Gene/Protein Characteristic Table for FLJ00021

Description

Product ID:	ORK07132
Accession No.:	AK074029
Alias Name:
Clone Name:	as00021 [Vector Info]
Source:	Human spleen

Features of the cloned DNA sequence	Description

Length: 4676
Physical map
Restiction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the predicted protein sequence	Description

Length: 508

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAB84855	0	100.0	FLJ00021 protei...	Homo sapiens
Q8NE00	0	100.0	Transmembrane p...	Homo sapiens
AAH37278	0	99.8	Transmembrane p...	Homo sapiens
BAF83848	0	99.6	unnamed protein...	Homo sapiens
Q5RCV1	4.1e-216	98.8	Transmembrane p...	Pongo abelii

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR002422 22 502 PF01490 Amino acid/polyamine transporter II

ProfileScan IPR002422 25 457 PS50286 Amino acid/polyamine transporter II

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR002422	22	502	PF01490	Amino acid/polyamine transporter II
ProfileScan	IPR002422	25	457	PS50286	Amino acid/polyamine transporter II

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 23 45 LYSSYVGLVYMFNLIVGTGALTM

57 79 SLVLLVFLGFMSFVTTTFVIEAM

162 184 FCIIVYLYGDLAIYAAAVPFSLM

219 241 AYRIYLAIFTLLLGPFTFFDVQK

247 269 ILTSLMRWIAFAVMIVLALIRIG

321 343 LDYVLILAFYGLLSFTAIFCFRG

361 383 GLAAVRFFLGLFPVFTISTNFPI

405 427 WVVDRVVFPTITLVPPVLVAFCT

434 456 VGITGAYAGTGIQYVIPAFLVYH

482 504 WVGFVLLWAFSCFIFVTANIILS

Method	From	To	amino acid sequence
SOSUI	23	45	LYSSYVGLVYMFNLIVGTGALTM
57	79	SLVLLVFLGFMSFVTTTFVIEAM
162	184	FCIIVYLYGDLAIYAAAVPFSLM
219	241	AYRIYLAIFTLLLGPFTFFDVQK
247	269	ILTSLMRWIAFAVMIVLALIRIG
321	343	LDYVLILAFYGLLSFTAIFCFRG
361	383	GLAAVRFFLGLFPVFTISTNFPI
405	427	WVVDRVVFPTITLVPPVLVAFCT
434	456	VGITGAYAGTGIQYVIPAFLVYH
482	504	WVGFVLLWAFSCFIFVTANIILS

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	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO