Comparison of KIAA cDNA sequences between mouse and human (KIAA0050)
<<Original sequence data>>
mouse mKIAA0050 (mnj11353) length: 536 bp, CDS: 2 - 478
human KIAA0050 (ha01557) length: 2494 bp, CDS: 21 - 2411
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 1934 - 1934 0 1 100.0
CDS: 1935 - 2411 429 48 10.1
3'UTR: 2412 - 2487 39 21 35.0
amino acid
CDS: 1935 - 2411 153 6 3.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mnj11353 1 .................................................. 1
ha01557 1 GGGGTGAGAGCTCCTCCTAGGACACCCCTTTCCCCTTGGGGAAAGAATTG 50
D T P F P L G K E L
51 ----+----*----+----*----+----*----+----*----+----* 100
mnj11353 1 .................................................. 1
ha01557 51 TGCCCCCAGGCCCTTCCCCGCGGAGGTCCCTCTCCTCCTTCCCCCTCATC 100
C P Q A L P R G G P S P P S P S S
101 ----+----*----+----*----+----*----+----*----+----* 150
mnj11353 1 .................................................. 1
ha01557 101 TCCCCTTCCTGGGACAGAAAGTGCCTCCACCTGCATCCCCAGGGGCCCGG 150
P L P G T E S A S T C I P R G P A
151 ----+----*----+----*----+----*----+----*----+----* 200
mnj11353 1 .................................................. 1
ha01557 151 CCTCCAGGGCCCGCTGGCCCCACAGCAGGCAAGCTGAGATGACGGTCAAG 200
S R A R W P H S R Q A E M T V K
201 ----+----*----+----*----+----*----+----*----+----* 250
mnj11353 1 .................................................. 1
ha01557 201 CTGGATTTCGAGGAGTGTCTCAAGGACTCACCCCGTTTCCGAGCCTCTAT 250
L D F E E C L K D S P R F R A S I
251 ----+----*----+----*----+----*----+----*----+----* 300
mnj11353 1 .................................................. 1
ha01557 251 TGAGCTGGTGGAAGCCGAAGTGTCAGAATTGGAGACCCGTCTGGAAAAGC 300
E L V E A E V S E L E T R L E K L
301 ----+----*----+----*----+----*----+----*----+----* 350
mnj11353 1 .................................................. 1
ha01557 301 TCCTGAAACTGGGCACTGGTCTCCTGGAAAGTGGGCGCCATTACCTTGCT 350
L K L G T G L L E S G R H Y L A
351 ----+----*----+----*----+----*----+----*----+----* 400
mnj11353 1 .................................................. 1
ha01557 351 GCCAGCCGCGCCTTCGTTGTCGGCATTTGTGACCTGGCCCGCCTGGGTCC 400
A S R A F V V G I C D L A R L G P
401 ----+----*----+----*----+----*----+----*----+----* 450
mnj11353 1 .................................................. 1
ha01557 401 ACCAGAGCCCATGATGGCGGAGTGTCTGGAAAAATTCACCGTGAGCCTGA 450
P E P M M A E C L E K F T V S L N
451 ----+----*----+----*----+----*----+----*----+----* 500
mnj11353 1 .................................................. 1
ha01557 451 ACCACAAGCTGGACAGCCATGCGGAGCTTCTAGATGCCACCCAACACACA 500
H K L D S H A E L L D A T Q H T
501 ----+----*----+----*----+----*----+----*----+----* 550
mnj11353 1 .................................................. 1
ha01557 501 CTGCAGCAGCAGATCCAGACCCTGGTCAAGGAAGGTCTGCGGGGTTTCCG 550
L Q Q Q I Q T L V K E G L R G F R
551 ----+----*----+----*----+----*----+----*----+----* 600
mnj11353 1 .................................................. 1
ha01557 551 AGAGGCTCGCCGGGATTTCTGGCGGGGGGCTGAGAGCCTGGAGGCTGCCC 600
E A R R D F W R G A E S L E A A L
601 ----+----*----+----*----+----*----+----*----+----* 650
mnj11353 1 .................................................. 1
ha01557 601 TGACCCACAACGCAGAGGTTCCCAGGCGCCGGGCCCAGGAGGCAGAAGAG 650
T H N A E V P R R R A Q E A E E
651 ----+----*----+----*----+----*----+----*----+----* 700
mnj11353 1 .................................................. 1
ha01557 651 GCAGGAGCTGCTTTGAGGACGGCTCGAGCTGGGTACCGGGGACGGGCACT 700
A G A A L R T A R A G Y R G R A L
701 ----+----*----+----*----+----*----+----*----+----* 750
mnj11353 1 .................................................. 1
ha01557 701 GGATTATGCCCTGCAGATCAACGTGATTGAGGACAAGAGGAAGTTTGACA 750
D Y A L Q I N V I E D K R K F D I
751 ----+----*----+----*----+----*----+----*----+----* 800
mnj11353 1 .................................................. 1
ha01557 751 TCATGGAGTTTGTGCTGCGTTTGGTGGAGGCCCAGGCTACCCATTTCCAG 800
M E F V L R L V E A Q A T H F Q
801 ----+----*----+----*----+----*----+----*----+----* 850
mnj11353 1 .................................................. 1
ha01557 801 CAGGGCCATGAGGAGCTGAGCCGGCTGTCCCAGTATCGAAAGGAGCTGGG 850
Q G H E E L S R L S Q Y R K E L G
851 ----+----*----+----*----+----*----+----*----+----* 900
mnj11353 1 .................................................. 1
ha01557 851 CGCCCAGTTGCACCAGCTGGTCTTGAATTCAGCACGAGAGAAGAGGGACA 900
A Q L H Q L V L N S A R E K R D M
901 ----+----*----+----*----+----*----+----*----+----* 950
mnj11353 1 .................................................. 1
ha01557 901 TGGAGCAGAGACACGTGCTGCTGAAACAGAAGGAGCTGGGTGGGGAGGAG 950
E Q R H V L L K Q K E L G G E E
951 ----+----*----+----*----+----*----+----*----+----* 1000
mnj11353 1 .................................................. 1
ha01557 951 CCAGAACCAAGCTTAAGAGAGGGGCCTGGTGGCCTGGTGATGGAAGGACA 1000
P E P S L R E G P G G L V M E G H
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mnj11353 1 .................................................. 1
ha01557 1001 TCTCTTCAAACGGGCCAGCAACGCATTTAAGACCTGGAGCAGACGCTGGT 1050
L F K R A S N A F K T W S R R W F
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mnj11353 1 .................................................. 1
ha01557 1051 TCACCATTCAGAGCAACCAACTGGTTTACCAGAAGAAGTACAAGGACCCT 1100
T I Q S N Q L V Y Q K K Y K D P
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mnj11353 1 .................................................. 1
ha01557 1101 GTGACTGTGGTGGTGGATGACCTTCGTCTCTGCACAGTGAAACTCTGCCC 1150
V T V V V D D L R L C T V K L C P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mnj11353 1 .................................................. 1
ha01557 1151 TGACTCAGAAAGGCGGTTCTGCTTTGAGGTGGTGTCCACCAGCAAGTCCT 1200
D S E R R F C F E V V S T S K S C
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mnj11353 1 .................................................. 1
ha01557 1201 GCCTCCTCCAGGCTGACTCAGAGCGCCTCCTGCAGCTGTGGGTCAGTGCT 1250
L L Q A D S E R L L Q L W V S A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mnj11353 1 .................................................. 1
ha01557 1251 GTGCAGAGCAGCATTGCTTCTGCCTTCAGTCAGGCTCGCCTTGATGACAG 1300
V Q S S I A S A F S Q A R L D D S
