-LAISKLSLPQ 421
+P+A A TP +V +E L +D D +LD + + EA+ ++ + + L LP+
Sbjct: 22 IPAAEAITPEAVTAEIPAAELPEADEAAQADVAELDAEAADDEAETEDDGVTFASLGLPE 81
Query: 422 RLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+ L + G+T FPIQ A + AL G+DI+ R +TG+GK
Sbjct: 82 GVVRKLAQNGVTKPFPIQAATIPDALAGKDILGRGRTGSGK 122
[46][TOP]
>UniRef100_B6KA36 Nucleolar RNA helicase, putative n=2 Tax=Toxoplasma gondii
RepID=B6KA36_TOXGO
Length = 840
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +2
Query: 284 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHL 463
+ +L E S +D + D D ++ +D G +S +L + +SL+KRGIT L
Sbjct: 82 DDLLKAEPSSSKEENDEQDGDSDAESGRPASDSG---LLSDYNLSKTSLKSLQKRGITRL 138
Query: 464 FPIQRAVLVPALQGRDIIARAKTGTGK 544
P+Q+A GRD + RA+TGTGK
Sbjct: 139 LPVQQAAYRHVFAGRDFVGRARTGTGK 165
[47][TOP]
>UniRef100_Q5BKP5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Mus musculus
RepID=Q5BKP5_MOUSE
Length = 734
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Frame = +2
Query: 311 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 448
K L D DEY+ +N++ +D EE A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 449 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
G+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 184
[48][TOP]
>UniRef100_Q99MJ9 ATP-dependent RNA helicase DDX50 n=2 Tax=Mus musculus
RepID=DDX50_MOUSE
Length = 734
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Frame = +2
Query: 311 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 448
K L D DEY+ +N++ +D EE A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 449 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
G+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 184
[49][TOP]
>UniRef100_UPI00006D452E PREDICTED: similar to nucleolar protein GU2 n=1 Tax=Macaca mulatta
RepID=UPI00006D452E
Length = 737
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDSSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[50][TOP]
>UniRef100_UPI000036E757 PREDICTED: nucleolar protein GU2 n=1 Tax=Pan troglodytes
RepID=UPI000036E757
Length = 737
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[51][TOP]
>UniRef100_A4RXF6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RXF6_OSTLU
Length = 346
Score = 54.3 bits (129), Expect = 6e-06
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2
Query: 434 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+L KRG+ LFPIQ+AVL PAL G D++ RA+TGTGK
Sbjct: 15 ALRKRGVDTLFPIQQAVLKPALSGEDVVGRARTGTGK 51
[52][TOP]
>UniRef100_Q5R409 Putative uncharacterized protein DKFZp459C132 (Fragment) n=1
Tax=Pongo abelii RepID=Q5R409_PONAB
Length = 413
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[53][TOP]
>UniRef100_Q53FI9 Nucleolar protein GU2 variant (Fragment) n=1 Tax=Homo sapiens
RepID=Q53FI9_HUMAN
Length = 363
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[54][TOP]
>UniRef100_B4DW97 cDNA FLJ61430, highly similar to ATP-dependent RNA helicase DDX50
(EC 3.6.1.-) n=1 Tax=Homo sapiens RepID=B4DW97_HUMAN
Length = 711
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE---ADDGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEDTLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[55][TOP]
>UniRef100_Q9BQ39 ATP-dependent RNA helicase DDX50 n=2 Tax=Homo sapiens
RepID=DDX50_HUMAN
Length = 737
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 281 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 451
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 452 ITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 187
[56][TOP]
>UniRef100_UPI000021DD77 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
isoform 2 n=1 Tax=Rattus norvegicus RepID=UPI000021DD77
