hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/smart.HMMs Sequence file: /cdna4/rodent/full/goal/mpm/mpm09073/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0348 ( 1299 res) mpm09073 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IPPc Inositol polyphosphate phosphatase, catalyti 440.6 8.4e-128 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IPPc 1/1 393 735 .. 1 435 [] 440.6 8.4e-128 Alignments of top-scoring domains: IPPc: domain 1 of 1, from 393 to 735: score 440.6, E = 8.4e-128 *->rdikvlvgTwNvngqf.krseadpkvdvtswLfqkid...kedevkq ++i++ vgTwNvng++++rs ++ +t+wL + ++ ++ d +++ mKIAA0348 393 KRIQIAVGTWNVNGGKqFRSNLLGTAELTDWLLDAPQlsgAVDSQDD 439 sekpDiyviGlQEvggkkyeesilqvdkivkellsnalkkkillrsfele ++D ++iG++E+ +el+ mKIAA0348 440 GSPADVFAIGFEEM--------------------------------VELS 457 agsilesiaakerlWsellesslnevsgksqynvlaserelvgilllvfv ag+i+++ +++++ W e l++++ s+ +y++l+s + lvg++l +fv mKIAA0348 458 AGNIVNASTTNRKMWGEQLQKAI---SRSHRYILLTSAQ-LVGVCLYIFV 503 kanelkkikdvevktvktGmggltGnKGavaVrfklhdtEgqysfcfVNs ++ + ++i+dv+ +tvktGmgg++GnKGav++rf+lh+t sfcfV+s mKIAA0348 504 RPYHVPFIRDVAIDTVKTGMGGKAGNKGAVGIRFQLHST----SFCFVCS 549 HLaagesNLanveqRnqdYktIrlralsFperketsqrnrflevgkdnIl HL+ag+s +v++Rn+dY++I +lsFp ++ I+ mKIAA0348 550 HLTAGQS---QVKERNEDYREI-THKLSFPSGRN--------------IF 581 dhdvvFWfGDLNyRldspsylevlvadaeqqtvlAddlnliaaeldvirk +hd+vFW+GD+NyR+d+++ mKIAA0348 582 SHDYVFWCGDFNYRIDLTY------------------------------- 600 vseevrrkIskkekevfdeLlekdQLnrqkeagkvFkgFqEgkIkFpPTY eev ++++++ +++L e+dQL +qk gk+Fk+F+Eg ++F PTY mKIAA0348 601 --EEVFYFVKRQD---WKKLMEFDQLQLQKSSGKIFKDFHEGAVNFGPTY 645 KydredsvgtetYDtsEKkRvPAWcDRILyrs.Krqf.eaapnliqlses Kyd vg++ YDts K+R+PAW+DR+L+ ++K +++++a +l++l+ s mKIAA0348 646 KYD----VGSAAYDTSDKCRTPAWTDRVLWWRkKHPYdKTAGELNLLD-S 690 yfp.vvssiyqeekvvtyyysgmelttSDHkPVfAtFrlkvkkvd<-* + ++ + ++ ++++ yy ++el +SDH+PV A+++++v +vd mKIAA0348 691 DLDgDPQIRHTWSPGTLKYYGRAELQASDHRPVLAIVEVEVQEVD 735 //