hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mph/mph02182/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0049  ( 915 res)   mph02182

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ZnF_ZZ   Zinc-binding domain, present in Dystrophin,     59.9    3.2e-13   1
OPR      Octicosapeptide repeat                          51.2    1.3e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
OPR        1/1      52    81 ..     1    30 []    51.2  1.3e-10
ZnF_ZZ     1/1     221   266 ..     1    46 []    59.9  3.2e-13

Alignments of top-scoring domains:
OPR: domain 1 of 1, from 52 to 81: score 51.2, E = 1.3e-10
                   *->tvtikYiDeDGDlVtivSdeDleeAlelar<-*
                      t++ikY+De++++++i+S++++eeAl++a+   
   mKIAA0049    52    TIQIKYLDEENEEISINSQGEYEEALKMAN    81   

ZnF_ZZ: domain 1 of 1, from 221 to 266: score 59.9, E = 3.2e-13
                   *->vhhsvsCdgCgkepivgvRYkClvCpDYDLCesCfakG.ghhgeHam
                      ++++ +C++C+k +ivgvRY+C++Cp Y++Ce+C+a +  h ++H +
   mKIAA0049   221    FSWHIACSHCQK-RIVGVRYQCSLCPSYNICEDCEAGPyTHDTNHVL 266  

                   <-*
                      
   mKIAA0049     -     -    

//