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[1][TOP] >UniRef100_O24600 DNA-directed RNA polymerase 3, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RPOT3_ARATH Length = 993 Score = 166 bits (419), Expect = 2e-39 Identities = 77/79 (97%), Positives = 78/79 (98%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 RE G+NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV Sbjct: 915 REAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 974 Query: 433 PKRGDFDLKEVLKSQYFFN 377 PKRGDFDLKEVLKSQYFFN Sbjct: 975 PKRGDFDLKEVLKSQYFFN 993 [2][TOP] >UniRef100_B9HWT3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HWT3_POPTR Length = 852 Score = 142 bits (358), Expect = 2e-32 Identities = 63/79 (79%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+NFAGVHDSYWTHACDVD MNRILREKFVELY TPILE+LL+SFQ S+PNL FPP+ Sbjct: 774 KEAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFPPL 833 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL++VL+S YFFN Sbjct: 834 PERGDFDLRDVLQSTYFFN 852 [3][TOP] >UniRef100_C5X2G2 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5X2G2_SORBI Length = 976 Score = 140 bits (353), Expect = 8e-32 Identities = 61/79 (77%), Positives = 74/79 (93%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVDTMN+ILREKFVELY+TPILE+LL+SF++S+P L FPP+ Sbjct: 898 KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPL 957 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFD+KEVL+S YFFN Sbjct: 958 PERGDFDMKEVLESPYFFN 976 [4][TOP] >UniRef100_B9T5S6 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9T5S6_RICCO Length = 589 Score = 139 bits (351), Expect = 1e-31 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVD MNRILREKFVELY TP+LE+LL+SFQ+S+P L FPP+ Sbjct: 511 KRAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPL 570 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL++VLKS YFFN Sbjct: 571 PERGDFDLQDVLKSPYFFN 589 [5][TOP] >UniRef100_Q8L6J3 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=1 Tax=Nicotiana tabacum RepID=RPO2B_TOBAC Length = 1021 Score = 139 bits (351), Expect = 1e-31 Identities = 62/79 (78%), Positives = 71/79 (89%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R G+NFAGVHDSYWTHACDVD +NRILREKFVELY TPILE LL+SFQ SYP L+FPP+ Sbjct: 943 RRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPL 1002 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL++VL+S YFFN Sbjct: 1003 PERGDFDLRDVLESPYFFN 1021 [6][TOP] >UniRef100_P69243 DNA-directed RNA polymerase 3A, chloroplastic n=2 Tax=Nicotiana RepID=RPO3A_TOBAC Length = 977 Score = 139 bits (349), Expect = 2e-31 Identities = 63/79 (79%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHACDVD MNRILREKFVELY+ PILEDLL+SFQ SYP L FPP+ Sbjct: 899 RDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPL 958 Query: 433 PKRGDFDLKEVLKSQYFFN 377 PKRGDFDL EVL+S YFFN Sbjct: 959 PKRGDFDLVEVLESPYFFN 977 [7][TOP] >UniRef100_B9HIV5 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HIV5_POPTR Length = 877 Score = 138 bits (348), Expect = 3e-31 Identities = 62/79 (78%), Positives = 71/79 (89%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+NFAGVHDSYWTHACDVD MNRILREKFVELY PILE+LL+SFQ S+PNL FPP+ Sbjct: 799 KEAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPL 858 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RG FDLK+VL+S YFFN Sbjct: 859 PERGVFDLKDVLRSTYFFN 877 [8][TOP] >UniRef100_A5AW22 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5AW22_VITVI Length = 168 Score = 138 bits (348), Expect = 3e-31 Identities = 61/79 (77%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+NFAGVHDSYWTHACDVD MNRILREKFV+LY TPILE+LL+SFQ+S+P L FPP+ Sbjct: 90 KKAGLNFAGVHDSYWTHACDVDEMNRILREKFVQLYETPILENLLESFQQSFPALEFPPL 149 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 150 PERGDFDLREVLESPYFFN 168 [9][TOP] >UniRef100_A7PAG7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PAG7_VITVI Length = 1035 Score = 137 bits (346), Expect = 5e-31 Identities = 60/79 (75%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+NFAGVHDSYWTHACDVD MNR+LREKFV+LY TPILE+LL+SFQ+S+P L FPP+ Sbjct: 957 KKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPL 1016 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 1017 PERGDFDLREVLESPYFFN 1035 [10][TOP] >UniRef100_Q8L6J1 DNA-directed RNA polymerase 3B, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RPO3B_TOBAC Length = 977 Score = 137 bits (346), Expect = 5e-31 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHACDVD MNRILREKFVELY+ PILEDLL++FQ+SYP L FPP+ Sbjct: 899 RDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPL 958 Query: 433 PKRGDFDLKEVLKSQYFFN 377 PKRGDF+L+EVL+S YFFN Sbjct: 959 PKRGDFNLREVLESPYFFN 977 [11][TOP] >UniRef100_Q8L6J5 DNA-directed RNA polymerase 1B, mitochondrial n=1 Tax=Nicotiana tabacum RepID=RPO1B_TOBAC Length = 1002 Score = 137 bits (346), Expect = 5e-31 Identities = 60/79 (75%), Positives = 74/79 (93%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILE+LL+SFQ+S+P+L FPP+ Sbjct: 924 KESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 984 PERGDFDLREVLESPYFFN 1002 [12][TOP] >UniRef100_P93661 DNA-directed RNA polymerase n=1 Tax=Chenopodium album RepID=P93661_CHEAL Length = 988 Score = 137 bits (345), Expect = 7e-31 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+NFAGVHDSYWTHACDVD MN+ILREKFVELY PILE+LL+SFQES+P L FPP+ Sbjct: 910 KKAGMNFAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQESFPTLQFPPL 969 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 970 PERGDFDLREVLESPYFFN 988 [13][TOP] >UniRef100_Q8VWF8 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial n=2 Tax=Nicotiana sylvestris RepID=RPOT2_NICSY Length = 1020 Score = 137 bits (344), Expect = 9e-31 Identities = 60/79 (75%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R G+NFAGVHDSYWTHACDVD +NRILREKFVELY PILE LL+SFQ SYP L+FPP+ Sbjct: 942 RRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPL 1001 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFD+++VL+S YFFN Sbjct: 1002 PERGDFDMRDVLESPYFFN 1020 [14][TOP] >UniRef100_Q8L6J2 DNA-directed RNA polymerase 2A (Fragment) n=1 Tax=Nicotiana tabacum RepID=RPO2A_TOBAC Length = 332 Score = 137 bits (344), Expect = 9e-31 Identities = 60/79 (75%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R G+NFAGVHDSYWTHACDVD +NRILREKFVELY PILE LL+SFQ SYP L+FPP+ Sbjct: 254 RRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPL 313 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFD+++VL+S YFFN Sbjct: 314 PERGDFDMRDVLESPYFFN 332 [15][TOP] >UniRef100_Q9XF15 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=Q9XF15_MAIZE Length = 975 Score = 136 bits (343), Expect = 1e-30 Identities = 60/79 (75%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHA DVDTMN+ILREKFVELY+TPILE+LL+SF++S+P L FPP+ Sbjct: 897 KRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPL 956 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFD+KEVL+S YFFN Sbjct: 957 PERGDFDMKEVLESTYFFN 975 [16][TOP] >UniRef100_Q84LK6 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group RepID=Q84LK6_ORYSJ Length = 1017 Score = 136 bits (343), Expect = 1e-30 Identities = 60/79 (75%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVDTMN+ILREKFVELY+TPILE+LL+SF++S+P L FPP+ Sbjct: 939 KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 998 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL +VL S YFFN Sbjct: 999 PERGDFDLTDVLGSPYFFN 1017 [17][TOP] >UniRef100_B4FGZ4 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=B4FGZ4_MAIZE Length = 323 Score = 136 bits (343), Expect = 1e-30 Identities = 60/79 (75%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHA DVDTMN+ILREKFVELY+TPILE+LL+SF++S+P L FPP+ Sbjct: 245 KRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPL 304 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFD+KEVL+S YFFN Sbjct: 305 PERGDFDMKEVLESTYFFN 323 [18][TOP] >UniRef100_A2YYV2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=A2YYV2_ORYSI Length = 845 Score = 136 bits (343), Expect = 1e-30 Identities = 60/79 (75%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVDTMN+ILREKFVELY+TPILE+LL+SF++S+P L FPP+ Sbjct: 767 KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 826 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL +VL S YFFN Sbjct: 827 PERGDFDLTDVLGSPYFFN 845 [19][TOP] >UniRef100_B9N1V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9N1V3_POPTR Length = 543 Score = 135 bits (341), Expect = 2e-30 Identities = 60/76 (78%), Positives = 70/76 (92%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+NFAGVHDSYWTHACDVD MNRILREKFVELY TPILE+LL+SF++S+P L FPP+P R Sbjct: 468 GLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDR 527 Query: 424 GDFDLKEVLKSQYFFN 377 GDF+L+EVL+S YFFN Sbjct: 528 GDFELREVLESPYFFN 543 [20][TOP] >UniRef100_B9N1V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N1V2_POPTR Length = 528 Score = 135 bits (341), Expect = 2e-30 Identities = 60/76 (78%), Positives = 70/76 (92%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+NFAGVHDSYWTHACDVD MNRILREKFVELY TPILE+LL+SF++S+P L FPP+P R Sbjct: 453 GLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDR 512 Query: 424 GDFDLKEVLKSQYFFN 377 GDF+L+EVL+S YFFN Sbjct: 513 GDFELREVLESPYFFN 528 [21][TOP] >UniRef100_A7PNA5 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PNA5_VITVI Length = 978 Score = 135 bits (340), Expect = 3e-30 Identities = 60/79 (75%), Positives = 71/79 (89%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+NFAGVHDSYWTHACDVD MNRILREKFVELY PILE+LL+ FQ+S+P L FPP+ Sbjct: 900 QKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPL 959 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 960 PERGDFDLREVLESPYFFN 978 [22][TOP] >UniRef100_Q93Y94 DNA-directed RNA polymerase 1, mitochondrial n=1 Tax=Nicotiana sylvestris RepID=RPOT1_NICSY Length = 1002 Score = 134 bits (336), Expect = 8e-30 Identities = 59/79 (74%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDSYWTHA DVD MN+ILREKFVELY+ PILE+LL+SFQ+S+P+L FPP+ Sbjct: 924 KESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 984 PERGDFDLREVLESPYFFN 1002 [23][TOP] >UniRef100_Q8L6J4 DNA-directed RNA polymerase 1A (Fragment) n=1 Tax=Nicotiana tabacum RepID=RPO1A_TOBAC Length = 155 Score = 134 bits (336), Expect = 8e-30 Identities = 59/79 (74%), Positives = 73/79 (92%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDSYWTHA DVD MN+ILREKFVELY+ PILE+LL+SFQ+S+P+L FPP+ Sbjct: 77 KESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 136 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 137 PERGDFDLREVLESPYFFN 155 [24][TOP] >UniRef100_B9RLF2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RLF2_RICCO Length = 997 Score = 132 bits (332), Expect = 2e-29 Identities = 58/79 (73%), Positives = 68/79 (86%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVD MNRILRE FVELY PILE+LL+ FQ+S+P L FPP+ Sbjct: 919 KHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYEAPILENLLEGFQKSFPKLKFPPL 978 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGDFDL++VL+S YFFN Sbjct: 979 PDRGDFDLRDVLESPYFFN 997 [25][TOP] >UniRef100_Q9MQV1 DNA-directed RNA polymerase n=1 Tax=Triticum aestivum RepID=Q9MQV1_WHEAT Length = 1005 Score = 132 bits (331), Expect = 3e-29 Identities = 57/79 (72%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+ FAGVHDSYWTHACDVDTMN+ILREKFVELY+ PILE+LL+SF+ S+P L FPP+ Sbjct: 927 KKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPL 986 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RG+FD+K+VL+S YFFN Sbjct: 987 PERGNFDMKDVLQSTYFFN 1005 [26][TOP] >UniRef100_Q70BU3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hordeum vulgare RepID=Q70BU3_HORVU Length = 862 Score = 132 bits (331), Expect = 3e-29 Identities = 57/79 (72%), Positives = 72/79 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G+ FAGVHDSYWTHACDVDTMN+ILREKFVELY+ PILE+LL+SF+ S+P L FPP+ Sbjct: 784 KKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPL 843 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RG+FD+K+VL+S YFFN Sbjct: 844 PERGNFDMKDVLQSTYFFN 862 [27][TOP] >UniRef100_A5CAT5 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5CAT5_VITVI Length = 305 Score = 131 bits (330), Expect = 4e-29 Identities = 59/79 (74%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHACDVD MNRILREKFVELY+ PILE+LL+SFQ S+P L FPP+ Sbjct: 227 RDAGLCFAGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLTFPPL 286 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RG+FDL+EVL+S YFFN Sbjct: 287 PDRGNFDLREVLESPYFFN 305 [28][TOP] >UniRef100_B4YPU8 DNA-directed RNA polymerase n=1 Tax=Brassica oleracea var. alboglabra RepID=B4YPU8_BRAOA Length = 951 Score = 130 bits (328), Expect = 7e-29 Identities = 56/76 (73%), Positives = 70/76 (92%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G++FAGVHDS+WTHACDV+ MN ILREKFVELY+ PILE+LL+SFQ+S+P L FPP+P+R Sbjct: 876 GLSFAGVHDSFWTHACDVELMNNILREKFVELYDKPILENLLESFQKSFPGLTFPPLPER 935 Query: 424 GDFDLKEVLKSQYFFN 377 GDFDL+EV++S YFFN Sbjct: 936 GDFDLREVIRSPYFFN 951 [29][TOP] >UniRef100_Q52GZ4 DNA-directed RNA polymerase n=1 Tax=Spinacia oleracea RepID=Q52GZ4_SPIOL Length = 1036 Score = 130 bits (326), Expect = 1e-28 Identities = 57/79 (72%), Positives = 69/79 (87%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+NFAGVHDSYWTHACDVD M+ ILREKFVELY+ PILE+LL++FQ+SYP L FPP+ Sbjct: 958 KHAGLNFAGVHDSYWTHACDVDQMSSILREKFVELYDQPILENLLETFQQSYPTLSFPPL 1017 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGDF+L++VL S YFFN Sbjct: 1018 PDRGDFELRDVLDSPYFFN 1036 [30][TOP] >UniRef100_B9N7P2 