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mnj11353 1 .................................................. 1
ha01557 1301 CCCCCGGGGTCCAGGCCAGGGCTCAGGACACCTGGCCATAGGCTCTGCTG 1350
P R G P G Q G S G H L A I G S A A
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mnj11353 1 .................................................. 1
ha01557 1351 CCACCCTGGGCTCTGGTGGAATGGCCAGGGGAAGGGAGCCTGGGGGAGTC 1400
T L G S G G M A R G R E P G G V
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mnj11353 1 .................................................. 1
ha01557 1401 GGGCACGTGGTGGCCCAGGTCCAGAGTGTGGATGGCAATGCCCAGTGCTG 1450
G H V V A Q V Q S V D G N A Q C C
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mnj11353 1 .................................................. 1
ha01557 1451 CGACTGCCGGGAGCCAGCCCCGGAGTGGGCCAGCATCAACCTTGGTGTCA 1500
D C R E P A P E W A S I N L G V T
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mnj11353 1 .................................................. 1
ha01557 1501 CCCTCTGCATTCAGTGTTCCGGCATCCACAGGAGCCTTGGTGTTCACTTC 1550
L C I Q C S G I H R S L G V H F
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mnj11353 1 .................................................. 1
ha01557 1551 TCCAAAGTCCGGTCTCTGACCCTTGACTCATGGGAGCCAGAACTAGTGAA 1600
S K V R S L T L D S W E P E L V K
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mnj11353 1 .................................................. 1
ha01557 1601 GCTCATGTGTGAGCTGGGAAATGTCATCATCAACCAGATCTATGAGGCCC 1650
L M C E L G N V I I N Q I Y E A R
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mnj11353 1 .................................................. 1
ha01557 1651 GCGTGGAGGCCATGGCAGTGAAGAAACCAGGGCCCAGCTGCTCCCGGCAG 1700
V E A M A V K K P G P S C S R Q
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mnj11353 1 .................................................. 1
ha01557 1701 GAGAAGGAGGCCTGGATTCACGCTAAATACGTGGAGAAGAAGTTCCTGAC 1750
E K E A W I H A K Y V E K K F L T
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mnj11353 1 .................................................. 1
ha01557 1751 CAAGCTGCCTGAGATTCGAGGGCGAAGAGGTGGCCGGGGGCGCCCAAGGG 1800
K L P E I R G R R G G R G R P R G
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mnj11353 1 .................................................. 1
ha01557 1801 GGCAGCCTCCTGTGCCCCCAAAGCCTTCCATCAGGCCCCGGCCAGGGAGC 1850
Q P P V P P K P S I R P R P G S
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mnj11353 1 .................................................. 1
ha01557 1851 TTGAGATCCAAGCCAGAGCCCCCCTCTGAGGACCTGGGAAGCCTGCACCC 1900
L R S K P E P P S E D L G S L H P
1901 ----+----*----+----*----+----*----+----*----+----* 1950
P H L P T M
mnj11353 1 .................................CCCCCATCTTCCTACCA 17
|| |||||| ||||
ha01557 1901 TGGGGCCCTACTGTTTCGAGCGTCTGGGCATCCTCCATCTCTTCCCACCA 1950
G A L L F R A S G H P P S L P T M
1951 ----+----*----+----*----+----*----+----*----+----* 2000
A D A L A H G A D V N W V N V G
mnj11353 18 TGGCTGATGCCCTGGCCCATGGAGCTGATGTCAACTGGGTCAATGTGGGC 67
||||||||||||| ||||||||||||||||||||||||||||||| ||||
