FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0321.ptfa, 2548 aa vs ./tmplib.26680 library 1766469 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.5853+/-0.00543; mu= 19.8836+/- 0.362 mean_var=140.7961+/-32.727, 0's: 0 Z-trim: 14 B-trim: 136 in 1/35 Lambda= 0.1081 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 44, opt: 32, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1362 ( 1407 res) mia41047 (1407) 261 54 4.7e-07 mKIAA0305 ( 1536 res) mbg08215 (1536) 235 50 8.1e-06 mKIAA1643 ( 950 res) mbh04344 ( 950) 227 48 1.4e-05 mKIAA0993 ( 646 res) mbg00079 ( 646) 210 45 7.2e-05 mKIAA4239 ( 1059 res) mfj24184 (1059) 211 46 8.7e-05 mKIAA4212 ( 600 res) mbg08227 ( 600) 201 44 0.00018 mKIAA1537 ( 628 res) mbg18407 ( 628) 200 44 0.00021 mKIAA1255 ( 176 res) mbg10338 ( 176) 187 41 0.00039 mKIAA0647 ( 1186 res) mbg01911 (1186) 188 42 0.0011 mFLJ00274 ( 1530 res) mpf00869 (1530) 183 42 0.0022 mKIAA1435 ( 411 res) mbp03169 ( 411) 172 39 0.0033 mKIAA0981 ( 2117 res) mib04069 (2117) 177 41 0.0052 mKIAA1589 ( 775 res) mbh04724 ( 775) 168 39 0.0075 >>mKIAA1362 ( 1407 res) mia41047 (1407 aa) initn: 265 init1: 190 opt: 261 Z-score: 219.1 bits: 53.9 E(): 4.7e-07 Smith-Waterman score: 261; 30.435% identity (32.450% ungapped) in 161 aa overlap (1759-1912:1132-1289) 1730 1740 1750 1760 1770 1780 mKIAA0 LLSRYAGKALDLPYPLREKRSDSMIHLQEPVHQASDSETLSRSSSAEFSAAAAPGSALVR .... : :: ::.:: . :. .. mKIAA1 SGMYKLNNMLSLAGMKVRKPTQEAYQNELKIESVERSFILSASSAAERDDWLEAISSSIE 1110 1120 1130 1140 1150 1160 1790 1800 1810 1820 1830 1840 mKIAA0 SPSPKE------RAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRH . :. :.. . . : : : : :.:: ..::.: : ::. ::: mKIAA1 EYAKKRITFCPSRSLDEDSERKEEVSPLGAKA-PIWIPDTRATMCMICTSE-FTLTWRRH 1170 1180 1190 1200 1210 1850 1860 1870 1880 1890 1900 mKIAA0 HCRRCGRLVCGSCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEESPCQSEVPDSAKNES ::: ::..:: .::..:. .. .. . .:::..:.. .: . :: . : . :. : mKIAA1 HCRACGKIVCQACSSNKYGLDYLKGQLARVCEHCFQELQKLDHQLSP-RVGSPGNHKSPS 1220 1230 1240 1250 1260 1270 1910 1920 1930 1940 1950 1960 mKIAA0 PPYSAVVR-VPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGH :.:.. .:. mKIAA1 SALSSVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLYRSKGSKKPWKHLWFVIKNKV 1280 1290 1300 1310 1320 1330 >>mKIAA0305 ( 1536 res) mbg08215 (1536 aa) initn: 246 init1: 127 opt: 235 Z-score: 196.8 bits: 49.9 E(): 8.1e-06 Smith-Waterman score: 235; 31.206% identity (33.846% ungapped) in 141 aa overlap (1764-1901:692-824) 1740 1750 1760 1770 1780 1790 mKIAA0 AGKALDLPYPLREKRSDSMIHLQEPVHQASDSETLSRSSSAEFSAAAAPGSALVRSPSPK ::.. :. .. . ::..: . . mKIAA0 NKPDVVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNFEDGSSFV---TAN 670 680 690 700 710 1800 1810 1820 1830 1840 1850 mKIAA0 ERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHHCRRCGRLVCG . ..:... .: . :. :::: :: :. .::. .:::::: ::.. :: mKIAA0 KDSLPENKRKESLVLGQKQPT---WVPDSEAPNCM-NCQVKFTFTKRRHHCRACGKVFCG 720 730 740 750 760 770 1860 1870 1880 1890 1900 1910 mKIAA0 SCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEE---SPCQSEVPDSAKNESPPYSAVVR : ..: .. . :. .::: :: :: : :: : . .. .:: mKIAA0 VCCNRKCKLQ-YLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQE 780 790 800 810 820 830 1920 1930 1940 1950 1960 1970 mKIAA0 VPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHCCRL mKIAA0 TQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSD 840 850 860 870 880 890 >>mKIAA1643 ( 950 res) mbh04344 (950 aa) initn: 191 init1: 119 opt: 227 Z-score: 192.3 bits: 48.4 E(): 1.4e-05 Smith-Waterman score: 232; 29.677% identity (33.577% ungapped) in 155 aa overlap (1727-1880:802-939) 1700 1710 1720 1730 1740 1750 mKIAA0 NMKVDWATTAVQTLHQLLAGQDIGFTLDEVDSLLSRYAGKALDLPYPLREKRSDSMIHLQ :.: . ::. :: :. ...... mKIAA1 PMATREKIRSRFHGSHDLIHRLFVCISGVADQLQTNYAS---DLRSILK-----TLFEVM 780 790 800 810 820 1760 1770 1780 1790 1800 1810 mKIAA0 EPVHQASDSETLSRSSSAEFSAAAAPGSALVRSPSPKERAFPQTQPPVEFVPPETPPARD ...:.: :.. ... ::: . .. : .: : .:. .: : :: mKIAA1 ATKPETDDKEKLKKVTQTLRSAALEDCALCQETVSSSELA-AKTRDG-DF---EDPP--- 830 840 850 860 870 1820 1830 1840 1850 1860 1870 mKIAA0 QWVPDETESVCMVCCREHFTMFNRRHHCRRCGRLVCGSCSTKKMVVEGFRE-NPTRVCDQ .:::::. . : . :. ::.. :.:::: ::.. :. ::... . . . .:.::: . mKIAA1 EWVPDEACGFC-TSCKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTH 880 890 900 910 920 930 1880 1890 1900 1910 1920 1930 mKIAA0 CYSYYNKDTPEESPCQSEVPDSAKNESPPYSAVVRVPKATEVEWILSLSEEENELVRSEF :: .. mKIAA1 CYMFHVTPFYSDKTGM 940 950 >>mKIAA0993 ( 646 res) mbg00079 (646 aa) initn: 128 init1: 128 opt: 210 Z-score: 179.8 bits: 45.5 E(): 7.2e-05 Smith-Waterman score: 210; 38.462% identity (40.000% ungapped) in 78 aa overlap (1814-1889:567-643) 1790 1800 1810 1820 1830 1840 mKIAA0 SALVRSPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHH : :.:: :: . : : .:.. .:::: mKIAA0 GVSKDHSRILVGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCS-GCSVRFSLTERRHH 540 550 560 570 580 590 1850 1860 1870 1880 1890 1900 mKIAA0 CRRCGRLVCGSCSTKKMVVEGFR-ENPTRVCDQCY-SYYNKDTPEESPCQSEVPDSAKNE :: ::.: : .:: . .. .. .:.:::..:: : .. :..: mKIAA0 CRNCGQLFCQKCSRFQSEIKRLKISSPVRVCQNCYYSLQHERGAEDGPRNC 600 610 620 630 640 1910 1920 1930 1940 1950 1960 mKIAA0 SPPYSAVVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGH >>mKIAA4239 ( 1059 res) mfj24184 (1059 aa) initn: 262 init1: 165 opt: 211 Z-score: 178.3 bits: 45.9 E(): 8.7e-05 Smith-Waterman score: 211; 29.661% identity (32.710% ungapped) in 118 aa overlap (1786-1900:798-907) 1760 1770 1780 1790 1800 1810 mKIAA0 QEPVHQASDSETLSRSSSAEFSAAAAPGSALVRSPSPKERAFPQTQPPVEFVPPETPPAR :. : . .. : ..: :.. : : mKIAA4 QARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNRDDEDTPPNSPNVDLGKRAPTPIR 770 780 790 800 810 820 1820 1830 1840 1850 1860 1870 mKIAA0 DQWVPDETESVCMVCCREHFTMFNRRHHCRRCGRLVCGSCS--TKKMVVEGFRENPTRVC .. : ..:: : . .. .:::::. ::..:::.:: ... .. : : ::: mKIAA4 EKEV-----TMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLIYDNNRSN--RVC 830 840 850 860 870 880 1880 1890 1900 1910 1920 1930 mKIAA0 DQCYSYYNKDTPEESP-CQSEVPDSAKNESPPYSAVVRVPKATEVEWILSLSEEENELVR .:: . .: :: :....:. .. mKIAA4 TDCYVALH-GAPGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLHYMEKGGKGWHKA 890 900 910 920 930 >>mKIAA4212 ( 600 res) mbg08227 (600 aa) initn: 146 init1: 104 opt: 201 Z-score: 172.5 bits: 44.0 E(): 