FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0981.ptfa, 2117 aa vs ./tmplib.26680 library 1766900 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.2475+/-0.00568; mu= 15.1596+/- 0.379 mean_var=150.1815+/-34.994, 0's: 0 Z-trim: 15 B-trim: 56 in 1/35 Lambda= 0.1047 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 43, opt: 31, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1643 ( 950 res) mbh04344 ( 950) 262 53 6.5e-07 mKIAA0305 ( 1536 res) mbg08215 (1536) 239 49 9.9e-06 mKIAA4212 ( 600 res) mbg08227 ( 600) 221 46 3.5e-05 mKIAA1589 ( 775 res) mbh04724 ( 775) 213 45 9.6e-05 mKIAA1362 ( 1407 res) mia41047 (1407) 216 46 0.0001 mFLJ00238 ( 1452 res) mfj01101 (1452) 213 45 0.00014 mKIAA0647 ( 1186 res) mbg01911 (1186) 207 44 0.00024 mKIAA1255 ( 176 res) mbg10338 ( 176) 186 40 0.00061 mKIAA0993 ( 646 res) mbg00079 ( 646) 192 42 0.00077 mKIAA1537 ( 628 res) mbg18407 ( 628) 191 42 0.00084 mKIAA0321 ( 2548 res) mef00119 (2548) 177 40 0.009 >>mKIAA1643 ( 950 res) mbh04344 (950 aa) initn: 233 init1: 233 opt: 262 Z-score: 216.5 bits: 52.6 E(): 6.5e-07 Smith-Waterman score: 262; 41.892% identity (43.056% ungapped) in 74 aa overlap (162-233:862-935) 140 150 160 170 180 mKIAA0 KAEPACGGHDPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQ--YWMPDSQCKECYDCSE . .:..:.:... :.:: : : .:. mKIAA1 KEKLKKVTQTLRSAALEDCALCQETVSSSELAAKTRDGDFEDPPEWVPDEACGFCTSCKA 840 850 860 870 880 890 190 200 210 220 230 240 mKIAA0 KFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSI ::..::.:::: ::.:::::: .. : .: . .:.::.: mKIAA1 PFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKTGM 900 910 920 930 940 950 250 260 270 280 290 300 mKIAA0 GEDLNALSDSTCSVSILDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNSALSTRL >>mKIAA0305 ( 1536 res) mbg08215 (1536 aa) initn: 263 init1: 216 opt: 239 Z-score: 195.3 bits: 49.3 E(): 9.9e-06 Smith-Waterman score: 246; 25.893% identity (30.052% ungapped) in 224 aa overlap (156-363:726-934) 130 140 150 160 170 180 mKIAA0 VLDSRRKAEPACGGHDPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECY :: . .. :..: . :.:::. .:. mKIAA0 SFNSNYIDIESNFEDGSSFVTANKDSLPENKRKESLVLGQKQPT-----WVPDSEAPNCM 700 710 720 730 740 750 190 200 210 220 230 240 mKIAA0 DCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRK-IALSYAHST .:. ::: .:::::: ::..::. :::.. ... . :.:. : . : . : mKIAA0 NCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL--EKEARVCVICYETINKAQAFER 760 770 780 790 800 250 260 270 280 290 mKIAA0 DSNSIGEDLNALSDSTCSV--------SILDPSEPRTPVGSRKASRNIF----LEDDLAW . : :.. .. :.. . :: :... : :. :. .: mKIAA0 MMSPGGSCLKSNHSNECATDQPLQETQTSSTPSPTTLPISALKQP-NVEGPCSKEQKRVW 810 820 830 840 850 860 300 310 320 330 340 mKIAA0 -QSLIHPDSSNSALSTRLVSVQEDAGK--SPARNRSASITNLSLDRSGSPMVPSYETSVS . : :.. . : .:.: : .. . ::. .. : ..::. :: : . ..... mKIAA0 FADGILPNG-EVADTTKLSSGSKRCSDDFSPVLPDVPTMIN-KVDRTHSPTVEKPNNGLG 870 880 890 900 910 920 350 360 370 380 390 400 mKIAA0 PQANRNYIRTETTEDERKILLDSAQLKDLWKKICHHTSGMEFQDHRYWLRTHPNCIVGKE . ::.: ... mKIAA0 -----DIIRSEISQSPTCHTAPVERLPGNTGTEGLPMPGPFTLEDDVFVDSEEPSTPTVV 930 940 950 960 970 980 >>mKIAA4212 ( 600 res) mbg08227 (600 aa) initn: 122 init1: 122 opt: 221 Z-score: 185.4 bits: 46.2 E(): 3.5e-05 Smith-Waterman score: 232; 25.862% identity (28.481% ungapped) in 174 aa overlap (73-246:443-600) 50 60 70 80 90 100 mKIAA0 SPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERGEGGQGEQQSPSSSWASPQIPSR .. .::. .. : : : ... : . .. mKIAA4 KLQQELSGRGSALQLQLSQLRDQCSGLEKELKSEKEQRQALQRELQREKDT--SCLLQTE 420 430 440 450 460 470 110 120 130 140 150 160 mKIAA0 TQSVRSPVPYKKQLNEELHRRSSVLDSRRKAEPACGGHDPRTAVQLRSLSTVLKRLKEIM :.:.. ..:..: . .: . ...: : : .. ....... : : :: mKIAA4 LQQVEGLKKELRELQDEKAELRKVCEEQEQALQEMGLHLSQSKLKMEDIKEVNKALK--- 480 490 500 510 520 170 180 190 200 210 220 mKIAA0 EGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMG :.. :. :.. .: .: . :. ::.:::: ::.:::. : ..:. . . mKIAA4 -GHT--------WLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA--LPS 530 540 550 560 570 230 240 250 260 270 280 mKIAA0 YTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSVSILDPSEPRTPVGSRKASR : .:.: :. . :. :: : mKIAA4 YPKPVRVCDSCHTLLLQRCSSTAS 580 590 600 >>mKIAA1589 ( 775 res) mbh04724 (775 aa) initn: 313 init1: 170 opt: 213 Z-score: 177.5 bits: 45.1 E(): 9.6e-05 Smith-Waterman score: 213; 25.833% identity (29.524% ungapped) in 240 aa overlap (12-235:545-770) 10 20 30 40 mKIAA0 GGGRGGGRPAGPGREAKTHEMATDDKSSPTLDSANDLPRSP :: .: .. ... .. ::. : . .: mKIAA1 CGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDAFLKD--NNNAAQRLLDGMNFMAQS- 520 530 540 550 560 570 50 60 70 80 90 mKIAA0 ASPSHLTHFKPLTP---DQDEPPFKSAYSSFVNL------FRFNKERGEG-GQGEQQSPS .: : : .: :: : . :.... :. : . . . :: : mKIAA1 VSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNQCATSFKDNDTKHHCRACGEGFCDS 580 590 600 610 620 630 100 110 120 130 140 mKIAA0 SSWASPQIPSRTQSVRSPVPYKKQLNEELHRRSSVLDSRRKAEPACGG----HDPRTAVQ : . .: : . :.: . . :. :: . : :: . ::: mKIAA1 CSSKTRPVPERGWG---PAPVRV-CDSCYDARNVQLDVTEADE---GGTLIARKVGEAVQ 640 650 660 670 680 150 160 170 180 190 200 mKIAA0 LRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLCGQIF .:..:. . .: : .:. ::.:: . .:..: ..:.. .:::: ::: : mKIAA1 -NTLGAVVTAI-DIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSVKLSKHHCRACGQGF 690 700 710 720 730 740 210 220 230 240 250 260 mKIAA0 CSRCCN--QEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSVSI :..: . . .:.. :. .:.: : : mKIAA1 CDECSHDCRAVPSR--GWDHPVRVCFNCNKKPGDL 750 760 770 >>mKIAA1362 ( 1407 res) mia41047 (1407 aa) initn: 199 init1: 169 opt: 216 Z-score: 176.9 bits: 45.8 E(): 0.0001 Smith-Waterman score: 223; 27.461% identity (30.286% ungapped) in 193 aa overlap (106-283:1118-1307) 80 90 100 110 120 130 mKIAA0 NKERGEGGQGEQQSPSSSWASPQIPSRTQSVRSPVP--YKKQLNEELHRRSSVLDSRRKA ::.:. :...:. : .:: .:.. : mKIAA1 FLFNDALLYTTPMQSGMYKLNNMLSLAGMKVRKPTQEAYQNELKIESVERSFILSASSAA 1090 1100 1110 1120 1130 1140 140 150 160 170 180 mKIAA0 EPACGGHDPRTAVQLRSLSTVL----KRLKEIMEGKSQDSDL---KQYWMPDSQCKECYD : . .... . . . . : : : : . : : :.::.. :. mKIAA1 ERDDWLEAISSSIEEYAKKRITFCPSRSLDEDSERKEEVSPLGAKAPIWIPDTRATMCMI 1150 1160 1170 1180 1190 1200 190 200 210 220 230 240 mKIAA0 CSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDL-RACTYCRKIALSYAHSTD :. .:: :::::: ::.: :. : ... .. :.: :.: .: . . :. mKIAA1 CTSEFTLTWRRHHCRACGKIVCQACSSNKYGLDYL--KGQLARVCEHCFQELQKLDHQL- 1210 1220 1230 1240 1250 1260 250 260 270 280 290 300 mKIAA0 SNSIGEDLNALSDSTCSVSILD--PS---EPRTPVGSRKASRNIFLEDDLAWQSLIHPDS : .: : : :. :.: :: . . :.. ...: : mKIAA1 SPRVGSPGNHKSPSSALSSVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLYRSKGSK 1270 1280 1290 1300 1310 1320 310 320 330 340 350 360 mKIAA0 SNSALSTRLVSVQEDAGKSPARNRSASITNLSLDRSGSPMVPSYETSVSPQANRNYIRTE mKIAA1 KPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFY 1330 1340 1350 1360 1370 1380 >>mFLJ00238 ( 1452 res) mfj01101 (1452 aa) initn: 198 init1: 162 opt: 213 Z-score: 174.3 bits: 45.4 E(): 0.00014 Smith-Waterman score: 215; 24.645% identity (28.571% ungapped) in 211 aa overlap (143-342:1106-1298) 120 130 140 150 160 170 mKIAA0 KKQLNEELHRRSSVLDSRRKAEPACGGHDPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLK :: :. : : :. . ::. ... mFLJ00 IQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLIELLRDKDALWQKSDALEFQ 1080 1090 1100 1110 1120 1130 180 190 200 210 220 mKIAA0 QYWMPDSQC------KECYDCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGD : . .: ..:.::...:. . ::::::.::.::: :::. . : : mFLJ00 QKLSAEEKCLGDMEVNHCHDCKREFSWIVRRHHCRICGRIFCYYCCNNYVVTKPSGKKE- 1140 1150 1160 1170 1180 1190 230 240 250 260 270 280 mKIAA0 LRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSVSILDPSE--PRTPVGSRKASRNI : : : . . :.::.. : . . : ...:.: :.. .::. . mFLJ00 -RCCRACFQKFGEGSGSNDSSGSGTSQGEPSP------MVSPAEASPQS-IGSQGINSVC 1200 1210 1220 1230 1240 290 300 310 320 330 340 mKIAA0 FLEDDLAWQSLIHPDSSNSALSTRLVSVQEDAG---KSPARNRSASITNLSLDRSGSPMV :: ... . . : ..::... ..:... : . .. : ... .. mFLJ00 RPPDDAVFDIITDEE---------LCQIQESGSSLPETPTETDSMDPNTAEQDTTSNSLT 1250 1260 1270 1280 1290 350 360 370 380 390 400 mKIAA0 PSYETSVSPQANRNYIRTETTEDERKILLDSAQLKDLWKKICHHTSGMEFQDHRYWLRTH : mFLJ00 PEDTEDVPMGQDAEICLLKSGELMIKLPLTVEEVASFGEGSRELFVRSSTYSLITITVAE 1300 1310 1320 1330 1340 1350 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 182 init1: 182 opt: 207 Z-score: 170.5 bits: 44.4 E(): 0.00024 Smith-Waterman score: 207; 30.952% identity (31.325% ungapped) in 84 aa overlap (175-257:1102-1185) 150 160 170 180 190 200 mKIAA0 AVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLCG :.:: . ..:..:. .: .:::::: :: mKIAA0 TEDFGSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCG 1080 