hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mng/mng09179/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1501  ( 606 res)   mng09179

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
RhoGAP   RhoGAP domain                                  244.6    1.4e-69   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
RhoGAP     1/1      39   192 ..     1   155 []   244.6  1.4e-69

Alignments of top-scoring domains:
RhoGAP: domain 1 of 1, from 39 to 192: score 244.6, E = 1.4e-69
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdl.
                      Pliv  C++ +e+rGL++ GIyRv+G+ +++  L+e+++rg+ +   
   mKIAA1501    39    PLIVAACCRIVEARGLESTGIYRVPGNNAVVSSLQEQLNRGPSDINl 85   

                   ndleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerle
                   +d++++d +v++slLK F+R+LPePL+t++ y++fie a ++ed +er++
   mKIAA1501    86 QDERWQDLNVISSLLKAFFRKLPEPLFTDDKYNDFIE-ANRIEDSRERMK 134  

                   alrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLl
                    lr+l+r LP + ++tL++L++hL+ +a++se+NkM ++NLA+vFgPtL+
   mKIAA1501   135 TLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLV 184  

                   rppdgdsad<-*
                   r++++ +++   
   mKIAA1501   185 RTSED-NMT    192  

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