hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh00387/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1322  ( 645 res)   mbh00387

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TBC      TBC domain                                      82.3      1e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TBC        1/1     352   584 ..     1   219 []    82.3    1e-20

Alignments of top-scoring domains:
TBC: domain 1 of 1, from 352 to 584: score 82.3, E = 1e-20
                   *->vkeGvpsstrakVWavcsgA........yqlrYAsageYerll....
                         G p s r+kVW +  g + + +++      A a e  r l++++
   mKIAA1322   352    --QGIPPSVRGKVWSLAIGNelnithelFDICLARAKERWRSLstgg 396  

                   ....rrgdekesq....avdkIekDvkRtLvkesaFqsrGKGegiskLrr
                   ++ +++ ++  +++++ + + I  D++Rt +    Fq    G+    L  
   mKIAA1322   397 seveNEDAGFSAAdreaSLELIKLDISRTFPNLCIFQ--QGGPYHDMLHS 444  

                   vLvAYswknPdvgYcQGMNVvaApfLllykSEeqAFyfLdrLlenvvPlK
                   +L AY   +PdvgY+QGM  +aA + l      +AF  + +Ll   +   
   mKIAA1322   445 ILGAYTCYRPDVGYVQGMSFIAAVLILNL-DTADAFIAFSNLLNKPCQMA 493  

                   YylpdldGvrlDqkvLdsfveellprLYeYLlskgvdlkvvsLpwfLsLy
                   ++  d    +     ++ f ee lp+L+ +     ++++++   w+ +Ly
   mKIAA1322   494 FFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLY 543  

                   attlPleeAlrIfDiLFadGivllfrvaLAvLkilkeqiLda<-*
                     +lPl+ A rI+D +  dG   lfr aL +Lk + e+iL     
   mKIAA1322   544 SKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLF-EDILTR    584  

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