FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0982.ptfa, 504 aa vs ./tmplib.26680 library 1768513 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.9161+/-0.00499; mu= 15.1055+/- 0.333 mean_var=131.8035+/-32.036, 0's: 0 Z-trim: 14 B-trim: 0 in 0/36 Lambda= 0.1117 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4167 ( 342 res) mpj04828 ( 342) 275 55 7.4e-09 mKIAA4123 ( 639 res) mbg05860 ( 639) 214 46 9.5e-06 mKIAA0893 ( 1132 res) mbg01684 (1132) 165 39 0.0031 mKIAA4156 ( 368 res) mfj52041 ( 368) 157 37 0.0041 >>mKIAA4167 ( 342 res) mpj04828 (342 aa) initn: 236 init1: 131 opt: 275 Z-score: 251.4 bits: 55.5 E(): 7.4e-09 Smith-Waterman score: 275; 26.894% identity (29.832% ungapped) in 264 aa overlap (154-403:87-338) 130 140 150 160 170 180 mKIAA0 SQLSQKLKTTYKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTA :. : :: : ::. . .. : .: mKIAA4 SSVKFSPNGEWLASSAADALIIIWGAYDGNCK--KTLYGHSLEISDVAWS-SDSSRLVSA 60 70 80 90 100 110 190 200 210 220 230 240 mKIAA0 SADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQ--LP : :.: .:....:::: :: : :.: .: ...: :....::. . : mKIAA4 SDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLK 120 130 140 150 160 170 250 260 270 280 290 mKIAA0 T----PQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSHQGVVIA- : .:.. .. . .: . : : .:..: : .: .. . .. mKIAA4 TLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC------LRTLADEGNPPVSF 180 190 200 210 220 300 310 320 330 340 350 mKIAA0 ADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQELTHCC----THPTQRLVVTSS . . .:: ..::. : : .:.: .. ... ::: .: .: . .. ::..: mKIAA4 VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNE-KYCLFASFSVTGRKWVVSGS 230 240 250 260 270 280 360 370 380 390 400 mKIAA0 RDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGS---DDRTVKVWDLKNMR .:. .:... : :. .:::::.: ::. :..... .:.:.:::. mKIAA4 EDNMVYIWNLQTKEI--VQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSDC 290 300 310 320 330 340 410 420 430 440 450 460 mKIAA0 SPIATIRTDSAINRINVCVGQKIIALPHDNRQVRLFDMSGVRLARLPRSSRQGHRRMVCC >>mKIAA4123 ( 639 res) mbg05860 (639 aa) initn: 218 init1: 97 opt: 214 Z-score: 195.6 bits: 46.1 E(): 9.5e-06 Smith-Waterman score: 317; 28.571% identity (31.461% ungapped) in 294 aa overlap (134-415:302-580) 110 120 130 140 150 mKIAA0 AIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAIC-----QLVK :.: ::.....: : : : .. mKIAA4 LWRGLAERRGWGQYLFKNKPPDENAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIH 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA0 EYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPS :.. .. : :: : :.: .:. : .: .::.::: ... . mKIAA4 CRSETSKGVYCLQYD-DQKIVSGLR--DNTIKIWDKSTLECKRILTGHTGSVLCLQY--D 340 350 360 370 380 220 230 240 250 260 270 mKIAA0 EQLALTASGDQTAHIWRY----VVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVS :.. .:.:.:.:...: ... . : .... . :: ::. :.. mKIAA4 ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCS-KDRSIAVWDMA 390 400 410 420 430 440 280 290 300 310 320 330 mKIAA0 SDCPTVRVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQ : :: . : .:...: ..:. : .:.:: ::: ..... : :.:..:.:: . mKIAA4 S--PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 450 460 470 480 490 500 340 350 360 370 380 390 mKIAA0 ELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSG .. : . .::::..: :.:.::::.. . . :..:: . : : . .::: mKIAA4 