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9N7P2_POPTR Length = 847 Score = 130 bits (326), Expect = 1e-28 Identities = 57/79 (72%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+ FAGVHDSYWTHACDVD MNRILREKFVELY TPIL++LL+SFQ+S+P L FPP+ Sbjct: 769 KRAGLKFAGVHDSYWTHACDVDEMNRILREKFVELYETPILKNLLESFQKSFPTLSFPPL 828 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+ GDF+L++VL+S YFFN Sbjct: 829 PEWGDFELRQVLESPYFFN 847 [31][TOP] >UniRef100_A7PFM9 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PFM9_VITVI Length = 979 Score = 130 bits (326), Expect = 1e-28 Identities = 58/79 (73%), Positives = 70/79 (88%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHACDVD MN+ILREKFVELY+ PILE+LL+SFQ S+P L FPP+ Sbjct: 901 RDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPL 960 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RG+FDL+EVL+S YFFN Sbjct: 961 PDRGNFDLREVLESPYFFN 979 [32][TOP] >UniRef100_P92969 DNA-directed RNA polymerase 1, mitochondrial n=1 Tax=Arabidopsis thaliana RepID=RPOT1_ARATH Length = 976 Score = 129 bits (325), Expect = 1e-28 Identities = 56/76 (73%), Positives = 70/76 (92%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G++FAGVHDS+WTHACDVD MN ILREKFVELY PILE+LL+SFQ+S+P++ FPP+P+R Sbjct: 901 GLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPER 960 Query: 424 GDFDLKEVLKSQYFFN 377 GDFDL++VL+S YFFN Sbjct: 961 GDFDLRKVLESTYFFN 976 [33][TOP] >UniRef100_Q52GZ3 DNA-directed RNA polymerase n=1 Tax=Spinacia oleracea RepID=Q52GZ3_SPIOL Length = 989 Score = 129 bits (323), Expect = 2e-28 Identities = 57/79 (72%), Positives = 69/79 (87%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHACDV+ MN+ILR KFVELYN PILE+LL+SFQ +YP FPP+ Sbjct: 911 RDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESFQTAYPASTFPPL 970 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGDFDL+EVL+S YFFN Sbjct: 971 PERGDFDLEEVLESPYFFN 989 [34][TOP] >UniRef100_B9IMA6 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IMA6_POPTR Length = 882 Score = 128 bits (322), Expect = 3e-28 Identities = 58/79 (73%), Positives = 69/79 (87%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ G+ FAGVHDS+WTHA DVD MNRILREKFVELYN PILE+LL+ FQ SYP L FPP+ Sbjct: 804 RDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPL 863 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RG+FDL++VL+S YFFN Sbjct: 864 PERGNFDLQKVLRSPYFFN 882 [35][TOP] >UniRef100_Q8SBD4 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8SBD4_PHYPA Length = 1087 Score = 124 bits (311), Expect = 6e-27 Identities = 56/79 (70%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+ FAGVHDSYWTHA DV+ MN +LREKFVELY+ P+LE+LL+SFQE +P LVFP V Sbjct: 1009 QEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQERFPTLVFPEV 1068 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGD DLKEVL++ YFFN Sbjct: 1069 PARGDLDLKEVLRAPYFFN 1087 [36][TOP] >UniRef100_Q8L6F9 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8L6F9_PHYPA Length = 1087 Score = 124 bits (311), Expect = 6e-27 Identities = 56/79 (70%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+ FAGVHDSYWTHA DV+ MN +LREKFVELY+ P+LE+LL+SFQE +P LVFP V Sbjct: 1009 QEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQERFPTLVFPEV 1068 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGD DLKEVL++ YFFN Sbjct: 1069 PARGDLDLKEVLRAPYFFN 1087 [37][TOP] >UniRef100_A9TL52 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL52_PHYPA Length = 1088 Score = 124 bits (311), Expect = 6e-27 Identities = 56/79 (70%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+ FAGVHDSYWTHA DV+ MN +LREKFVELY+ P+LE+LL+SFQE +P LVFP V Sbjct: 1010 QEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQERFPTLVFPEV 1069 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGD DLKEVL++ YFFN Sbjct: 1070 PARGDLDLKEVLRAPYFFN 1088 [38][TOP] >UniRef100_Q9LFV6 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial n=1 Tax=Arabidopsis thaliana RepID=RPOT2_ARATH Length = 1011 Score = 123 bits (309), Expect = 1e-26 Identities = 55/79 (69%), Positives = 68/79 (86%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 + G+ FAGVHDS+WTHACDVD +N ILREKFVELY+ PILE+LL+SF++S+P+L FPP+ Sbjct: 933 KRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPL 992 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RGD DLK VL S YFFN Sbjct: 993 PERGDLDLKVVLDSPYFFN 1011 [39][TOP] >UniRef100_B9HB51 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HB51_POPTR Length = 982 Score = 123 bits (308), Expect = 1e-26 Identities = 56/79 (70%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ + FAGVHDS+WTHA D D MNRILREKFVELYN PILE+LL+ FQ SYP L FP + Sbjct: 904 RDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSL 963 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+RG+FDL+EVL+S YFFN Sbjct: 964 PERGNFDLQEVLRSPYFFN 982 [40][TOP] >UniRef100_Q67UP6 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group RepID=Q67UP6_ORYSJ Length = 806 Score = 122 bits (306), Expect = 2e-26 Identities = 53/79 (67%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 728 KKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPC 787 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +GDFD++EVL S YFFN Sbjct: 788 PSQGDFDVREVLASTYFFN 806 [41][TOP] >UniRef100_Q84LK5 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q84LK5_ORYSJ Length = 953 Score = 122 bits (306), Expect = 2e-26 Identities = 53/79 (67%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 875 KKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPC 934 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +GDFD++EVL S YFFN Sbjct: 935 PSQGDFDVREVLASTYFFN 953 [42][TOP] >UniRef100_B9FQ93 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FQ93_ORYSJ Length = 946 Score = 122 bits (306), Expect = 2e-26 Identities = 53/79 (67%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 868 KKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPC 927 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +GDFD++EVL S YFFN Sbjct: 928 PSQGDFDVREVLASTYFFN 946 [43][TOP] >UniRef100_A2YFP7 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=A2YFP7_ORYSI Length = 950 Score = 122 bits (306), Expect = 2e-26 Identities = 53/79 (67%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 872 KKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPC 931 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +GDFD++EVL S YFFN Sbjct: 932 PSQGDFDVREVLASTYFFN 950 [44][TOP] >UniRef100_Q9SYW4 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=Q9SYW4_MAIZE Length = 952 Score = 120 bits (302), Expect = 7e-26 Identities = 52/79 (65%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILR++FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 874 KESGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQTSFPTLEFPPC 933 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 934 PPQGNFDVREVLTSTYFFN 952 [45][TOP] >UniRef100_O82725 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=O82725_MAIZE Length = 952 Score = 120 bits (302), Expect = 7e-26 Identities = 52/79 (65%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILR++FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 874 KESGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQTSFPTLEFPPC 933 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 934 PPQGNFDVREVLTSTYFFN 952 [46][TOP] >UniRef100_Q1KUU5 Putative uncharacterized protein n=1 Tax=Cleome spinosa RepID=Q1KUU5_9ROSI Length = 1021 Score = 120 bits (301), Expect = 9e-26 Identities = 53/70 (75%), Positives = 64/70 (91%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 R+ GI FAGVHDSYWTHACDVD +NR LREKFVELY+ PILEDLL+SF++S+P+L FPP+ Sbjct: 917 RKAGICFAGVHDSYWTHACDVDELNRTLREKFVELYDKPILEDLLESFEKSFPHLSFPPL 976 Query: 433 PKRGDFDLKE 404 P+RGDFDL+E Sbjct: 977 PERGDFDLRE 986 [47][TOP] >UniRef100_O24216 Putative T3/T7-like RNA polymerase (Fragment) n=1 Tax=Oryza sativa RepID=O24216_ORYSA Length = 87 Score = 119 bits (299), Expect = 2e-25 Identities = 52/79 (65%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ G++FAGVHDS+W HACDVD MN+ILR +FVELY+ PILE+LL+ FQ S+P L FPP Sbjct: 9 KKAGLHFAGVHDSFWVHACDVDKMNQILRGQFVELYSMPILENLLKEFQTSFPTLEFPPC 68 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +GDFD++EVL S YFFN Sbjct: 69 PSQGDFDVREVLASTYFFN 87 [48][TOP] >UniRef100_Q70XR1 DNA-directed RNA polymerase n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q70XR1_HORVD Length = 948 Score = 118 bits (296), Expect = 3e-25 Identities = 51/79 (64%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ +P + FPP Sbjct: 870 KEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPC 929 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 930 PAQGNFDVREVLTSTYFFN 948 [49][TOP] >UniRef100_Q70XR0 DNA-directed RNA polymerase n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q70XR0_HORVD Length = 948 Score = 118 bits (296), Expect = 3e-25 Identities = 51/79 (64%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ +P + FPP Sbjct: 870 KEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPC 929 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 930 PAQGNFDVREVLTSTYFFN 948 [50][TOP] >UniRef100_Q41524 DNA-directed RNA polymerase n=1 Tax=Triticum aestivum RepID=Q41524_WHEAT Length = 949 Score = 118 bits (296), Expect = 3e-25 Identities = 51/79 (64%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ +P + FPP Sbjct: 871 KEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPC 930 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 931 PAQGNFDVREVLTSTYFFN 949 [51][TOP] >UniRef100_O23999 Putative T7/T3-like RNA polymerase (Fragment) n=1 Tax=Hordeum vulgare RepID=O23999_HORVU Length = 129 Score = 118 bits (296), Expect = 3e-25 Identities = 51/79 (64%), Positives = 66/79 (83%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILRE+FVELY+ PILE+LL+ FQ +P + FPP Sbjct: 51 KEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPC 110 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 111 PAQGNFDVREVLTSTYFFN 129 [52][TOP] >UniRef100_C5Z749 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Z749_SORBI Length = 960 Score = 118 bits (295), Expect = 4e-25 Identities = 50/79 (63%), Positives = 67/79 (84%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G++FAGVHDS+W HACDVD MN+ILR++FVELY+ PIL++LL+ FQ ++P L FPP Sbjct: 882 KEAGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILDNLLEEFQMAFPTLEFPPC 941 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G+FD++EVL S YFFN Sbjct: 942 PPQGNFDVREVLTSTYFFN 960 [53][TOP] >UniRef100_B2RFX8 DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=B2RFX8_9TRAC Length = 1002 Score = 117 bits (294), Expect = 6e-25 Identities = 55/79 (69%), Positives = 64/79 (81%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 +E G+ FAGVHDS+WTHA DV+ MN ILREKFVELY PILE+LL+SFQ+ +P L FP + Sbjct: 924 QEAGLTFAGVHDSFWTHAGDVERMNVILREKFVELYEQPILENLLESFQKRWPKLKFPDL 983 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RGD DLKEVL S YFFN Sbjct: 984 PVRGDLDLKEVLSSPYFFN 1002 [54][TOP] >UniRef100_Q8SBD3 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8SBD3_PHYPA Length = 1065 Score = 115 bits (289), Expect = 2e-24 Identities = 54/76 (71%), Positives = 61/76 (80%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ FAGVHDSYWTHA DV+ MN ILR+ FV+LY PILE+LL FQ +P+LVFP VP R Sbjct: 990 GLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPAR 1049 Query: 424 GDFDLKEVLKSQYFFN 377 GD DLKEVLKS YFFN Sbjct: 1050 GDLDLKEVLKSPYFFN 1065 [55][TOP] >UniRef100_Q8L6F8 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8L6F8_PHYPA Length = 1065 Score = 115 bits (289), Expect = 2e-24 Identities = 54/76 (71%), Positives = 61/76 (80%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ FAGVHDSYWTHA DV+ MN ILR+ FV+LY PILE+LL FQ +P+LVFP VP R Sbjct: 990 GLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPAR 1049 Query: 424 GDFDLKEVLKSQYFFN 377 GD DLKEVLKS YFFN Sbjct: 1050 GDLDLKEVLKSPYFFN 1065 [56][TOP] >UniRef100_A9TJW1 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJW1_PHYPA Length = 1065 Score = 115 bits (289), Expect = 2e-24 Identities = 54/76 (71%), Positives = 61/76 (80%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ FAGVHDSYWTHA DV+ MN ILR+ FV+LY PILE+LL FQ +P+LVFP VP R Sbjct: 990 GLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPAR 1049 Query: 424 GDFDLKEVLKSQYFFN 377 GD DLKEVLKS YFFN Sbjct: 1050 GDLDLKEVLKSPYFFN 1065 [57][TOP] >UniRef100_A9TJ21 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJ21_PHYPA Length = 861 Score = 114 bits (286), Expect = 5e-24 Identities = 51/78 (65%), Positives = 64/78 (82%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 + GI+FAGVHDS+WTHA DVD +N++ REKFVELY+ PILE+LL FQ Y +L FPPVP Sbjct: 784 QAGISFAGVHDSFWTHAGDVDVLNKLTREKFVELYSYPILENLLLGFQRRYADLTFPPVP 843 Query: 430 KRGDFDLKEVLKSQYFFN 377 +RG D++EVLK+ YFFN Sbjct: 844 ERGVLDIREVLKAPYFFN 861 [58][TOP] >UniRef100_A0CCN6 Chromosome undetermined scaffold_168, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CCN6_PARTE Length = 1035 Score = 110 bits (274), Expect = 1e-22 Identities = 47/75 (62%), Positives = 61/75 (81%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 GI FA VHDSYWTHAC+VD +N +LRE+FV L++ P+LEDL SFQ +P+L FPP+P+R Sbjct: 960 GITFAAVHDSYWTHACNVDKLNELLREQFVRLHSQPLLEDLRDSFQRRFPHLEFPPIPER 1019 Query: 424 GDFDLKEVLKSQYFF 380 G FDL++V +S YFF Sbjct: 1020 GQFDLEKVKQSVYFF 1034 [59][TOP] >UniRef100_Q0QFR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=Q0QFR1_ACACA Length = 512 Score = 108 bits (271), Expect = 3e-22 Identities = 46/77 (59%), Positives = 59/77 (76%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 E G+ +A VHDSYWTHA VDTMN ILR FV+L++ P+L+DLL F+ +YP + FPPVP Sbjct: 435 EAGLTYASVHDSYWTHASSVDTMNHILRRTFVDLHSQPLLDDLLAHFKRTYPGIEFPPVP 494 Query: 430 KRGDFDLKEVLKSQYFF 380 +GD DLKE++ S YFF Sbjct: 495 PKGDLDLKEIINSPYFF 511 [60][TOP] >UniRef100_Q010X3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q010X3_OSTTA Length = 973 Score = 104 bits (259), Expect = 7e-21 Identities = 46/80 (57%), Positives = 62/80 (77%), Gaps = 2/80 (2%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPP 437 + G+ FAGVHDS+WTHACD+DTMN+ILREKF+E+++ P+LE+L + +ESYP++ FP Sbjct: 894 DAGLTFAGVHDSFWTHACDIDTMNKILREKFIEVHSEPLLENLYEELRESYPDVADKFPR 953 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 PK GD DL V S YFF+ Sbjct: 954 PPKPGDLDLNVVRDSVYFFS 973 [61][TOP] >UniRef100_Q0QFS4 DNA-directed RNA polymerase n=1 Tax=Rosculus sp. ATCC 50888 RepID=Q0QFS4_9EUKA Length = 1285 Score = 103 bits (258), Expect = 9e-21 Identities = 46/76 (60%), Positives = 58/76 (76%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 GI F+ VHDSYWTH DVD MN +LR++F+ LY+ P+LEDL +SF YP FPP+P+R Sbjct: 1210 GIVFSSVHDSYWTHPGDVDKMNALLRDRFIHLYSGPVLEDLRESFVLRYPTAEFPPLPER 1269 Query: 424 GDFDLKEVLKSQYFFN 377 G+ DL+EV KS YFFN Sbjct: 1270 GNLDLEEVRKSPYFFN 1285 [62][TOP] >UniRef100_Q0QFS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stygamoeba sp. ruffled RepID=Q0QFS1_9EUKA Length = 661 Score = 103 bits (257), Expect = 1e-20 Identities = 46/78 (58%), Positives = 61/78 (78%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 + G FA VHDSYWTHA VD MN+ILR+KFV++++ P+LE+LL SF+ +YPN+ FP VP Sbjct: 584 DQGYTFASVHDSYWTHARTVDPMNQILRQKFVDMHSEPLLENLLASFRRNYPNVDFPDVP 643 Query: 430 KRGDFDLKEVLKSQYFFN 377 K D DL +VL+S YFF+ Sbjct: 644 KSHDLDLSQVLESPYFFH 661 [63][TOP] >UniRef100_B7GAR6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAR6_PHATR Length = 576 Score = 100 bits (250), Expect = 7e-20 Identities = 42/75 (56%), Positives = 58/75 (77%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ F+ VHDS+WTHACD+D MN LR+ FV+LY+ P+LE L Q+++ YP L FP +PKR Sbjct: 501 GLTFSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKR 560 Query: 424 GDFDLKEVLKSQYFF 380 GD +L EV +++YFF Sbjct: 561 GDLNLAEVKQAKYFF 575 [64][TOP] >UniRef100_B7GAR5 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAR5_PHATR Length = 1188 Score = 100 bits (250), Expect = 7e-20 Identities = 42/75 (56%), Positives = 58/75 (77%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ F+ VHDS+WTHACD+D MN LR+ FV+LY+ P+LE L Q+++ YP L FP +PKR Sbjct: 1113 GLTFSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKR 1172 Query: 424 GDFDLKEVLKSQYFF 380 GD +L EV +++YFF Sbjct: 1173 GDLNLAEVKQAKYFF 1187 [65][TOP] >UniRef100_B8BVD8 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BVD8_THAPS Length = 1217 Score = 99.0 bits (245), Expect = 3e-19 Identities = 41/75 (54%), Positives = 57/75 (76%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G++F+ VHDSYWTH CDV+ MN ILRE F++LY+ P+LEDL S++ YP++ FP VP + Sbjct: 1142 GLHFSAVHDSYWTHPCDVEEMNDILRECFIDLYSQPLLEDLKDSWELRYPSITFPDVPTK 1201 Query: 424 GDFDLKEVLKSQYFF 380 G+ DL +V + YFF Sbjct: 1202 GELDLNDVKSAPYFF 1216 [66][TOP] >UniRef100_Q0QFS5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polysphondylium pallidum RepID=Q0QFS5_POLPA Length = 862 Score = 98.2 bits (243), Expect = 5e-19 Identities = 44/79 (55%), Positives = 57/79 (72%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ GI FA VHDS+WTHA +DTMN +LR +FVEL++ PILE L + F YP + PPV Sbjct: 784 KKKGITFASVHDSFWTHASTIDTMNTMLRHQFVELHSQPILERLREWFNHRYPTVNIPPV 843 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P RG DLK+V S+YFF+ Sbjct: 844 PNRGSLDLKKVRDSKYFFH 862 [67][TOP] >UniRef100_Q95NZ8 DNA-directed RNA polymerase n=1 Tax=Dictyostelium discoideum RepID=Q95NZ8_DICDI Length = 950 Score = 97.8 bits (242), Expect = 6e-19 Identities = 43/78 (55%), Positives = 59/78 (75%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 + GI ++ VHDSYWTHA VD MN ILR +FVEL+ PILE LL+ FQ YP++ FP +P Sbjct: 873 DQGITYSSVHDSYWTHASTVDRMNDILRNEFVELHKQPILERLLEWFQVRYPDIKFPKLP 932 Query: 430 KRGDFDLKEVLKSQYFFN 377 K+G+ D+ +V +S+YFF+ Sbjct: 933 KKGELDINKVKESRYFFH 950 [68][TOP] >UniRef100_Q0R0H7 DNA-directed RNA polymerase n=1 Tax=Naegleria sp. TES-2005 RepID=Q0R0H7_9EUKA Length = 968 Score = 95.1 bits (235), Expect = 4e-18 Identities = 40/76 (52%), Positives = 57/76 (75%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 GI FA VHDS+W +A +VD MN+I+RE+F+ L++ P+LE+L +F YPN+ FPP+PK+ Sbjct: 893 GIEFAAVHDSFWCNAGNVDRMNKIIREQFINLHSQPLLEELYATFTRLYPNIQFPPLPKK 952 Query: 424 GDFDLKEVLKSQYFFN 377 G DL VL + YFF+ Sbjct: 953 GTLDLNRVLDAPYFFD 968 [69][TOP] >UniRef100_A4S334 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S334_OSTLU Length = 922 Score = 94.4 bits (233), Expect = 7e-18 Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 2/80 (2%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPP 437 + G+ FAGVHDS+WTHA DVDTMN ILREKF+E++ P+LE+L F+ +YP++ FP Sbjct: 843 DAGLTFAGVHDSFWTHATDVDTMNVILREKFIEVHKEPLLENLYHEFRANYPDVADEFPQ 902 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 P GD DL V S YFF+ Sbjct: 903 PPAPGDLDLDVVQDSVYFFS 922 [70][TOP] >UniRef100_O13993 DNA-directed RNA polymerase, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RPOM_SCHPO Length = 1120 Score = 92.4 bits (228), Expect = 3e-17 Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 26/104 (25%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQE----------- 464 E INFA VHDSYWTHACDVD MN +LRE FV L++ I+E L Q F+E Sbjct: 1017 EQNINFAAVHDSYWTHACDVDQMNSLLREAFVLLHSNNIMERLKQEFEERYKGFLVSKKA 1076 Query: 463 ---------------SYPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 SY L FPP+P RG DLK+VL+S+YFF+ Sbjct: 1077 IKANDEDLKAKFGNKSYIPLEFPPLPARGALDLKKVLESKYFFS 1120 [71][TOP] >UniRef100_Q0QFS0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paravahlkampfia sp. LA RepID=Q0QFS0_9EUKA Length = 400 Score = 90.5 bits (223), Expect = 1e-16 Identities = 36/79 (45%), Positives = 59/79 (74%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 ++ I+FA VHDS+W HA +VD MN +R++F+EL++ P+LE LL +F+ +P++ FPPV Sbjct: 322 KDDNISFASVHDSFWCHAQNVDRMNNHIRKQFIELHSQPLLETLLNTFKRMHPDVRFPPV 381 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P +G DL ++ ++YFF+ Sbjct: 382 PPKGSLDLNRIMHAKYFFD 400 [72][TOP] >UniRef100_A7AMS9 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AMS9_BABBO Length = 1088 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PNLVFPPVPK 428 G +FA VHDSYWTHACDVD MN+ +RE+FV++YN PILE+L QS + + PP P Sbjct: 1012 GFSFAAVHDSYWTHACDVDIMNKAIREQFVKMYNEPILENLYQSCNKRLRGEVTIPPPPP 1071 Query: 427 RGDFDLKEVLKSQYFFN 377 RG DL+ V S YFF+ Sbjct: 1072 RGRLDLELVKDSVYFFH 1088 [73][TOP] >UniRef100_Q239M6 DNA-dependent RNA polymerase family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q239M6_TETTH Length = 1410 Score = 89.7 bits (221), Expect = 2e-16 Identities = 36/60 (60%), Positives = 50/60 (83%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G++FA VHDSYWTHACD++ M++ILRE+FV+L++ P+LEDL SF+ YPN+ FP +P R Sbjct: 1187 GMHFAAVHDSYWTHACDIEEMHKILREQFVKLHSQPLLEDLKASFERRYPNIEFPEIPNR 1246 [74][TOP] >UniRef100_Q2XSM7 DNA-directed RNA polymerase n=1 Tax=Physarum polycephalum RepID=Q2XSM7_PHYPO Length = 997 Score = 88.6 bits (218), Expect = 4e-16 Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY---PNLVF 443 ++ GI++ VHDSYWTHAC VD MN ILR++FVEL++ P+L L + F + Y + F Sbjct: 916 QKKGISYTSVHDSYWTHACTVDQMNVILRDQFVELHSQPLLHRLREWFIKRYGKDGRVEF 975 Query: 442 PPVPKRGDFDLKEVLKSQYFFN 377 PPVP+RG DL+ V +S+YFF+ Sbjct: 976 PPVPERGPLDLQVVKQSKYFFH 997 [75][TOP] >UniRef100_C1EB37 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1EB37_9CHLO Length = 899 Score = 87.8 bits (216), Expect = 6e-16 Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 2/80 (2%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPP 437 E G+ FAGVHDS+WTHA DV M+R +REKF+EL++ P+LE L + +E YP + PP Sbjct: 820 EAGLTFAGVHDSFWTHAGDVPEMSRHIREKFIELHSEPLLEMLYEELKEKYPEVAHEIPP 879 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 P G+ D+++V S YFF+ Sbjct: 880 PPPMGNMDIEQVKDSIYFFS 899 [76][TOP] >UniRef100_Q7RAE1 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RAE1_PLAYO Length = 697 Score = 87.4 bits (215), Expect = 8e-16 Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 2/76 (2%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKR 425 +FA VHDSYWTHAC+VD MN+ +R+ FV LYN PILE++ Q+FQ PP P++ Sbjct: 622 SFAAVHDSYWTHACNVDIMNKFIRDSFVTLYNKPILENIYQNFQMRLGKFAEKIPPPPEQ 681 Query: 424 GDFDLKEVLKSQYFFN 377 G D+ V SQYFF+ Sbjct: 682 GHLDISLVRHSQYFFS 697 [77][TOP] >UniRef100_Q0QFS2 Mitochondrial single-subunit RNA polymerase (Fragment) n=1 Tax=Planoprotostelium sp. ATCC 50597 RepID=Q0QFS2_9MYCE Length = 297 Score = 86.3 bits (212), Expect = 2e-15 Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 3/82 (3%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY---PNLVF 443 ++ I +A VHDSYWTHAC VD M++ILR++FVEL++ P+L L + F + Y + F Sbjct: 216 KKHNIAYASVHDSYWTHACTVDHMSKILRDQFVELHSQPLLHRLREWFIKRYGKDGRVEF 275 Query: 442 PPVPKRGDFDLKEVLKSQYFFN 377 PPVP+RG DL+ V +S+YFF+ Sbjct: 276 PPVPERGPLDLQVVKQSKYFFH 297 [78][TOP] >UniRef100_C1MV11 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MV11_9CHLO Length = 838 Score = 85.9 bits (211), Expect = 2e-15 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPK 428 I FAGVHDS+WTHA DVD MN ++R+ FVEL++ P++ L + +E+YP P P Sbjct: 762 IAFAGVHDSFWTHARDVDAMNEVIRDTFVELHSEPLMTTLYEELRETYPEAADEIPKPPP 821 Query: 427 RGDFDLKEVLKSQYFFN 377 G+ DL EV KS+YFF+ Sbjct: 822 LGELDLNEVKKSRYFFS 838 [79][TOP] >UniRef100_A7RKW2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RKW2_NEMVE Length = 686 Score = 85.1 bits (209), Expect = 4e-15 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 17/92 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY----------- 458 GINFA VHDS+WTHA +D MNR+ RE+FV L+ PIL+DL F ++Y Sbjct: 594 GINFASVHDSFWTHAAHIDIMNRLCREQFVSLHTQPILQDLQTHFVDNYGGLKFMRPLKK 653 Query: 457 ------PNLVFPPVPKRGDFDLKEVLKSQYFF 380 N F +P+ GDFD+ EVL S YFF Sbjct: 654 KDHAPIHNATFEGLPEIGDFDVSEVLDSTYFF 685 [80][TOP] >UniRef100_Q4Z4B5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4Z4B5_PLABE Length = 845 Score = 84.7 bits (208), Expect = 5e-15 Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 2/76 (2%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKR 425 +FA VHDSYWTHAC+VD MN+ +R+ FV LYN PILE++ Q+FQ PP P++ Sbjct: 770 SFAAVHDSYWTHACNVDIMNKFIRDSFVTLYNKPILENIYQNFQMRLGKYAEKIPPPPEQ 829 Query: 424 GDFDLKEVLKSQYFFN 377 G D+ V S+YFF+ Sbjct: 830 GYLDISLVRDSKYFFS 845 [81][TOP] >UniRef100_C3Y2C4 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3Y2C4_BRAFL Length = 804 Score = 84.3 bits (207), Expect = 7e-15 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 19/98 (19%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL----- 449 ++ GI + VHD +WTHAC VDTMNRI RE+FV L++ PILEDL + + Y +L Sbjct: 707 QQAGIQYVSVHDCFWTHACTVDTMNRICREQFVSLHSQPILEDLSKYLLKEYGSLSPELQ 766 Query: 448 --------------VFPPVPKRGDFDLKEVLKSQYFFN 377 V VP +G+FDL+ VL S YFF+ Sbjct: 767 TSPTAVSKHDKLMEVLVDVPPKGEFDLRRVLDSTYFFS 804 [82][TOP] >UniRef100_UPI0001924CEB PREDICTED: similar to polymerase (RNA) mitochondrial (DNA directed), partial n=1 Tax=Hydra magnipapillata RepID=UPI0001924CEB Length = 420 Score = 84.0 bits (206), Expect = 9e-15 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 12/87 (13%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL--------- 449 + FA VHDS+WTHACD+D +N R++FV L+ PILEDL F + L Sbjct: 334 MTFASVHDSFWTHACDIDKLNEFCRQEFVHLHELPILEDLKNHFDRKFSGLPLRKAVHGS 393 Query: 448 ---VFPPVPKRGDFDLKEVLKSQYFFN 377 F P+PK G FD+++VL S YFF+ Sbjct: 394 SVASFNPLPKPGTFDVRQVLNSTYFFS 420 [83][TOP] >UniRef100_Q1LXT3 DNA-directed RNA polymerase (Fragment) n=2 Tax=Danio rerio RepID=Q1LXT3_DANRE Length = 1234 Score = 84.0 bits (206), Expect = 9e-15 Identities = 40/76 (52%), Positives = 51/76 (67%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ F VHD YWTHA VD MNR+ RE+FV L++ PILE+L + Y PPVP+ Sbjct: 1161 GLTFVSVHDCYWTHAVTVDIMNRVCREQFVALHSQPILEELSWFLLQKYSRR--PPVPQT 1218 Query: 424 GDFDLKEVLKSQYFFN 377 GDFDL++V S YFF+ Sbjct: 1219 GDFDLEKVKDSVYFFS 1234 [84][TOP] >UniRef100_Q17K00 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q17K00_AEDAE Length = 1271 Score = 82.8 bits (203), Expect = 2e-14 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 G+ F VHD YWTHAC V TMN+I RE+FV L++ PILEDL + + Y Sbjct: 1176 GLTFISVHDCYWTHACTVPTMNKICREQFVALHSEPILEDLSKFLVQKYSYNESEITNDG 1235 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + P +GDFDL++VLKS YFF+ Sbjct: 1236 SVIDLTKRKLNRILHQYPDKGDFDLRQVLKSVYFFS 1271 [85][TOP] >UniRef100_B3L558 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L558_PLAKH Length = 1348 Score = 81.3 bits (199), Expect = 6e-14 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPP 437 E +FA VHDSYW HAC+VD MN+ +R+ FV LYN PIL++L QS+Q P Sbjct: 1269 ENNFSFAAVHDSYWAHACNVDLMNKFIRDSFVTLYNEPILQNLYQSYQMRLGKYASRIPA 1328 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 P++G D+ V S+YFF+ Sbjct: 1329 PPEQGHLDVSLVRNSRYFFS 1348 [86][TOP] >UniRef100_C5KD29 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KD29_9ALVE Length = 1162 Score = 80.1 bits (196), Expect = 1e-13 Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 2/78 (2%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQ--SFQESYPNLVFPPVP 431 G+ FA VHDSYWTHACDVD +N I+R+ FV+L+N PIL++L + S + + P +P Sbjct: 1085 GLAFAAVHDSYWTHACDVDELNTIIRDMFVKLHNEPILDNLYRDLSIMLGVNSFLLPELP 1144 Query: 430 KRGDFDLKEVLKSQYFFN 377 RG+ L V +S +FF+ Sbjct: 1145 GRGNLQLDRVRESAFFFD 1162 [87][TOP] >UniRef100_B0W1Q8 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0W1Q8_CULQU Length = 1308 Score = 80.1 bits (196), Expect = 1e-13 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 G+ F VHD YWTHAC V TMN+I RE+FV L++ PILEDL + + Y Sbjct: 1213 GLTFISVHDCYWTHACTVATMNKICREQFVALHSEPILEDLSKFLVQKYSYDENEITNDG 1272 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + P +GDFDL+ VL S YFF+ Sbjct: 1273 SVIDLTKRKLNRILQQYPDKGDFDLRRVLNSVYFFS 1308 [88][TOP] >UniRef100_UPI000186D3DE DNA-directed RNA polymerase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D3DE Length = 1102 Score = 79.7 bits (195), Expect = 2e-13 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 9/87 (10%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN------- 452 + + FA +HD YWTHAC VD MN+ R +FV L++ PIL+DL F + Y Sbjct: 1016 QSNLTFASIHDCYWTHACTVDEMNKYCRRQFVALHSQPILKDLSDFFVDVYVKDEKKDAE 1075 Query: 451 --LVFPPVPKRGDFDLKEVLKSQYFFN 377 VF VP+ GDFDL V+ S YFF+ Sbjct: 1076 ALKVFKRVPQTGDFDLNSVIDSVYFFS 1102 [89][TOP] >UniRef100_B9PQ14 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PQ14_TOXGO Length = 2101 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = -3 Query: 595 FAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKRG 422 FA VHDSYWTHA DVD M ILR++FV LY+ PILE+ + + PP P +G Sbjct: 2027 FAAVHDSYWTHAGDVDRMRTILRQEFVRLYSQPILEEFYEGLRARLGRFAEDLPPPPTKG 2086 Query: 421 DFDLKEVLKSQYFFN 377 D+ EVL S YFF+ Sbjct: 2087 SLDITEVLHSDYFFH 2101 [90][TOP] >UniRef100_B6KGP1 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii RepID=B6KGP1_TOXGO Length = 2084 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = -3 Query: 595 FAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKRG 422 FA VHDSYWTHA DVD M ILR++FV LY+ PILE+ + + PP P +G Sbjct: 2010 FAAVHDSYWTHAGDVDRMRTILRQEFVRLYSQPILEEFYEGLRARLGRFAEDLPPPPTKG 2069 Query: 421 DFDLKEVLKSQYFFN 377 D+ EVL S YFF+ Sbjct: 2070 SLDITEVLHSDYFFH 2084 [91][TOP] >UniRef100_UPI000180B22F PREDICTED: similar to RNA polymerase n=1 Tax=Ciona intestinalis RepID=UPI000180B22F Length = 1114 Score = 79.0 bits (193), Expect = 3e-13 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILE----------------DLLQS 473 GI F+ VHD YWTHACDVD MN I RE+FV+L++ PILE D+ + Sbjct: 1023 GIKFSAVHDCYWTHACDVDIMNVICREQFVKLHSQPILEKLASHLKKFLKPAEPHDITNT 1082 Query: 472 FQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 QE + VP +GDFDL +V S +FF+ Sbjct: 1083 LQEELLLSLLNNVPTKGDFDLNQVKNSVFFFS 1114 [92][TOP] >UniRef100_UPI00017B40E6 UPI00017B40E6 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B40E6 Length = 1013 Score = 78.6 bits (192), Expect = 4e-13 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 14/90 (15%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ F VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S PN Sbjct: 924 GLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLRKYCTSLPNKKYQE 983 Query: 451 -----LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 984 CRRLMLLLAKVPQTGDFDLQRVKESTYFFS 1013 [93][TOP] >UniRef100_Q0QFS6 DNA-directed RNA polymerase n=1 Tax=Hartmannella vermiformis RepID=Q0QFS6_HARVE Length = 992 Score = 78.6 bits (192), Expect = 4e-13 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRG 422 I +A VHDS+WTH VD MN ILREKFV+L+ PIL+ L + + ++P++ P +P G Sbjct: 918 ITYASVHDSFWTHPATVDDMNTILREKFVQLHGRPILKQLREYWTTTHPDIKSPELPALG 977 Query: 421 DFDLKEVLKSQYFFN 377 F+L V +S YFF+ Sbjct: 978 KFNLHLVKESPYFFH 992 [94][TOP] >UniRef100_UPI0000D56B93 PREDICTED: similar to CG4644 CG4644-PA, partial n=1 Tax=Tribolium castaneum RepID=UPI0000D56B93 Length = 1176 Score = 78.2 bits (191), Expect = 5e-13 Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD YWTH VD MN+I RE+FV L++ PILE+L E Y Sbjct: 1081 GITFVSVHDCYWTHPSTVDIMNKICREQFVALHSLPILENLSMFLTEKYSFRNDDLIGDG 1140 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N V +PK GDFD+ +VLKS YFF+ Sbjct: 1141 SISDLTKTKLNKVLRKLPKTGDFDITQVLKSVYFFS 1176 [95][TOP] >UniRef100_B6K333 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K333_SCHJY Length = 1169 Score = 78.2 bits (191), Expect = 5e-13 Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 34/113 (30%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN------ 452 ++ I F VHDSYWTHA V +N +LRE FVEL++ IL DL + F++ Y N Sbjct: 1057 KKRNITFVSVHDSYWTHAASVAELNGLLREAFVELHSRDILGDLKREFEDRYKNHYVHNH 1116 Query: 451 ----------------------------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L FP VP+RG FD++ VL SQYFF+ Sbjct: 1117 YPVDSPAGQYLLQQGATAKRSVVKGWAPLTFPEVPERGTFDIRSVLHSQYFFS 1169 [96][TOP] >UniRef100_Q9GZ07 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum RepID=Q9GZ07_PLAFA Length = 1503 Score = 77.8 bits (190), Expect = 7e-13 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKR 425 +FA VHDSYW HAC+VD MN+ +RE F+ LYN PILE++ +F+ P P++ Sbjct: 1428 SFAAVHDSYWAHACNVDIMNQFIRESFITLYNEPILENIYNNFRIRLGKFATKIPSSPEQ 1487 Query: 424 GDFDLKEVLKSQYFFN 377 G+ D+ V S YFF+ Sbjct: 1488 GELDISMVKDSLYFFS 1503 [97][TOP] >UniRef100_Q8IIB0 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IIB0_PLAF7 Length = 1531 Score = 77.8 bits (190), Expect = 7e-13 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPPVPKR 425 +FA VHDSYW HAC+VD MN+ +RE F+ LYN PILE++ +F+ P P++ Sbjct: 1456 SFAAVHDSYWAHACNVDIMNQFIRESFITLYNEPILENIYNNFRIRLGKFATKIPSSPEQ 1515 Query: 424 GDFDLKEVLKSQYFFN 377 G+ D+ V S YFF+ Sbjct: 1516 GELDISMVKDSLYFFS 1531 [98][TOP] >UniRef100_B4KET7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KET7_DROMO Length = 1366 Score = 77.8 bits (190), Expect = 7e-13 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHAC V +NRI RE+FV L++ PILE L + +++Y Sbjct: 1271 GITFVSVHDCFWTHACTVPELNRICREQFVALHSQPILEQLSEFMKKTYSFSNAELTNDG 1330 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + +P++GDFDL+ VL S YFF+ Sbjct: 1331 SVEDLSKRQLNRILRQLPQKGDFDLRNVLDSVYFFS 1366 [99][TOP] >UniRef100_UPI00015B4477 PREDICTED: similar to conserved hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B4477 Length = 519 Score = 76.6 bits (187), Expect = 1e-12 Identities = 41/98 (41%), Positives = 51/98 (52%), Gaps = 22/98 (22%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD YWTH C D MN+I RE+FV L++ PILEDL + E + Sbjct: 422 GITFVSVHDCYWTHPCTADIMNKICREQFVALHSEPILEDLSKFLIEKFGFDDTDVLEKN 481 Query: 454 ------------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N VP++G+FDLK VL S YFF+ Sbjct: 482 KNIDIGILRDKLNSTLSKVPQQGNFDLKGVLSSTYFFS 519 [100][TOP] >UniRef100_B4LUB0 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4LUB0_DROVI Length = 1374 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHAC V +NR RE+FV L++ PILE L + +++Y Sbjct: 1279 GITFVSVHDCFWTHACTVPELNRACREQFVALHSQPILEQLSEFMRKTYSFRDNDFTNDG 1338 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + +P++GDFDL++VL S YFF+ Sbjct: 1339 SVEDLSKRQLNRILRQLPQKGDFDLRQVLDSVYFFS 1374 [101][TOP] >UniRef100_Q95WT2 RNA polymerase n=1 Tax=Trypanosoma brucei RepID=Q95WT2_9TRYP Length = 1274 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ T++R+LRE+FV LY L +L + ++E+Y V Sbjct: 1192 GLSMMAVHDSYWTYACDLPTLSRVLREQFVTLYGKYDPLWELKEQWEEAYFMDLRRHGKV 1251 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1252 LPDPPKRGDLDLNVVLNSPYFFS 1274 [102][TOP] >UniRef100_D0A783 Mitochondrial DNA-directed RNA polymerase, putative n=2 Tax=Trypanosoma brucei RepID=D0A783_TRYBG Length = 1317 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ T++R+LRE+FV LY L +L + ++E+Y V Sbjct: 1235 GLSMMAVHDSYWTYACDLPTLSRVLREQFVTLYGKYDPLWELKEQWEEAYFMDLRRHGKV 1294 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1295 LPDPPKRGDLDLNVVLNSPYFFS 1317 [103][TOP] >UniRef100_UPI0000E4769F PREDICTED: similar to RNA polymerase, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4769F Length = 383 Score = 75.5 bits (184), Expect = 3e-12 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL-------- 449 GI FA VHD YWTHA V+ MN+I R +FV+L+ PIL++L + E Y L Sbjct: 288 GIAFASVHDCYWTHASSVNQMNKICRSQFVKLHKEPILDNLSEFMVEKYGQLDMQDTSKL 347 Query: 448 ------------VFPPVPKRGDFDLKEVLKSQYFFN 377 VP++GDFDL VLKS YFF+ Sbjct: 348 KRGSRNMKILEDYIKIVPEKGDFDLDNVLKSTYFFS 383 [104][TOP] >UniRef100_UPI00016E8465 UPI00016E8465 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E8465 Length = 1191 Score = 75.5 bits (184), Expect = 3e-12 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 14/90 (15%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYP------ 455 G+ + VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P Sbjct: 1102 GLTYVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLEKYCSSLPTKKYQE 1161 Query: 454 ----NLVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 1162 YRKLRLLLANVPQTGDFDLQRVKESTYFFS 1191 [105][TOP] >UniRef100_A8PG00 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PG00_BRUMA Length = 1129 Score = 75.5 bits (184), Expect = 3e-12 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 16/95 (16%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PN----- 452 R GI FA VHD YWTHAC+VD MN+I RE+FV L++ P+++ + F++ Y PN Sbjct: 1035 RRLGITFAAVHDCYWTHACEVDEMNKICREQFVHLHSEPLVKQCAEFFRQKYLPNWLRTV 1094 Query: 451 ----------LVFPPVPKRGDFDLKEVLKSQYFFN 377 +F P ++G DL V S YFF+ Sbjct: 1095 MLTEEFQELRKIFTPKVRQGVLDLDAVRHSTYFFS 1129 [106][TOP] >UniRef100_UPI0000DB74DB PREDICTED: similar to CG4644-PA, partial n=1 Tax=Apis mellifera RepID=UPI0000DB74DB Length = 840 Score = 75.1 bits (183), Expect = 4e-12 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 5/80 (6%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQ---SFQESYPNL--VFPP 437 I F VHD +WTH C VD MN+I RE+FV L++ PILEDL + +++ + Sbjct: 761 ITFVSVHDCFWTHPCTVDAMNKICREQFVTLHSNPILEDLSKLELNYETDLKKIHKCLSN 820 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 +P +G FD+ VL S YFFN Sbjct: 821 IPSKGTFDIHNVLSSTYFFN 840 [107][TOP] >UniRef100_UPI00017B40E5 UPI00017B40E5 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B40E5 Length = 1014 Score = 75.1 bits (183), Expect = 4e-12 Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ F VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P+ Sbjct: 921 GLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLRKYCTSLPSEARNK 980 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 981 KYQECRRLMLLLAKVPQTGDFDLQRVKESTYFFS 1014 [108][TOP] >UniRef100_Q4SDA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SDA8_TETNG Length = 810 Score = 75.1 bits (183), Expect = 4e-12 Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ F VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P+ Sbjct: 717 GLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLRKYCTSLPSEARNK 776 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 777 KYQECRRLMLLLAKVPQTGDFDLQRVKESTYFFS 810 [109][TOP] >UniRef100_C4QAL4 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QAL4_SCHMA Length = 976 Score = 75.1 bits (183), Expect = 4e-12 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 21/97 (21%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI FA VHD +WTHA VD +NRI RE+F+ L++ PIL D ++ + Sbjct: 880 GIVFASVHDCFWTHAATVDKLNRICREEFIALHSQPILSDFADYVKQRFGYTDKQINEFK 939 Query: 454 -----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + +PKRG FDL EV+K++YFF+ Sbjct: 940 NGKKREQALAFNRLLSNLPKRGSFDLSEVMKAEYFFS 976 [110][TOP] >UniRef100_A5K4R4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K4R4_PLAVI Length = 1306 Score = 75.1 bits (183), Expect = 4e-12 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV--FPP 437 E +FA VHDSYWTHAC+VD MN +R+ FV LY PIL++L + +Q P Sbjct: 1227 ENNFSFAAVHDSYWTHACNVDQMNVFIRDSFVTLYEEPILQNLYRGYQMRLGKHASRIPA 1286 Query: 436 VPKRGDFDLKEVLKSQYFFN 377 P +G D+ V +S+YFF+ Sbjct: 1287 PPDQGHLDVSLVRRSRYFFS 1306 [111][TOP] >UniRef100_C5DNP3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DNP3_LACTC Length = 1289 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN-LVFPPV 434 E G++FA VHDSYWTHACDVDTMN +LRE+F++L+ ++E L F E Y N L + Sbjct: 1120 EKGLDFAAVHDSYWTHACDVDTMNVVLREQFIKLHEVDLIERLKDEFDERYKNYLQILKI 1179 Query: 433 PKRGDFDLK 407 K+ + +K Sbjct: 1180 DKKSEVAMK 1188 [112][TOP] >UniRef100_UPI00016E8463 UPI00016E8463 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E8463 Length = 1228 Score = 74.7 bits (182), Expect = 6e-12 Identities = 34/76 (44%), Positives = 50/76 (65%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ + VHD +WTHA VDTMN++ RE+FV L++ PIL++L E Y + + P+ Sbjct: 1155 GLTYVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLEKYCSSL--PISTT 1212 Query: 424 GDFDLKEVLKSQYFFN 377 DFDL+ V +S YFF+ Sbjct: 1213 SDFDLQRVKESTYFFS 1228 [113][TOP] >UniRef100_A8IA13 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IA13_CHLRE Length = 311 Score = 74.7 bits (182), Expect = 6e-12 Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPIL----EDLLQSFQESYPNLV 446 RE G FA VHDSYWTHA VD MN+ +R+ FV+L+ P+L +LL++ + S Sbjct: 229 REAGACFAAVHDSYWTHAASVDLMNKAIRDTFVQLHERPLLHELRRELLRNPEYSGATAA 288 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P VP G DL V +S YFF+ Sbjct: 289 LPRVPAPGQLDLSVVRQSTYFFS 311 [114][TOP] >UniRef100_UPI0001A2C079 Novel protein similar to vertebrate polymerase (RNA) mitochondrial (DNA directed) (POLRMT) n=1 Tax=Danio rerio RepID=UPI0001A2C079 Length = 1234 Score = 74.3 bits (181), Expect = 7e-12 Identities = 37/76 (48%), Positives = 48/76 (63%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ F VHD YWTHA VD MNR+ RE+FV L++ PILE+L + Y PP+ Sbjct: 1161 GLTFVSVHDCYWTHAVTVDIMNRVCREQFVALHSQPILEELSWFLLQKYSRR--PPLIDY 1218 Query: 424 GDFDLKEVLKSQYFFN 377 DFDL++V S YFF+ Sbjct: 1219 CDFDLEKVKDSVYFFS 1234 [115][TOP] >UniRef100_UPI00016E848E