0.00018 Smith-Waterman score: 201; 34.426% identity (35.593% ungapped) in 61 aa overlap (1818-1878:531-589) 1790 1800 1810 1820 1830 1840 mKIAA0 RSPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHHCRRC :. :. . : : .. :.. :.:::: : mKIAA4 ALQEMGLHLSQSKLKMEDIKEVNKALKGHTWLKDDEATHCKQCEKD-FSISRRKHHCRNC 510 520 530 540 550 1850 1860 1870 1880 1890 1900 mKIAA0 GRLVCGSCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEESPCQSEVPDSAKNESPPYSA :.. :..::...... .. .:.::::.:.. mKIAA4 GHIFCNTCSSNELALPSY-PKPVRVCDSCHTLLLQRCSSTAS 560 570 580 590 600 1910 1920 1930 1940 1950 1960 mKIAA0 VVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHC >>mKIAA1537 ( 628 res) mbg18407 (628 aa) initn: 169 init1: 96 opt: 200 Z-score: 171.5 bits: 43.9 E(): 0.00021 Smith-Waterman score: 223; 23.009% identity (27.660% ungapped) in 678 aa overlap (1277-1895:6-628) 1250 1260 1270 1280 1290 mKIAA0 LCLSRQSQQASSLLTHLGMLAREHASHLLDGLPLSTLGSPRP-------SENPSAERKSH : :. .:: : ...:.: .... mKIAA1 PPRACGELLTRSASPCPARTAAMATKDPTAVERAN 10 20 30 1300 1310 1320 1330 1340 mKIAA0 --SSPKDSLPAFTASALAFLKSRSK--------ILAMVACLRTSRGTKVSKPGLSW-KEL . : :. .. :::.: .. .. ...: ::. .: : : ::. : . mKIAA1 LLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLK--HGLKGRKSFLSYNKTI 40 50 60 70 80 90 1350 1360 1370 1380 1390 1400 mKIAA0 RGRREAPLT-AEKVAQECEHL---LEQFPVFEAAL--LANWEPLQQASEPKQSLAASLCG : :: .::. : :.. ....: ... : : : .. . : mKIAA1 WG----PLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMADYLRCLII 100 110 120 130 140 1410 1420 1430 1440 1450 mKIAA0 QANLSTVLLGLHSSLALDILTEAFEGALVARDWPRALQLID----VYGQDLD------DL : .: . . : :: .. : :::... .:..:: : :.::: :. mKIAA1 QRELLSEFYEYH---AL-MMEE--EGAVIV-GLLVGLNVIDANLCVKGEDLDSQVGVIDF 150 160 170 180 190 200 1460 1470 1480 1490 1500 mKIAA0 SIV---------QDSVLTCAAVCDKEGWQYLFPVKDASLRSQLALRFVDKWPLESC--LE :. .. . ::. :.... . . : :.: : ::. . .: mKIAA1 SMYLKNEEEIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSR-VDSLEKSNTKLIE 210 220 230 240 250 260 1510 1520 1530 1540 1550 mKIAA0 ILAYCVSDMA-VQEE---LKSELQRKLMELRVYQKILGLQDPPVWCDWQTLRSCCAEDPS :: ... .::: :.:: . ::. : . .. .. : . :: . mKIAA1 ELAIAKNNIIKLQEENHQLRSENELILMRTRQHLEVTKVD---VETELQTYKHS-----R 270 280 290 300 310 1560 1570 1580 1590 1600 1610 mKIAA0 AVMDMMLDSQEYELCEEWGRLYPIPREHLVSLHHKH----LLHLLERSEHDKA---LQLL .: : .. . .: .: . : :.. :: ..:::.. :.: . : mKIAA1 QGLDEMYNDARRQLRDESQLRQDVENELSVQVGMKHEMELAMKLLEKDIHEKQDTLIGLR 320 330 340 350 360 370 1620 1630 1640 1650 1660 mKIAA0 QRIPD-PTMCLEVTERSLDQHPSLATSHFLANYLTSHFYGELTTDRHREIQALYMGSKVL :.. . .. .:. .: .. .: .. . : . :. :. : : : .. :. mKIAA1 QQLEEVKAINIEMYQRLQGSEDGLKEKNEIIARLEEKTNKITTAMRQLE-QRLQQAEKAQ 380 390 400 410 420 430 1670 1680 1690 1700 1710 1720 mKIAA0 LTLPEQHRASYAR--LSSSPLLMLEQLLMNMKVDWATTAVQTLHQLLAGQDIGFTLDEVD : . .::. ::.: : : ...: : : :: . : : mKIAA1 KE-AEAEDEKYAQECLSQSDSL---QRQISQKE-------QQLVQLETDLKIE---KEWR 440 450 460 470 1730 1740 1750 1760 1770 1780 mKIAA0 SLLSRYAGKALDLPYPLREKRSDSMIHLQEPVHQASDSETLSRSSSAEFSAAAAPGSALV . :.. : :. ::.. . . .: .. .... :.: . . .: :: : mKIAA1 QTLQEDLQKEKDVLSHLRHETQKVISLKKEFLNLQDENQQLKRIYQEQEQALQELGSKLC 480 490 500 510 520 530 1790 1800 1810 1820 