hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg13653/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0455  ( 795 res)   mbg13653

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
acidPPc  Acid phosphatase homologues                     78.3    9.7e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
acidPPc    1/1     209   353 ..     1   161 []    78.3  9.7e-19

Alignments of top-scoring domains:
acidPPc: domain 1 of 1, from 209 to 353: score 78.3, E = 9.7e-19
                   *->vglllllvaavsalfnlisaiKlvfgrpRPfflslckpdhsavddtd
                      vg+++++ + ++al+++i  i+l  g + P+fl +ckp ++ ++   
   mKIAA0455   209    VGVHVFG-LCSTALITDI--IQLSTGYQAPYFLTVCKPNYTSLN--- 249  

                   ktrtre.ak.qi.sakdvcctpnfllvleagySFPSGHtafaaafalfll
                        ++ k+ + +  d+c  +    +  +++SFPS H+++aa+ a++++
   mKIAA0455   250 -----VsCKeNSyIVEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVS 294  

                   lylparatsrgakqiSqlfrllrklliilllllalvvgfSRvylgvHyps
                    y+   +t +++        ll++ll+++++++++++g+ R++ ++ +p+
   mKIAA0455   295 MYFNSTLTDSSK--------LLKPLLVFTFIICGIICGLTRITQYKNHPV 336  

                   DVlAGlllGilvallll<-*
                   DV  G+l+G  +al+l    
   mKIAA0455   337 DVYCGFLIGGGIALYLG    353  

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