Length = 734
Score = 53.9 bits (128), Expect = 7e-06
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Frame = +2
Query: 311 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 448
K L D DEY+ +N++ +D +E A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKADETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 449 GITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
G+T+LFPIQ P +G+D+IA+A+TGTGK
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGK 184
[57][TOP]
>UniRef100_Q3IDJ4 Putative ATP-dependent RNA helicase; putative cold-shock protein;
could be specific for rRNA folding n=1
Tax=Pseudoalteromonas haloplanktis TAC125
RepID=Q3IDJ4_PSEHT
Length = 462
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +2
Query: 395 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
A S L+LP L ++L G TH+ P+Q L P L G+DIIA+AKTG+GK
Sbjct: 5 AFSSLALPSGLVDNLSTLGYTHMTPVQAQSLPPVLAGKDIIAQAKTGSGK 54
[58][TOP]
>UniRef100_C5WM07 Putative uncharacterized protein Sb01g009400 n=1 Tax=Sorghum
bicolor RepID=C5WM07_SORBI
Length = 634
Score = 53.9 bits (128), Expect = 7e-06
Identities = 24/58 (41%), Positives = 40/58 (68%)
Frame = +2
Query: 371 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
E + E++ +L L ++L+ +L K+GIT PIQR + L+G+D++A+AKTG+GK
Sbjct: 30 EVKEEVEVSFDELGLDEQLKRALRKKGITKATPIQREAIPLILEGKDVVAKAKTGSGK 87
[59][TOP]
>UniRef100_UPI0000ECB487 ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box protein 50)
(Nucleolar protein Gu2) (Gu-beta). n=2 Tax=Gallus gallus
RepID=UPI0000ECB487
Length = 693
Score = 53.5 bits (127), Expect = 1e-05
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 326 SDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQG 505
S+ D D D ++ +E A S + + + L+ RG+T+LFP+Q P G
Sbjct: 91 SETSSGDGDSDQEQEMTEEQKEGAFSNFPISKGTIQLLQARGVTYLFPVQVKTFNPVYSG 150
Query: 506 RDIIARAKTGTGK 544
+D+IA+A+TGTGK
Sbjct: 151 KDVIAQARTGTGK 163
[60][TOP]
>UniRef100_A1T7V0 DEAD/DEAH box helicase domain protein n=1 Tax=Mycobacterium
vanbaalenii PYR-1 RepID=A1T7V0_MYCVP
Length = 443
Score = 53.5 bits (127), Expect = 1e-05
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +2
Query: 407 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
L +P L +SL +RGIT FPIQ A L AL GRD++ R KTG+GK
Sbjct: 9 LGVPAPLVQSLSQRGITEPFPIQAATLPDALAGRDVLGRGKTGSGK 54
[61][TOP]
>UniRef100_C0U880 DNA/RNA helicase, superfamily II n=1 Tax=Geodermatophilus obscurus
DSM 43160 RepID=C0U880_9ACTO
Length = 508
Score = 53.5 bits (127), Expect = 1e-05
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 401 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 544
++L LPQ+L +LE+RGI H F IQ + L AL GRD++ +A TG+GK
Sbjct: 30 AQLGLPQQLVTALERRGIRHPFAIQASALPDALAGRDVLGKAATGSGK 77
[62][TOP]
>UniRef100_B9HF37 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HF37_POPTR
Length = 597
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +2
Query: 326 SDH-DEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR--GITHLFPIQRAVLVPA 496
S+H E L+ + + VE +D E + +L L RL +L K+ I PIQRA +
Sbjct: 15 SEHKQEIQLNEEPDVVEEEDDEAQSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLI 74
Query: 497 LQGRDIIARAKTGTGK 544
LQG+D++ARAKTG+GK
Sbjct: 75 LQGKDVVARAKTGSGK 90
[63][TOP]
>UniRef100_A9P853 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9P853_POPTR
Length = 619
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +2
Query: 326 SDH-DEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR--GITHLFPIQRAVLVPA 496
S+H E L+ + + VE +D E + +L L RL +L K+ I PIQRA +
Sbjct: 15 SEHKQEIQLNEEPDVVEEEDDEAQSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLI 74
Query: 497 LQGRDIIARAKTGTGK 544
LQG+D++ARAKTG+GK
Sbjct: 75 LQGKDVVARAKTGSGK 90