GIA--CLQYRDRLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFD-NKRIVSG 510 520 530 540 550 400 410 420 430 440 450 mKIAA0 SDDRTVKVWDLK---NMRSPIATIRTDSAINRINVCVGQKIIALPHDNRQVRLFDMSGVR . : .::::: . :.: .:. mKIAA4 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 560 570 580 590 600 610 >>mKIAA0893 ( 1132 res) mbg01684 (1132 aa) initn: 182 init1: 91 opt: 165 Z-score: 150.5 bits: 38.5 E(): 0.0031 Smith-Waterman score: 193; 20.513% identity (22.776% ungapped) in 312 aa overlap (209-493:821-1128) 180 190 200 210 220 230 mKIAA0 VLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVV .: .. :::: .: ..:...: .. : mKIAA0 SSGNLSRSKGEEDDKSKKQFVCINTLEDTQAVRAVAFHPSGSLYAVGSNSKTLRVCAYPE 800 810 820 830 840 850 240 250 260 270 280 mKIAA0 QLP-----TP-QPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRV---------- .. .: :::. ... . : : . ..:. :.: mKIAA0 KMDASAHDNPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNA 860 870 880 890 900 910 290 300 310 320 330 mKIAA0 --PLTSLKSHQGVVIAADWLVG---GKQVVTASWDRTANLY--DVETSELVHSLTGHDQE : .. :.:.. .. : : .. .. :.: : . .. .:.:.:: . mKIAA0 TGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGH 920 930 940 950 960 970 340 350 360 370 380 390 mKIAA0 LTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSV--NVFQGHTDTVTS-AVFTVGDNVV . : . .....:.: : :.::.: :: : ..:.: ..:.: :: : .. mKIAA0 ILALYTW-SGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLA 980 990 1000 1010 1020 400 410 420 430 440 450 mKIAA0 SGSDDRTVKVWDLKNMRSPIATIRTDSAINRINVCVGQKIIALPHDNRQVRLFDMSGVRL .:..: . ..:... : . .: . . : . . . .... :..: mKIAA0 TGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLT 1030 1040 1050 1060 1070 1080 460 470 480 490 500 mKIAA0 ARLPRSSRQGHR-RMVCCSAWSEDHPICNLFTCGFDRQAIGWNINIPALLQEK .:: :. ... : ..: .... . :: . :. mKIAA0 KQLPLMVVGEHKDKVIQCRWHTQD---LSFLSSSADRTVTLWTYSG 1090 1100 1110 1120 1130 >>mKIAA4156 ( 368 res) mfj52041 (368 aa) initn: 145 init1: 114 opt: 157 Z-score: 148.3 bits: 36.5 E(): 0.0041 Smith-Waterman score: 157; 23.902% identity (26.064% ungapped) in 205 aa overlap (254-450:87-282) 230 240 250 260 270 280 mKIAA0 TASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVP .:: : :: : : :: . : mKIAA4 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSI-----VLYDCQEGK-P 60 70 80 90 100 110 290 300 310 320 330 340 mKIAA0 LTSLKSHQGVVIAADWLVGGKQVVTAS--WDRTANLYDVETSELVHSLTGHDQELTHCCT .: :.. : . ... :: .: : : ... .. .. . ::..... mKIAA4 KRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSM 120 130 140 150 160 170 350 360 370 380 390 400 mKIAA0 HPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVK :.. ...: : :.::::.:.:. ... .::. . . : ..: ... :: mKIAA4 SPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKP---VCSFDPEGLIFAAGVNSEMVK 180 190 200 210 220 410 420 430 440 450 mKIAA0 VWDLKNM-RSPIATIRT--DSAINRINVCVGQ--KIIALPHDNRQVRLFD-MSGVRLARL ..::... ..:.::.. : . . .. .. :.: . .. .::.: ..:: mKIAA4 LYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTF 230 240 250 260 270 280 460 470 480 490 500 mKIAA0 PRSSRQGHRRMVCCSAWSEDHPICNLFTCGFDRQAIGWNINIPALLQEK mKIAA4 GGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNP 290 300 310 320 330 340 504 residues in 1 query sequences 1768513 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:33:18 2006 done: Mon Mar 27 10:33:18 2006 Scan time: 0.710 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]