hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mie/mie24089/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4200  ( 414 res)   mie24089

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DEP      Domain found in Dishevelled, Egl-10, and Ple   129.6    5.8e-35   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DEP        1/2      49   122 ..     1    80 []    62.3    1e-14
DEP        2/2     151   222 ..     1    80 []    68.0    2e-16

Alignments of top-scoring domains:
DEP: domain 1 of 2, from 49 to 122: score 62.3, E = 1e-14
                   *->pesgvklkdrkwlkkvipncFtGselVdWLmdnlsgiidrkeAlhla
                        + + +kdr+ ++k++pncF+ +el+dWL+++ + + dr+ A++l+
   mKIAA4200    49    LHEEKVIKDRRHHLKTYPNCFVAKELIDWLIEHKE-ASDRETAIKLM 94   

                   qlLlkeGyirhvgdhltgkndhtFldkqtyYrf<-*
                   q+L++ G i+hv      +    F d + +Yrf   
   mKIAA4200    95 QKLADRGIIHHV-----CDEHKEFKDVKLFYRF    122  

DEP: domain 2 of 2, from 151 to 222: score 68.0, E = 2e-16
                   *->pesgvklkdrkwlkkvipncFtGselVdWLmdnlsgiidrkeAlhla
                      pe+ +  + r + + +++ +F+ se+ dWL++ ++ +++rkeA+ l+
   mKIAA4200   151    PETTLLQP-REEEGVKYERTFMASEFLDWLVQEGE-ATTRKEAEQLC 195  

                   qlLlkeGyirhvgdhltgkndhtFldkqtyYrf<-*
                   ++L+++G i+hv      +n+h+F d++ +Y+f   
   mKIAA4200   196 HRLMDHGIIQHV------SNKHPFVDSNLLYQF    222  

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