UPI00016E848E related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E848E Length = 810 Score = 74.3 bits (181), Expect = 7e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ + VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P+ Sbjct: 717 GLTYVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLEKYCSSLPSDTRTK 776 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 777 KYQEYRKLRLLLANVPQTGDFDLQRVKESTYFFS 810 [116][TOP] >UniRef100_UPI00016E848D UPI00016E848D related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E848D Length = 1115 Score = 74.3 bits (181), Expect = 7e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ + VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P+ Sbjct: 1022 GLTYVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLEKYCSSLPSDTRTK 1081 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 1082 KYQEYRKLRLLLANVPQTGDFDLQRVKESTYFFS 1115 [117][TOP] >UniRef100_UPI00016E8464 UPI00016E8464 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E8464 Length = 1192 Score = 74.3 bits (181), Expect = 7e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPN----- 452 G+ + VHD +WTHA VDTMN++ RE+FV L++ PIL++ LL+ + S P+ Sbjct: 1099 GLTYVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLEKYCSSLPSDTRTK 1158 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L+ VP+ GDFDL+ V +S YFF+ Sbjct: 1159 KYQEYRKLRLLLANVPQTGDFDLQRVKESTYFFS 1192 [118][TOP] >UniRef100_B4JQF3 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4JQF3_DROGR Length = 1379 Score = 73.9 bits (180), Expect = 9e-12 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHAC V +NR RE+FV L++ PILE L + +++Y Sbjct: 1284 GITFVSVHDCFWTHACRVPELNRACREQFVALHSQPILEKLSEFMRQTYSFRDNDFTNDG 1343 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL VL S YFF+ Sbjct: 1344 SVEDLSKRQLNRTLRQLPQKGDFDLNNVLSSVYFFS 1379 [119][TOP] >UniRef100_UPI0001AE6321 UPI0001AE6321 related cluster n=1 Tax=Homo sapiens RepID=UPI0001AE6321 Length = 928 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ PIL+DL + + S Sbjct: 841 GLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEAS 900 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL++V +S YFF+ Sbjct: 901 QLKETLQAVPKPGAFDLEQVKRSTYFFS 928 [120][TOP] >UniRef100_Q9PTG7 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis RepID=Q9PTG7_XENLA Length = 1235 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G+ F VHD +WTH VD MN++ RE+FV L++ PIL++L Q + Y + Sbjct: 1142 GLTFVSVHDCFWTHPDTVDVMNKVCREQFVALHSQPILQNLSQFLLQKYCHTLSSNSKAK 1201 Query: 451 ---------LVFPPVPKRGDFDLKEVLKSQYFFN 377 L F VP+ GDFDL++V+ S YFF+ Sbjct: 1202 MSPENLRMVLHFSNVPETGDFDLRQVIDSTYFFS 1235 [121][TOP] >UniRef100_B9SQY6 DNA-directed RNA polymerase 3B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SQY6_RICCO Length = 1000 Score = 73.2 bits (178), Expect = 2e-11 Identities = 32/43 (74%), Positives = 37/43 (86%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED 485 R+ + FAGVHDS+WTHACDVD MNRILREKFVELY+ ILE+ Sbjct: 890 RDADLRFAGVHDSFWTHACDVDLMNRILREKFVELYSMSILEN 932 [122][TOP] >UniRef100_B4MZP1 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MZP1_DROWI Length = 1353 Score = 73.2 bits (178), Expect = 2e-11 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHAC V +NR RE+FV L++ PILE L + ++ Y Sbjct: 1258 GITFVSVHDCFWTHACTVPELNRHCREQFVALHSQPILEQLSEYMRQLYSFKTSDFTNDG 1317 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL VL+S YFF+ Sbjct: 1318 SVEDLSKRQLNRTLKQLPQKGDFDLDNVLESVYFFS 1353 [123][TOP] >UniRef100_A5JEF2 DNA-directed RNA polymerase n=1 Tax=Paracentrotus lividus RepID=A5JEF2_PARLI Length = 1421 Score = 73.2 bits (178), Expect = 2e-11 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL-------- 449 GI FA VHD YWTHA V+ MN I R +FV+L+ PIL+ L + + Y L Sbjct: 1326 GITFASVHDCYWTHASSVNEMNEICRNQFVKLHKEPILDLLAEFMVDKYGQLDMQDASKL 1385 Query: 448 ------------VFPPVPKRGDFDLKEVLKSQYFFN 377 VP++GDFDL VLKS YFF+ Sbjct: 1386 KRGSRNMKILEDYIKNVPEKGDFDLDNVLKSTYFFS 1421 [124][TOP] >UniRef100_Q59E91 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens RepID=Q59E91_HUMAN Length = 1072 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ PIL+DL + + S Sbjct: 985 GLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEAS 1044 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL++V +S YFF+ Sbjct: 1045 QLKETLQAVPKPGAFDLEQVKRSTYFFS 1072 [125][TOP] >UniRef100_Q4G0F4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=Q4G0F4_HUMAN Length = 1230 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ PIL+DL + + S Sbjct: 1143 GLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEAS 1202 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL++V +S YFF+ Sbjct: 1203 QLKETLQAVPKPGAFDLEQVKRSTYFFS 1230 [126][TOP] >UniRef100_B4DZE5 cDNA FLJ58806, highly similar to DNA-directed RNA polymerase, mitochondrial (EC 2.7.7.6) n=1 Tax=Homo sapiens RepID=B4DZE5_HUMAN Length = 927 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ PIL+DL + + S Sbjct: 840 GLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEAS 899 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL++V +S YFF+ Sbjct: 900 QLKETLQAVPKPGAFDLEQVKRSTYFFS 927 [127][TOP] >UniRef100_O00411 DNA-directed RNA polymerase, mitochondrial n=1 Tax=Homo sapiens RepID=RPOM_HUMAN Length = 1230 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ PIL+DL + + S Sbjct: 1143 GLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEAS 1202 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL++V +S YFF+ Sbjct: 1203 QLKETLQAVPKPGAFDLEQVKRSTYFFS 1230 [128][TOP] >UniRef100_Q9D196 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mus musculus RepID=Q9D196_MOUSE Length = 462 Score = 72.8 bits (177), Expect = 2e-11 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 19/95 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL-------------LQSFQE 464 G+ F VHD +WTHA D+ TMN + RE+FV L++ PILEDL ++S + Sbjct: 368 GLIFVSVHDCFWTHAADIPTMNEVCREQFVRLHSQPILEDLAKFLKKRFCSVSSIKSLKS 427 Query: 463 SYPNLV------FPPVPKRGDFDLKEVLKSQYFFN 377 S LV +PK G FDL +V++S YFF+ Sbjct: 428 SERALVTKLQETLQSLPKTGTFDLGQVIRSTYFFS 462 [129][TOP] >UniRef100_Q8BKF1 DNA-directed RNA polymerase, mitochondrial n=3 Tax=Mus musculus RepID=RPOM_MOUSE Length = 1207 Score = 72.8 bits (177), Expect = 2e-11 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 19/95 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL-------------LQSFQE 464 G+ F VHD +WTHA D+ TMN + RE+FV L++ PILEDL ++S + Sbjct: 1113 GLIFVSVHDCFWTHAADIPTMNEVCREQFVRLHSQPILEDLAKFLKKRFCSVSSIKSLKS 1172 Query: 463 SYPNLV------FPPVPKRGDFDLKEVLKSQYFFN 377 S LV +PK G FDL +V++S YFF+ Sbjct: 1173 SERALVTKLQETLQSLPKTGTFDLGQVIRSTYFFS 1207 [130][TOP] >UniRef100_UPI00006A0E92 DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6) (MtRPOL). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0E92 Length = 1223 Score = 72.4 bits (176), Expect = 3e-11 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY----------- 458 G+ F VHD +WTH VD MN++ RE+FV L++ PIL++L Q + Y Sbjct: 1130 GLTFVSVHDCFWTHPDTVDVMNKVCREQFVALHSQPILQNLSQFLLQKYCQTLSSDKMAK 1189 Query: 457 -------PNLVFPPVPKRGDFDLKEVLKSQYFFN 377 L F VP+ G+FDLK+V+ S YFF+ Sbjct: 1190 MSPENLRMTLHFSNVPETGNFDLKQVIDSTYFFS 1223 [131][TOP] >UniRef100_Q9VPW4 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster RepID=Q9VPW4_DROME Length = 1369 Score = 72.0 bits (175), Expect = 4e-11 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 1274 GITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSEFMRHTYSFKDSDFINDG 1333 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + +P++GDFDL+ VL S YFF+ Sbjct: 1334 SVEDLSKRQLNRILKQMPQKGDFDLRNVLDSVYFFS 1369 [132][TOP] >UniRef100_Q8MRK5 GH27547p n=1 Tax=Drosophila melanogaster RepID=Q8MRK5_DROME Length = 244 Score = 72.0 bits (175), Expect = 4e-11 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 149 GITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSEFMRHTYSFKDSDFINDG 208 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N + +P++GDFDL+ VL S YFF+ Sbjct: 209 SVEDLSKRQLNRILKQMPQKGDFDLRNVLDSVYFFS 244 [133][TOP] >UniRef100_Q4QAL7 Mitochondrial DNA-directed RNA polymerase, putative n=1 Tax=Leishmania major RepID=Q4QAL7_LEIMA Length = 1509 Score = 72.0 bits (175), Expect = 4e-11 Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ ++++LRE+FV LY+ L +L + ++E+Y + Sbjct: 1427 GLSMMAVHDSYWTYACDMPKLSQVLREQFVNLYSKYDPLWELKEQWEETYFMDLRRHGVK 1486 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1487 LPDPPKRGDLDLNVVLNSPYFFS 1509 [134][TOP] >UniRef100_A4I0V3 Mitochondrial DNA-directed RNA polymerase, putative n=1 Tax=Leishmania infantum RepID=A4I0V3_LEIIN Length = 1510 Score = 72.0 bits (175), Expect = 4e-11 Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ ++++LRE+FV LY+ L +L + ++E+Y + Sbjct: 1428 GLSMMAVHDSYWTYACDMPKLSQVLREQFVNLYSKYDPLWELKEQWEETYFMDLRRHGVK 1487 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1488 LPDPPKRGDLDLNVVLNSPYFFS 1510 [135][TOP] >UniRef100_A4HDH2 Mitochondrial DNA-directed RNA polymerase,putative n=1 Tax=Leishmania braziliensis RepID=A4HDH2_LEIBR Length = 1299 Score = 72.0 bits (175), Expect = 4e-11 Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ ++++LRE+FV LY+ L +L + ++E+Y + Sbjct: 1217 GLSMMAVHDSYWTYACDMPKLSQVLREQFVNLYSKYDPLWELKEQWEETYFMDLRRHGVK 1276 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1277 LPDPPKRGDLDLNVVLNSPYFFS 1299 [136][TOP] >UniRef100_Q29LI1 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q29LI1_DROPS Length = 1363 Score = 71.6 bits (174), Expect = 5e-11 Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHAC V +NR RE+FV L++ PILE L + +Y Sbjct: 1268 GITFVSVHDCFWTHACTVPELNRSCREQFVALHSQPILEQLSDFMRNTYSFKDNDFTNDG 1327 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDF+L+ VL S YFF+ Sbjct: 1328 SVEDLSKRQLNRTLKQLPQKGDFELRNVLDSIYFFS 1363 [137][TOP] >UniRef100_Q4DZG9 Mitochondrial DNA-directed RNA polymerase, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DZG9_TRYCR Length = 1278 Score = 71.2 bits (173), Expect = 6e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ ++++LR++FV LY+ L +L + ++E+Y + Sbjct: 1196 GLSMMAVHDSYWTYACDLPVLSKVLRQQFVTLYSKYDPLWELKEQWEEAYFMDLRRHGTL 1255 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 1256 LPDPPKRGDLDLSVVLDSPYFFS 1278 [138][TOP] >UniRef100_Q4CYM3 Mitochondrial DNA-directed RNA polymerase, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CYM3_TRYCR Length = 199 Score = 71.2 bits (173), Expect = 6e-11 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 7/83 (8%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNT-PILEDLLQSFQESY------PNLV 446 G++ VHDSYWT+ACD+ ++++LR++FV LY+ L +L + ++E+Y + Sbjct: 117 GLSMMAVHDSYWTYACDLPVLSKVLRQQFVTLYSKYDPLWELKEQWEEAYFMDLRRHGTL 176 Query: 445 FPPVPKRGDFDLKEVLKSQYFFN 377 P PKRGD DL VL S YFF+ Sbjct: 177 LPDPPKRGDLDLSVVLDSPYFFS 199 [139][TOP] >UniRef100_B4Q6M5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans RepID=B4Q6M5_DROSI Length = 1369 Score = 71.2 bits (173), Expect = 6e-11 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 1274 GITFVSVHDCFWTHANSVPELNRMCREQFVALHSQPILEQLSEFMRHTYSFKDSDFINDG 1333 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL+ VL S YFF+ Sbjct: 1334 SVEDLSKRQLNRTLKQLPQKGDFDLRNVLDSVYFFS 1369 [140][TOP] >UniRef100_B4NVU9 GD13252 n=1 Tax=Drosophila simulans RepID=B4NVU9_DROSI Length = 151 Score = 71.2 bits (173), Expect = 6e-11 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 56 GITFVSVHDCFWTHANSVPELNRMCREQFVALHSQPILEQLSEFMRHTYSFKDSDFINDG 115 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL+ VL S YFF+ Sbjct: 116 SVEDLSKRQLNRTLKQLPQKGDFDLRNVLDSVYFFS 151 [141][TOP] >UniRef100_B4ID50 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia RepID=B4ID50_DROSE Length = 1364 Score = 71.2 bits (173), Expect = 6e-11 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 1269 GITFVSVHDCFWTHANSVPELNRMCREQFVALHSQPILEQLSEFMRHTYSFKDSDFINDG 1328 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL+ VL S YFF+ Sbjct: 1329 SVEDLSKRQLNRTLKQLPQKGDFDLRNVLDSVYFFS 1364 [142][TOP] >UniRef100_B3MN87 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MN87_DROAN Length = 1362 Score = 70.9 bits (172), Expect = 8e-11 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L + + +Y Sbjct: 1267 GITFVSVHDCFWTHANTVPDLNRMCREQFVALHSQPILEQLSEFMRHTYSFKENDFTNDG 1326 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL+ VL S YFF+ Sbjct: 1327 SVEDLSKRQLNRTLKQMPQKGDFDLRNVLDSVYFFS 1362 [143][TOP] >UniRef100_C5DX79 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DX79_ZYGRC Length = 1311 Score = 70.9 bits (172), Expect = 8e-11 Identities = 30/53 (56%), Positives = 37/53 (69%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHACDVD MN LRE+F+ L+ ++E L F E Y N V Sbjct: 1143 GLDFASVHDSYWTHACDVDNMNVFLREQFIRLHEVDLIERLKDEFDERYKNYV 1195 [144][TOP] >UniRef100_B4P304 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4P304_DROYA Length = 1366 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L +++Y Sbjct: 1271 GITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSAYMRQTYSFKDNDFTNDG 1330 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++GDFDL+ VL S YFF+ Sbjct: 1331 SVEDLSKRQLNRTLKQLPQKGDFDLRNVLDSVYFFS 1366 [145][TOP] >UniRef100_UPI0000DA2C50 polymerase (RNA) mitochondrial (DNA directed) n=1 Tax=Rattus norvegicus RepID=UPI0000DA2C50 Length = 1203 Score = 70.1 bits (170), Expect = 1e-10 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 17/93 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL-------- 449 G+ F VHD +WTHA D+ MN + RE+FV L++ PILEDL + ++ + ++ Sbjct: 1111 GLTFVSVHDCFWTHAADIPMMNEVCREQFVRLHSEPILEDLAKFLEKRFCSVSKSLKPSE 1170 Query: 448 ---------VFPPVPKRGDFDLKEVLKSQYFFN 377 +P+ G FDL +V++S YFF+ Sbjct: 1171 LALITKLQETLRSLPETGTFDLGQVIRSTYFFS 1203 [146][TOP] >UniRef100_Q2PZ45 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ45_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [147][TOP] >UniRef100_Q2PZ44 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ44_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [148][TOP] >UniRef100_Q2PZ43 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ43_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [149][TOP] >UniRef100_Q2PZ41 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ41_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [150][TOP] >UniRef100_Q2PZ38 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ38_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [151][TOP] >UniRef100_Q2PZ37 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ37_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [152][TOP] >UniRef100_Q2PZ34 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tigriopus californicus RepID=Q2PZ34_TIGCA Length = 1176 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [153][TOP] >UniRef100_Q6FLX9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FLX9_CANGA Length = 1326 Score = 69.7 bits (169), Expect = 2e-10 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 R+ G++FA VHDSYWTHA DVD MN ++R+KF+EL+ +++ L + F E Y N Sbjct: 1154 RDNGLDFASVHDSYWTHASDVDKMNVVIRDKFIELHEVDLIQRLKEEFDERYKN 1207 [154][TOP] >UniRef100_UPI000194DC2A PREDICTED: polymerase (RNA) mitochondrial (DNA directed) n=1 Tax=Taeniopygia guttata RepID=UPI000194DC2A Length = 1219 Score = 69.3 bits (168), Expect = 2e-10 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 17/93 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL-------- 449 G+ F VHD YWTHA VD MN++ R++FV L++ IL+DL + E Y + Sbjct: 1127 GLTFVSVHDCYWTHALTVDVMNQVCRQQFVALHSEKILQDLSEFMLEKYCSSSSSSTEPI 1186 Query: 448 ---------VFPPVPKRGDFDLKEVLKSQYFFN 377 VP+ G+F+LK+V+ S YFF+ Sbjct: 1187 AQWQKRLMEQLSSVPRTGEFNLKQVMDSTYFFS 1219 [155][TOP] >UniRef100_UPI0001791AF5 PREDICTED: similar to CG4644 CG4644-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791AF5 Length = 1249 Score = 69.3 bits (168), Expect = 2e-10 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 13/89 (14%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL----LQSFQESYPNL---- 449 GI + VHD +WTH V+ M +I RE+FV L+N PILE+L + ++ S ++ Sbjct: 1161 GITYVSVHDCFWTHPNSVEIMGKICREQFVALHNEPILENLSNFMINKYELSNYDITNDT 1220 Query: 448 -----VFPPVPKRGDFDLKEVLKSQYFFN 377 VF +PK+GDF L VL S YFF+ Sbjct: 1221 QDMLNVFQQLPKKGDFKLNNVLDSVYFFS 1249 [156][TOP] >UniRef100_UPI0000503CDC UPI0000503CDC related cluster n=1 Tax=Rattus norvegicus RepID=UPI0000503CDC Length = 1205 Score = 69.3 bits (168), Expect = 2e-10 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 19/95 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL-------- 449 G+ F VHD +WTHA D+ MN + RE+FV L++ PILEDL + ++ + ++ Sbjct: 1111 GLTFVSVHDCFWTHAADIPMMNEVCREQFVRLHSEPILEDLAKFLEKRFCSVSNTRSLKP 1170 Query: 448 -----------VFPPVPKRGDFDLKEVLKSQYFFN 377 +P+ G FDL +V++S YFF+ Sbjct: 1171 SELALITKLQETLRSLPETGTFDLGQVIRSTYFFS 1205 [157][TOP] >UniRef100_UPI0000EC9F36 DNA-directed RNA polymerase, mitochondrial precursor (EC 2.7.7.6) (MtRPOL). n=1 Tax=Gallus gallus RepID=UPI0000EC9F36 Length = 1018 Score = 69.3 bits (168), Expect = 2e-10 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 14/90 (15%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G+ F VHD YWTHA VD MN I R++FV L++ ILEDL + E+Y + Sbjct: 929 GLTFVSVHDCYWTHALTVDIMNEICRQQFVALHSQKILEDLSKFMLENYCSPDRESRALW 988 Query: 451 -----LVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G+F+L +V+ S YFF+ Sbjct: 989 QKKLMEQLSNVPKTGEFNLNKVIDSTYFFS 1018 [158][TOP] >UniRef100_Q4N745 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N745_THEPA Length = 1225 Score = 69.3 bits (168), Expect = 2e-10 Identities = 33/74 (44%), Positives = 48/74 (64%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 419 +FA VHDSYW H VD M+ +R +F ++ PIL+DL +S + F P PK+G+ Sbjct: 1153 SFASVHDSYWIHPDKVDMMHTYIRNEFFNMHTKPILDDLHKSVLNKL-QINFRPPPKKGN 1211 Query: 418 FDLKEVLKSQYFFN 377 F+L+ VL S+YFF+ Sbjct: 1212 FNLEHVLDSKYFFH 1225 [159][TOP] >UniRef100_Q2PZ35 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tigriopus californicus RepID=Q2PZ35_TIGCA Length = 1176 Score = 69.3 bits (168), Expect = 2e-10 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSKAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [160][TOP] >UniRef100_A7T5U5 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7T5U5_NEMVE Length = 417 Score = 69.3 bits (168), Expect = 2e-10 Identities = 30/52 (57%), Positives = 38/52 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL 449 GINFA VHDS+WTHA +D MNR+ RE+FV L+ PIL+DL F ++Y L Sbjct: 365 GINFASVHDSFWTHAAHIDIMNRLCREQFVSLHTQPILQDLQAHFVDNYGGL 416 [161][TOP] >UniRef100_B3N8B5 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3N8B5_DROER Length = 1365 Score = 68.6 bits (166), Expect = 4e-10 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 20/96 (20%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP---------- 455 GI F VHD +WTHA V +NR+ RE+FV L++ PILE L +++Y Sbjct: 1270 GITFVSVHDCFWTHANTVPELNRMCREQFVALHSQPILEQLSAFMRQTYSFRVNDFTNDG 1329 Query: 454 ----------NLVFPPVPKRGDFDLKEVLKSQYFFN 377 N +P++G+FDL+ VL S YFF+ Sbjct: 1330 SVEDLSKRQLNRTLKQLPQKGNFDLRNVLDSVYFFS 1365 [162][TOP] >UniRef100_A5DVV6 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5DVV6_LODEL Length = 1307 Score = 68.6 bits (166), Expect = 4e-10 Identities = 28/54 (51%), Positives = 41/54 (75%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G++FA VHDS+WTHA DVDTMN +LR++FV+L++ ++E+L F E Y N + Sbjct: 1140 GLHFASVHDSFWTHASDVDTMNTLLRQEFVKLHSRNLVEELKDEFMERYQNTYY 1193 [163][TOP] >UniRef100_UPI0000F2C9D0 PREDICTED: similar to RNA polymerase n=1 Tax=Monodelphis domestica RepID=UPI0000F2C9D0 Length = 1208 Score = 68.2 bits (165), Expect = 5e-10 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 18/94 (19%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQ----------------- 476 G+ F VHD +WTHA VD MN + RE+FV L++ PIL+DL + Sbjct: 1115 GLTFVSVHDCFWTHASTVDIMNEVCREQFVNLHSQPILQDLSKFLVTKYCPWSWSHESEE 1174 Query: 475 -SFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 S + ++ VPK G+ DL++V +S YFF+ Sbjct: 1175 MSDNQKLMLMILSDVPKLGNLDLQKVKESTYFFS 1208 [164][TOP] >UniRef100_Q4WZV7 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus RepID=Q4WZV7_ASPFU Length = 1375 Score = 68.2 bits (165), Expect = 5e-10 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 + G+ F+ VHDS+WTHACDVDTMN+ILRE FV +++ I+ L FQ Y +F Sbjct: 1135 QAGLTFSAVHDSFWTHACDVDTMNQILREAFVRMHSDDIIRRLASEFQVRYGQNLF 1190 [165][TOP] >UniRef100_B0XUL0 DNA-directed RNA polymerase n=1 Tax=Aspergillus fumigatus A1163 RepID=B0XUL0_ASPFC Length = 1376 Score = 68.2 bits (165), Expect = 5e-10 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 + G+ F+ VHDS+WTHACDVDTMN+ILRE FV +++ I+ L FQ Y +F Sbjct: 1136 QAGLTFSAVHDSFWTHACDVDTMNQILREAFVRMHSDDIIRRLASEFQVRYGQNLF 1191 [166][TOP] >UniRef100_Q4UIH0 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UIH0_THEAN Length = 1222 Score = 67.8 bits (164), Expect = 7e-10 Identities = 33/74 (44%), Positives = 48/74 (64%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 419 +FA VHDSYW H VD M+ +R +F ++ PIL+DL +S + F P PK+G+ Sbjct: 1150 SFATVHDSYWIHPDKVDMMHTHIRNEFFNMHTKPILDDLHKSVLNKL-QIDFRPPPKKGN 1208 Query: 418 FDLKEVLKSQYFFN 377 F+L+ VL S+YFF+ Sbjct: 1209 FNLEHVLDSKYFFH 1222 [167][TOP] >UniRef100_A9V1Q0 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V1Q0_MONBE Length = 1253 Score = 67.8 bits (164), Expect = 7e-10 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 15/80 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY----------- 458 G+ FA +HDSYWTHA VD MN R++F+ L+ P+L++LL+ F+ + Sbjct: 752 GLTFAAIHDSYWTHAASVDVMNLHTRQQFLLLHEAPLLDNLLRFFRAQHEGRPLREQYQK 811 Query: 457 ----PNLVFPPVPKRGDFDL 410 N+VF P P +GD DL Sbjct: 812 RYGQTNVVFEPCPSKGDLDL 831 [168][TOP] >UniRef100_A8NIS4 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NIS4_COPC7 Length = 1216 Score = 67.8 bits (164), Expect = 7e-10 Identities = 27/54 (50%), Positives = 38/54 (70%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFP 440 + FA VHDSYWTHACDVD M+ I+R+ F+EL++T +L L F++ Y + P Sbjct: 1037 LTFASVHDSYWTHACDVDAMSEIIRDTFIELHSTDVLGRLYNEFKQRYKGYLIP 1090 [169][TOP] >UniRef100_Q2PZ39 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ39_TIGCA Length = 1176 Score = 67.0 bits (162), Expect = 1e-09 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S + F+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFXFS 1176 [170][TOP] >UniRef100_Q5ABC9 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5ABC9_CANAL Length = 1300 Score = 67.0 bits (162), Expect = 1e-09 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PNLVFPPVPKR 425 +NFA VHDS+WTHA DV MNRI+RE+FV+L+ T ++E L + F E Y N P+P Sbjct: 1135 LNFASVHDSFWTHAADVPQMNRIIREQFVKLHTTNLIELLKEEFSERYKDNYQVLPIPNN 1194 Query: 424 GDFDLK 407 + K Sbjct: 1195 HELARK 1200 [171][TOP] >UniRef100_C4YFJ1 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YFJ1_CANAL Length = 1280 Score = 67.0 bits (162), Expect = 1e-09 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PNLVFPPVPKR 425 +NFA VHDS+WTHA DV MNRI+RE+FV+L+ T ++E L + F E Y N P+P Sbjct: 1115 LNFASVHDSFWTHAADVPQMNRIIREQFVKLHTTNLIELLKEEFSERYKDNYQVLPIPNN 1174 Query: 424 GDFDLK 407 + K Sbjct: 1175 HELARK 1180 [172][TOP] >UniRef100_UPI0000120E2B Hypothetical protein CBG19789 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000120E2B Length = 1030 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY--PNL--VFPP 437 GI FA VHD +WTHA VD MN+I R++FV L++ PI+E + F+ +Y P + + PP Sbjct: 939 GITFAAVHDCFWTHANSVDEMNQICRQQFVSLHSQPIVEQCSEWFKTTYLTPRIQKILPP 998 Query: 436 VP------------KRGDFDLKEVLKSQYFFN 377 K+G+ D+++V S YFF+ Sbjct: 999 SEVDRFADIFTVKVKQGELDIEKVKDSVYFFS 1030 [173][TOP] >UniRef100_A8XWB1 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8XWB1_CAEBR Length = 1160 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY--PNL--VFPP 437 GI FA VHD +WTHA VD MN+I R++FV L++ PI+E + F+ +Y P + + PP Sbjct: 1069 GITFAAVHDCFWTHANSVDEMNQICRQQFVSLHSQPIVEQCSEWFKTTYLTPRIQKILPP 1128 Query: 436 VP------------KRGDFDLKEVLKSQYFFN 377 K+G+ D+++V S YFF+ Sbjct: 1129 SEVDRFADIFTVKVKQGELDIEKVKDSVYFFS 1160 [174][TOP] >UniRef100_C0NPG4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NPG4_AJECG Length = 1397 Score = 66.6 bits (161), Expect = 2e-09 Identities = 27/56 (48%), Positives = 41/56 (73%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA DVDTMNR+LR+ FV +++ I++ L F+ Y N ++ Sbjct: 1155 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFVRMHSEDIIQRLASEFKTRYANHMY 1210 [175][TOP] >UniRef100_A6QUH4 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6QUH4_AJECN Length = 1397 Score = 66.6 bits (161), Expect = 2e-09 Identities = 27/56 (48%), Positives = 41/56 (73%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA DVDTMNR+LR+ FV +++ I++ L F+ Y N ++ Sbjct: 1155 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFVRMHSEDIIQRLASEFKTRYANHMY 1210 [176][TOP] >UniRef100_A1DIB9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DIB9_NEOFI Length = 1376 Score = 66.6 bits (161), Expect = 2e-09 Identities = 28/56 (50%), Positives = 39/56 (69%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 + G+ F+ VHDS+WTHACDVD+MN+ILRE FV +++ I+ L FQ Y +F Sbjct: 1136 QAGLTFSAVHDSFWTHACDVDSMNQILREAFVRMHSDDIIRRLASEFQVRYGQNLF 1191 [177][TOP] >UniRef100_UPI0000E2503A PREDICTED: similar to RPOM_HUMAN n=1 Tax=Pan troglodytes RepID=UPI0000E2503A Length = 311 Score = 66.2 bits (160), Expect = 2e-09 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL------------LQSFQES 461 G+ F VHD YWTHA DV MN++ RE+FV L++ IL+DL + + S Sbjct: 224 GLTFISVHDCYWTHAADVSVMNQVCREQFVCLHSESILQDLSRFLVRRFCSEPQKILEAS 283 Query: 460 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 VPK G FDL+ V +S YFF+ Sbjct: 284 QMKETLQVVPKPGAFDLELVKRSTYFFS 311 [178][TOP] >UniRef100_C8Z7P6 Rpo41p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z7P6_YEAST Length = 1351 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 1181 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 1233 [179][TOP] >UniRef100_C7GY77 Rpo41p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GY77_YEAS2 Length = 1351 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 1181 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 1233 [180][TOP] >UniRef100_C5GMV9 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis RepID=C5GMV9_AJEDR Length = 1382 Score = 66.2 bits (160), Expect = 2e-09 Identities = 33/72 (45%), Positives = 46/72 (63%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 E G++F+ VHDS+WTHA DVD MNR+LR+ FV +++ I+E L F+ Y N ++ Sbjct: 1155 ELGLSFSAVHDSFWTHAADVDIMNRVLRDAFVLMHSEDIVERLASEFKTRYANHMYLANI 1214 Query: 430 KRGDFDLKEVLK 395 K G K VLK Sbjct: 1215 KPGTPLAKAVLK 1226 [181][TOP] >UniRef100_B5VHZ3 YFL036Wp-like protein (Fragment) n=1 Tax=Saccharomyces cerevisiae AWRI1631 RepID=B5VHZ3_YEAS6 Length = 224 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 91 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 143 [182][TOP] >UniRef100_B3LUH5 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a RepID=B3LUH5_YEAS1 Length = 1351 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 1181 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 