hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mef/mef00119/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0321  ( 2548 res)   mef00119

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FYVE     Protein present in Fab1, YOTB, Vac1, and EEA   106.2    3.6e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FYVE       1/1    1813  1882 ..     1    81 []   106.2  3.6e-27

Alignments of top-scoring domains:
FYVE: domain 1 of 1, from 1813 to 1882: score 106.2, E = 3.6e-27
                   *->etaphWvpDeeasnClmnC.gkeFtlvtrRrHHCRnCGrifCskCss
                      + +++WvpDe+ s+C m C +++Ft+ ++RrHHCR CGr++C++Cs+
   mKIAA0321  1813    PARDQWVPDETESVC-MVCcREHFTM-FNRRHHCRRCGRLVCGSCST 1857 

                   kkaplpklgkekkngknedftpvRVCdsCyerlsk<-*
                   kk+ ++ ++++          p RVCd Cy+ ++k   
   mKIAA0321  1858 KKMVVEGFREN----------PTRVCDQCYSYYNK    1882 

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