1830 1840 mKIAA0 RSPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHHCRRC .: . .. .: :. :. . : .: .: :.. .:.:::: : mKIAA1 ESKLKIDDIKEANKALQGLV----------WLKDKDATHCKLCEKE-FSLSKRKHHCRNC 540 550 560 570 580 1850 1860 1870 1880 1890 1900 mKIAA0 GRLVCGSCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEESPCQSEVPDSAKNESPPYSA :.. :..:: ... . . .:.::::.:... . :.:..: mKIAA1 GEIFCNACSDNELPLPS-SPKPVRVCDSCHAMLIQR------CSSNMP 590 600 610 620 1910 1920 1930 1940 1950 1960 mKIAA0 VVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHC >>mKIAA1255 ( 176 res) mbg10338 (176 aa) initn: 161 init1: 118 opt: 187 Z-score: 166.5 bits: 41.2 E(): 0.00039 Smith-Waterman score: 187; 47.917% identity (48.936% ungapped) in 48 aa overlap (1831-1877:120-167) 1810 1820 1830 1840 1850 1860 mKIAA0 QPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHHCRRCGRLVCGSCSTKKM : .: . .:.::::.::::.: .::::.. mKIAA1 YQVATKQLLFRLLDMLSKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCSTKEI 90 100 110 120 130 140 1870 1880 1890 1900 1910 mKIAA0 VVEGFREN-PTRVCDQCYSYYNKDTPEESPCQSEVPDSAKNESPPYSAVVRVPKATEVEW . : : :.:::. :.. mKIAA1 PIIKFDLNKPVRVCNICFDVLTLGGVS 150 160 170 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 227 init1: 110 opt: 188 Z-score: 158.4 bits: 42.4 E(): 0.0011 Smith-Waterman score: 188; 40.000% identity (42.623% ungapped) in 65 aa overlap (1817-1879:1101-1163) 1790 1800 1810 1820 1830 1840 mKIAA0 VRSPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVC-CREHFTMFNRRHHCR .::::. : :. : :. : . .:::::: mKIAA0 DTEDFGSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCE--FWLAKRRHHCR 1080 1090 1100 1110 1120 1850 1860 1870 1880 1890 1900 mKIAA0 RCGRLVC-GSCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEESPCQSEVPDSAKNESPP :: . : : : : . . .:. ::..:: . mKIAA0 NCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYEHIQVSRARELMSQHLKKPIATASS 1130 1140 1150 1160 1170 1180 1910 1920 1930 1940 1950 1960 mKIAA0 YSAVVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLI >>mFLJ00274 ( 1530 res) mpf00869 (1530 aa) initn: 150 init1: 150 opt: 183 Z-score: 153.0 bits: 41.8 E(): 0.0022 Smith-Waterman score: 183; 32.967% identity (36.585% ungapped) in 91 aa overlap (1819-1902:1307-1395) 1790 1800 1810 1820 1830 1840 mKIAA0 SPSPKERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVC-CREHFTMFNRRHHCRRC :: .:: : : :.. :::::. : mFLJ00 YKTQALAAFHHSVEIRERLGISLGERLPTLVPVTHAMMCMNCGC--DFSLTVRRHHCHAC 1280 1290 1300 1310 1320 1330 1850 1860 1870 1880 1890 1900 mKIAA0 GRLVCGSCSTKKMVVEGFRENPTRVCDQCY---SYYNKDTP---EESPCQSEVPDSAKNE :..:: .:: .:. .. ... ..::: :. . : .: .: : . : :.. mFLJ00 GKIVCRNCSRNKYPLKCLKNRMAKVCDGCFRELKLRNGPVPGSMRERPVSMSFPLSSSRF 1340 1350 1360 1370 1380 1390 1910 1920 1930 1940 1950 1960 mKIAA0 SPPYSAVVRVPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGH : mFLJ00 SSGSALSSVFQSISPSTFKKQKKVPSALSEVAASGEGSAISGYLSRCKSGKRRWKKLWLV 1400 1410 1420 1430 1440 1450 2548 residues in 1 query sequences 1766469 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:17:38 2006 done: Mon Mar 27 10:17:41 2006 Scan time: 1.740 Display time: 0.810 Function used was FASTA [version 3.4t11 Apr 17, 2002]