1233 [183][TOP] >UniRef100_A7A203 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae YJM789 RepID=A7A203_YEAS7 Length = 1351 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 1181 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 1233 [184][TOP] >UniRef100_P13433 DNA-directed RNA polymerase, mitochondrial n=1 Tax=Saccharomyces cerevisiae RepID=RPOM_YEAST Length = 1351 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV 446 G++FA VHDSYWTHA D+DTMN +LRE+F++L+ ++ L + F + Y N V Sbjct: 1181 GLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRYKNYV 1233 [185][TOP] >UniRef100_UPI0000EB1A70 UPI0000EB1A70 related cluster n=1 Tax=Canis lupus familiaris RepID=UPI0000EB1A70 Length = 1149 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 17/93 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILED----LLQSFQESYPNLVFP- 440 G+ F VHD +WTHA DV MN++ RE+FV L++ PIL + L++ F S +L P Sbjct: 1057 GLTFVSVHDCFWTHAADVAVMNQVCREQFVHLHSQPILHNLSRFLVERFCCSSRSLKHPK 1116 Query: 439 ------------PVPKRGDFDLKEVLKSQYFFN 377 VP+ G FDL++V S YFF+ Sbjct: 1117 DSWISKLQDTLKAVPETGAFDLEQVKHSTYFFS 1149 [186][TOP] >UniRef100_Q8WQA3 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q8WQA3_CAEEL Length = 1138 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY--PNL------ 449 GI FA VHD +WTHA VD MN I R++FV L++ PI+E + F+++Y P + Sbjct: 1047 GITFAAVHDCFWTHANSVDQMNEICRQQFVSLHSQPIVEQCSEWFKKTYLTPKMAKILPE 1106 Query: 448 --------VFPPVPKRGDFDLKEVLKSQYFFN 377 +F + GD D+++V S YFF+ Sbjct: 1107 KDFQKYSEIFTANIEHGDLDIEKVKDSVYFFS 1138 [187][TOP] >UniRef100_A5PEY3 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=A5PEY3_CAEEL Length = 1156 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY--PNL------ 449 GI FA VHD +WTHA VD MN I R++FV L++ PI+E + F+++Y P + Sbjct: 1065 GITFAAVHDCFWTHANSVDQMNEICRQQFVSLHSQPIVEQCSEWFKKTYLTPKMAKILPE 1124 Query: 448 --------VFPPVPKRGDFDLKEVLKSQYFFN 377 +F + GD D+++V S YFF+ Sbjct: 1125 KDFQKYSEIFTANIEHGDLDIEKVKDSVYFFS 1156 [188][TOP] >UniRef100_C1G892 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1G892_PARBD Length = 1408 Score = 65.9 bits (159), Expect = 3e-09 Identities = 26/56 (46%), Positives = 41/56 (73%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA DVDTMNR+LR+ F+ +++ I++ L F+ Y N ++ Sbjct: 1155 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFIRMHSEDIVQRLASEFKTRYANHMY 1210 [189][TOP] >UniRef100_C0RZR9 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0RZR9_PARBP Length = 1319 Score = 65.9 bits (159), Expect = 3e-09 Identities = 26/56 (46%), Positives = 41/56 (73%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA DVDTMNR+LR+ F+ +++ I++ L F+ Y N ++ Sbjct: 1042 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFIRMHSEDIVQRLASEFKTRYANHMY 1097 [190][TOP] >UniRef100_Q6CRZ5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CRZ5_KLULA Length = 1263 Score = 65.5 bits (158), Expect = 3e-09 Identities = 26/49 (53%), Positives = 37/49 (75%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 G++FA VHDSYWTHA +VD MNR+LR++F++L+ ++E L F E Y Sbjct: 1095 GLDFAAVHDSYWTHASEVDNMNRLLRQEFIKLHEVDLIERLKNEFDERY 1143 [191][TOP] >UniRef100_C4QX83 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4QX83_PICPG Length = 1321 Score = 65.1 bits (157), Expect = 4e-09 Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN-LVFPPVPKR 425 ++FA VHDSYWTHA DVD MN ILR+ FV+L+ T +++DL F Y LV V K+ Sbjct: 1156 LSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFDRRYHGFLVVESVSKK 1215 [192][TOP] >UniRef100_UPI0001925416 PREDICTED: similar to polymerase (RNA) mitochondrial (DNA directed) (predicted) n=1 Tax=Hydra magnipapillata RepID=UPI0001925416 Length = 570 Score = 64.7 bits (156), Expect = 6e-09 Identities = 26/51 (50%), Positives = 34/51 (66%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNL 449 + FA VHDS+WTHACD+D +N R++FV L+ PILEDL F + L Sbjct: 519 MTFASVHDSFWTHACDIDKLNEFCRQEFVHLHELPILEDLKNHFDRKFSGL 569 [193][TOP] >UniRef100_UPI0000EBCCC2 PREDICTED: similar to Polymerase (RNA) mitochondrial (DNA directed) n=1 Tax=Bos taurus RepID=UPI0000EBCCC2 Length = 1224 Score = 64.7 bits (156), Expect = 6e-09 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL--------------LQSFQ 467 G+ F VHD +WTHA DV MN++ RE+FV L++ PIL DL +S Sbjct: 1135 GLTFVSVHDCFWTHAADVGVMNQVCREQFVRLHSQPILHDLSRFLIKRFCSDSRTSKSMW 1194 Query: 466 ESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 S VP G FDL +V +S +FF+ Sbjct: 1195 VSRLKDTLLSVPPTGTFDLDQVKRSTFFFS 1224 [194][TOP] >UniRef100_UPI00006181DB UPI00006181DB related cluster n=1 Tax=Bos taurus RepID=UPI00006181DB Length = 1221 Score = 64.7 bits (156), Expect = 6e-09 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL--------------LQSFQ 467 G+ F VHD +WTHA DV MN++ RE+FV L++ PIL DL +S Sbjct: 1132 GLTFVSVHDCFWTHAADVGVMNQVCREQFVRLHSQPILHDLSRFLIKRFCSDSRTSKSMW 1191 Query: 466 ESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 377 S VP G FDL +V +S +FF+ Sbjct: 1192 VSRLKDTLLSVPPTGTFDLDQVKRSTFFFS 1221 [195][TOP] >UniRef100_C1GZG1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GZG1_PARBA Length = 1405 Score = 64.7 bits (156), Expect = 6e-09 Identities = 26/56 (46%), Positives = 41/56 (73%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA DVDTMNR+LR+ F+ +++ I++ L F+ Y N ++ Sbjct: 1155 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFILMHSEDIVQRLASEFKTRYANHMY 1210 [196][TOP] >UniRef100_A1C7P8 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1C7P8_ASPCL Length = 1375 Score = 64.7 bits (156), Expect = 6e-09 Identities = 28/54 (51%), Positives = 37/54 (68%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ F+ VHDS+WTHACDVD MN ILRE FV +++ I++ L FQ Y +F Sbjct: 1137 GLTFSAVHDSFWTHACDVDLMNDILREAFVRMHSDDIIKRLASEFQVRYGQNLF 1190 [197][TOP] >UniRef100_Q2PZ42 DNA-directed RNA polymerase n=1 Tax=Tigriopus californicus RepID=Q2PZ42_TIGCA Length = 1176 Score = 64.3 bits (155), Expect = 8e-09 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 16/92 (17%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD + TH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFRTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKSQYFFN 377 F VPK+GD DL V S +FF+ Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS 1176 [198][TOP] >UniRef100_B8N6M7 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8N6M7_ASPFN Length = 1375 Score = 64.3 bits (155), Expect = 8e-09 Identities = 26/54 (48%), Positives = 39/54 (72%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G++F+ VHDS+WTHACDVD+MN ILRE FV +++ +++ L F+ Y +F Sbjct: 1141 GLSFSAVHDSFWTHACDVDSMNNILREAFVRMHSDDVVKRLAAEFEVRYGKNLF 1194 [199][TOP] >UniRef100_Q2PZ40 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tigriopus californicus RepID=Q2PZ40_TIGCA Length = 1171 Score = 63.9 bits (154), Expect = 1e-08 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 16/87 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKS 392 F VPK+GD DL V S Sbjct: 1145 VQLAKAEQTFRAVPKKGDLDLAVVKHS 1171 [200][TOP] >UniRef100_B5RTF6 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RTF6_DEBHA Length = 1312 Score = 63.9 bits (154), Expect = 1e-08 Identities = 26/51 (50%), Positives = 37/51 (72%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E G++FA VHDSYWTHACDV+TMN +RE+FV+L+ ++ + F+ Y Sbjct: 1143 ESGLSFASVHDSYWTHACDVNTMNSHIREQFVKLHGENLIVKIRDEFERRY 1193 [201][TOP] >UniRef100_A5DN82 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DN82_PICGU Length = 1303 Score = 63.9 bits (154), Expect = 1e-08 Identities = 27/51 (52%), Positives = 36/51 (70%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 + G+ FA VHDSYWTHACDVDTMN +RE+FV L+ ++ L F++ Y Sbjct: 1134 QSGLAFAAVHDSYWTHACDVDTMNTHIREQFVALHGENLIVKLRDEFEKRY 1184 [202][TOP] >UniRef100_UPI000151B179 hypothetical protein PGUG_04733 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B179 Length = 1303 Score = 63.5 bits (153), Expect = 1e-08 Identities = 27/49 (55%), Positives = 35/49 (71%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 G+ FA VHDSYWTHACDVDTMN +RE+FV L+ ++ L F++ Y Sbjct: 1136 GLAFAAVHDSYWTHACDVDTMNTHIREQFVALHGENLIVKLRDEFEKRY 1184 [203][TOP] >UniRef100_A2R5W5 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2R5W5_ASPNC Length = 1367 Score = 63.5 bits (153), Expect = 1e-08 Identities = 24/54 (44%), Positives = 39/54 (72%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ F+ VHDS+WTHACD+D+MN++LRE FV +++ +++ L F+ Y +F Sbjct: 1135 GLQFSAVHDSFWTHACDIDSMNQLLREAFVRMHSDDVVKRLAAEFEVRYSKNLF 1188 [204][TOP] >UniRef100_UPI00003BD9F7 hypothetical protein DEHA0D09790g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD9F7 Length = 1312 Score = 63.2 bits (152), Expect = 2e-08 Identities = 26/51 (50%), Positives = 37/51 (72%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E G++FA VHDSYWTHACDV+TMN +RE+FV+L+ ++ + F+ Y Sbjct: 1143 ELGLSFASVHDSYWTHACDVNTMNSHIREQFVKLHGENLIVKIRDEFERRY 1193 [205][TOP] >UniRef100_Q5AVS1 DNA-directed RNA polymerase n=2 Tax=Emericella nidulans RepID=Q5AVS1_EMENI Length = 1391 Score = 63.2 bits (152), Expect = 2e-08 Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PNLVFPPV 434 + G+ F+ VHDS+WTH DVD+MNRILRE FV++++ +++ L F+ Y NL + V Sbjct: 1152 QAGLTFSAVHDSFWTHPSDVDSMNRILREAFVQMHSDDVIKRLAAEFEVRYGRNLHYARV 1211 Query: 433 PK 428 P+ Sbjct: 1212 PR 1213 [206][TOP] >UniRef100_A8QAZ2 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QAZ2_MALGO Length = 1358 Score = 63.2 bits (152), Expect = 2e-08 Identities = 28/55 (50%), Positives = 36/55 (65%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFP 440 G+ FA VHDSYWTHACD+DTM+ I+R+ FV L++ IL L F + Y P Sbjct: 1196 GLVFASVHDSYWTHACDIDTMSDIIRDTFVRLHSQDILVRLRDEFLQRYKGYKVP 1250 [207][TOP] >UniRef100_UPI00016ADAC3 DNA-directed RNA polymerase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ADAC3 Length = 818 Score = 62.8 bits (151), Expect = 2e-08 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 419 + A +HD Y THA D + + R +R+ FVE+Y T D L F++ + +L P +P RGD Sbjct: 750 SLAMIHDDYGTHAADTEKLYRAIRKTFVEMYET---NDPLAHFRDQFEDL--PALPSRGD 804 Query: 418 FDLKEVLKSQYFF 380 DL +V +SQ+FF Sbjct: 805 LDLSQVEQSQFFF 817 [208][TOP] >UniRef100_A5E7B8 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E7B8_LODEL Length = 1259 Score = 62.8 bits (151), Expect = 2e-08 Identities = 26/52 (50%), Positives = 37/52 (71%) Frame = -3 Query: 607 PGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 P + FA +HDSYWTHACDVD ++ ILRE+FVE+Y+ +E + + F+ N Sbjct: 1088 PSLVFASIHDSYWTHACDVDRLSVILREQFVEMYSFDYMEVVKRDFERQVRN 1139 [209][TOP] >UniRef100_Q4PBM0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4PBM0_USTMA Length = 1566 Score = 62.4 bits (150), Expect = 3e-08 Identities = 28/57 (49%), Positives = 37/57 (64%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 G+ FA VHDSYWTHA D+DTM+ ++RE FV L++ IL L + F + Y P V Sbjct: 1355 GLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILYRLREEFLQRYAGYKVPVV 1411 [210][TOP] >UniRef100_C9S6U0 DNA-directed RNA polymerase n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9S6U0_9PEZI Length = 1299 Score = 62.4 bits (150), Expect = 3e-08 Identities = 23/56 (41%), Positives = 38/56 (67%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++FA VHDS+WTHA D+D+MNR+LR+ F+ ++ ++ L F+ Y ++ Sbjct: 1050 ELGLSFAAVHDSFWTHAADIDSMNRVLRDSFIRIHEEDVIGRLAAEFEARYKGSIY 1105 [211][TOP] >UniRef100_A3LX46 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3LX46_PICST Length = 1251 Score = 62.4 bits (150), Expect = 3e-08 Identities = 24/50 (48%), Positives = 40/50 (80%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 ++FA VHDSYWTHA DVD MN+ +R +FV+L+++ ++++L + F++ Y N Sbjct: 1088 LSFASVHDSYWTHAADVDHMNKEIRNQFVKLHSSNLVQELKEEFEKRYKN 1137 [212][TOP] >UniRef100_UPI00015C3BFE hypothetical protein NCU06308 n=1 Tax=Neurospora crassa OR74A RepID=UPI00015C3BFE Length = 1443 Score = 62.0 bits (149), Expect = 4e-08 Identities = 24/56 (42%), Positives = 38/56 (67%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G+ FA VHDS+WTHA D+D+MN +LR+ F+ +++ ++ L FQ Y N ++ Sbjct: 1170 ELGLTFAAVHDSFWTHASDIDSMNAVLRDAFIRIHSEDVIGRLAAEFQARYKNSLY 1225 [213][TOP] >UniRef100_B9QZJ6 DNA-dependent RNA polymerase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QZJ6_9RHOB Length = 573 Score = 62.0 bits (149), Expect = 4e-08 Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV-FPPVPKRG 422 +F +HDS+ HACD D + LR++FV++Y+T L+ L +++ E+ P++ + +G Sbjct: 499 DFLMIHDSFGVHACDTDQLALTLRKEFVDIYSTNWLDTLHETWAEACPSIPHWKEFLGQG 558 Query: 421 DFDLKEVLKSQYFFN 377 DFD+ EVL+S +FF+ Sbjct: 559 DFDVAEVLRSDFFFS 573 [214][TOP] >UniRef100_Q1EAZ2 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis RepID=Q1EAZ2_COCIM Length = 1363 Score = 62.0 bits (149), Expect = 4e-08 Identities = 26/56 (46%), Positives = 39/56 (69%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA D+DTMNR+LR+ FV +++ I+ L F+ Y V+ Sbjct: 1134 ELGLSFSAVHDSFWTHAGDIDTMNRVLRDAFVRMHSEDIVGRLASEFKARYSKHVY 1189 [215][TOP] >UniRef100_C5PEM0 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PEM0_COCP7 Length = 1385 Score = 62.0 bits (149), Expect = 4e-08 Identities = 26/56 (46%), Positives = 39/56 (69%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA D+DTMNR+LR+ FV +++ I+ L F+ Y V+ Sbjct: 1156 ELGLSFSAVHDSFWTHAGDIDTMNRVLRDAFVRMHSEDIVGRLASEFKARYSKHVY 1211 [216][TOP] >UniRef100_B9W6L5 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9W6L5_CANDC Length = 1300 Score = 62.0 bits (149), Expect = 4e-08 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY-PNLVFPPV 434 E + FA VHDS+WTHA DV MN+I+R++FV+L+ T ++E L + F E Y N P+ Sbjct: 1132 