ha01557 1951 TGGCTGATGCCCTTGCCCATGGAGCTGATGTCAACTGGGTCAATGGGGGC 2000
A D A L A H G A D V N W V N G G
2001 ----+----*----+----*----+----*----+----*----+----* 2050
Q G N A T P L I R A T A A N S L L
mnj11353 68 CAGGGGAATGCCACACCTCTGATCCGGGCCACAGCTGCTAACTCTCTTCT 117
|| | ||||||||||| ||||||| ||||||||||||||| ||||||||
ha01557 2001 CAAGATAATGCCACACCGCTGATCCAGGCCACAGCTGCTAATTCTCTTCT 2050
Q D N A T P L I Q A T A A N S L L
2051 ----+----*----+----*----+----*----+----*----+----* 2100
A C E F L L Q N G A N V N Q A D S
mnj11353 118 GGCCTGCGAGTTTCTCCTCCAAAATGGGGCGAATGTGAACCAAGCAGACA 167
|||||| |||||||||||||| || |||||||| ||||||||||| ||||
ha01557 2051 GGCCTGTGAGTTTCTCCTCCAGAACGGGGCGAACGTGAACCAAGCGGACA 2100
A C E F L L Q N G A N V N Q A D S
2101 ----+----*----+----*----+----*----+----*----+----* 2150
A G R G P L H H A T I L G H T G
mnj11353 168 GTGCCGGCCGGGGTCCTCTCCACCATGCCACCATTCTTGGTCACACAGGG 217
|||| |||||||| || || ||||| || ||||||||||| ||||| |||
ha01557 2101 GTGCGGGCCGGGGCCCGCTGCACCACGCAACCATTCTTGGCCACACGGGG 2150
A G R G P L H H A T I L G H T G
2151 ----+----*----+----*----+----*----+----*----+----* 2200
L A C L F L K R G A D L G A R D T
mnj11353 218 CTCGCTTGCCTGTTCCTGAAACGGGGTGCTGATCTGGGGGCTCGAGACAC 267
||||| |||||||||||||||||||| ||||||||||||||||||||| |
ha01557 2151 CTCGCCTGCCTGTTCCTGAAACGGGGAGCTGATCTGGGGGCTCGAGACTC 2200
L A C L F L K R G A D L G A R D S
2201 ----+----*----+----*----+----*----+----*----+----* 2250
E G R D P L T I A M E T T N A D I
mnj11353 268 AGAAGGCAGGGACCCTCTGACTATCGCAATGGAAACCACTAATGCTGACA 317
|||||||||||||||||||| ||||| |||||||| | || |||||||
ha01557 2201 TGAAGGCAGGGACCCTCTGACCATCGCCATGGAAACAGCCAACGCTGACA 2250
E G R D P L T I A M E T A N A D I
2251 ----+----*----+----*----+----*----+----*----+----* 2300
V T L L R L A K M R E A E A A Q
mnj11353 318 TCGTAACCCTGCTACGATTGGCAAAGATGAGGGAGGCTGAAGCGGCCCAG 367
|||| |||||||||||| ||||||||||||||||||||||||||||||||
ha01557 2251 TCGTCACCCTGCTACGACTGGCAAAGATGAGGGAGGCTGAAGCGGCCCAG 2300
V T L L R L A K M R E A E A A Q
2301 ----+----*----+----*----+----*----+----*----+----* 2350
G Q A G D E T Y L D I F R D F S L
mnj11353 368 GGCCAGGCAGGAGACGAGACGTATCTCGACATATTCCGAGACTTCTCCCT 417
|| ||||||||||| ||||||||||| ||||| ||||| |||||||||||
ha01557 2301 GGGCAGGCAGGAGATGAGACGTATCTTGACATCTTCCGCGACTTCTCCCT 2350
G Q A G D E T Y L D I F R D F S L
2351 ----+----*----+----*----+----*----+----*----+----* 2400
M A S D D P E K L S R R S H D L H
mnj11353 418 CATGGCGTCGGACGACCCAGAGAAACTGAGCCGTCGCAGTCACGACCTCC 467
||||||||| |||||||| ||||| ||||||||||||||||| |||||||
ha01557 2351 CATGGCGTCAGACGACCCGGAGAAGCTGAGCCGTCGCAGTCATGACCTCC 2400
M A S D D P E K L S R R S H D L H
2401 ----+----*----+----*----+----*----+----*----+----* 2450
T L *
mnj11353 468 ATACTCTGTGATTCCAGGC.................TCCTCCCCACCCTG 500
| || |||||| | |||| |||||| ||| |
ha01557 2401 ACACGCTGTGACCCGAGGCCCACGGGGCCCGCGCCTGCCTCCCTTCCCCG 2450
T L *
2451 ----+----*----+----*----+----*----+----*---- 2494
mnj11353 501 CCCCATTGAAGTCT.CCATTAAAGTCTCTCAGCTTGG....... 536
|| | | ||| ||||||||| ||| |||| |
ha01557 2451 CCACCGGGCCCTCTGCCATTAAAGCCTCCGTGCTTCGCTCTTCC 2494