1090 1100 1110 1120 1130 210 220 230 240 250 260 mKIAA0 QIFCSRCCNQEIPGKFMGYTGDLRACTYC-RKIALSYAHSTDSNSIGEDLNALSDSTCSV ..::. ::. ..: . . .:. : ..: .: :. :. . . . . :. mKIAA0 NVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQVSRARELMSQHLKKPIATASS 1140 1150 1160 1170 1180 270 280 290 300 310 320 mKIAA0 SILDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNSALSTRLVSVQEDAGKSPARN >>mKIAA1255 ( 176 res) mbg10338 (176 aa) initn: 168 init1: 168 opt: 186 Z-score: 163.0 bits: 40.3 E(): 0.00061 Smith-Waterman score: 186; 36.842% identity (36.842% ungapped) in 57 aa overlap (177-233:110-166) 150 160 170 180 190 200 mKIAA0 QLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLCGQI : . ..::.:. :: . :.:::: ::.. mKIAA1 NNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRL 80 90 100 110 120 130 210 220 230 240 250 260 mKIAA0 FCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSVSIL .: .: ..::: . . .:.:. : mKIAA1 LCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS 140 150 160 170 >>mKIAA0993 ( 646 res) mbg00079 (646 aa) initn: 142 init1: 142 opt: 192 Z-score: 161.3 bits: 41.8 E(): 0.00077 Smith-Waterman score: 192; 36.667% identity (36.667% ungapped) in 60 aa overlap (174-233:570-629) 150 160 170 180 190 200 mKIAA0 TAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHCRLC .:. : : :: .:. .:::::: : mKIAA0 KDHSRILVGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNC 540 550 560 570 580 590 210 220 230 240 250 260 mKIAA0 GQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSTCSV ::.::..: . : . .. .:.: : mKIAA0 GQLFCQKCSRFQSEIKRLKISSPVRVCQNCYYSLQHERGAEDGPRNC 600 610 620 630 640 >>mKIAA1537 ( 628 res) mbg18407 (628 aa) initn: 116 init1: 116 opt: 191 Z-score: 160.6 bits: 41.6 E(): 0.00084 Smith-Waterman score: 192; 25.000% identity (29.457% ungapped) in 152 aa overlap (112-243:477-625) 90 100 110 120 130 140 mKIAA0 GGQGEQQSPSSSWASPQIPSRTQSVRSPVPYKKQLNEELHRRSSVLDSRRKAEPACGGHD ... :.:.:.....::. :. . mKIAA1 LSQSDSLQRQISQKEQQLVQLETDLKIEKEWRQTLQEDLQKEKDVLSHLRHETQKVISLK 450 460 470 480 490 500 150 160 170 180 mKIAA0 PRTAVQLRSLSTVLKR--------LKEI----MEGKSQDSDLKQ--------YWMPDSQC . ..:.. . ::: :.:. :.: . .:.:. :. :.. mKIAA1 -KEFLNLQDENQQLKRIYQEQEQALQELGSKLCESKLKIDDIKEANKALQGLVWLKDKDA 510 520 530 540 550 560 190 200 210 220 230 240 mKIAA0 KECYDCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYA .: : ..:. .:.:::: ::.:::. : ..:.: . . .:.: :. . .. mKIAA1 THCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP--LPSSPKPVRVCDSCHAMLIQRC 570 580 590 600 610 620 250 260 270 280 290 300 mKIAA0 HSTDSNSIGEDLNALSDSTCSVSILDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSS :. mKIAA1 SSNMP 2117 residues in 1 query sequences 1766900 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:33:15 2006 done: Mon Mar 27 10:33:17 2006 Scan time: 1.420 Display time: 0.570 Function used was FASTA [version 3.4t11 Apr 17, 2002]