ENDLQFASVHDSFWTHAADVPQMNKIIRDQFVKLHTTNLIELLKEEFTERYKDNYQVLPL 1191 Query: 433 PKRGDFDLK 407 P + K Sbjct: 1192 PNTHELTRK 1200 [217][TOP] >UniRef100_P38671 DNA-directed RNA polymerase, mitochondrial n=1 Tax=Neurospora crassa RepID=RPOM_NEUCR Length = 1423 Score = 62.0 bits (149), Expect = 4e-08 Identities = 24/56 (42%), Positives = 38/56 (67%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G+ FA VHDS+WTHA D+D+MN +LR+ F+ +++ ++ L FQ Y N ++ Sbjct: 1170 ELGLTFAAVHDSFWTHASDIDSMNAVLRDAFIRIHSEDVIGRLAAEFQARYKNSLY 1225 [218][TOP] >UniRef100_UPI000187E05C hypothetical protein MPER_12082 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E05C Length = 317 Score = 61.6 bits (148), Expect = 5e-08 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 425 G+ FA VHDSYWTHA +D M+ I+R+ F+ L+++ +L L F+E Y N P V R Sbjct: 155 GMTFAAVHDSYWTHASCIDEMSGIIRDTFIALHSSDVLSKLNDEFRERYKNYKIPLVQLR 214 Query: 424 GDFDLK 407 +K Sbjct: 215 SPMLIK 220 [219][TOP] >UniRef100_Q2PZ36 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tigriopus californicus RepID=Q2PZ36_TIGCA Length = 1172 Score = 61.2 bits (147), Expect = 6e-08 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 16/87 (18%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN--------- 452 G +A VHD +WTH V+ MN + R++F+ L++ PILE+L ++F ++Y N Sbjct: 1085 GCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYINEDTKQKLDP 1144 Query: 451 -------LVFPPVPKRGDFDLKEVLKS 392 F VPK+GD L V S Sbjct: 1145 VQLAKAEQTFRAVPKKGDLXLAVVKHS 1171 [220][TOP] >UniRef100_C5MG54 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MG54_CANTT Length = 1205 Score = 61.2 bits (147), Expect = 6e-08 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 4/60 (6%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSF----QESYPNLVFPP 437 GI F+ +HDSYWTH VD ++RILREKFVELY+ LE + Q F + SY + F P Sbjct: 1036 GITFSAIHDSYWTHPVHVDQLSRILREKFVELYSFDYLEYVKQEFIAQVKGSYQLVEFDP 1095 [221][TOP] >UniRef100_Q0CV53 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CV53_ASPTN Length = 1382 Score = 60.8 bits (146), Expect = 8e-08 Identities = 25/54 (46%), Positives = 37/54 (68%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G++F+ VHDS+WTHACDVD M+ ILRE FV +++ +++ L F Y +F Sbjct: 1139 GLSFSAVHDSFWTHACDVDKMSHILREAFVRMHSDDVVKRLAAEFDVRYGQNLF 1192 [222][TOP] >UniRef100_C7YY77 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YY77_NECH7 Length = 1342 Score = 60.8 bits (146), Expect = 8e-08 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 7/80 (8%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF---- 443 E G+NFA VHDS+WTHA DVD MN +LR+ F+ ++ ++ L F+ Y ++ Sbjct: 1116 ELGLNFAAVHDSFWTHAADVDVMNTVLRDAFIRIHEEDVVGRLATEFKARYRGALYLANI 1175 Query: 442 ---PPVPKRGDFDLKEVLKS 392 PV K+ +KE+ K+ Sbjct: 1176 DADSPVAKK----IKEIRKN 1191 [223][TOP] >UniRef100_C5ME71 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5ME71_CANTT Length = 1293 Score = 60.1 bits (144), Expect = 1e-07 Identities = 24/49 (48%), Positives = 37/49 (75%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 G+NFA VHDS+WTHA +V MN+++R++FV+L+ T ++ L + F E Y Sbjct: 1127 GLNFASVHDSFWTHAANVPIMNKLIRQEFVKLHTTDLVSLLKEEFLERY 1175 [224][TOP] >UniRef100_UPI000023F536 hypothetical protein FG05016.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F536 Length = 1357 Score = 59.3 bits (142), Expect = 2e-07 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+NFA VHDS+WTHA DVD +N +LRE F+ ++ ++ L F+ Y ++ Sbjct: 1127 GLNFAAVHDSFWTHAADVDILNGVLREAFIRIHEEDVVGRLAVEFEARYKGSIY 1180 [225][TOP] >UniRef100_Q6CH64 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CH64_YARLI Length = 1345 Score = 58.9 bits (141), Expect = 3e-07 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 ++FA VHDSYWTHA DV MN++LRE+FV+L++ I+ +L + Q Y Sbjct: 1167 VSFASVHDSYWTHAADVPHMNKVLREQFVKLHSMDIVGNLQKELQMRY 1214 [226][TOP] >UniRef100_Q75BP7 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q75BP7_ASHGO Length = 1295 Score = 58.5 bits (140), Expect = 4e-07 Identities = 24/51 (47%), Positives = 33/51 (64%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 G+ FA VHDSYWTHA DV MN+ LR +FV+++ +++ L F Y N Sbjct: 1130 GLQFAAVHDSYWTHASDVPKMNKALRNEFVKMHQVDLIQRLKNEFDARYKN 1180 [227][TOP] >UniRef100_C4Y8E3 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8E3_CLAL4 Length = 1311 Score = 58.5 bits (140), Expect = 4e-07 Identities = 24/51 (47%), Positives = 34/51 (66%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E ++FA VHDSYWTHACDVD M+ +R +FV+L+ ++ L F+ Y Sbjct: 1142 EDNLHFASVHDSYWTHACDVDKMSEHIRNQFVKLHEENLIVKLRDEFERRY 1192 [228][TOP] >UniRef100_B6Q8C3 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6Q8C3_PENMQ Length = 1378 Score = 58.5 bits (140), Expect = 4e-07 Identities = 24/54 (44%), Positives = 36/54 (66%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ F+ VHDS+WTHACDVD MN LR+ F+ +++ I++ L F+ Y +F Sbjct: 1126 GLVFSAVHDSFWTHACDVDKMNIALRDCFIRMHSDDIIKRLAAEFRARYQGHIF 1179 [229][TOP] >UniRef100_C5FXP3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FXP3_NANOT Length = 1375 Score = 58.2 bits (139), Expect = 5e-07 Identities = 24/56 (42%), Positives = 38/56 (67%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++F+ VHDS+WTHA D+D MNR+LR+ FV +++ I+ L + Y N ++ Sbjct: 1144 ELGLSFSAVHDSFWTHAGDIDKMNRVLRDAFVRMHSDDIVGRLAAELKARYSNNLY 1199 [230][TOP] >UniRef100_B8MRF0 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MRF0_TALSN Length = 1377 Score = 58.2 bits (139), Expect = 5e-07 Identities = 24/54 (44%), Positives = 36/54 (66%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ F+ VHDS+WTHACDVD MN LR+ F+ +++ I++ L F+ Y +F Sbjct: 1129 GLVFSAVHDSFWTHACDVDKMNIALRDCFIRMHSDDIVKRLAAEFRARYEGHIF 1182 [231][TOP] >UniRef100_UPI000151A9C4 hypothetical protein PGUG_00259 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151A9C4 Length = 1144 Score = 57.8 bits (138), Expect = 7e-07 Identities = 23/50 (46%), Positives = 35/50 (70%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 I F VHDS+WTH+ D++ ++ I+RE+F LY+ PI+E LL+ Q + N Sbjct: 978 IAFVAVHDSFWTHSRDIERLSTIIREEFARLYSAPIVESLLEDMQNTVRN 1027 [232][TOP] >UniRef100_B6HKC8 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HKC8_PENCW Length = 1353 Score = 57.8 bits (138), Expect = 7e-07 Identities = 25/57 (43%), Positives = 37/57 (64%) Frame = -3 Query: 613 REPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 +E G+ F+ VHDS+WTHA D+D MN ILRE FV +++ ++ L F+ Y +F Sbjct: 1122 QEAGLTFSAVHDSFWTHAADIDQMNLILREAFVRMHSDDVVGRLGAEFKVRYGKNMF 1178 [233][TOP] >UniRef100_A7ETG7 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7ETG7_SCLS1 Length = 1392 Score = 57.8 bits (138), Expect = 7e-07 Identities = 25/51 (49%), Positives = 34/51 (66%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E ++FA VHDS+WTHA DVDTMN ILR+ FVE+++ ++ L Y Sbjct: 1159 EAKLSFAAVHDSFWTHAADVDTMNTILRDAFVEIHSDDVIGRLAAEMATRY 1209 [234][TOP] >UniRef100_A5DAF4 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DAF4_PICGU Length = 1144 Score = 57.8 bits (138), Expect = 7e-07 Identities = 23/50 (46%), Positives = 35/50 (70%) Frame = -3 Query: 601 INFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 I F VHDS+WTH+ D++ ++ I+RE+F LY+ PI+E LL+ Q + N Sbjct: 978 IAFVAVHDSFWTHSRDIERLSTIIREEFARLYSAPIVESLLEDMQNTVRN 1027 [235][TOP] >UniRef100_A4QQ95 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4QQ95_MAGGR Length = 1380 Score = 57.8 bits (138), Expect = 7e-07 Identities = 22/54 (40%), Positives = 35/54 (64%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ FA VHDS+WTHACDV M+ ILR+ F+ ++ ++ L F+ Y + ++ Sbjct: 1120 GLTFAAVHDSFWTHACDVQKMSNILRDAFIRIHEEDVIGRLADEFKARYKDSLY 1173 [236][TOP] >UniRef100_B2WGL2 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WGL2_PYRTR Length = 1430 Score = 57.0 bits (136), Expect = 1e-06 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G++FA VHDS+WTHA D+ +N ILR+ FV +++ ++E L F Y ++ Sbjct: 1179 EMGLDFAAVHDSFWTHASDIPNLNVILRDAFVRMHSEDVVERLAAEFSARYKGALY 1234 [237][TOP] >UniRef100_Q2H1K6 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2H1K6_CHAGB Length = 1414 Score = 56.6 bits (135), Expect = 2e-06 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 G+ FA VHDS+WTHA DVD MN ++R+ F+ ++ ++ L F+ Y ++ Sbjct: 1186 GLTFAAVHDSFWTHAADVDDMNAVIRDSFIRIHQEDVIGRLKAEFEARYRGALY 1239 [238][TOP] >UniRef100_B0D7Q9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q9_LACBS Length = 960 Score = 56.6 bits (135), Expect = 2e-06 Identities = 22/55 (40%), Positives = 36/55 (65%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFP 440 G+ FA VHDSYWTHA +D+M ++R+ F+ L+++ +L L + F+E + P Sbjct: 785 GLTFASVHDSYWTHASTIDSMAEVIRDTFILLHSSDVLGKLHEEFKERFKGFKLP 839 [239][TOP] >UniRef100_B9WK99 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WK99_CANDC Length = 1211 Score = 56.2 bits (134), Expect = 2e-06 Identities = 23/45 (51%), Positives = 34/45 (75%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSF 470 G+ F+ +HDSYWTH +V+ ++RILRE+FVELY+ L+ + Q F Sbjct: 1042 GLTFSAIHDSYWTHPNNVENLSRILREQFVELYSMDYLQYVRQDF 1086 [240][TOP] >UniRef100_UPI00005A3E89 PREDICTED: similar to DNA-directed RNA polymerase, mitochondrial precursor (MtRPOL) n=1 Tax=Canis lupus familiaris RepID=UPI00005A3E89 Length = 1024 Score = 55.8 bits (133), Expect = 3e-06 Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 G+ F VHD +WTHA DV MN++ RE+FV L++ PIL +L + E + Sbjct: 905 GLTFVSVHDCFWTHAADVAVMNQVCREQFVHLHSQPILHNLSRFLVERF 953 [241][TOP] >UniRef100_C4JDA6 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JDA6_UNCRE Length = 1231 Score = 55.8 bits (133), Expect = 3e-06 Identities = 24/51 (47%), Positives = 35/51 (68%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E G++F+ VHDS+WTHA DVDTMN +LR+ FV +++ I+ L + Y Sbjct: 1001 ELGLSFSAVHDSFWTHAGDVDTMNLVLRDAFVRMHSEDIVGRLAAELKARY 1051 [242][TOP] >UniRef100_B2ANR4 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2ANR4_PODAN Length = 1346 Score = 55.8 bits (133), Expect = 3e-06 Identities = 22/56 (39%), Positives = 37/56 (66%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVF 443 E G+ FA VHDS+WTHA DVD M+ I+R+ F+ ++ ++ L + F+ + + V+ Sbjct: 1113 ERGLTFAAVHDSFWTHASDVDIMSDIIRDSFIRIHEEDVIGRLKREFEARFGDSVY 1168 [243][TOP] >UniRef100_A9CJE6 DNA-directed RNA polymerase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CJE6_AGRT5 Length = 863 Score = 55.5 bits (132), Expect = 3e-06 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLV-----FPPV 434 +F+ +HDSY THA + M + LRE+FV++Y D+L F ++ PP+ Sbjct: 788 SFSLIHDSYGTHAGNAWAMAQFLREEFVKMYGD---HDVLAEFGREITAMLPEGTQLPPL 844 Query: 433 PKRGDFDLKEVLKSQYFF 380 P++G DL +VL+S +FF Sbjct: 845 PEKGSLDLSQVLESAFFF 862 [244][TOP] >UniRef100_Q7Y5I5 32L n=1 Tax=Xanthomonas phage Xp10 RepID=Q7Y5I5_9CAUD Length = 746 Score = 55.1 bits (131), Expect = 5e-06 Identities = 29/74 (39%), Positives = 45/74 (60%) Frame = -3 Query: 598 NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGD 419 +FA +HDSY H C T+ R+LRE+FV++Y D+L F S V P P+ G Sbjct: 678 DFAMIHDSYAVHCCHATTLARVLREEFVKMYTG---HDVLAEFAAS--TGVDLPRPEPGS 732 Query: 418 FDLKEVLKSQYFFN 377 DL +V+++++FF+ Sbjct: 733 LDLGQVMEAEFFFS 746 [245][TOP] >UniRef100_Q0U2N8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0U2N8_PHANO Length = 1542 Score = 55.1 bits (131), Expect = 5e-06 Identities = 23/51 (45%), Positives = 35/51 (68%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESY 458 E G++FA VHDS+WTHA D+ +N ILR+ FV +++ I+ L + F+ Y Sbjct: 1186 ELGLDFAAVHDSFWTHASDIPNLNVILRDAFVRMHSDDIVGRLAEEFKARY 1236 [246][TOP] >UniRef100_A5H1K3 p32 n=1 Tax=Xanthomonas phage Xop411 RepID=A5H1K3_9CAUD Length = 746 Score = 54.7 bits (130), Expect = 6e-06 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = -3 Query: 610 EPGI-NFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPV 434 E GI +FA +HDSY H C T+ R+LR++FV++Y D+L F S V P Sbjct: 673 EAGIKDFAMIHDSYAVHCCHAATLARVLRDEFVKMYTG---HDVLAEFAAS--TGVDLPR 727 Query: 433 PKRGDFDLKEVLKSQYFFN 377 P+ G DL +VL++ +FF+ Sbjct: 728 PEPGSLDLDQVLEADFFFS 746 [247][TOP] >UniRef100_Q5AH39 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5AH39_CANAL Length = 1218 Score = 54.7 bits (130), Expect = 6e-06 Identities = 23/51 (45%), Positives = 35/51 (68%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 G+ F+ +HDSYWTH +V+ +++ILRE+FVELY+ L+ + Q F N Sbjct: 1049 GLTFSAIHDSYWTHPNNVEKLSKILREQFVELYSMDYLKYVRQDFINQVKN 1099 [248][TOP] >UniRef100_C6HMP3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HMP3_AJECH Length = 1265 Score = 54.7 bits (130), Expect = 6e-06 Identities = 21/32 (65%), Positives = 28/32 (87%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFV 515 E G++F+ VHDS+WTHA DVDTMNR+LR+ F+ Sbjct: 1042 ELGLSFSAVHDSFWTHAADVDTMNRVLRDAFI 1073 [249][TOP] >UniRef100_C4YTS1 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YTS1_CANAL Length = 1218 Score = 54.7 bits (130), Expect = 6e-06 Identities = 23/51 (45%), Positives = 35/51 (68%) Frame = -3 Query: 604 GINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPN 452 G+ F+ +HDSYWTH +V+ +++ILRE+FVELY+ L+ + Q F N Sbjct: 1049 GLTFSAIHDSYWTHPNNVEKLSKILREQFVELYSMDYLKYVRQDFINQVKN 1099 [250][TOP] >UniRef100_A6SS16 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SS16_BOTFB Length = 1234 Score = 54.7 bits (130), Expect = 6e-06 Identities = 27/75 (36%), Positives = 41/75 (54%) Frame = -3 Query: 610 EPGINFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVP 431 E + FA VHDS+WTHA D+DTMN LR+ F+E+++ ++ L Y + + Sbjct: 992 EAKLAFAAVHDSFWTHAADIDTMNTFLRDAFIEIHSDDVIGRLAAEMTTRYKDYMQLVKV 1051 Query: 430 KRGDFDLKEVLKSQY 386 K G ++ SQY Sbjct: 1052 KSGTLAFTKI--SQY 1064