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[1][TOP]
>UniRef100_UPI00005DC1C1 NRPA2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC1C1
Length = 1178
Score = 152 bits (383), Expect = 1e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM
Sbjct: 1103 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 1162
Query: 220 NIKMTLQLSDREGVTD 173
NIKMTLQLSDREGVTD
Sbjct: 1163 NIKMTLQLSDREGVTD 1178
[2][TOP]
>UniRef100_Q9FXG4 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FXG4_ARATH
Length = 1233
Score = 152 bits (383), Expect = 1e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM
Sbjct: 1158 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 1217
Query: 220 NIKMTLQLSDREGVTD 173
NIKMTLQLSDREGVTD
Sbjct: 1218 NIKMTLQLSDREGVTD 1233
[3][TOP]
>UniRef100_Q9C8S4 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9C8S4_ARATH
Length = 1114
Score = 152 bits (383), Expect = 1e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM
Sbjct: 1039 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 1098
Query: 220 NIKMTLQLSDREGVTD 173
NIKMTLQLSDREGVTD
Sbjct: 1099 NIKMTLQLSDREGVTD 1114
[4][TOP]
>UniRef100_Q0WLL1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=Q0WLL1_ARATH
Length = 578
Score = 152 bits (383), Expect = 1e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM
Sbjct: 503 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 562
Query: 220 NIKMTLQLSDREGVTD 173
NIKMTLQLSDREGVTD
Sbjct: 563 NIKMTLQLSDREGVTD 578
[5][TOP]
>UniRef100_UPI0001985C29 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985C29
Length = 825
Score = 107 bits (267), Expect = 4e-22
Identities = 50/73 (68%), Positives = 65/73 (89%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
+LT+S++ QK+ ++EIG LPPGR PKKVTC++C+TSKGMETV+MPY+FR+LAAELA+M
Sbjct: 753 ILTTSIIQ-PQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAM 811
Query: 220 NIKMTLQLSDREG 182
NIKMTLQLS+ G
Sbjct: 812 NIKMTLQLSNGAG 824
[6][TOP]
>UniRef100_A7Q5C4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7Q5C4_VITVI
Length = 752
Score = 107 bits (267), Expect = 4e-22
Identities = 50/73 (68%), Positives = 65/73 (89%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
+LT+S++ QK+ ++EIG LPPGR PKKVTC++C+TSKGMETV+MPY+FR+LAAELA+M
Sbjct: 680 ILTTSIIQ-PQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAM 738
Query: 220 NIKMTLQLSDREG 182
NIKMTLQLS+ G
Sbjct: 739 NIKMTLQLSNGAG 751
[7][TOP]
>UniRef100_B9SVH7 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SVH7_RICCO
Length = 1159
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = -2
Query: 400 LLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASM 221
+LT+S + Q K+++++IG LPP PKKV C+SC+TSKGMETVAMPYVFRYLAAELA+M
Sbjct: 1087 ILTTSFIQTQ-KRVVRDIGGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAM 1145
Query: 220 NIKMTLQLS 194
NIKM +QLS
Sbjct: 1146 NIKMNVQLS 1154
[8][TOP]
>UniRef100_B9GLY1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9GLY1_POPTR
Length = 1109
Score = 95.5 bits (236), Expect = 2e-18
Identities = 42/60 (70%), Positives = 55/60 (91%)
Frame = -2
Query: 370 QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 191
Q++++++IG LPP + PKKV C++C+TSKG+ETVAMPYVFRYLAAELA+MNIKMTL L+D
Sbjct: 1050 QRRIVRDIGGLPPVKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNIKMTLHLND 1109
[9][TOP]
>UniRef100_C5XT13 Putative uncharacterized protein Sb04g001790 n=1 Tax=Sorghum
bicolor RepID=C5XT13_SORBI
Length = 192
Score = 87.4 bits (215), Expect = 4e-16
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = -2
Query: 400 LLTSSVVNVQ-QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELAS 224
LLT++++ QKK E+ LP R PK C +CKTSKGMETVAMPYVFRYLAAELA+
Sbjct: 112 LLTATMIESNNQKKAKHEMLGLPTVRPPKNFACQACKTSKGMETVAMPYVFRYLAAELAA 171
Query: 223 MNIKMTLQLSDREGV 179
MNIK+ L+LS++ G+
Sbjct: 172 MNIKLELRLSNKSGL 186
[10][TOP]
>UniRef100_UPI0000DD9A19 Os10g0495600 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000DD9A19
Length = 1127
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = -2
Query: 400 LLTSSVVNVQ-QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELAS 224
LLT++V+ + QKK +++ LP + PK C +CKTSKGMETVAMPYVFRYLA+ELA+
Sbjct: 1045 LLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAA 1104
Query: 223 MNIKMTLQLSDR 188
MNIK+ L+LS+R
Sbjct: 1105 MNIKLELRLSNR 1116
[11][TOP]
>UniRef100_Q8LNU6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q8LNU6_ORYSJ
Length = 855
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = -2
Query: 400 LLTSSVVNVQ-QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELAS 224
LLT++V+ + QKK +++ LP + PK C +CKTSKGMETVAMPYVFRYLA+ELA+
Sbjct: 773 LLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAA 832
Query: 223 MNIKMTLQLSDR 188
MNIK+ L+LS+R
Sbjct: 833 MNIKLELRLSNR 844
[12][TOP]
>UniRef100_B9G6G0 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group
RepID=B9G6G0_ORYSJ
Length = 1150
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = -2
Query: 400 LLTSSVVNVQ-QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELAS 224
LLT++V+ + QKK +++ LP + PK C +CKTSKGMETVAMPYVFRYLA+ELA+
Sbjct: 1068 LLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAA 1127
Query: 223 MNIKMTLQLSDR 188
MNIK+ L+LS+R
Sbjct: 1128 MNIKLELRLSNR 1139
[13][TOP]
>UniRef100_B8BHP0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BHP0_ORYSI
Length = 1086
Score = 83.6 bits (205), Expect = 6e-15
Identities = 42/72 (58%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = -2
Query: 400 LLTSSVVNVQ-QKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELAS 224
LLT++V+ + QKK +++ LP + PK C +CKTS+GMETVAMPYVFRYLA+ELA+
Sbjct: 1004 LLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSRGMETVAMPYVFRYLASELAA 1063
Query: 223 MNIKMTLQLSDR 188
MNIK+ L+LS+R
Sbjct: 1064 MNIKLELRLSNR 1075
[14][TOP]
>UniRef100_A9T5Q2 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T5Q2_PHYPA
Length = 1199
Score = 63.9 bits (154), Expect = 5e-09
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -2
Query: 316 KVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLS 194
K C C TSKG+ETVAMP+VFRYLAAELA+MNIK+T+ LS
Sbjct: 1157 KKICRVCNTSKGIETVAMPFVFRYLAAELAAMNIKLTMTLS 1197
[15][TOP]
>UniRef100_C1FDM4 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FDM4_9CHLO
Length = 1192
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = -2
Query: 322 PKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 191
P+KV+C C T G+ VA+P+VF+YLAAELA+MNI++ L++ D
Sbjct: 1146 PRKVSCRVCNTGTGVHNVALPFVFKYLAAELAAMNIRIGLEVGD 1189